Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168228.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26068

Tables:   1   

This is table  1  of  1  ( 59 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1634--1666
15
2.2
15
100
0
66
45
6
0
48
1.27
1649--1910
78
3.2
78
76
16
301
41
14
8
35
1.76
1727--1759
15
2.2
15
100
0
66
45
6
0
48
1.27
1561--1837
93
3.0
93
100
0
554
41
14
7
36
1.74
3716--3753
18
2.1
18
100
0
76
34
15
21
28
1.94
4071--4304
18
13.1
18
96
3
397
50
12
14
22
1.76
4319--4658
30
11.3
30
100
0
680
36
23
23
16
1.94
6748--6871
45
2.9
44
89
8
186
24
0
4
70
1.09
6781--6858
13
6.5
13
79
19
82
23
0
5
71
1.05
6744--6871
4
32.2
4
70
22
85
24
0
3
71
1.08
6883--7006
35
3.3
35
84
14
176
48
1
0
50
1.10
6896--7003
42
2.6
42
91
5
166
50
0
0
49
1.07
6896--7053
77
2.1
77
82
7
187
51
2
1
44
1.23
6883--7071
17
10.4
18
68
17
79
51
2
1
44
1.22
7083--7138
19
2.9
19
86
2
67
67
0
5
26
1.11
7102--7177
19
4.1
18
82
11
91
64
2
7
25
1.34
7122--7175
18
2.9
19
88
2
83
61
3
7
27
1.40
7172--7205
17
2.0
17
94
0
59
61
8
0
29
1.26
7204--7253
15
3.1
15
84
15
73
60
8
0
32
1.26
7207--7244
18
2.1
18
100
0
76
63
10
0
26
1.27
7340--7391
25
2.1
25
96
0
95
50
15
13
21
1.78
7430--7478
17
2.9
16
80
17
55
77
2
6
14
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8426--8476
22
2.4
22
93
3
86
37
7
3
50
1.50
11903--11935
16
2.1
16
100
0
66
30
0
0
69
0.88
11893--11963
21
3.3
21
86
9
99
36
0
0
63
0.95
11895--11959
13
4.7
13
82
17
78
36
0
0
63
0.95
12142--12219
10
7.6
10
80
13
63
32
7
0
60
1.25
12144--12211
27
2.5
26
86
6
100
30
8
0
60
1.27
12170--12212
11
4.0
11
93
6
79
27
9
0
62
1.25
12210--12267
20
2.8
21
81
7
64
27
13
1
56
1.47
12140--12261
21
6.0
21
79
14
73
28
12
0
58
1.40
12142--12226
21
3.5
24
78
18
95
30
9
0
60
1.29
12253--12286
17
2.0
17
100
0
68
35
11
0
52
1.38
16857--16941
22
4.1
22
81
15
119
47
8
5
38
1.58
16884--16972
17
5.0
17
83
15
117
47
10
6
35
1.64
16862--16958
39
2.5
38
96
1
176
47
9
6
37
1.61
17188--17231
22
2.0
22
100
0
88
45
4
18
31
1.69
18111--18222
36
3.1
36
94
0
197
35
25
11
27
1.90
18182--18414
42
5.4
43
80
8
186
31
20
10
38
1.86
18268--18666
21
19.0
21
79
3
354
28
19
10
41
1.84
18182--18456
84
3.2
84
78
5
300
30
20
10
39
1.85
18289--18666
105
3.6
104
81
2
452
28
19
10
41
1.84
18268--18688
147
2.9
147
84
1
619
29
19
10
40
1.85
18739--18930
24
8.0
24
100
0
384
20
33
16
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18917--19010
36
2.6
36
98
0
179
35
23
12
28
1.92
19226--19450
36
6.2
36
99
0
441
28
19
10
41
1.85
19703--19738
18
2.0
18
100
0
72
27
22
5
44
1.75
20322--20370
23
2.1
23
96
0
89
46
18
4
30
1.67
22131--22167
17
2.2
17
100
0
74
24
16
0
59
1.37
22255--22339
7
10.5
8
74
22
63
61
0
1
37
1.04
22292--22336
11
4.3
11
77
11
58
64
0
0
35
0.94
22255--22327
26
2.8
28
78
15
77
60
0
1
38
1.06
22290--22338
9
5.2
9
79
15
55
67
0
0
32
0.91
22263--22345
20
4.3
20
77
17
86
60
1
1
37
1.12
22424--22495
23
3.1
21
75
16
63
66
1
8
23
1.27
22353--22493
61
2.4
57
80
11
137
60
4
7
27
1.44
22440--22473
17
2.1
17
94
5
61
70
0
5
23
1.09
22748--22789
11
3.9
11
84
6
59
57
9
19
14
1.64
22748--22789
21
2.0
21
100
0
84
57
9
19
14
1.64

Tables:   1

The End!