Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168232.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_465, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25980

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--105
19
5.2
19
73
23
81
58
0
9
32
1.31
20--103
10
8.8
10
79
20
92
58
0
9
32
1.30
33--97
16
3.9
16
90
10
87
58
0
9
32
1.30
2--103
35
2.9
35
85
11
120
57
0
9
32
1.31
276--345
13
5.5
13
83
16
85
64
0
0
35
0.94
276--338
21
3.2
21
86
13
98
65
0
0
34
0.93
3766--3816
22
2.4
22
93
3
86
50
3
7
37
1.50
4851--4902
25
2.1
25
96
0
95
21
13
15
50
1.78
4856--4909
25
2.2
25
86
0
72
24
12
20
42
1.87
4988--5037
15
3.1
15
84
15
73
32
0
8
60
1.26
4997--5034
18
2.1
18
100
0
76
26
0
10
63
1.27
5036--5069
17
2.0
17
94
0
59
29
0
8
61
1.26
5071--5120
19
2.6
19
93
0
82
28
6
4
62
1.37
5104--5158
19
2.8
19
86
2
65
27
5
0
67
1.12
5066--5140
38
2.0
38
84
5
98
25
8
2
64
1.34
5171--5359
17
10.4
18
69
17
79
44
1
2
51
1.22
5240--5346
8
12.6
8
73
14
72
49
0
0
49
1.07
5201--5359
77
2.1
76
84
5
205
45
1
3
49
1.25
5236--5359
35
3.3
35
86
12
176
50
0
1
48
1.10
5371--5498
4
32.2
4
70
24
85
71
3
0
24
1.08
5384--5461
13
6.5
13
79
19
82
71
5
0
23
1.05
5377--5494
45
2.7
44
90
6
186
71
4
0
23
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7582--7921
30
11.3
30
100
0
680
16
23
23
36
1.94
7935--8169
18
13.1
18
96
3
397
22
14
12
50
1.76
8487--8524
18
2.1
18
100
0
76
28
21
15
34
1.94
10332--10500
78
2.2
78
97
0
320
35
8
15
40
1.77
10483--10515
15
2.2
15
100
0
66
48
0
6
45
1.27
10576--10608
15
2.2
15
100
0
66
48
0
6
45
1.27
10405--10681
93
3.0
93
100
0
554
36
7
14
41
1.74
13061--13128
21
3.4
20
82
13
86
61
0
0
38
0.96
13069--13126
6
10.0
6
85
10
77
65
0
0
34
0.93
13061--13126
27
2.5
26
87
9
89
63
0
0
36
0.95
15068--15113
23
2.0
23
100
0
92
26
21
4
47
1.69
20597--20640
21
2.1
21
100
0
88
22
9
13
54
1.67
20597--20648
21
2.5
21
90
6
70
26
7
11
53
1.63
20819--20896
20
4.0
20
83
6
115
65
0
5
29
1.14
20820--20892
38
1.9
38
100
0
146
69
0
5
24
1.09
21128--21191
24
2.6
25
90
5
103
57
0
0
42
0.98
21127--21165
18
2.2
18
100
0
78
56
0
0
43
0.99
21173--21200
14
2.0
14
100
0
56
57
0
0
42
0.99
21131--21205
18
4.1
18
74
19
73
60
0
0
40
0.97
23357--23386
15
2.0
15
100
0
60
20
13
13
53
1.72
23968--23998
14
2.2
14
100
0
62
29
12
6
51
1.65
25284--25324
18
2.3
18
95
0
73
53
4
4
36
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25519--25980
181
2.6
182
95
3
855
44
11
12
30
1.78

Tables:   1

The End!