Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168236.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25748

Tables:   1   

This is table  1  of  1  ( 62 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105--166
27
2.3
27
81
8
74
46
0
3
50
1.17
118--169
16
3.2
17
81
10
65
48
0
3
48
1.20
1344--1430
24
3.8
24
70
18
58
43
3
1
51
1.26
1419--1457
19
2.1
19
85
9
53
46
0
0
53
1.00
1475--1536
23
2.6
25
82
12
69
56
0
1
41
1.09
1508--1571
15
4.2
16
78
7
64
50
0
1
48
1.10
1499--1535
15
2.4
16
90
4
58
56
0
0
43
0.99
1629--1704
29
3.0
24
72
20
66
43
2
1
52
1.23
2966--3020
23
2.4
22
81
9
56
52
1
1
43
1.22
5020--5062
20
2.2
20
83
8
52
51
0
2
46
1.13
5105--5163
16
3.2
16
75
25
55
52
1
0
45
1.10
5105--5192
21
4.4
21
67
23
64
48
2
1
47
1.21
5082--5150
27
2.6
27
83
4
77
55
2
0
42
1.15
5383--5441
13
4.8
12
75
17
50
47
5
0
47
1.24
5361--5454
9
10.3
9
72
16
52
42
3
1
53
1.24
6549--6590
20
2.2
18
87
8
57
59
0
2
38
1.10
6548--6598
13
3.8
13
77
12
50
58
0
1
39
1.09
8279--8325
25
1.9
24
82
4
58
38
2
2
57
1.23
8314--8352
19
2.1
19
85
9
53
46
0
0
53
1.00
8365--8432
24
2.8
24
82
12
77
54
0
1
44
1.09
8394--8431
16
2.4
16
90
0
58
55
0
0
44
0.99
8403--8466
16
4.3
15
78
9
60
50
0
1
48
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8524--8599
29
3.0
24
72
20
66
43
2
1
52
1.23
9861--9915
23
2.4
22
81
9
56
52
1
1
43
1.22
11979--12065
26
3.4
25
74
16
81
56
2
0
41
1.12
11995--12048
3
17.0
3
85
11
63
59
1
0
38
1.08
11995--12056
12
5.2
12
80
12
58
58
1
0
40
1.08
12264--12341
12
6.4
12
73
15
63
42
3
0
53
1.19
12263--12355
9
10.3
9
71
16
50
41
3
1
53
1.24
13434--13499
14
4.7
13
75
18
53
57
1
1
39
1.17
13907--13968
27
2.3
27
81
8
74
46
0
3
50
1.17
13920--13971
16
3.2
17
81
10
65
48
0
3
48
1.20
15147--15233
24
3.8
24
70
18
58
43
3
1
51
1.26
15222--15260
19
2.1
19
85
9
53
46
0
0
53
1.00
15278--15339
23
2.6
25
82
12
69
56
0
1
41
1.09
15311--15374
15
4.2
16
78
7
64
50
0
1
48
1.10
15302--15338
15
2.4
16
90
4
58
56
0
0
43
0.99
15432--15507
29
3.0
24
72
20
66
43
2
1
52
1.23
16769--16823
23
2.4
22
81
9
56
52
1
1
43
1.22
18819--18861
20
2.2
20
83
8
52
51
0
2
46
1.13
18826--18973
51
2.9
51
77
16
130
51
2
0
45
1.17
18903--18956
3
17.0
3
85
11
63
59
1
0
38
1.08
18903--18964
9
6.3
10
83
12
76
58
1
0
40
1.08
19195--19253
13
4.8
12
75
17
50
47
5
0
47
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19173--19266
9
10.3
9
72
16
52
42
3
1
53
1.24
20361--20402
20
2.2
18
87
8
57
59
0
2
38
1.10
20360--20410
13
3.8
13
77
12
50
58
0
1
39
1.09
20813--20874
27
2.3
27
81
8
74
46
0
3
50
1.17
20826--20877
16
3.2
17
81
10
65
48
0
3
48
1.20
21737--21770
17
1.9
17
88
5
50
41
0
2
55
1.15
22047--22134
24
3.8
24
69
18
60
43
3
1
52
1.25
22123--22164
21
2.0
21
86
9
59
47
0
0
52
1.00
22181--22241
23
2.7
23
82
14
65
55
0
1
42
1.09
22213--22276
15
4.2
16
78
7
64
50
0
1
48
1.10
22204--22240
15
2.4
16
90
4
58
56
0
0
43
0.99
23221--23259
17
2.4
16
84
12
53
43
0
5
51
1.24
23673--23726
25
2.3
24
78
12
58
51
1
1
44
1.22
23675--23726
23
2.2
22
83
10
59
51
1
1
44
1.23
24158--24194
14
2.6
15
83
12
51
54
0
2
43
1.14
24620--24655
14
2.8
13
91
8
56
44
0
0
55
0.99
25397--25451
23
2.6
19
76
20
56
47
0
5
47
1.25
25644--25673
12
2.6
11
90
10
51
43
0
3
53
1.17

Tables:   1

The End!