Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168240.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25713

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1339--1384
18
2.6
17
77
12
56
41
2
2
54
1.25
3528--3588
32
1.9
32
83
6
79
13
3
1
81
0.88
3538--3650
19
5.9
18
76
17
97
15
1
1
80
0.88
3554--3645
44
2.1
40
79
15
85
15
2
2
80
0.91
4719--4795
5
14.8
5
75
20
61
14
5
2
77
1.04
4721--4796
32
2.4
30
82
10
91
14
6
2
76
1.10
4719--4796
27
2.8
28
78
7
77
14
6
2
76
1.08
4814--5330
59
8.7
59
80
9
543
43
7
13
35
1.72
4812--5330
119
4.4
117
81
7
573
44
7
13
35
1.72
4813--5330
178
2.9
177
86
6
699
44
7
13
35
1.72
5205--5244
16
2.4
17
83
8
55
50
5
0
45
1.23
4814--5347
240
2.2
238
82
5
600
44
8
12
34
1.72
14035--14071
10
4.0
10
83
16
53
81
0
8
10
0.89
14035--14070
18
2.0
18
94
0
63
80
0
8
11
0.90
15065--15254
41
4.6
41
97
1
362
23
16
23
36
1.94
15234--15274
20
2.0
20
100
0
82
29
19
12
39
1.88
15192--15315
61
2.0
62
95
1
223
24
16
20
38
1.93
15254--15380
41
3.0
41
90
2
182
22
18
23
35
1.96
15387--15421
14
2.4
15
90
9
63
88
11
0
0
0.51
15570--15624
1
55.0
1
77
0
56
7
1
1
89
0.63
15577--15624
13
3.5
13
88
11
69
8
0
2
89
0.56
15566--15666
23
4.5
22
78
10
89
15
1
1
80
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15566--15633
13
4.9
13
81
12
64
11
1
1
85
0.74
15566--15666
16
6.7
15
77
13
93
15
1
1
80
0.90
15719--15865
17
8.9
16
67
21
63
19
3
4
73
1.14
15783--15867
6
14.5
6
73
16
63
14
4
2
78
1.00
15790--15869
28
2.8
29
86
7
101
15
3
2
78
0.99
15928--16110
59
3.1
58
86
7
242
42
6
13
37
1.71
15947--16150
59
3.4
60
82
10
177
44
7
12
35
1.70
19925--20438
181
2.8
181
77
11
476
41
11
7
39
1.71
21495--21531
18
2.1
18
89
0
56
54
0
0
45
1.00
21560--22002
182
2.4
181
79
4
435
38
10
8
42
1.69
21427--22263
181
4.6
180
73
10
504
40
8
8
43
1.65
21980--22355
181
2.1
180
78
7
404
40
7
7
43
1.61
22233--22505
151
1.8
151
83
3
370
40
7
9
42
1.66
22358--23000
180
3.6
174
77
7
540
41
9
9
39
1.70
22842--23142
158
1.9
158
82
6
383
40
10
11
36
1.76
23072--23501
186
2.3
179
78
10
433
43
8
10
37
1.69
23077--24344
180
7.0
180
74
9
859
41
9
8
40
1.68
24179--24504
158
2.1
157
81
4
379
41
9
8
41
1.67
23866--24862
515
1.9
517
80
6
1144
42
9
7
40
1.67
24908--25227
176
1.8
176
81
4
403
42
10
9
37
1.72

Tables:   1

The End!