Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168246.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25518

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1617--1656
20
2.0
20
90
5
62
40
12
22
25
1.89
2781--2825
21
2.2
21
84
11
58
40
0
6
53
1.27
2813--2846
14
2.4
14
90
5
50
32
0
8
58
1.29
2811--2851
15
2.7
15
85
11
57
31
0
7
60
1.24
2869--2910
20
2.1
20
91
8
68
28
2
7
61
1.35
3627--3683
20
2.7
21
86
8
89
24
5
7
63
1.41
5214--5239
4
6.5
4
100
0
52
76
0
0
23
0.78
9974--10002
2
14.5
2
100
0
58
48
0
0
51
1.00
10790--10860
30
2.4
30
73
2
72
36
8
7
47
1.61
11022--11053
7
4.6
7
100
0
64
28
12
0
59
1.34
11480--11640
55
2.9
55
75
4
171
29
13
13
43
1.82
11406--11709
159
1.9
158
81
7
364
27
16
12
43
1.84
11639--11813
55
3.2
55
79
4
165
28
14
11
46
1.79
12022--12062
21
1.9
22
85
5
57
51
17
2
29
1.58
12104--12132
15
1.9
15
100
0
58
62
17
6
13
1.52
12105--12140
15
2.4
15
90
0
54
69
13
2
13
1.30
20154--20414
109
2.4
107
80
5
285
36
16
15
31
1.90
23076--23108
17
1.9
17
100
0
66
39
12
12
36
1.80
23933--23979
24
1.9
25
82
4
60
25
2
17
55
1.53

Tables:   1

The End!