Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167869.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_138, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68123

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6404--6430
3
9.0
3
100
0
54
66
0
33
0
0.92
9374--9417
22
2.0
22
95
0
79
40
6
13
38
1.71
11755--11812
26
2.3
24
79
5
62
41
8
3
46
1.51
11772--11826
25
2.2
25
83
9
67
40
5
5
49
1.49
20300--20342
22
2.0
22
90
0
68
13
9
11
65
1.48
20300--20334
11
3.2
11
87
0
52
17
8
8
65
1.44
20396--20434
20
2.0
20
94
0
69
23
5
10
61
1.48
20437--20478
14
2.9
15
79
10
52
26
0
14
59
1.35
31479--31522
22
2.0
23
90
4
72
36
4
0
59
1.18
32354--32396
19
2.4
18
92
7
70
86
4
4
4
0.80
34431--34464
2
17.0
2
93
0
59
47
0
2
50
1.16
38932--38978
20
2.3
20
92
0
76
25
25
8
40
1.84
42739--42836
41
2.5
38
76
16
92
44
3
1
51
1.24
42985--43023
17
2.3
16
83
12
51
48
5
2
43
1.38
43204--43262
27
2.3
26
78
16
68
45
3
0
50
1.18
43813--43837
13
1.9
13
100
0
50
52
24
8
16
1.70
44536--44563
3
9.3
3
100
0
56
64
0
0
35
0.94
45786--45826
19
2.3
18
87
8
57
48
0
7
43
1.30
45917--45953
18
2.0
19
89
5
58
45
0
0
54
1.00
45920--45958
19
2.1
18
90
4
60
48
0
0
51
1.00
47142--47200
22
2.8
22
82
12
70
77
13
1
6
1.03
47170--47232
29
2.1
30
85
8
85
79
12
4
3
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47101--47231
36
3.6
37
72
16
94
74
12
3
9
1.20
48260--48302
22
1.9
23
85
4
61
41
0
9
48
1.35
60009--60088
9
8.9
9
79
4
63
81
3
6
8
0.98
60009--60088
18
4.4
18
76
10
83
81
3
6
8
0.98
60009--60086
27
2.9
26
86
5
102
80
3
6
8
1.00
60011--60058
8
5.8
8
80
9
51
79
6
6
8
1.07
60019--60089
10
7.7
10
83
12
82
80
2
5
11
0.99
60019--60087
18
3.8
18
83
11
88
81
2
5
10
0.97
61164--61967
36
23.0
35
65
21
209
20
22
13
43
1.87
61122--62023
71
12.8
72
87
7
1254
20
22
13
43
1.87
61122--61747
35
18.0
31
68
21
178
20
23
13
42
1.87
61122--62023
143
6.4
144
86
8
1254
20
22
13
43
1.87
61720--61822
34
3.1
32
69
23
86
24
21
9
44
1.82
61122--62022
349
2.6
350
89
5
1305
20
22
13
43
1.87
61128--62023
278
3.2
280
87
7
1277
20
22
13
42
1.87
62457--62515
10
5.5
11
72
23
54
77
8
0
13
0.97
62441--62493
26
2.0
26
85
0
70
71
11
1
15
1.22
63565--63607
22
1.9
23
85
4
61
41
0
9
48
1.35
65602--65633
3
10.7
3
93
0
55
31
3
0
65
1.08
65934--66300
198
1.9
196
85
7
512
35
11
7
45
1.69
67081--67114
12
2.7
13
86
4
52
70
2
0
26
1.01
67821--67860
15
2.5
17
80
19
50
55
0
15
30
1.41

Tables:   1

The End!