Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168272.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_500, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24815

Tables:   1   

This is table  1  of  1  ( 85 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2511--2557
18
2.6
17
80
12
51
57
0
2
40
1.11
2751--2784
16
2.1
16
88
0
50
50
0
0
50
1.00
2756--2834
34
2.4
34
83
12
101
48
0
2
49
1.14
2819--2886
22
3.1
22
75
10
68
55
2
1
39
1.24
2943--3006
14
4.5
15
78
21
50
46
1
1
50
1.20
2943--2982
19
2.0
21
90
9
66
45
2
0
52
1.14
2962--3023
22
2.6
26
76
21
73
50
0
3
46
1.17
3402--3479
21
3.7
21
68
14
63
53
3
1
41
1.27
3645--3676
13
2.5
13
100
0
64
59
0
0
40
0.97
3692--3760
29
2.4
27
75
13
66
42
4
2
50
1.37
3956--3996
16
2.5
16
88
4
55
48
2
2
46
1.28
4618--4661
14
3.1
14
81
12
54
52
2
0
45
1.13
4618--4675
28
2.0
29
83
9
75
46
1
0
51
1.11
6027--6077
16
3.1
16
80
11
59
43
5
0
50
1.26
6664--7104
179
2.5
181
79
8
454
41
11
7
39
1.71
6485--7172
182
3.8
177
75
10
574
41
11
8
39
1.70
7490--7562
31
2.4
32
82
11
82
38
2
2
56
1.28
8203--8245
11
3.8
11
87
6
68
44
0
0
55
0.99
8195--8415
23
8.7
24
66
25
84
49
1
0
47
1.18
8308--8372
19
3.5
20
76
17
61
47
0
0
52
1.00
8191--8375
28
7.0
28
67
22
100
48
1
1
49
1.18
8337--8394
28
2.1
27
81
12
64
48
1
0
50
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8512--8564
21
2.5
21
77
17
56
43
0
0
56
0.99
8638--8683
15
3.1
15
82
11
51
50
2
0
47
1.13
9001--9068
19
3.7
19
75
15
72
44
0
2
52
1.16
8994--9089
33
2.9
32
74
19
90
43
1
3
52
1.24
9224--9309
25
3.4
26
72
18
74
50
3
1
45
1.26
9232--9309
27
3.0
25
77
17
70
50
3
1
44
1.28
9311--9359
13
3.8
13
84
13
57
44
2
4
48
1.33
9311--9360
25
2.0
26
84
11
68
46
2
4
48
1.32
9326--9370
13
3.5
13
84
3
56
48
0
2
48
1.13
9336--9421
31
2.8
29
76
11
73
48
1
2
47
1.22
9443--9493
26
2.0
25
88
3
75
50
1
0
47
1.12
9452--9566
53
2.1
56
83
15
143
46
0
1
50
1.17
9566--10068
180
2.8
179
77
9
442
43
9
7
39
1.65
10070--10131
17
3.4
17
72
20
61
37
3
8
51
1.48
10071--10143
22
3.5
21
69
27
66
36
4
8
50
1.51
10627--10665
19
2.1
19
90
0
60
53
5
0
41
1.23
10688--10774
28
3.5
25
75
23
78
55
1
0
43
1.07
10716--10798
22
3.7
22
76
12
71
53
2
0
44
1.13
10875--10980
18
5.3
18
73
23
63
51
0
0
47
1.07
10875--10997
11
10.5
11
68
25
51
51
0
0
47
1.06
10875--10997
19
5.8
22
71
21
70
51
0
0
47
1.06
10879--10980
42
2.5
41
77
14
104
50
0
0
48
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11471--11501
14
2.3
13
94
5
53
45
0
3
51
1.17
12066--12122
19
2.8
20
77
17
64
47
3
0
49
1.18
12270--12320
26
2.0
24
85
11
66
54
1
0
43
1.11
12786--13614
180
4.6
180
84
4
914
39
10
8
41
1.70
12786--13657
181
4.9
180
83
4
928
39
9
9
41
1.70
13508--13806
153
2.0
149
83
6
379
39
8
8
44
1.63
14341--14389
22
2.2
22
92
0
80
46
2
0
51
1.12
14676--14735
30
2.0
31
83
9
79
48
1
3
46
1.28
16687--16747
16
3.6
17
80
14
65
37
0
4
57
1.20
16876--17467
180
3.3
179
77
7
474
39
9
8
42
1.68
17986--18031
19
2.3
20
82
14
60
45
0
4
50
1.21
18761--18795
18
1.9
18
94
0
61
54
0
0
45
0.99
18763--18838
25
3.1
25
79
9
77
52
3
0
43
1.19
18776--18822
13
3.6
14
78
18
57
51
4
0
44
1.21
18754--18844
47
2.0
44
81
12
103
53
4
0
41
1.21
18913--18948
18
1.9
19
88
5
56
55
2
2
38
1.29
19605--19647
22
2.0
21
86
4
59
55
2
2
39
1.25
19653--19693
10
4.3
10
81
9
50
56
0
2
41
1.13
19867--19912
24
1.9
24
86
0
65
41
2
4
52
1.33
19983--20016
16
2.1
16
94
0
59
47
0
0
52
1.00
20162--20201
15
2.6
16
84
15
57
45
2
0
52
1.14
20318--20867
181
3.0
180
75
9
508
40
9
9
41
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20952--21002
19
2.5
20
79
20
61
47
0
0
52
1.00
20944--21026
29
3.0
29
73
18
77
50
1
0
48
1.08
20963--21029
16
4.4
16
72
20
63
50
1
0
47
1.10
20970--21043
16
4.3
17
70
24
57
51
2
0
45
1.15
20958--20995
12
2.9
13
84
7
51
44
0
0
55
0.99
20998--21036
18
2.3
16
83
12
51
56
5
0
38
1.22
21159--21243
37
2.2
38
82
14
95
43
1
5
49
1.34
21326--21818
176
2.8
175
76
8
437
38
7
10
43
1.68
21998--22022
13
1.9
13
100
0
50
40
4
0
56
1.18
22041--22076
18
1.9
19
88
5
56
44
0
0
55
0.99
22394--22437
15
2.8
16
80
19
56
56
0
4
38
1.20
22392--22440
23
2.2
22
82
10
55
55
0
4
40
1.19
22797--22874
12
6.0
13
71
19
56
53
0
1
44
1.08
22797--22873
34
2.1
39
83
11
101
53
0
1
45
1.08
23216--23288
20
3.6
20
75
12
53
42
4
0
53
1.20
23356--23421
26
2.4
27
75
12
73
48
0
0
51
1.00
23358--23406
21
2.3
22
79
13
57
48
0
0
51
1.00
23817--23851
10
3.7
10
85
14
56
48
0
0
51
1.00
24665--24747
24
3.3
24
77
17
80
49
1
1
48
1.16

Tables:   1

The End!