Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168286.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24422

Tables:   1   

This is table  1  of  1  ( 78 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
665--737
19
3.6
20
80
12
69
39
1
1
57
1.16
915--965
27
1.9
26
92
4
84
47
0
3
49
1.20
991--1026
18
2.0
18
88
0
54
44
0
0
55
0.99
1016--1081
28
2.3
29
82
12
84
48
0
1
50
1.10
1063--1095
14
2.4
14
94
0
57
51
0
0
48
1.00
1329--1369
20
2.1
20
86
4
57
39
2
0
58
1.11
1515--2011
179
2.8
182
78
7
442
42
7
9
40
1.66
2232--2327
25
3.7
26
71
10
63
48
3
2
45
1.29
2231--2336
53
2.0
53
80
10
119
50
2
1
45
1.27
2264--2349
31
2.9
29
75
18
86
52
0
2
45
1.13
2429--2468
20
2.0
21
90
5
64
42
0
5
52
1.23
2441--2487
12
3.9
12
77
5
51
42
0
2
55
1.12
2839--2895
19
3.0
19
67
10
53
54
5
8
31
1.53
3443--3493
21
2.4
22
80
9
61
43
3
1
50
1.31
3443--3499
21
2.7
20
76
10
51
43
5
1
49
1.35
3683--3772
35
2.7
34
79
8
105
40
4
2
53
1.33
3722--3810
11
8.0
11
68
20
51
39
2
2
56
1.24
3759--3815
28
2.0
28
83
6
71
42
0
5
52
1.24
4089--4144
15
3.6
15
71
15
51
44
0
1
53
1.11
5112--5151
10
3.9
11
87
12
50
52
2
0
45
1.14
5119--5161
14
3.1
14
83
10
52
55
0
0
44
0.99
5138--5170
17
1.9
17
88
11
50
60
0
0
39
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5755--5797
18
2.4
19
80
11
54
41
4
2
51
1.35
6176--6253
11
7.0
12
69
15
60
44
0
1
53
1.08
7239--7283
22
2.0
22
86
0
63
48
4
2
44
1.35
7485--7551
12
5.8
12
76
10
50
47
0
5
46
1.27
7975--8029
14
4.0
14
77
11
60
38
1
0
60
1.08
8002--8053
22
2.4
22
83
0
68
50
1
0
48
1.12
10077--10101
13
1.9
13
100
0
50
40
8
0
52
1.31
10127--10181
21
2.6
22
77
16
62
45
3
9
41
1.53
10118--10199
21
4.0
19
72
17
58
43
2
7
46
1.44
10498--10540
18
2.4
18
76
0
50
48
0
2
48
1.14
10547--10596
18
2.7
19
84
12
68
50
2
0
48
1.12
10636--10674
20
2.0
20
85
14
55
35
5
2
56
1.35
11078--11102
11
2.3
11
100
0
50
52
0
0
48
1.00
11341--11398
19
3.0
19
78
11
64
60
0
0
39
0.97
11339--11397
25
2.4
25
82
5
75
57
0
0
42
0.98
11351--11409
14
4.4
14
77
12
61
57
0
0
42
0.98
11341--11410
17
3.9
17
82
14
79
58
0
0
41
0.98
11503--11585
19
4.3
19
73
19
66
45
2
3
48
1.33
11880--11914
17
2.1
17
94
0
61
62
0
0
37
0.95
12101--12137
18
2.1
18
90
5
58
45
2
5
45
1.40
12518--12572
27
2.0
27
85
0
74
52
1
0
45
1.11
12532--12589
23
2.5
22
81
10
62
50
1
0
48
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13380--13425
23
2.0
23
87
8
67
50
2
0
47
1.13
14041--14090
25
2.0
24
84
3
64
56
2
2
40
1.22
14131--14165
16
2.1
18
89
10
56
48
5
0
45
1.26
14345--14395
24
2.1
25
85
3
68
43
1
0
54
1.11
14489--14544
20
2.8
19
77
20
60
51
1
0
46
1.11
14653--14702
22
2.3
22
82
6
57
52
6
0
42
1.26
14878--14958
25
3.3
25
72
17
71
49
2
0
48
1.14
14893--14979
25
3.6
25
76
13
76
50
3
1
44
1.26
14987--15025
20
2.0
20
85
10
53
35
0
5
58
1.20
15928--15975
24
2.0
24
83
0
60
56
2
8
33
1.41
16017--16064
26
1.9
26
83
8
64
50
4
6
39
1.47
16539--16585
19
2.5
18
80
16
51
53
6
0
40
1.27
16574--16613
19
2.1
19
86
9
55
47
0
0
52
1.00
16656--16695
21
1.9
21
84
0
53
62
0
2
35
1.09
16877--16935
16
3.8
16
72
18
52
44
6
0
49
1.29
17044--17118
17
4.9
17
74
25
78
42
1
8
48
1.41
17026--17118
44
2.1
44
86
4
125
44
3
7
45
1.48
17098--17139
11
4.0
11
75
12
52
38
0
9
52
1.34
17309--17657
182
1.9
180
85
4
479
43
10
7
38
1.67
18554--18621
26
2.7
24
75
6
64
50
0
4
45
1.22
18651--18699
22
2.3
21
82
3
62
48
2
0
48
1.12
18764--18806
22
2.0
22
86
9
61
39
0
6
53
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19834--19887
28
1.9
28
85
7
74
53
0
1
44
1.11
19923--19964
11
3.7
12
81
12
52
47
0
0
52
1.00
19949--20008
14
3.9
16
80
16
56
58
3
0
38
1.15
20307--20917
182
3.3
180
79
9
532
39
8
9
43
1.67
21338--21393
19
2.9
18
82
10
67
46
0
0
53
1.00
22102--22162
20
3.0
21
86
11
74
40
0
4
54
1.22
22443--22488
18
2.5
19
79
10
51
39
2
0
58
1.10
22462--22505
17
2.5
18
85
10
56
45
0
0
54
0.99
22795--23797
537
1.9
539
84
2
1354
40
8
9
41
1.68
24125--24157
17
2.0
17
88
5
50
39
0
6
54
1.25
24213--24254
15
2.9
14
86
13
50
45
2
2
50
1.27
24321--24415
13
7.0
14
73
17
60
44
0
2
53
1.12

Tables:   1

The End!