Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168287.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24349

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
308--392
43
2.0
43
90
0
134
25
11
17
44
1.83
693--732
18
2.2
18
86
8
55
32
10
20
37
1.85
641--881
134
1.8
133
85
4
342
24
13
24
37
1.91
1806--1859
4
13.0
4
82
5
63
24
5
1
68
1.21
1815--1865
16
3.1
16
83
11
59
23
7
1
66
1.28
5259--5333
29
2.5
31
76
6
82
46
6
9
37
1.62
6273--6422
56
2.7
55
80
9
178
26
12
7
53
1.65
7005--7046
12
3.5
12
90
9
68
71
7
0
21
1.09
8235--8374
42
3.4
41
78
9
151
47
18
10
23
1.80
8243--8383
41
3.4
41
79
8
153
46
19
9
24
1.80
9275--9393
63
1.9
63
85
0
166
31
23
10
34
1.89
13406--13495
46
2.0
46
88
0
135
28
12
7
51
1.67
13799--13847
25
2.0
25
84
8
64
40
8
4
46
1.52
18645--18684
20
2.0
20
95
0
71
47
10
2
40
1.50
22680--22740
26
2.3
26
88
5
88
52
0
13
34
1.40

Tables:   1

The End!