Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167874.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66706

Tables:   1   

This is table  1  of  1  ( 55 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2161--2203
21
2.0
21
86
8
61
44
9
25
20
1.81
9843--9958
47
2.4
47
88
1
169
52
15
14
17
1.75
10781--11154
89
4.2
89
78
9
352
16
20
17
45
1.86
11557--11607
3
16.7
3
95
4
93
33
0
0
66
0.92
12047--12094
21
2.3
21
85
0
60
8
2
12
77
1.08
12172--12208
19
1.9
19
89
10
58
24
21
27
27
1.99
12571--12634
34
1.9
34
90
3
103
56
9
1
32
1.41
13304--13388
41
2.1
41
97
0
161
34
18
11
35
1.88
34235--34340
35
3.1
35
76
11
128
41
1
13
43
1.54
34245--34326
17
4.7
17
80
10
78
40
1
13
45
1.51
34701--34742
20
2.1
20
100
0
84
38
21
4
35
1.75
37959--38045
4
21.2
4
72
11
61
70
2
3
24
1.15
37986--38041
15
3.7
15
75
15
53
69
0
5
25
1.09
37955--38050
39
2.4
38
79
8
95
70
2
4
22
1.15
39433--39579
76
1.9
76
84
2
197
34
13
19
32
1.91
43144--43281
66
2.1
66
94
0
240
29
15
26
27
1.96
44240--44325
43
2.0
42
82
8
104
38
1
0
60
1.04
54152--54176
12
2.1
12
100
0
50
60
0
8
32
1.26
56357--56395
20
1.9
21
89
5
62
23
30
28
17
1.97
56439--56478
12
3.3
12
89
6
55
0
20
0
80
0.72
56480--56616
3
42.0
3
71
18
55
29
2
4
62
1.29
56480--56513
16
2.1
16
88
0
50
29
0
2
67
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56552--56614
14
4.4
14
79
16
51
33
0
4
61
1.17
56579--56616
14
2.7
14
92
8
60
34
0
0
65
0.93
57039--57076
14
2.7
14
95
0
67
7
2
23
65
1.32
57624--57665
4
10.5
4
85
10
59
23
0
0
76
0.79
57623--57694
34
2.2
32
85
5
90
26
1
2
69
1.10
57689--57753
11
6.4
10
75
21
55
15
4
0
80
0.88
57674--57742
23
2.8
24
80
14
70
17
4
0
78
0.91
57688--57738
14
3.3
15
86
8
68
13
3
0
82
0.81
57696--57743
21
2.3
21
86
10
71
14
2
0
83
0.74
57602--57758
16
9.5
16
71
12
70
19
3
3
73
1.10
57803--58117
114
2.7
116
88
5
440
46
8
11
33
1.71
57785--58117
58
5.7
58
82
12
317
46
8
11
33
1.71
61983--62045
10
6.3
10
76
18
60
80
0
12
6
0.88
61979--62036
19
3.0
20
90
7
84
75
0
15
8
1.02
61979--62035
20
2.9
19
85
14
73
75
0
15
8
1.04
62002--62055
28
1.9
28
96
0
99
79
0
14
5
0.90
61991--62045
20
2.8
20
86
13
80
81
0
12
5
0.84
61983--62053
9
7.3
10
82
9
76
78
0
14
7
0.94
61992--62045
19
2.8
19
91
5
83
81
0
12
5
0.85
63248--63458
41
5.1
41
91
5
302
21
18
24
35
1.96
63248--63458
83
2.6
83
89
5
313
21
18
24
35
1.96
63467--63580
1
114.0
1
83
0
138
91
7
0
0
0.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63467--63580
39
2.9
39
90
3
167
91
7
0
0
0.51
63467--63580
43
2.7
43
88
1
158
91
7
0
0
0.51
63777--63805
12
2.3
13
94
5
51
0
13
0
86
0.58
64908--65056
5
29.8
5
71
21
68
18
2
2
77
0.99
64921--65055
9
14.9
9
69
20
61
20
2
2
74
1.05
64922--64969
4
11.5
4
80
14
53
22
0
0
77
0.78
64993--65056
11
6.4
10
77
15
53
14
4
0
81
0.85
64982--65056
11
6.2
12
70
26
52
16
5
0
78
0.92
65073--65534
57
7.9
57
81
12
420
46
8
11
33
1.70
65064--65534
239
2.0
232
86
8
668
47
8
11
32
1.69
66401--66435
17
2.1
17
89
10
54
25
8
0
65
1.21

Tables:   1

The End!