Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168316.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23611

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1152--1210
22
2.4
25
81
18
88
35
8
10
45
1.68
1161--1205
22
2.0
22
100
0
90
37
8
8
44
1.67
2797--2856
3
20.0
3
100
0
120
66
0
0
33
0.92
6151--6175
12
2.1
12
100
0
50
0
28
0
72
0.86
6412--6457
23
2.0
24
91
4
76
65
6
2
26
1.28
6668--6698
15
2.1
14
94
5
53
12
3
0
83
0.75
6913--7018
44
2.5
42
80
11
133
47
11
13
28
1.77
7280--7328
20
2.4
21
82
3
64
34
22
10
32
1.88
7530--7610
25
3.5
23
79
11
85
37
13
9
39
1.78
8795--8840
23
2.0
22
88
12
67
8
21
0
69
1.15
8798--8840
22
2.0
22
86
9
61
9
20
0
69
1.15
8848--8893
16
2.9
15
84
9
56
4
21
0
73
1.00
8858--8907
16
3.1
16
80
13
57
6
18
0
76
0.99
9280--9311
16
1.9
17
93
6
57
0
9
0
90
0.45
11215--11249
18
1.9
18
88
0
52
40
20
8
31
1.82
11465--11494
14
2.1
15
93
6
53
23
0
13
63
1.29
13030--13397
198
1.9
196
79
10
419
33
10
7
48
1.65
14009--14033
10
2.5
10
100
0
50
60
8
0
32
1.26
14140--14669
268
2.0
264
96
1
970
33
20
8
37
1.84
16416--16448
17
1.9
17
93
0
57
39
21
0
39
1.53
16987--17019
2
17.0
2
93
6
59
48
0
0
51
1.00
18565--18641
26
2.9
27
67
11
77
16
23
5
54
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18697--18769
36
2.0
36
94
0
128
41
10
10
36
1.76

Tables:   1

The End!