Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168319.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23575

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
361--424
30
2.1
30
100
0
128
42
12
15
29
1.84
15086--15417
49
6.9
49
76
6
293
30
12
18
38
1.88
15118--15409
96
3.0
94
79
9
288
30
12
17
39
1.87
15456--15914
172
2.7
172
80
2
440
30
16
15
38
1.89
15464--15914
214
2.1
215
97
0
850
29
16
15
38
1.90
15464--15914
43
10.5
43
77
3
372
29
16
15
38
1.90
16125--16160
3
12.0
3
100
0
72
33
0
0
66
0.92
17050--17084
17
2.1
17
89
10
54
65
0
8
25
1.21
17953--18407
58
7.7
59
78
13
445
32
12
7
47
1.70
17953--18409
175
2.6
173
85
8
580
32
12
7
47
1.70
18448--18587
9
14.2
9
71
19
70
77
2
2
17
1.00
18438--18509
23
3.0
24
82
10
85
79
0
6
13
0.93
18454--18504
14
3.3
16
81
13
63
82
0
5
11
0.83
18448--18587
5
28.4
5
72
24
63
77
2
2
17
1.00
18527--18574
4
11.5
4
79
16
53
77
0
0
22
0.78
18439--18585
38
4.0
36
72
15
120
76
2
3
18
1.03
19100--19143
13
3.1
14
87
9
63
68
20
2
9
1.28
19112--19143
13
2.5
13
100
0
64
75
18
0
6
1.01
19458--19510
22
2.4
23
74
22
60
67
7
3
20
1.31
19566--19702
3
42.0
3
71
18
55
64
3
2
29
1.23
19566--19702
16
7.6
16
72
18
76
64
3
2
29
1.23
19786--19824
20
1.9
21
89
5
62
17
28
30
23
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19919--20042
1
124.0
1
74
0
104
1
1
9
87
0.69
19919--20044
12
9.6
13
80
13
118
1
1
10
86
0.71
19913--20033
28
4.1
29
77
14
124
2
2
9
85
0.79
19919--20042
44
2.9
41
83
14
155
1
1
9
87
0.69
19919--20044
65
1.9
67
87
6
186
1
1
10
86
0.71
20051--20261
41
5.1
41
93
3
336
34
24
18
22
1.96
21447--21520
10
7.3
10
77
8
69
6
13
0
79
0.91
21455--21500
11
4.1
11
83
10
58
2
10
0
86
0.64
21447--21520
30
2.4
31
91
6
116
6
13
0
79
0.91
21464--21528
20
3.1
20
76
14
60
9
15
0
75
1.04

Tables:   1

The End!