Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168323.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23359

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
170--237
13
5.5
13
78
15
65
63
0
0
36
0.95
170--239
20
3.3
20
79
16
79
62
0
0
37
0.95
170--230
7
8.6
7
76
16
63
63
0
0
36
0.94
178--235
17
3.2
17
76
16
55
63
0
0
36
0.94
3658--3708
22
2.4
22
93
3
86
50
3
7
37
1.50
4742--4793
25
2.1
25
96
0
95
21
13
15
50
1.78
4747--4800
25
2.2
25
86
0
72
24
12
20
42
1.87
4880--4929
15
3.1
15
84
15
73
32
0
8
60
1.26
4889--4926
18
2.1
18
100
0
76
26
0
10
63
1.27
4928--4961
17
2.0
17
94
0
59
29
0
8
61
1.26
4963--5012
19
2.6
19
93
0
82
28
6
4
62
1.37
4996--5050
19
2.8
19
86
2
65
27
5
0
67
1.12
4958--5032
38
2.0
38
84
5
98
25
8
2
64
1.34
5063--5251
17
10.4
18
69
17
79
44
1
2
51
1.22
5132--5238
8
12.6
8
73
14
72
49
0
0
49
1.07
5093--5251
77
2.1
76
84
5
205
45
1
3
49
1.25
5128--5251
35
3.3
35
86
12
176
50
0
1
48
1.10
5263--5390
4
32.2
4
70
24
85
71
3
0
24
1.08
5276--5353
13
6.5
13
79
19
82
71
5
0
23
1.05
5269--5386
45
2.7
44
90
6
186
71
4
0
23
1.09
7475--7814
30
11.3
30
100
0
680
16
23
23
36
1.94
7828--8062
18
13.1
18
96
3
397
22
14
12
50
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8380--8417
18
2.1
18
100
0
76
28
21
15
34
1.94
10225--10393
78
2.2
78
97
0
320
35
8
15
40
1.77
10376--10408
15
2.2
15
100
0
66
48
0
6
45
1.27
10469--10501
15
2.2
15
100
0
66
48
0
6
45
1.27
10298--10574
93
3.0
93
100
0
554
36
7
14
41
1.74
12955--13022
21
3.4
20
82
13
86
61
0
0
38
0.96
12963--13020
6
10.0
6
85
10
77
65
0
0
34
0.93
12955--13020
27
2.5
26
87
9
89
63
0
0
36
0.95
14965--15010
23
2.0
23
100
0
92
26
21
4
47
1.69
20489--20532
21
2.1
21
100
0
88
22
9
13
54
1.67
20489--20540
21
2.5
21
90
6
70
26
7
11
53
1.63
20711--20788
20
4.0
20
83
6
115
65
0
5
29
1.14
20712--20784
38
1.9
38
100
0
146
69
0
5
24
1.09
21020--21083
24
2.6
25
90
5
103
57
0
0
42
0.98
21019--21057
18
2.2
18
100
0
78
56
0
0
43
0.99
21065--21092
14
2.0
14
100
0
56
57
0
0
42
0.99
21023--21097
18
4.1
18
74
19
73
60
0
0
40
0.97
23243--23272
15
2.0
15
100
0
60
20
13
13
53
1.72

Tables:   1

The End!