Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168335.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_558, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22977

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1003--1054
25
2.1
25
96
0
95
21
13
15
50
1.78
1008--1061
25
2.2
25
86
0
72
24
12
20
42
1.87
1141--1190
15
3.1
15
84
15
73
32
0
8
60
1.26
1150--1187
18
2.1
18
100
0
76
26
0
10
63
1.27
1189--1222
17
2.0
17
94
0
59
29
0
8
61
1.26
1224--1273
19
2.6
19
93
0
82
28
6
4
62
1.37
1257--1311
19
2.8
19
86
2
65
27
5
0
67
1.12
1219--1293
38
2.0
38
84
5
98
25
8
2
64
1.34
1324--1512
17
10.4
18
69
17
79
44
1
2
51
1.22
1393--1499
8
12.6
8
73
14
72
49
0
0
49
1.07
1354--1512
77
2.1
76
84
5
205
45
1
3
49
1.25
1389--1512
35
3.3
35
86
12
176
50
0
1
48
1.10
1524--1651
4
32.2
4
70
24
85
71
3
0
24
1.08
1537--1614
13
6.5
13
79
19
82
71
5
0
23
1.05
1530--1647
45
2.7
44
90
6
186
71
4
0
23
1.09
3736--4074
30
11.3
30
99
0
671
16
23
23
36
1.94
4088--4322
18
13.1
18
96
3
397
22
14
12
50
1.76
4640--4677
18
2.1
18
100
0
76
28
21
15
34
1.94
6485--6654
79
2.2
78
96
1
313
35
8
15
40
1.77
6637--6669
15
2.2
15
100
0
66
48
0
6
45
1.27
6558--6834
92
3.0
93
97
2
522
37
7
14
41
1.74
6729--6761
15
2.2
15
100
0
66
48
0
6
45
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9215--9282
21
3.4
20
82
13
86
61
0
0
38
0.96
9223--9280
6
10.0
6
85
10
77
65
0
0
34
0.93
9215--9280
27
2.5
26
87
9
89
63
0
0
36
0.95
11224--11269
23
2.0
23
100
0
92
26
21
4
47
1.69
16754--16797
21
2.1
21
100
0
88
22
9
13
54
1.67
16754--16805
21
2.5
21
90
6
70
26
7
11
53
1.63
16976--17053
20
4.0
20
83
6
115
65
0
5
29
1.14
16977--17049
38
1.9
38
100
0
146
69
0
5
24
1.09
17285--17348
24
2.6
25
90
5
103
57
0
0
42
0.98
17284--17322
18
2.2
18
100
0
78
56
0
0
43
0.99
17330--17357
14
2.0
14
100
0
56
57
0
0
42
0.99
17288--17362
18
4.1
18
74
19
73
60
0
0
40
0.97
19512--19541
15
2.0
15
100
0
60
20
13
13
53
1.72
20124--20154
14
2.2
14
100
0
62
29
12
6
51
1.65
21440--21480
18
2.3
18
95
0
73
53
4
4
36
1.44
21645--21696
10
5.1
10
78
17
54
53
7
1
36
1.41
21645--21697
13
3.9
14
79
18
58
54
7
1
35
1.40
21676--22418
180
4.1
181
98
0
1420
46
11
11
30
1.75

Tables:   1

The End!