Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168351.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22689

Tables:   1   

This is table  1  of  1  ( 88 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1042--1080
18
2.2
18
86
9
53
76
5
10
7
1.13
1176--1376
8
23.1
8
67
21
52
73
3
5
16
1.17
1250--1384
20
7.0
19
65
24
61
75
4
5
14
1.14
1243--1375
24
5.2
25
73
14
101
75
3
5
15
1.13
2052--2125
24
3.0
24
73
21
71
70
4
14
10
1.30
2297--2380
6
13.8
6
72
20
50
77
2
2
17
0.99
2265--2422
8
19.4
8
67
10
79
75
2
5
17
1.10
3426--3476
17
2.9
17
77
13
50
70
7
11
9
1.33
3621--3672
20
2.5
21
78
9
61
76
0
7
15
0.99
3627--3697
25
2.7
26
81
12
74
80
1
5
12
0.95
3627--3738
25
4.6
23
72
18
68
79
2
5
12
1.00
3649--3747
47
2.1
48
81
9
125
79
4
5
11
1.02
3649--3738
46
2.0
45
84
6
119
81
3
4
11
0.96
4236--4344
22
5.1
20
72
13
67
73
3
5
17
1.17
4448--4502
24
2.3
23
79
14
67
70
9
3
16
1.27
4899--5022
65
1.9
66
80
11
148
73
4
8
13
1.22
6255--6297
20
2.2
19
77
18
52
72
9
0
18
1.11
6257--6297
21
2.0
21
90
4
66
73
9
0
17
1.09
6635--6675
19
2.2
19
86
8
57
78
4
9
7
1.10
6838--6923
18
4.7
17
71
16
57
77
2
3
16
1.00
6858--6942
35
2.5
34
75
21
88
75
3
4
16
1.11
7850--7885
12
3.2
12
85
14
51
80
5
8
5
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7861--7929
14
5.2
14
73
22
51
81
4
4
10
0.97
7862--7954
27
3.6
26
80
13
95
78
3
4
13
1.03
7861--7952
26
3.5
25
74
12
78
79
3
4
13
1.01
7862--8025
33
4.9
32
70
24
90
77
2
6
13
1.07
7966--8035
16
4.5
15
81
12
72
81
1
10
7
0.93
7907--7996
12
7.4
12
70
9
58
76
1
4
17
1.01
7970--8025
16
3.6
15
86
13
78
80
1
10
7
0.97
7848--8038
19
10.8
18
68
17
82
77
2
6
13
1.07
7991--8072
37
2.2
38
84
6
105
79
1
10
8
1.00
8091--8155
22
2.9
22
80
17
71
76
3
13
6
1.09
8095--8154
31
2.0
30
83
3
75
78
3
13
5
1.04
8294--8322
12
2.4
12
100
0
58
86
0
0
13
0.58
8589--8653
33
1.9
34
84
6
87
76
0
12
10
1.01
9077--9116
18
2.2
19
86
4
55
77
5
10
7
1.11
9276--9356
26
3.2
24
78
16
74
76
1
4
17
1.03
9276--9356
25
3.1
27
80
16
75
76
1
4
17
1.03
9300--9370
15
4.6
14
71
22
54
78
1
5
14
0.99
9704--9785
39
2.1
39
82
11
96
76
4
4
13
1.11
9773--9815
15
3.0
14
76
6
50
79
4
4
11
1.04
9768--9805
19
1.9
19
89
5
58
81
7
2
7
0.96
9721--9805
35
2.4
35
76
7
84
76
7
3
12
1.12
9931--9974
16
2.7
16
86
10
54
75
0
11
13
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9874--9975
24
4.5
22
71
21
61
75
3
5
14
1.14
10742--10803
17
3.6
16
75
18
54
72
1
6
19
1.15
11419--11491
37
2.0
37
94
0
128
54
8
4
32
1.49
11431--11492
21
3.2
21
62
29
55
58
6
3
32
1.40
11667--11711
13
3.4
13
82
14
56
80
4
0
15
0.87
12224--12263
18
2.2
18
86
4
53
77
5
10
7
1.11
12373--12401
9
3.3
9
95
4
51
82
0
6
10
0.83
12377--12554
8
20.1
8
65
21
54
73
3
5
17
1.18
12427--12554
24
5.3
23
70
19
82
75
3
5
16
1.12
12427--12554
25
5.2
24
71
20
86
75
3
5
16
1.12
12434--12512
20
4.1
20
69
26
55
75
2
5
16
1.08
12427--12554
48
2.6
46
76
16
116
75
3
5
16
1.12
13419--13577
23
6.7
22
67
18
61
77
2
6
13
1.07
13409--13484
30
2.6
29
80
12
84
78
2
7
10
1.04
13419--13577
24
6.7
23
67
15
74
77
2
6
13
1.07
13830--13882
26
2.2
26
80
10
67
79
3
0
16
0.88
14134--14166
1
33.0
1
93
0
57
96
0
0
3
0.20
14770--14830
19
3.4
17
77
22
63
78
0
6
14
0.94
14763--14808
23
1.9
25
86
8
69
76
0
6
17
1.00
14763--14844
41
2.0
40
83
6
103
78
0
4
17
0.93
14787--14843
29
1.9
29
85
3
78
80
0
3
15
0.84
14787--14862
37
2.1
35
83
9
91
78
0
5
15
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15244--15281
17
2.1
19
85
9
53
81
7
2
7
0.96
15180--15288
39
2.7
39
75
13
98
75
5
4
14
1.15
15557--15602
25
1.9
23
86
8
65
65
15
2
17
1.37
16091--16136
17
2.8
17
75
15
51
76
4
4
15
1.11
16969--17030
22
2.7
22
82
5
70
59
6
8
25
1.50
17895--17942
24
2.0
23
84
4
60
72
2
6
18
1.15
17897--17974
34
2.3
33
77
16
88
73
2
7
16
1.18
18405--18477
25
2.9
26
74
17
73
76
5
4
13
1.11
18938--19064
7
16.6
7
71
18
69
77
2
5
14
1.06
18970--19047
13
5.9
13
75
8
68
79
2
1
16
0.91
19737--19944
112
1.9
107
80
12
235
65
4
11
18
1.41
20110--20153
22
2.0
23
82
13
56
79
4
9
6
1.04
20293--20376
10
8.6
9
72
13
60
77
2
4
15
1.04
20273--20376
25
4.2
23
70
23
59
75
1
4
17
1.06
20293--20379
30
2.8
31
73
15
81
78
2
4
14
1.02
20765--20950
8
23.6
8
65
14
50
74
4
5
16
1.17
20759--20796
17
2.1
19
85
9
53
81
7
2
7
0.96
20901--20942
14
2.7
16
85
10
52
76
0
11
11
1.03
21010--21109
23
4.2
23
73
16
69
74
9
6
11
1.23
22071--22121
18
2.8
18
84
0
57
84
1
1
11
0.79
22071--22101
1
31.0
1
93
0
53
96
3
0
0
0.21
22437--22498
22
2.7
23
82
9
74
61
6
8
24
1.48

Tables:   1

The End!