Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168353.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22650

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
418--851
181
2.4
179
77
7
457
39
6
10
43
1.66
1101--1162
17
3.6
17
74
23
58
37
3
1
58
1.24
1108--1179
34
2.2
34
82
7
87
36
2
2
58
1.27
1371--1416
14
3.2
14
78
6
56
45
2
2
50
1.26
1727--1772
22
2.1
21
84
4
56
47
2
2
47
1.26
2395--2440
19
2.2
22
85
11
62
52
4
4
39
1.41
2498--2539
22
1.9
22
85
0
57
54
0
2
42
1.13
2651--2729
31
2.5
31
81
6
79
53
2
2
41
1.28
3019--4007
180
5.4
180
75
11
739
39
8
9
42
1.68
3686--3715
15
2.0
15
100
0
60
46
6
6
40
1.56
5218--5724
181
2.8
178
80
8
580
41
7
9
41
1.67
5929--5994
28
2.4
29
82
12
77
56
0
1
42
1.08
6056--6089
16
2.1
17
88
5
52
41
2
2
52
1.31
6107--6152
16
2.8
17
77
6
51
47
0
2
50
1.13
6130--6171
22
1.9
22
90
0
66
45
2
0
52
1.13
6333--6947
181
3.4
180
82
6
674
41
9
8
40
1.67
7426--7475
23
2.1
25
85
7
68
52
0
2
46
1.12
7577--7615
17
2.4
17
91
4
62
56
0
0
43
0.99
8392--8437
13
3.6
13
80
11
51
50
0
0
50
1.00
9260--9314
23
2.5
22
83
13
69
49
0
1
49
1.11
9358--9420
27
2.3
26
83
5
72
49
3
3
44
1.34
9395--9429
16
2.3
15
90
5
52
54
2
5
37
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9561--9605
23
1.9
24
81
4
56
48
4
0
46
1.22
9720--9805
13
6.4
14
71
19
67
47
1
2
48
1.22
9767--9791
12
2.1
12
100
0
50
48
0
0
52
1.00
10778--10818
17
2.3
18
88
12
59
46
2
0
51
1.14
11451--11485
16
2.1
17
89
10
54
45
0
0
54
0.99
11455--11505
24
2.1
23
85
7
66
49
0
0
50
1.00
12097--12168
10
6.6
11
70
20
62
52
0
0
47
1.00
12106--12173
22
3.3
20
75
13
66
52
0
0
47
1.00
12513--12559
17
2.8
17
79
17
53
46
2
0
51
1.13
12513--12560
21
2.5
19
80
16
55
45
2
0
52
1.12
13686--13745
29
2.0
31
83
6
79
40
1
5
53
1.33
13825--13858
17
2.0
17
88
11
52
44
2
0
52
1.16
13989--14049
12
4.8
12
78
13
52
44
1
0
54
1.10
14003--14049
13
3.5
13
77
11
51
46
0
0
53
1.00
14227--14271
17
2.6
17
82
10
56
55
2
0
42
1.12
14294--14318
13
1.9
13
100
0
50
48
0
0
52
1.00
14472--14518
16
2.9
16
72
12
51
61
6
0
31
1.21
14563--14897
181
1.8
182
80
6
403
42
10
6
41
1.64
15327--15391
24
3.0
21
70
16
60
49
0
1
49
1.10
16019--16063
17
2.7
18
83
10
60
44
4
0
51
1.21
16055--16109
21
2.6
21
88
2
74
45
1
5
47
1.36
16092--16172
33
2.4
30
75
20
72
50
1
0
48
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16278--16311
16
2.1
16
89
10
52
55
0
0
44
0.99
16277--16352
27
3.1
25
79
20
81
50
0
2
47
1.15
16307--16362
16
3.9
15
71
17
55
46
0
3
50
1.19
17043--17117
26
3.1
24
74
16
66
46
4
1
48
1.29
17644--17668
8
3.1
8
100
0
50
36
0
0
64
0.94
17787--17823
16
2.4
16
90
4
58
45
0
0
54
1.00
18232--18256
13
1.9
13
100
0
50
60
8
0
32
1.26
20430--20472
6
7.0
6
81
5
50
48
2
0
48
1.14
21830--21870
21
1.9
22
85
5
57
53
2
0
43
1.13
21916--21973
23
2.4
23
83
11
64
48
0
3
48
1.18
21987--22054
14
4.6
16
73
23
51
45
2
4
47
1.38
22369--22437
27
2.5
27
80
13
70
49
2
0
47
1.16
22510--22606
12
7.4
14
70
16
55
44
3
2
50
1.29

Tables:   1

The End!