Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168374.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21989

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
579--606
14
2.0
14
100
0
56
42
0
0
57
0.99
614--652
18
2.2
18
100
0
78
43
0
0
56
0.99
588--651
24
2.6
25
90
5
103
42
0
0
57
0.98
907--962
12
4.7
12
76
6
51
19
5
0
75
1.00
883--959
20
4.1
19
84
5
111
28
5
0
66
1.13
887--958
37
1.9
38
97
2
137
23
5
0
70
1.08
886--976
37
2.4
37
83
8
96
25
4
2
68
1.20
1137--1180
21
2.1
21
100
0
88
54
13
9
22
1.67
6666--6711
23
2.0
23
100
0
92
47
4
21
26
1.69
8656--8713
6
10.0
6
82
14
77
34
0
0
65
0.93
8656--8722
21
3.2
21
83
8
84
37
0
0
62
0.95
8656--8713
27
2.2
27
90
6
93
34
0
0
65
0.93
8654--8721
31
2.3
29
81
18
86
38
0
0
61
0.96
11175--11207
15
2.2
15
100
0
66
45
6
0
48
1.27
11190--11451
78
3.2
78
76
16
301
41
14
8
35
1.76
11268--11300
15
2.2
15
100
0
66
45
6
0
48
1.27
11102--11378
93
3.0
93
100
0
554
41
14
7
36
1.74
13259--13296
18
2.1
18
100
0
76
34
15
21
28
1.94
13614--13847
18
13.1
18
96
3
397
50
12
14
22
1.76
13862--14201
30
11.3
30
100
0
680
36
23
23
16
1.94
16291--16414
45
2.9
44
89
8
186
24
0
4
70
1.09
16324--16401
13
6.5
13
79
19
82
23
0
5
71
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16287--16414
4
32.2
4
70
22
85
24
0
3
71
1.08
16426--16549
35
3.3
35
84
14
176
48
1
0
50
1.10
16439--16546
42
2.6
42
91
5
166
50
0
0
49
1.07
16439--16596
77
2.1
77
82
7
187
51
2
1
44
1.23
16426--16614
17
10.4
18
68
17
79
51
2
1
44
1.22
16626--16707
19
4.3
19
83
6
69
67
2
4
25
1.23
16635--16721
19
4.5
19
84
2
95
64
2
6
26
1.31
16716--16749
17
2.0
17
94
0
59
61
8
0
29
1.26
16748--16797
15
3.1
15
84
15
73
60
8
0
32
1.26
16751--16788
18
2.1
18
100
0
76
63
10
0
26
1.27
16883--16934
25
2.1
25
96
0
95
50
15
13
21
1.78
16973--17021
17
2.9
16
80
17
55
77
2
6
14
1.05
17969--18019
22
2.4
22
93
3
86
37
7
3
50
1.50
21433--21495
21
3.2
21
89
10
98
34
0
0
65
0.93
21426--21495
13
5.5
13
80
19
85
35
0
0
64
0.94
21674--21751
10
7.6
10
80
13
63
32
7
0
60
1.25
21676--21743
27
2.5
26
86
6
100
30
8
0
60
1.27
21702--21744
11
4.0
11
93
6
79
27
9
0
62
1.25
21742--21799
20
2.8
21
81
7
64
27
13
1
56
1.47
21672--21793
21
6.0
21
79
14
73
28
12
0
58
1.40
21674--21758
21
3.5
24
78
18
95
30
9
0
60
1.29
21785--21818
17
2.0
17
100
0
68
35
11
0
52
1.38

Tables:   1

The End!