Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168385.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21714

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1992--2033
12
3.5
12
81
18
52
73
7
9
9
1.24
2048--2077
12
2.5
12
94
0
51
76
0
3
20
0.92
2068--2114
17
2.9
16
82
14
53
70
0
6
23
1.10
2439--2479
22
1.9
21
85
5
55
75
2
2
19
1.03
2475--2517
19
2.3
18
80
11
50
60
0
18
20
1.36
2801--2855
26
2.2
26
83
9
69
76
9
7
7
1.16
4236--4297
26
2.3
27
75
2
63
69
1
12
16
1.27
5007--5060
24
2.2
25
87
6
76
74
5
11
9
1.22
5007--5047
12
3.3
13
80
10
50
75
7
9
7
1.18
5087--5156
17
3.9
18
72
10
56
71
1
5
21
1.15
5086--5148
30
2.2
29
83
13
78
71
0
4
23
1.05
5087--5146
18
3.5
16
76
14
57
71
0
5
23
1.05
5476--5516
22
1.9
21
85
5
55
75
2
2
19
1.03
5594--5645
18
2.9
17
78
13
52
75
9
11
3
1.18
5853--5890
16
2.4
16
83
12
51
76
0
10
13
1.02
6294--6333
18
2.3
18
87
12
57
77
2
5
15
1.04
7283--7344
26
2.3
27
75
2
63
69
1
12
16
1.27
8052--8092
12
3.3
13
80
10
50
75
7
9
7
1.18
8052--8102
23
2.2
24
82
10
61
76
5
9
7
1.15
8170--8223
27
2.1
26
82
6
65
77
5
7
9
1.11
8513--8553
22
1.9
21
85
5
55
75
2
2
19
1.03
8503--8627
64
1.9
66
80
6
148
72
2
12
12
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11096--11137
12
3.5
12
81
18
52
73
7
9
9
1.24
11129--11180
11
4.8
11
80
4
54
76
0
1
21
0.87
13735--13792
16
3.4
17
72
23
50
75
3
5
15
1.11
14150--14203
24
2.2
25
87
6
76
74
5
11
9
1.22
14150--14190
12
3.3
13
80
10
50
75
7
9
7
1.18
14195--14241
17
2.7
18
74
6
53
59
2
4
34
1.29
14232--14295
29
2.2
29
81
10
69
70
0
6
23
1.10
14234--14293
17
3.5
17
76
14
61
70
0
6
23
1.11
14622--14662
22
1.9
21
85
5
55
75
2
2
19
1.03
14669--14744
23
3.4
22
72
18
66
76
1
13
9
1.08
14611--14743
70
1.9
70
84
1
178
74
2
11
12
1.16
15033--15073
16
2.5
17
77
18
50
73
4
9
12
1.24
16479--16540
26
2.3
27
75
2
63
69
1
12
16
1.27
17217--17264
12
3.9
12
81
5
60
79
4
10
6
1.05
17303--17365
30
2.2
29
83
13
78
71
0
4
23
1.05
17304--17363
18
3.5
16
76
14
57
71
0
5
23
1.05
17693--17733
22
1.9
21
85
5
55
75
2
2
19
1.03
17751--17805
19
2.7
21
81
18
71
72
1
18
7
1.16
18112--18152
16
2.5
17
77
18
50
73
4
9
12
1.24
19548--19609
26
2.3
27
75
2
63
69
1
12
16
1.27
19897--19950
22
2.7
19
77
11
54
77
1
5
14
1.03
20305--20347
12
3.5
13
81
9
54
74
6
9
9
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20340--20369
16
1.9
15
93
6
51
80
0
6
13
0.91
20764--20890
63
2.0
64
81
6
148
72
3
11
12
1.23
21107--21159
24
2.2
24
81
12
65
83
3
7
5
0.92
21104--21167
18
3.4
18
72
16
58
79
3
6
10
1.02

Tables:   1

The End!