Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168392.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21625

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
550--880
56
5.8
57
89
9
496
34
11
7
46
1.68
550--880
117
2.9
115
90
7
514
34
11
7
46
1.68
1317--1354
20
1.9
20
94
0
67
23
18
26
31
1.97
1318--1362
20
2.3
20
88
3
65
26
22
24
26
2.00
1417--1484
31
2.2
31
86
0
91
27
25
22
25
1.99
1859--1918
13
4.8
13
75
8
54
71
1
5
21
1.14
1899--2066
90
1.9
90
80
8
198
67
5
0
26
1.18
1990--2060
10
6.8
11
78
13
55
69
2
1
26
1.11
2021--2052
3
10.3
3
93
6
55
68
0
0
31
0.90
2239--2328
1
90.0
1
79
0
99
0
0
10
90
0.47
2239--2328
8
11.5
8
82
15
109
0
0
10
90
0.47
2239--2325
16
5.4
16
84
6
122
0
0
10
89
0.48
2334--2887
116
4.6
119
93
6
955
37
22
18
22
1.94
2334--2887
41
14.0
39
95
4
922
37
22
18
22
1.94
4052--4107
8
6.4
9
82
12
64
7
14
0
78
0.95
4052--4110
17
3.6
16
83
4
73
8
15
0
76
1.01
7920--8268
60
5.7
60
85
11
444
32
13
8
46
1.72
8721--8758
20
1.9
20
94
0
67
23
18
26
31
1.97
8722--8767
20
2.3
20
85
7
58
26
23
23
26
2.00
9239--9310
28
2.7
26
80
18
69
70
4
2
22
1.17
9244--9336
30
3.2
28
70
15
64
70
6
3
19
1.22
9352--9457
28
3.7
28
76
18
94
64
4
0
31
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13076--13102
10
2.7
10
100
0
54
37
0
7
55
1.28
14359--14432
38
1.9
38
97
0
139
22
18
25
32
1.97
16641--16728
43
2.0
43
93
0
149
35
13
12
38
1.83
17622--17654
9
3.3
10
87
12
50
78
0
9
12
0.95
18365--18394
2
15.5
2
93
6
53
50
0
0
50
1.00
19754--19792
14
2.8
13
81
11
51
46
0
0
53
1.00
19926--19957
2
16.0
2
93
0
55
50
0
3
46
1.17

Tables:   1

The End!