Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168394.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21604

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3536--3796
57
4.6
57
89
3
384
38
12
5
43
1.66
3536--3803
113
2.4
114
90
3
398
38
11
5
44
1.65
3822--3919
6
16.5
6
70
16
62
78
2
5
14
1.01
3822--3919
17
5.9
16
75
10
74
78
2
5
14
1.01
3822--3933
5
21.6
5
68
20
61
76
1
5
16
1.05
4793--4860
13
4.7
14
71
16
50
76
1
2
19
0.99
4796--4829
9
3.6
9
88
11
50
82
2
0
14
0.79
4804--4864
31
1.9
32
86
3
88
73
1
3
21
1.06
4915--5047
3
43.7
3
71
14
51
68
1
4
25
1.17
4960--5048
15
5.7
15
70
19
58
74
2
2
21
1.04
4973--5077
43
2.4
43
84
9
126
75
2
2
19
1.06
4993--5077
25
3.5
25
75
15
79
77
2
2
17
0.98
4968--5075
6
17.3
6
75
16
71
75
2
2
18
1.04
5242--5410
42
4.1
41
90
3
232
36
21
16
24
1.94
6420--6455
17
2.1
17
89
0
54
5
16
0
77
0.94
16230--16272
22
2.0
22
86
4
61
72
4
0
23
1.04
16849--16933
32
2.6
33
83
3
100
43
11
10
34
1.76
21527--21573
18
2.5
19
82
6
60
25
2
2
70
1.10

Tables:   1

The End!