Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168422.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_636, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20948

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2489--2765
58
4.7
56
79
11
281
39
14
5
40
1.69
2792--2859
5
12.6
5
82
11
73
77
1
2
17
0.96
2791--2864
11
6.6
11
79
13
80
77
1
4
17
1.00
2890--2924
3
11.7
3
100
0
70
68
0
0
31
0.90
3393--3437
20
2.1
21
84
8
56
57
17
0
24
1.40
3677--3833
48
3.4
46
80
14
153
60
1
4
33
1.25
3722--3830
24
4.6
25
79
14
117
58
0
4
35
1.25
3671--3844
11
15.9
10
71
18
84
61
1
4
32
1.26
7355--7443
15
5.8
15
69
13
65
52
3
2
41
1.30
8825--8871
13
3.5
13
77
11
58
27
2
0
70
0.99
8808--8863
22
2.5
22
82
5
60
30
3
0
66
1.09
8818--8877
28
2.1
28
93
0
102
35
1
0
63
1.05
10713--10822
56
1.9
56
85
5
150
25
8
5
60
1.46
10734--10822
28
3.2
27
67
17
65
26
10
6
56
1.57
12392--12735
44
8.0
43
74
12
251
43
18
13
25
1.86
12398--12735
129
2.6
127
80
5
356
44
17
13
25
1.85
12392--12734
86
4.0
85
78
9
313
43
18
13
25
1.86
15415--15459
23
2.0
22
83
12
56
46
4
4
44
1.43
15918--16214
145
2.0
149
93
5
516
41
9
8
39
1.69
17224--17260
3
12.0
3
94
5
65
64
0
0
35
0.94
17499--17538
5
8.0
5
91
0
62
57
2
0
40
1.12
18282--18362
26
3.4
24
85
9
103
33
2
0
64
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19729--19881
52
2.9
52
86
3
184
26
24
7
41
1.82
19909--19948
11
3.6
11
82
0
53
52
30
0
17
1.45
19909--19951
22
2.0
22
95
0
77
48
30
0
20
1.50
20169--20233
25
2.7
25
80
4
71
26
40
4
29
1.76
20192--20241
25
2.0
25
92
0
82
24
36
4
36
1.74
20238--20315
25
3.2
24
72
5
75
17
32
11
38
1.86
20846--20945
51
2.0
51
88
7
150
27
23
7
43
1.79

Tables:   1

The End!