Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168431.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_644, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20823

Tables:   1   

This is table  1  of  1  ( 77 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
489--531
20
2.0
20
82
8
50
46
0
2
51
1.13
503--541
20
2.0
20
90
10
62
48
0
0
51
1.00
497--573
14
5.2
14
70
25
52
50
0
0
49
1.00
514--578
30
2.1
31
91
8
105
52
0
0
47
1.00
509--577
18
4.2
16
71
28
56
50
0
0
49
1.00
518--587
32
2.2
32
85
10
90
54
1
0
44
1.09
856--894
17
2.3
16
86
8
51
46
2
2
48
1.29
963--996
16
2.1
16
94
0
59
58
0
0
41
0.98
2161--2307
73
2.0
73
87
7
210
45
7
9
37
1.65
2387--2443
28
2.0
28
83
6
71
42
0
1
56
1.10
2412--2451
19
2.2
18
86
13
55
45
0
0
55
0.99
2823--2874
27
1.9
27
84
7
70
46
0
0
53
1.00
2821--2867
23
2.0
23
83
0
58
48
0
0
51
1.00
3017--3107
23
4.0
23
77
15
91
46
0
2
51
1.13
3033--3083
16
3.1
16
75
24
52
41
0
1
56
1.10
2983--3084
19
5.5
19
71
25
76
45
0
1
51
1.19
4577--4616
19
2.1
19
90
9
64
45
0
0
55
0.99
4705--4745
19
2.2
19
86
0
55
48
4
0
46
1.23
4987--5029
17
2.5
18
88
11
72
53
4
0
41
1.21
5586--5624
16
2.4
16
84
12
53
48
0
0
51
1.00
7299--7345
13
3.5
13
82
8
51
48
0
0
51
1.00
7287--7337
20
2.5
20
78
12
68
45
0
0
54
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7910--7941
11
3.0
11
95
4
57
53
0
0
46
1.00
7907--7949
10
4.2
10
85
5
59
60
0
0
39
0.97
8126--8161
18
2.0
19
89
10
58
47
0
5
47
1.25
8265--8302
13
2.7
15
88
12
53
47
0
0
52
1.00
8265--8368
28
3.7
28
70
21
74
47
0
0
50
1.14
9302--9378
9
8.0
9
79
14
66
49
0
1
49
1.09
9334--9404
32
2.3
29
80
9
79
46
0
1
52
1.09
9305--9404
5
20.6
5
74
19
52
49
0
1
50
1.07
9315--9404
9
9.9
9
77
15
71
48
0
1
50
1.08
9565--9622
17
3.4
17
81
13
57
44
3
0
51
1.18
9772--9804
17
1.9
17
88
11
50
60
0
0
39
0.97
10750--10816
27
2.6
25
78
19
66
55
1
0
43
1.09
10776--10840
23
2.7
23
71
21
62
47
0
0
52
1.00
10781--10843
12
5.2
13
72
14
53
42
0
0
57
0.99
10778--10848
11
6.0
12
74
19
69
45
0
0
54
0.99
10807--10869
22
3.0
22
79
9
60
47
0
1
50
1.10
10842--10886
19
2.4
19
85
10
58
55
0
2
42
1.12
10994--11053
30
2.0
30
83
6
77
48
0
3
48
1.18
12389--12426
19
2.1
18
85
14
51
39
2
2
55
1.28
13026--13060
14
2.4
15
85
4
54
51
2
0
45
1.16
13141--13190
17
2.8
19
73
14
52
42
10
6
42
1.63
13564--13597
13
2.5
13
90
4
50
47
2
0
50
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13783--13809
11
2.5
11
100
0
54
55
0
0
44
0.99
13934--14006
30
2.4
30
82
13
78
49
1
0
49
1.09
14322--14465
47
3.1
47
66
24
108
50
2
0
47
1.18
14397--14427
16
1.9
16
93
0
53
54
3
0
41
1.16
14988--15031
18
2.4
18
76
0
52
50
0
2
47
1.13
15127--15165
20
2.0
20
85
14
55
35
5
2
56
1.35
15668--16163
181
2.8
180
78
4
464
41
8
9
40
1.68
16665--16738
12
6.3
12
72
7
55
55
0
1
43
1.08
16677--16710
15
2.1
15
89
10
50
55
0
0
44
0.99
16733--16775
17
2.5
17
80
3
50
44
2
0
53
1.13
17155--17185
16
1.9
16
93
0
53
51
0
0
48
1.00
17164--17194
12
2.5
13
89
10
55
54
0
0
45
0.99
17149--17216
25
2.8
24
72
16
59
47
0
0
52
1.00
17439--17476
11
3.6
11
82
13
53
42
2
0
55
1.14
17423--17478
28
2.0
29
85
3
78
41
1
1
55
1.21
17740--17773
16
2.1
17
88
5
52
44
2
0
52
1.16
18077--18118
21
1.9
23
85
9
61
40
0
4
54
1.21
18283--18419
23
5.8
23
66
27
65
45
0
1
51
1.15
18294--18338
19
2.4
19
85
10
58
42
2
0
55
1.12
18283--18382
23
4.5
22
73
14
66
48
1
0
51
1.07
18305--18405
11
9.5
11
72
17
56
49
0
0
48
1.14
18332--18409
11
7.0
12
74
12
60
52
0
1
46
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18386--18424
20
2.0
20
84
0
51
46
0
2
51
1.14
18793--18838
17
2.6
19
80
16
62
56
2
0
41
1.11
18848--18914
26
2.6
25
83
9
73
49
0
1
49
1.10
19155--19192
16
2.2
17
86
13
51
47
2
0
50
1.15
19155--19204
14
3.1
16
83
13
50
50
2
2
46
1.24
19302--19342
20
2.0
22
90
9
68
46
0
2
51
1.14
20237--20283
23
2.0
24
91
4
78
44
4
2
48
1.34
20431--20533
13
8.3
13
71
21
62
49
0
0
50
1.00
20421--20466
17
2.7
17
86
10
67
52
0
0
47
1.00
20456--20562
34
3.1
35
75
15
114
52
0
0
46
1.06
20438--20544
17
6.2
17
69
25
57
51
0
0
48
1.00

Tables:   1

The End!