Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168433.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_646, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20781

Tables:   1   

This is table  1  of  1  ( 68 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
562--609
17
2.8
17
75
12
53
41
2
2
54
1.24
1106--2695
181
8.8
180
74
10
919
40
8
10
40
1.70
1320--2695
543
2.5
537
78
7
1341
39
8
10
41
1.70
3296--3352
28
2.1
27
93
3
96
43
7
3
45
1.48
3911--4031
7
16.7
7
68
16
61
49
2
1
46
1.25
3868--3952
33
2.5
33
78
12
84
45
2
2
49
1.27
4196--5849
180
9.2
180
75
9
1141
41
9
8
40
1.68
4196--5861
362
4.6
356
76
8
1176
41
9
8
40
1.68
6355--6401
22
2.1
22
84
7
60
46
2
4
46
1.34
6399--6488
8
10.1
9
72
20
57
52
3
0
44
1.17
6442--6485
15
2.7
16
80
16
54
45
4
0
50
1.22
6697--6733
14
2.7
15
84
16
53
45
0
0
54
1.00
6697--6738
17
2.7
15
85
10
50
50
0
0
50
1.00
6709--6747
17
2.3
17
86
0
51
51
0
2
46
1.14
7092--7130
19
2.1
18
85
4
51
53
0
2
43
1.14
7462--7509
16
2.9
16
81
12
62
45
0
2
52
1.12
7442--7519
25
3.0
25
80
12
88
51
0
1
47
1.09
7500--7544
15
2.9
15
83
12
56
57
0
0
42
0.98
7528--7613
44
1.9
45
80
2
102
54
5
3
36
1.41
8450--8474
13
1.9
13
100
0
50
32
0
8
60
1.26
8534--8850
163
2.0
161
83
5
406
42
8
11
38
1.70
8690--9126
180
2.4
179
84
6
558
42
7
10
38
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9624--10480
361
2.4
357
79
7
892
40
7
10
41
1.66
9624--10506
181
4.9
177
78
6
782
40
7
9
41
1.67
10727--10851
13
9.8
13
67
18
57
48
2
4
44
1.34
10810--10857
14
3.6
13
76
23
55
52
0
0
47
1.00
10817--10855
19
2.1
19
85
9
53
56
0
0
43
0.99
10813--10864
26
2.0
27
88
7
81
53
0
0
46
1.00
10963--11006
18
2.6
17
82
13
56
52
0
2
45
1.13
10960--11016
22
2.6
23
83
8
73
49
0
1
49
1.11
11433--11492
27
2.2
28
88
8
88
46
0
0
53
1.00
12708--12759
27
1.9
27
84
7
70
51
0
0
48
1.00
12734--12778
23
1.9
24
81
4
56
48
4
0
46
1.22
12824--13744
178
5.1
180
76
9
792
42
9
8
39
1.67
14162--14223
22
2.7
23
78
9
65
45
1
3
50
1.27
14437--14525
10
9.2
10
69
15
62
48
2
0
49
1.13
14437--14508
35
2.2
32
82
7
90
45
1
0
52
1.09
14437--14504
8
8.4
8
71
20
52
45
1
0
52
1.09
14791--14827
18
2.1
18
90
10
58
32
2
10
54
1.49
14842--14888
13
3.5
13
76
21
51
34
2
6
57
1.36
15149--15217
29
2.4
29
77
15
72
44
2
1
50
1.25
15503--15566
24
2.7
24
78
4
67
51
1
3
43
1.26
15766--15824
16
3.7
16
77
11
50
40
1
0
57
1.09
15795--15827
16
2.1
16
94
0
57
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15809--15856
21
2.2
21
85
10
62
56
0
4
39
1.19
16218--16248
14
2.2
14
94
0
53
61
0
0
38
0.96
16542--16579
20
1.9
20
84
10
51
36
0
5
57
1.21
16749--16813
13
4.9
13
76
12
53
47
0
0
52
1.00
16725--16783
22
2.7
21
84
10
73
50
0
3
45
1.18
16752--16806
12
4.5
12
74
19
51
45
0
0
54
0.99
17543--17595
23
2.3
23
83
9
63
49
3
3
43
1.38
17594--17630
20
2.0
19
85
15
51
43
5
0
51
1.24
18028--18067
13
3.1
14
82
13
50
42
0
0
57
0.98
18173--18229
18
3.3
18
74
13
50
54
0
3
42
1.17
18196--18238
18
2.3
19
84
8
61
51
0
2
46
1.13
18310--18385
25
3.0
24
72
14
64
48
1
1
48
1.18
18858--18934
26
2.9
27
80
16
72
48
5
1
45
1.33
19124--19170
23
2.0
23
87
0
67
53
0
0
46
1.00
19342--19402
24
2.6
24
84
7
63
54
0
0
45
1.00
19362--19403
4
10.5
4
85
10
50
54
0
0
45
0.99
19370--19409
18
2.2
18
90
4
62
55
0
0
45
0.99
19355--19402
23
2.0
24
92
8
80
56
0
0
43
0.99
19414--19484
26
2.9
25
78
12
69
42
1
4
52
1.29
19517--19551
18
1.9
18
88
0
52
48
2
0
48
1.16
19547--19643
28
3.5
27
68
19
65
45
1
2
51
1.19
19629--19676
21
2.2
22
85
14
64
41
0
2
56
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19906--20003
40
2.5
39
77
15
96
45
3
2
48
1.29
20136--20216
16
5.1
16
68
13
51
51
1
0
46
1.08

Tables:   1

The End!