Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167887.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_154, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64280

Tables:   1   

This is table  1  of  1  ( 56 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2068--2120
21
2.5
22
82
14
58
52
3
0
43
1.19
2078--2120
21
2.0
23
86
9
63
51
4
0
44
1.22
2544--2572
14
2.0
15
93
6
51
34
6
3
55
1.44
3885--3915
2
15.5
2
100
0
62
51
0
0
48
1.00
4127--4164
2
20.5
2
84
15
55
50
0
0
50
1.00
4128--4170
10
4.4
9
82
11
50
46
0
2
51
1.13
4275--4308
14
2.4
14
90
9
52
58
0
0
41
0.98
4418--4487
29
2.3
30
81
11
81
42
8
1
47
1.43
6093--6148
26
2.2
26
84
12
71
50
12
1
35
1.51
6533--6566
17
2.0
17
88
0
50
47
2
0
50
1.16
7494--7535
11
3.7
11
87
3
57
57
2
0
40
1.12
7778--7810
17
1.9
17
93
0
57
60
0
0
39
0.97
11033--11073
19
2.1
20
90
4
66
60
0
7
31
1.24
17365--17407
19
2.3
19
92
8
70
32
0
0
67
0.91
17372--17409
10
3.9
10
82
6
51
34
0
0
65
0.93
18135--18171
19
1.9
19
94
0
65
27
2
5
64
1.28
18515--18581
26
2.8
23
76
12
71
53
8
2
34
1.47
22303--22338
8
4.6
8
86
6
56
22
2
0
75
0.94
22297--22339
15
2.6
17
85
14
72
23
4
0
72
1.04
22334--22394
29
2.1
29
81
0
68
40
3
11
44
1.57
22778--22839
32
1.9
32
87
6
90
53
16
6
24
1.66
22862--22901
21
1.9
21
89
0
62
55
5
5
35
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23303--23359
3
19.0
3
100
0
114
66
0
0
33
0.92
23758--24032
114
2.4
115
84
5
349
42
14
22
20
1.89
23722--24379
116
5.6
116
72
9
362
44
15
20
19
1.86
23947--24364
122
3.5
120
73
10
332
45
16
19
18
1.86
23959--24384
123
3.5
121
73
6
359
45
15
19
19
1.85
24703--24733
1
31.0
1
93
0
53
0
0
3
96
0.21
31263--31339
31
2.5
32
78
19
83
58
5
7
28
1.48
31523--31565
17
2.5
17
88
0
68
48
4
2
44
1.36
32135--32932
399
2.0
398
98
0
1533
38
14
17
29
1.90
36850--36894
14
3.5
13
79
11
56
71
2
0
26
0.98
36850--36894
19
2.3
20
88
3
65
71
2
0
26
0.98
36850--36880
7
4.6
7
96
4
55
70
0
0
29
0.87
36851--36920
20
3.4
20
77
16
63
68
1
2
27
1.12
36882--36919
20
1.9
19
94
5
67
68
0
5
26
1.11
38512--38542
11
2.7
11
95
5
53
64
0
3
32
1.09
50116--50495
47
8.2
47
81
11
446
29
12
20
37
1.90
50234--50312
38
2.1
37
86
4
106
31
8
22
36
1.85
50187--50456
84
3.0
86
79
14
253
30
12
21
36
1.90
50466--50523
28
2.1
28
96
0
107
41
6
17
34
1.76
50417--50660
75
3.0
76
80
15
283
31
13
20
34
1.91
50494--50971
49
10.2
49
80
11
538
30
14
20
34
1.92
50270--50859
262
2.2
268
89
6
886
29
13
20
35
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50494--50958
138
3.3
139
83
6
514
30
14
20
35
1.92
50493--50957
185
2.5
186
88
4
686
30
13
20
35
1.92
50494--50977
234
2.1
232
85
8
633
30
14
20
35
1.92
51096--51177
20
4.2
18
73
16
56
64
3
7
24
1.35
51134--51173
21
1.9
21
90
10
64
67
2
5
25
1.23
51142--51184
21
2.0
21
82
8
52
72
0
4
23
1.04
52501--52553
21
2.4
21
84
9
61
67
3
0
28
1.07
52540--52583
19
2.3
19
77
11
54
61
0
6
31
1.22
55783--55815
17
1.9
17
93
0
57
60
0
0
39
0.97
56974--57051
38
2.1
37
80
7
86
38
12
1
47
1.50
58472--58502
16
2.0
15
93
6
53
70
0
0
29
0.87
59045--59085
19
2.1
20
90
4
66
60
0
7
31
1.24

Tables:   1

The End!