Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168449.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_660, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20401

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1053--1093
22
1.9
21
85
5
55
73
2
4
19
1.13
2213--2266
22
2.4
22
79
14
56
75
5
7
11
1.16
2806--2865
13
4.6
13
76
21
63
76
1
13
8
1.08
3927--3969
18
2.5
17
81
7
52
72
0
9
18
1.11
4399--4513
59
2.0
56
83
9
144
67
4
10
17
1.36
4434--4483
23
2.3
21
86
6
64
76
2
8
14
1.10
5439--5479
22
1.9
21
85
5
55
73
2
4
19
1.13
5488--5531
23
1.9
24
81
9
56
72
2
15
9
1.19
5435--5546
56
2.0
56
84
5
145
73
1
11
13
1.18
6946--7003
24
2.6
22
75
17
57
72
1
15
10
1.19
7530--7586
30
2.0
28
83
10
71
68
3
14
14
1.34
7692--7749
18
3.3
16
77
15
53
81
3
5
10
0.97
7979--8019
22
1.9
21
85
5
55
75
2
2
19
1.03
9042--9083
20
2.2
19
87
12
59
76
0
16
7
1.00
9042--9083
19
2.2
20
86
4
59
76
0
16
7
1.00
9824--9864
22
1.9
21
85
5
55
73
2
4
19
1.13
9824--9930
55
1.9
55
83
5
135
72
1
11
14
1.19
10145--10194
23
2.1
24
85
10
68
76
6
10
8
1.17
10974--11027
22
2.4
22
79
14
56
75
5
7
11
1.16
11574--11622
24
2.1
23
85
11
64
79
0
8
12
0.93
11901--11958
30
2.0
28
83
9
73
67
3
13
15
1.36
12072--12111
20
2.0
20
85
9
55
72
0
7
20
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12651--12710
13
4.6
12
75
22
50
76
1
10
11
1.09
12651--12711
17
3.5
17
74
26
56
75
1
11
11
1.12
13132--13259
61
2.1
59
84
9
161
67
3
10
17
1.35
13168--13218
23
2.3
22
86
3
66
76
1
7
13
1.09
13396--13437
20
2.2
19
87
12
59
76
0
16
7
1.00
13396--13437
19
2.2
20
86
4
59
76
0
16
7
1.00
13441--13495
26
2.2
25
77
6
58
74
3
5
16
1.15
12771--14129
721
1.9
703
81
12
1621
64
5
12
17
1.45
14194--14234
22
1.9
21
85
5
55
73
2
4
19
1.13
14781--14833
26
2.0
26
85
7
72
69
1
13
15
1.27
15344--15397
22
2.4
22
79
14
56
75
5
7
11
1.16
15930--15999
27
2.6
27
82
11
72
75
1
11
11
1.11
16401--16447
17
2.7
18
77
12
53
78
0
10
10
0.96
16679--16719
22
1.9
21
85
5
55
75
2
2
19
1.03
17367--17417
16
3.0
17
77
8
50
70
5
7
15
1.30
16980--18350
740
1.8
731
84
10
1720
65
5
12
16
1.42
17493--17545
23
2.3
24
80
9
65
77
1
7
13
1.06
17726--17767
20
2.2
19
87
12
59
76
0
16
7
1.00
17726--17767
19
2.2
20
86
4
59
76
0
16
7
1.00
17771--17830
26
2.3
25
83
13
68
75
3
6
15
1.15
17890--17925
17
2.1
17
89
5
54
75
5
5
13
1.17
18531--18571
22
1.9
21
85
5
55
73
2
4
19
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20295--20334
16
2.5
17
80
19
50
80
0
7
12
0.91
20332--20396
20
3.2
19
77
16
60
80
7
7
4
1.03
20350--20387
12
3.2
12
92
0
58
86
10
2
0
0.66

Tables:   1

The End!