Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168477.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_76, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  122804

Tables:   1   

This is table  1  of  1  ( 84 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1233--1274
2
21.0
2
100
0
84
50
0
0
50
1.00
7406--7480
19
3.9
19
75
5
71
46
2
1
49
1.24
9826--9906
27
3.1
26
77
18
71
61
1
4
32
1.25
9826--9906
26
3.1
26
77
10
76
61
1
4
32
1.25
10119--10159
9
4.3
9
84
9
55
56
0
2
41
1.13
14055--14111
20
2.7
22
76
10
57
36
0
0
63
0.95
15583--15635
22
2.5
22
85
14
76
45
0
0
54
0.99
15662--15699
2
19.0
2
88
0
58
50
2
2
44
1.30
16265--16290
13
2.0
13
100
0
52
30
0
0
69
0.89
16773--16815
17
2.6
17
85
10
54
37
4
2
55
1.33
18210--18256
3
15.7
3
100
0
94
68
0
0
31
0.90
18287--18357
22
3.1
21
77
15
70
12
5
12
69
1.36
18302--18355
22
2.5
22
100
0
108
11
7
11
70
1.34
18299--18363
22
2.8
24
88
11
107
10
7
12
69
1.37
18380--18445
30
2.2
31
81
8
82
53
12
1
33
1.47
22529--22600
34
2.1
35
92
2
119
30
12
13
43
1.82
32311--32336
2
13.0
2
100
0
52
50
0
0
50
1.00
33766--33818
22
2.5
22
85
14
76
45
0
0
54
0.99
33845--33886
2
21.0
2
90
0
66
50
2
2
45
1.27
34441--34478
13
2.8
14
92
4
60
23
2
5
68
1.23
34737--34820
38
2.3
36
80
11
91
69
5
1
23
1.18
34965--35035
28
2.7
25
74
10
70
38
2
2
56
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34944--34999
16
3.4
16
80
9
58
32
3
3
60
1.31
36393--36428
3
12.3
3
94
5
65
66
0
0
33
0.92
36467--36523
21
2.9
21
87
12
77
12
8
14
64
1.48
36534--36599
30
2.2
31
81
8
82
53
12
1
33
1.47
40679--40751
35
2.1
35
94
0
128
30
12
13
43
1.81
45891--45944
23
2.3
23
83
0
63
50
3
22
24
1.65
45971--46038
21
3.4
21
71
16
65
48
0
0
51
1.00
46470--46516
2
23.5
2
86
0
67
42
0
6
51
1.27
48685--48738
22
2.5
22
100
0
108
38
11
9
40
1.73
48830--48889
29
2.1
29
81
6
68
40
5
3
51
1.40
52299--52340
3
14.0
3
94
0
75
66
0
2
30
1.04
52487--52540
24
2.2
26
83
6
67
74
1
3
20
1.07
57197--57238
21
2.0
21
85
0
57
14
4
0
80
0.86
57197--57226
16
1.9
15
93
6
51
16
0
0
83
0.65
57246--57511
60
4.5
60
80
11
300
51
7
8
33
1.60
57269--57549
60
4.8
58
78
13
191
48
6
10
34
1.64
68089--68156
18
3.4
19
82
17
68
80
0
11
7
0.89
68076--68164
32
3.1
28
84
12
94
82
0
11
6
0.85
68078--68164
10
8.5
10
78
13
61
81
0
11
6
0.86
68074--68164
22
4.3
22
79
16
104
80
0
12
7
0.91
73708--73735
2
14.0
2
100
0
56
50
0
0
50
1.00
75168--75220
22
2.5
22
85
14
76
45
0
0
54
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75247--75288
2
21.0
2
90
0
66
50
2
2
45
1.27
75848--75885
13
2.8
14
92
4
60
23
2
5
68
1.23
76355--76409
18
3.2
17
82
7
67
32
1
3
61
1.24
76377--76447
28
2.7
25
74
10
70
38
2
2
56
1.29
76472--76543
30
2.3
33
83
11
98
45
4
1
48
1.30
77778--77827
3
16.7
3
100
0
100
68
0
0
32
0.90
77925--77990
30
2.2
31
81
8
82
53
12
1
33
1.47
82063--82135
35
2.1
35
92
0
119
30
12
12
45
1.78
87111--87159
23
2.2
21
79
17
55
55
2
0
42
1.11
87541--87636
25
3.7
25
73
17
72
45
2
0
52
1.12
87566--87620
23
2.4
24
80
14
62
41
3
0
54
1.18
88037--88071
2
17.5
2
87
0
52
42
0
5
51
1.25
88713--88758
24
1.9
24
82
8
58
30
6
2
60
1.34
90338--90393
29
1.9
29
85
0
76
44
3
3
48
1.37
92133--92166
3
11.3
3
100
0
68
64
0
0
35
0.94
92472--92517
25
1.9
24
83
16
60
39
8
15
36
1.78
92915--92968
21
2.6
21
90
0
81
20
22
20
37
1.95
96460--96508
11
4.5
10
83
16
62
12
2
4
81
0.91
96465--96509
23
2.0
23
91
8
74
13
2
4
80
0.97
96460--96509
16
3.1
16
73
21
50
14
2
4
80
0.95
96722--96756
14
2.4
15
95
4
63
80
0
2
17
0.84
97678--97717
16
2.6
16
92
4
64
52
7
0
40
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100473--100516
3
14.7
3
100
0
88
68
0
0
31
0.90
110801--110855
25
2.3
24
84
6
67
58
7
0
34
1.26
112904--112930
13
2.1
13
100
0
54
81
0
0
18
0.69
113821--113847
7
3.9
7
100
0
54
88
0
0
11
0.50
118198--118311
8
15.5
8
69
17
61
75
0
15
8
1.04
118198--118298
15
7.2
12
71
24
51
74
0
15
9
1.07
118197--118296
14
7.0
14
74
15
71
73
0
16
11
1.10
118199--118265
21
3.2
21
81
14
84
74
0
14
10
1.07
118262--118306
22
2.1
21
91
4
72
77
0
15
6
0.96
118198--118311
41
2.7
40
79
15
113
75
0
15
8
1.04
118241--118311
30
2.4
30
83
9
83
76
0
16
7
1.00
119993--120192
41
4.9
40
81
6
179
23
17
15
44
1.87
120036--120192
42
3.8
41
87
2
208
22
17
15
43
1.87
120036--120192
83
1.9
82
85
3
217
22
17
15
43
1.87
121235--121284
21
2.4
21
89
0
73
32
8
0
60
1.26
121224--121272
3
16.3
3
86
0
71
30
2
0
67
1.02
122141--122191
5
10.2
5
83
12
61
17
1
1
78
0.94
122129--122181
25
2.2
24
82
3
61
13
9
1
75
1.12

Tables:   1

The End!