Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_019168485.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_83, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 108394
ACGTcount: A:0.24, C:0.27, G:0.25, T:0.24


File 2 of 2

Found at i:105897 original size:26 final size:26

Alignment explanation


    Indices: 105868--105920  Score: 97
    Period size: 26  Copynumber: 2.0  Consensus size: 26

     105858 CCGGTCTGAT

                                      
     105868 CTTAGACTGGGAATGAACTCTGTATG
          1 CTTAGACTGGGAATGAACTCTGTATG

                       *              
     105894 CTTAGACTGGGGATGAACTCTGTATG
          1 CTTAGACTGGGAATGAACTCTGTATG

             
     105920 C
          1 C

     105921 CTAAGTCAAC


Statistics
Matches: 26,  Mismatches: 1, Indels: 0
        0.96            0.04        0.00

Matches are distributed among these distances:
  26   26  1.00

ACGTcount: A:0.25, C:0.17, G:0.28, T:0.30


Consensus pattern (26 bp):   
CTTAGACTGGGAATGAACTCTGTATG

Done.