Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168486.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_84, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108167

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1189--1247
30
2.0
30
89
0
91
32
25
23
18
1.97
3782--3814
17
1.9
17
100
0
66
36
12
30
21
1.90
5032--5061
9
3.2
9
95
4
51
63
0
0
36
0.95
5034--5063
10
3.1
10
95
4
53
63
0
0
36
0.95
22676--22715
20
2.0
20
100
0
80
25
30
5
40
1.77
26166--26199
17
2.1
16
89
10
52
41
26
11
20
1.87
31017--31049
17
1.9
17
100
0
66
36
12
30
21
1.90
32057--32127
37
1.9
37
82
2
90
35
19
14
30
1.91
32267--32296
9
3.2
9
95
4
51
63
0
0
36
0.95
32269--32298
10
3.1
10
95
4
53
63
0
0
36
0.95
46688--46734
21
2.2
21
100
0
94
25
10
36
27
1.89
47640--47773
45
3.0
45
69
8
110
27
22
26
23
2.00
49903--49942
20
2.0
20
100
0
80
25
30
5
40
1.77
63564--63611
22
2.2
22
81
7
53
25
31
14
29
1.95
76401--76500
45
2.2
45
89
0
146
26
18
33
23
1.97
78937--78981
19
2.4
19
96
0
81
26
24
20
28
1.99
79088--79145
28
2.1
28
86
0
80
25
31
6
36
1.83
88191--88221
15
2.1
15
93
0
53
35
25
12
25
1.92
95339--95459
44
2.8
44
79
1
145
27
22
22
28
1.99
95461--95549
45
2.0
45
81
0
106
29
22
26
21
1.99
97291--97347
28
2.0
27
83
10
69
35
21
8
35
1.84
98665--98919
126
2.0
126
100
0
510
25
27
10
36
1.90

Tables:   1

The End!