Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167898.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_164, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61869

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
302--331
14
2.1
14
93
0
51
20
0
10
70
1.16
7172--7210
20
2.0
20
84
0
51
15
7
0
76
0.99
11634--11695
25
2.5
25
100
0
124
43
3
0
53
1.17
14831--14893
6
10.3
6
77
16
51
17
1
3
77
0.97
14831--14882
11
4.3
11
80
20
59
15
0
3
80
0.85
14933--14966
15
2.2
16
89
5
52
26
2
2
67
1.19
15020--15077
22
2.6
22
81
15
66
32
5
5
56
1.43
15972--16001
4
7.5
4
100
0
60
23
0
0
76
0.78
16030--16126
6
16.5
6
71
19
71
14
4
2
79
0.97
16016--16126
11
10.8
10
75
14
77
16
4
1
77
1.02
16030--16089
17
3.6
17
82
10
79
13
3
1
81
0.89
16030--16126
21
4.4
21
74
18
83
14
4
2
79
0.97
16030--16126
27
3.3
28
77
15
90
14
4
2
79
0.97
16025--16127
29
3.5
28
75
12
91
14
5
1
77
1.04
16142--16485
59
5.7
57
78
14
363
43
5
13
37
1.67
16143--16486
123
2.9
118
88
6
530
43
5
13
38
1.67
21848--21874
2
13.5
2
100
0
54
48
0
0
51
1.00
23051--23117
31
2.2
31
89
5
100
25
19
23
31
1.98
23602--23706
52
2.0
52
86
0
147
25
27
8
38
1.85
24002--24102
25
4.1
25
79
5
98
20
32
7
38
1.82
24602--24706
52
2.0
52
86
0
147
25
27
8
38
1.85
24731--24762
11
2.9
11
95
0
55
46
28
0
25
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25002--25102
25
4.1
25
79
5
98
20
32
7
38
1.82
23099--26795
1000
3.7
1001
98
0
7033
31
28
9
29
1.89
26007--26107
25
4.1
25
77
7
107
19
35
8
35
1.83
26007--26107
49
2.0
49
83
5
123
19
35
8
35
1.83
26734--26765
11
2.9
11
95
0
55
46
28
0
25
1.53
28502--28552
14
3.6
14
76
23
54
80
7
1
9
0.98
29533--29561
13
2.1
14
93
6
51
20
0
6
72
1.07
29656--29737
30
2.6
31
83
9
96
35
15
1
47
1.54
33234--33564
163
2.0
163
100
0
662
34
17
13
34
1.89
38915--38947
14
2.2
16
89
10
52
75
9
0
15
1.03
39312--39340
11
2.7
11
94
5
51
20
3
6
68
1.27
39971--39999
13
2.1
14
93
6
51
20
0
6
72
1.07
40094--40175
30
2.6
31
83
9
96
35
15
1
47
1.54
42633--42660
11
2.5
11
100
0
56
14
0
7
78
0.95
44683--44739
3
20.7
3
79
13
61
66
0
0
33
0.92
45370--45469
52
1.9
52
89
0
155
28
21
5
46
1.72
46705--46736
13
2.3
15
89
10
50
68
9
6
15
1.36
47045--47086
16
2.6
16
88
0
57
35
7
2
54
1.41
47208--47245
17
2.4
16
86
8
51
21
2
2
73
1.07
51818--51902
43
2.0
43
92
0
143
40
12
3
43
1.60
57137--57180
22
2.0
22
95
0
79
43
13
13
29
1.83
57740--57764
12
2.1
12
100
0
50
24
0
40
36
1.55

Tables:   1

The End!