Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167900.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60120

Tables:   1   

This is table  1  of  1  ( 67 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3276--3808
235
2.3
235
81
7
584
32
8
6
52
1.57
4107--4140
17
2.1
16
89
10
52
17
11
11
58
1.62
7437--7476
12
3.4
12
82
6
55
60
2
0
37
1.11
8610--8692
7
11.7
7
80
10
62
13
2
8
75
1.12
8610--8681
8
9.9
8
80
16
70
13
1
9
75
1.12
8619--8664
13
3.3
13
90
9
65
13
0
13
73
1.09
8612--8681
36
1.9
36
85
5
97
12
1
10
75
1.10
8610--8664
7
7.7
7
90
8
76
14
0
10
74
1.07
8773--8881
24
4.5
24
80
12
114
31
4
5
58
1.41
8793--8881
25
3.6
25
75
18
69
31
4
5
58
1.41
8769--8937
49
3.4
49
77
14
150
28
4
7
59
1.46
8852--8956
54
1.9
54
84
7
140
23
5
12
58
1.56
8965--9013
23
2.0
25
85
14
68
30
2
12
55
1.48
9583--9681
45
2.2
45
83
1
119
20
8
12
59
1.57
14837--14875
20
2.0
20
94
0
69
48
17
7
25
1.74
15202--15382
39
4.5
39
75
16
149
29
13
19
37
1.90
15235--15386
41
3.8
40
76
14
161
30
14
19
34
1.92
19899--19934
2
18.5
2
94
5
65
50
0
0
50
1.00
26675--26721
23
2.1
22
84
4
58
38
2
6
53
1.39
26826--26872
21
2.3
21
77
3
51
38
0
10
51
1.37
28740--28800
32
1.9
32
89
0
95
27
8
3
60
1.41
38381--38509
61
2.1
62
83
2
170
31
3
12
53
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39723--39761
21
1.9
19
85
10
51
58
0
7
33
1.26
39739--39793
27
2.1
26
82
3
65
50
0
10
38
1.37
42236--42269
14
2.4
14
90
0
50
64
5
2
26
1.30
42601--42640
20
2.0
20
100
0
80
25
0
0
75
0.81
45240--45518
59
4.8
59
88
3
395
34
12
7
45
1.71
45240--45514
119
2.4
117
86
7
405
34
13
7
45
1.71
45554--45612
19
3.0
19
82
7
73
77
1
8
11
1.05
45572--45623
27
1.9
27
85
14
72
78
1
7
11
1.02
45554--45625
26
2.9
25
75
18
78
77
1
8
12
1.04
46501--46549
18
2.6
18
77
6
53
73
0
8
18
1.07
46645--46676
10
3.2
10
90
0
55
87
0
0
12
0.54
46732--46792
27
2.2
27
80
11
70
68
3
1
26
1.14
46794--46826
5
6.8
5
96
3
59
84
0
15
0
0.61
47002--47075
1
74.0
1
72
0
58
4
0
9
86
0.69
47002--47075
7
10.6
7
84
9
73
4
0
9
86
0.69
47002--47072
8
8.8
8
86
7
90
4
0
9
85
0.71
47003--47076
15
5.0
14
79
15
69
5
0
9
85
0.75
47082--47614
41
13.1
41
85
8
682
37
22
16
23
1.93
47082--47393
84
3.7
83
89
2
473
37
22
16
24
1.94
47365--47422
29
2.0
29
100
0
116
41
24
13
20
1.89
47327--47463
70
2.0
70
100
0
274
38
24
14
21
1.91
47082--47614
153
3.3
157
87
7
671
37
22
16
23
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47397--47614
83
2.7
81
92
3
357
37
22
16
23
1.93
47844--47907
30
2.1
30
97
0
119
34
9
25
31
1.87
47844--47930
30
2.9
30
87
1
102
33
11
22
32
1.90
48853--48890
8
4.8
8
96
0
67
7
13
0
78
0.94
48877--48934
22
2.5
23
86
5
73
5
13
0
81
0.86
48885--48933
14
3.6
14
83
13
66
6
12
0
81
0.86
48850--48934
8
9.9
8
76
16
57
7
14
0
78
0.94
52791--52997
59
3.5
57
87
7
283
36
13
6
44
1.68
52789--53008
60
3.8
59
86
5
304
35
12
6
45
1.68
53021--53062
22
1.9
22
85
9
59
71
2
11
14
1.24
53044--53111
17
4.2
16
72
12
68
77
1
7
13
1.03
53044--53094
10
5.0
10
78
4
57
80
1
5
11
0.97
53047--53103
10
5.5
10
76
14
53
77
1
7
14
1.06
53059--53110
27
1.9
27
85
14
72
78
1
7
11
1.02
54140--54180
13
3.1
13
86
6
64
80
0
0
19
0.71
54118--54189
16
4.3
16
78
16
67
75
1
1
22
0.96
54121--54178
11
5.5
11
69
22
52
77
1
1
18
0.94
54161--54300
55
2.5
56
76
15
139
66
2
2
27
1.20
54142--54303
27
6.2
26
68
21
101
68
2
2
26
1.15
56091--56191
50
2.0
50
86
0
139
37
13
13
34
1.85
56220--56342
47
2.4
52
76
14
148
23
26
12
38
1.90
56275--56494
116
1.9
114
85
3
307
21
22
16
39
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56557--56713
51
3.0
50
80
5
170
27
20
12
40
1.88

Tables:   1

The End!