Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167909.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_174, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58248

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
729--770
19
2.2
20
86
4
59
26
4
2
66
1.23
1147--1196
16
2.8
18
82
11
59
68
6
0
26
1.13
1178--1216
12
3.2
12
89
7
60
69
12
0
17
1.19
2000--2061
3
21.0
3
82
9
65
64
1
3
30
1.19
2017--2076
32
1.9
30
90
6
93
68
1
3
26
1.15
2244--2453
39
5.4
39
84
6
250
44
21
10
23
1.83
7375--7410
16
2.2
16
90
0
54
30
0
0
69
0.89
7387--7412
13
2.0
13
100
0
52
23
0
0
76
0.78
7790--7836
17
2.8
17
84
9
53
74
4
0
21
0.99
7789--7836
16
2.8
17
81
15
55
72
4
0
22
1.01
8326--8364
21
1.9
21
94
5
71
5
0
15
79
0.90
8645--8674
15
2.0
15
100
0
60
66
6
0
26
1.16
8656--8726
27
2.5
28
90
4
108
69
4
1
25
1.15
25800--25845
23
2.0
23
100
0
92
26
13
26
34
1.92
49269--49349
24
3.6
21
74
18
65
27
1
3
67
1.14
49268--49332
24
2.7
24
83
7
78
26
0
3
70
1.01
49586--49623
19
2.0
19
100
0
76
84
15
0
0
0.63
50083--50144
25
2.4
25
78
7
63
14
4
8
72
1.24
50101--50138
19
2.0
19
89
0
58
21
0
10
68
1.19
50139--50175
19
1.9
19
88
0
56
21
0
5
72
1.04
55671--55991
39
8.3
39
82
4
330
23
11
23
41
1.87
55671--56017
116
3.0
115
84
3
421
23
12
23
41
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56174--56226
3
18.0
3
81
11
56
30
1
1
66
1.13
56158--56218
32
1.9
31
93
3
104
24
3
3
68
1.19
57016--57064
25
2.0
25
83
0
62
18
4
10
67
1.36
57026--57064
12
3.2
12
89
7
60
17
0
12
69
1.19
57046--57096
17
2.8
18
82
5
59
25
0
5
68
1.12
57476--57517
19
2.2
20
86
4
59
66
2
4
26
1.23

Tables:   1

The End!