Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167912.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57599

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3367--3413
23
2.1
21
84
7
58
36
8
10
44
1.70
5884--5920
18
2.1
18
90
10
58
8
10
5
75
1.17
11883--11931
16
3.0
15
80
13
53
51
0
2
46
1.12
14380--14455
12
6.3
12
70
18
52
53
1
5
39
1.32
14649--14692
22
2.0
23
86
4
63
27
2
9
61
1.38
14887--14928
13
3.2
13
86
6
50
26
4
4
64
1.33
15799--15981
90
2.0
90
90
0
285
30
22
4
42
1.73
15970--16070
51
2.0
51
88
3
150
29
12
7
49
1.69
20336--20413
25
3.3
25
63
26
69
33
7
15
43
1.75
24354--24383
2
15.0
2
100
0
60
50
0
0
50
1.00
24381--24405
12
2.1
12
100
0
50
8
0
40
52
1.31
24550--24596
22
2.1
21
84
7
58
36
6
10
46
1.64
25756--26431
231
3.0
228
78
9
761
42
5
11
40
1.64
27058--27094
18
2.1
18
90
10
58
8
10
5
75
1.17
30092--30191
36
2.7
36
75
4
92
52
7
15
26
1.67
31886--31920
18
1.9
18
94
0
61
17
31
25
25
1.97
32978--33026
24
2.2
22
79
20
57
38
6
0
55
1.25
34712--34894
90
2.0
90
96
0
339
40
4
23
31
1.74
35996--36039
22
2.0
23
86
4
63
61
9
2
27
1.38
36234--36310
12
6.3
12
71
16
52
37
5
1
55
1.30
42297--42323
11
2.5
11
100
0
54
55
0
7
37
1.28
44790--44826
18
2.1
18
90
10
58
75
5
10
8
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45448--46143
231
3.0
230
79
10
780
41
12
4
41
1.64
47299--47345
23
2.1
21
84
7
58
46
10
6
36
1.64
55757--55858
51
2.0
52
88
5
154
50
8
11
29
1.69
55847--56024
90
2.0
85
86
7
241
41
4
23
31
1.74
57087--57129
22
2.0
22
90
0
68
58
9
2
30
1.42

Tables:   1

The End!