Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167913.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_178, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57339

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2262--2296
13
2.7
13
91
8
54
25
0
0
74
0.82
3396--3527
3
45.0
3
73
13
78
60
6
3
30
1.36
3926--4552
114
5.5
114
76
4
368
37
13
23
25
1.91
4598--4939
114
3.0
114
78
0
353
38
9
22
28
1.86
4860--4974
54
2.1
54
86
0
158
36
10
22
30
1.88
5811--5881
37
1.9
37
91
0
115
16
15
19
47
1.82
17505--17556
3
17.0
3
88
4
77
61
1
1
34
1.18
27690--27734
19
2.3
20
88
3
65
13
0
64
22
1.28
27710--27800
39
2.4
39
88
1
130
15
1
61
21
1.40
28322--28370
25
1.9
26
91
4
82
46
2
10
40
1.49
28583--28621
20
1.9
21
84
5
53
23
0
7
69
1.14
31751--31802
27
1.9
27
88
7
79
25
5
38
30
1.79
32159--32198
21
1.9
21
89
0
62
27
35
2
35
1.71
41625--42028
203
2.0
203
80
10
457
34
14
6
44
1.72
43200--43253
20
2.7
20
75
13
56
14
5
5
74
1.19
43740--43788
22
2.2
22
88
3
71
61
2
2
34
1.19
44139--44599
231
2.0
231
95
0
832
42
11
13
32
1.80
44636--44675
2
20.5
2
84
5
55
47
2
0
50
1.14
45142--45174
2
17.0
2
87
6
50
48
3
0
48
1.17
47446--47523
29
2.6
29
79
4
84
42
3
2
51
1.34
49851--49889
20
2.0
20
85
10
53
30
20
20
28
1.98
50214--50265
15
3.4
14
80
15
50
11
1
3
82
0.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50230--50272
23
1.9
23
90
4
70
13
2
2
81
0.89
50398--50856
58
7.7
58
83
8
534
44
8
13
33
1.73
54740--54806
11
6.2
11
78
16
68
77
0
14
7
0.97
54740--54798
12
5.1
12
85
6
77
79
0
13
6
0.92
54740--54806
23
3.0
23
82
6
86
77
0
14
7
0.97
54751--54820
17
4.1
17
73
14
54
77
0
15
7
0.98
54750--54813
23
2.9
22
77
11
69
78
0
14
7
0.96
56042--56288
42
6.0
41
90
5
365
22
18
23
36
1.95
56042--56288
123
2.0
125
89
7
380
22
18
23
36
1.95
56295--56389
1
95.0
1
71
0
64
85
9
1
4
0.78
56296--56389
9
10.7
9
75
11
79
85
9
1
4
0.79
56305--56387
16
4.8
16
79
17
87
84
9
1
4
0.82
56296--56389
36
2.6
36
80
11
111
85
9
1
4
0.79
56620--56656
14
2.7
14
80
19
51
32
0
0
67
0.91

Tables:   1

The End!