Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167915.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_18, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 20765110
ACGTcount: A:0.32, C:0.17, G:0.17, T:0.32
Warning! 90000 characters in sequence are not A, C, G, or T
File 103 of 117
Found at i:18996135 original size:899 final size:896
Alignment explanation
Indices: 18994395--18997263 Score: 3878
Period size: 899 Copynumber: 3.2 Consensus size: 896
18994385 TCTGTCCAGT
* * * * * *
18994395 CCCCCGGATCGTCGGAACCCTAATGCTGCCGGTCAGGTTCTACGGCGATGCTCCGACGATGGTGC
1 CCCCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGCTCCGACGATGGTGC
* * *
18994460 CCCGACGAAGAAAAAT-TCTGCACCAGAACATG-TCTGAGCCCAGCATGTGCTGCCGTAACCCTC
66 CCCGACGAAGAAAAATGT-GGCACCAGCACATGCTC-GAGCCCAGCATGTGCTGCCGCAACCCTC
** * *
18994523 GGTCCAGTACAATCTTAGATTGGCAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATG
129 GGTCC-GGCCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATG
* * * * *
18994588 CTTAAGTCAACCAATGAAACGAGCGTACAGGCGTTCAGCTGGCCAGAAGGGCGGGATGCGTC-AG
193 CCTAAGTCAACCCACGAAACGAGCGTACGGGCGTTCAGCTGGCCAGAGGGGCGGGATGCG-CAAG
* * * * * * *
18994652 CCAAGGATCGATCAGGTCCCCTTCTGCGTGCTATCGATCCTGCTACCGTAATCCTTGGTCTGGT-
257 CCAGGGATCGACCGGGTCCCCATCTACGTGCTATCGATCCTGCTGCCGCAA-CCTTGGTCTGGTC
* * * * * * * *
18994716 CTGATCTTAGATTGGGAATGCACTCTGTACGCCTAAGCCAATCGATGGAATGAGCGGGCGGGCGG
321 CT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGC-GG-GA
* *
18994781 GCCGGCGGGCACTACGCTGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
383 G--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
18994846 TGGGTTTAGGCACATCTTCATATTTCTGTGTTCCAATTCC-TTTTTTATGGCTTGTAAATTCATA
446 TGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTTATGGCTTGTAAATTCATA
18994910 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
511 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
*
18994975 TTTTTAAAAGTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC-GAAAGGATTTTTGGCCCCAAA
576 TTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAG-AAGGATTTTTGGCCCCAAA
* *
18995039 CTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAT-AAAAAAATTCAGCTAAAAACTC-GA
640 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT-CCTCAAAAAAATTCAGCTAAAAACTCGGA
* * * * *
18995102 TCTGAACAAGATTTTGTGACCTTTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCCACTG
704 -GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * * *
18995167 GCAGTAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCT-AGGTTTGAAGAGG
768 GCAGAAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTT-TTTGAGGTTTGATGAGG
* * * *
18995231 GATAGGGGGCCAATATAAGGGCCAAGTACCATCACCCATCCCACATCATTTGCGCACACCCCCCG
831 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCACACACCCCCCG
18995296 G
896 G
* *
18995297 TCCCCCCGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTG
1 -CCCCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGCTCCGACGATGGTG
* *
18995362 CCCCGACGAAGAAAAATGTGGCACCAGCACATGCTTGAGCCCAACATGTGCTGCCGCAACCCTCG
65 CCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCG
*
18995427 GTCCGGCCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGC
130 GTCCGGCC-AATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
18995492 CTAAGTCAACCCACGAAACGAGAGTACGGGTGCTCAGCTGGCCATAGGGGCGGGATACGCAAGCC
194 CTAAGTCAACCCACGAAACGAGCGTACGGGCGTTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCC
* * * * * *
18995557 GGGGATCGACCGGGTCCCCCTCTTCATGCTA-CTAATCCTACTGCCGCAACCGTTGGTCTGGTCC
259 AGGGATCGACCGGGTCCCCATCTACGTGCTATC-GATCCTGCTGCCGCAACC-TTGGTCTGGTCC
18995621 TATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGAGGGC
322 TATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGAGGGC
* * ** **
18995686 AGGCACTACACCGGCCAGAGAGACGGGATAAGCAAGTTGTGGATCGATAGGGTGGTAGGTGGGTT
387 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
*
18995751 TAGGCACATCTTCAAATTT-TGTGTGCCAATGCCATTTTTTATGGCTTGTAAATTCATACAATGG
452 TAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTTATGGCTTGTAAATTCATACAATGG
* * * * *
18995815 TCCCTTAAGCCTTCTCGTGAAGTTTCATGGCAAGACGTCTCGTTTTCCATTTTTCACGATTTTCA
517 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTA
* *
18995880 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTA
582 AAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTA
* * *
18995945 GACATGATCCTTGTATTTTTGTTGGCATCCTCAAAAACAGTCAGCTAAAAACTCGGAGTGTACAA
647 GACGTGATCCTTGTATTTTTGTTGGCATCCTCAAAAAAATTCAGCTAAAAACTCGGAGTGTACAA
* *
18996010 GAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAA
712 G-ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGAAAA
*
18996075 CCTGTAAAATCTCAAATGCTCTTTAAGGGGTATGAGTTTTTGAGGTTTGATGAGGGATAGGGGGC
776 CCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATAGGGGGC
* * * *
18996140 CAATATAAGGGCCAAGTACCAGCACCCATCGCATATCATGTGCTCACTCCCCCCTCGG
841 CAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCACAC-ACCCCC-CGG
* * * *
18996198 CCCCCTCGATCGTCGGAACCCCAAGGCCGTCGGTCAGGTTCTCCGACAATGCTCCGACGATGGTG
1 CCCCC-CGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGCTCCGACGATGGTG
* * * * *
18996263 CCCCGACAAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGGATGTGTTGCCGCAACCCTCG
65 CCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCG
* * * *
18996328 GTCTGATCCGATCTTATACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGC
130 GTCCG-GCCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGC
* * ** *
18996393 CTAGGTCAACCCAC-TAACGAGCGTGTGGGCGTTCAGTTGGCCAGAGGGGCGGGATGCGCAAGCC
194 CTAAGTCAACCCACGAAACGAGCGTACGGGCGTTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCC
* ** *** *
18996457 AGGGATCGACCGGGTCCCCATCTACGTGCTGTCGATCCTGCTGTTGCAACCCTTGGTCCAATCCA
259 AGGGATCGACCGGGTCCCCATCTACGTGCTATCGATCCTGCTGCCGCAA-CCTTGGTCTGGTCCT
* * * *
18996522 ATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACAAAATGAGCGGGCGGGCGGGTG
323 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGAGGGCG
* *
18996587 GGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGTATCGATAGGGTGGTAGGTGGGTTT
388 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* ** * *
18996652 AGGCACATCTTCCTATTTCTGCATGCCAATG-CAGTTTTTATGCCTTGTAAATTCATACAATGGT
453 AGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTTATGGCTTGTAAATTCATACAATGGT
* *
18996716 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCATGATTTTTGA
518 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAA
* * ** *
18996781 AACGTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAATATTTTTGG-CCCAAACTTGATAG
583 AACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAG
* * * *
18996845 ACGTGATCCTTGTATTTTTGCTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
648 ACGTGATCCTTGTATTTTTGTTGGCATCCTCAAAAAAATTCAGCTAAAAACTCGGAGTGTACAAG
** * *
18996910 ATTTTGTGACCATTTGAAAAGGGTGTCCCCATTTCAGATACTTTAATGGCTACAGGCAGAAAACC
713 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGAAAACC
* * *
18996975 TGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAAGGATAGGGGGCC
778 TGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATAGGGGGCC
* *
18997040 GATATAAGGGCCAAGTTCCAGCACCCATCACACATCATGTGCACACACCCCCCCGG
842 AATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCACACA-CCCCCCGG
* * * * * **
18997096 CCACCCTGATCGTCGAAACCCAAATACTGCCGATCAGGTTCTCCGACGATGCTCCGGTGATGGTG
1 CC-CCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGCTCCGACGATGGTG
* * * * * * * **
18997161 ACCCGATGAAGAAAAATATGACACCAGCACAAGCTCGAGCCCAGCTTGTGTTGCTACAACCCTCG
65 CCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCG
*
18997226 GTCCGGTCCAATC-TAGACTGGGAATGAACTCCGTATGC
130 GTCCGG-CCAATCTTAGACTGGGAATGAACTCCATATGC
18997264 CTAAGCCAAC
Statistics
Matches: 1734, Mismatches: 208, Indels: 54
0.87 0.10 0.03
Matches are distributed among these distances:
897 23 0.01
898 212 0.12
899 514 0.30
900 451 0.26
901 201 0.12
902 10 0.01
903 319 0.18
904 4 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
CCCCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGCTCCGACGATGGTGC
CCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
TCCGGCCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCT
AAGTCAACCCACGAAACGAGCGTACGGGCGTTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCCAG
GGATCGACCGGGTCCCCATCTACGTGCTATCGATCCTGCTGCCGCAACCTTGGTCTGGTCCTATC
TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGAGGGCGGGC
ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
CACATCTTCATATTTCTGTGTGCCAATGCCATTTTTTATGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAAC
TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACG
TGATCCTTGTATTTTTGTTGGCATCCTCAAAAAAATTCAGCTAAAAACTCGGAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGAAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCACACACCCCCCGG
Found at i:18996376 original size:26 final size:26
Alignment explanation
Indices: 18996340--18996392 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18996330 CTGATCCGAT
*
18996340 CTTATACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
18996366 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
18996392 C
1 C
18996393 CTAGGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:18997981 original size:26 final size:26
Alignment explanation
Indices: 18997952--18998007 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
18997942 CCGATCAGAT
*
18997952 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
18997978 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18998004 CTTA
1 CTTA
18998008 AGCCAACCGA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18998731 original size:26 final size:27
Alignment explanation
Indices: 18998686--18998740 Score: 94
Period size: 26 Copynumber: 2.1 Consensus size: 27
18998676 GGTCCGATCT
18998686 TAGACTAGGAAATGAACTCTGTATGCC
1 TAGACTAGGAAATGAACTCTGTATGCC
*
18998713 TAGACT-GGGAATGAACTCTGTATGCC
1 TAGACTAGGAAATGAACTCTGTATGCC
18998739 TA
1 TA
18998741 AGTCAACCCA
Statistics
Matches: 27, Mismatches: 1, Indels: 1
0.93 0.03 0.03
Matches are distributed among these distances:
26 21 0.78
27 6 0.22
ACGTcount: A:0.31, C:0.18, G:0.24, T:0.27
Consensus pattern (27 bp):
TAGACTAGGAAATGAACTCTGTATGCC
Found at i:18999635 original size:25 final size:26
Alignment explanation
Indices: 18999585--18999636 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18999575 CCGGTCCGAT
18999585 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18999611 CTTAGACTGGGAATG-ACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18999636 C
1 C
18999637 CTAAGCCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 11 0.42
26 15 0.58
ACGTcount: A:0.25, C:0.21, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19000353 original size:25 final size:26
Alignment explanation
Indices: 19000316--19000367 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
19000306 CTGGTCCGAT
19000316 CTTAGACTAGGAAAGAACTC-GTATG
1 CTTAGACTAGGAAAGAACTCTGTATG
* *
19000341 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAAAGAACTCTGTATG
19000367 C
1 C
19000368 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 18 0.75
26 6 0.25
ACGTcount: A:0.31, C:0.17, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAAAGAACTCTGTATG
Found at i:19001266 original size:25 final size:26
Alignment explanation
Indices: 19001216--19001267 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19001206 CCGGTCCGAT
19001216 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19001242 CTTAGACTGGGAATG-ACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19001267 C
1 C
19001268 CTAAGCCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 10 0.40
26 15 0.60
ACGTcount: A:0.25, C:0.19, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19001941 original size:25 final size:26
Alignment explanation
Indices: 19001904--19001955 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
19001894 TTGGTCTGAT
19001904 CTTAGACTAGGAAAGAACTC-GTATG
1 CTTAGACTAGGAAAGAACTCTGTATG
* *
19001929 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAAAGAACTCTGTATG
19001955 C
1 C
19001956 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 18 0.75
26 6 0.25
ACGTcount: A:0.31, C:0.17, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAAAGAACTCTGTATG
Found at i:19002833 original size:26 final size:26
Alignment explanation
Indices: 19002804--19002856 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19002794 CTGATCCGAT
19002804 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19002830 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19002856 C
1 C
19002857 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19003497 original size:26 final size:26
Alignment explanation
Indices: 19003468--19003520 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19003458 TTGATCCGAT
19003468 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19003494 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19003520 C
1 C
19003521 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19004397 original size:25 final size:26
Alignment explanation
Indices: 19004369--19004420 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19004359 CTGATCCGAT
19004369 CTTAGA-CCGGAATGAACTCCGTATG
1 CTTAGATCCGGAATGAACTCCGTATG
** *
19004394 CTTAGATTGGGAGTGAACTCCGTATG
1 CTTAGATCCGGAATGAACTCCGTATG
19004420 C
1 C
19004421 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 1
0.85 0.11 0.04
Matches are distributed among these distances:
25 6 0.26
26 17 0.74
ACGTcount: A:0.25, C:0.21, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGATCCGGAATGAACTCCGTATG
Found at i:19004954 original size:26 final size:26
Alignment explanation
Indices: 19004918--19004993 Score: 134
Period size: 26 Copynumber: 2.9 Consensus size: 26
19004908 CCGATCCAAT
* *
19004918 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGGCTGGGAATGAACTCCGTATG
19004944 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGGCTGGGAATGAACTCCGTATG
19004970 CTTAGGCTGGGAATGAACTCCGTA
1 CTTAGGCTGGGAATGAACTCCGTA
19004994 CGCCTAAGTC
Statistics
Matches: 48, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.25, C:0.18, G:0.29, T:0.28
Consensus pattern (26 bp):
CTTAGGCTGGGAATGAACTCCGTATG
Found at i:19007408 original size:20 final size:20
Alignment explanation
Indices: 19007383--19007426 Score: 79
Period size: 20 Copynumber: 2.2 Consensus size: 20
19007373 AGGTTTGATG
19007383 AGGGATAAGGGGCAAATATA
1 AGGGATAAGGGGCAAATATA
*
19007403 AGGGATAAGGGGCGAATATA
1 AGGGATAAGGGGCAAATATA
19007423 AGGG
1 AGGG
19007427 CCAAGTACTA
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
20 23 1.00
ACGTcount: A:0.41, C:0.05, G:0.41, T:0.14
Consensus pattern (20 bp):
AGGGATAAGGGGCAAATATA
Found at i:19007658 original size:26 final size:25
Alignment explanation
Indices: 19007618--19007696 Score: 131
Period size: 26 Copynumber: 3.0 Consensus size: 25
19007608 CCAGTTCGAT
19007618 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACT-GGAATGAACTCCGTATG
19007644 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGG-AATGAACTCCGTATG
19007670 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACT-GGAATGAACTCCGTATG
19007696 C
1 C
19007697 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 0, Indels: 4
0.93 0.00 0.07
Matches are distributed among these distances:
25 2 0.04
26 47 0.92
27 2 0.04
ACGTcount: A:0.28, C:0.22, G:0.24, T:0.27
Consensus pattern (25 bp):
CTTAGACTGGAATGAACTCCGTATG
Found at i:19008045 original size:159 final size:159
Alignment explanation
Indices: 19007670--19008037 Score: 533
Period size: 159 Copynumber: 2.3 Consensus size: 159
19007660 ACTCCGTATG
*
19007670 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCACC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCACC
* *
19007735 CGGCCAGAGGGGTGGGATGCACAGGCCGAGGATCGATCGGGTCCCCCTCTGCATGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCATGCTATCGATCC
* * *
19007800 TGCTGTAGCAACCCTCGGTCTGGTCTGAT
131 TGCTGTAGCAACCCTCGGTCCGATCAGAT
* *
19007829 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCACC
* * * * *
19007894 TGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCG-GCTGGGTCCCCCTCTGCGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATC-GGGTCCCCCTCTGCATGCTATCGATC
* *
19007958 CTGCTGTCGCAACCTTCGGTCCGATCCAG-T
130 CTGCTGTAGCAACCCTCGGTCCGAT-CAGAT
* * * *
19007988 CTTGGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
19008038 AGGCGGGCAG
Statistics
Matches: 188, Mismatches: 19, Indels: 4
0.89 0.09 0.02
Matches are distributed among these distances:
158 1 0.01
159 185 0.98
160 2 0.01
ACGTcount: A:0.22, C:0.30, G:0.29, T:0.19
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCACC
CGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCATGCTATCGATCC
TGCTGTAGCAACCCTCGGTCCGATCAGAT
Found at i:19008744 original size:26 final size:26
Alignment explanation
Indices: 19008708--19008759 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
19008698 CCGATCCGAT
*
19008708 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19008734 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19008760 GCTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.31, C:0.17, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19009831 original size:26 final size:26
Alignment explanation
Indices: 19009795--19009873 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
19009785 CTGGTCCAAT
19009795 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19009821 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
**
19009847 CTTAGACTATGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19009873 C
1 C
19009874 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.28, C:0.20, G:0.24, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19010147 original size:159 final size:159
Alignment explanation
Indices: 19009847--19010202 Score: 464
Period size: 159 Copynumber: 2.2 Consensus size: 159
19009837 ACTCCGTATG
** * * *
19009847 CTTAGACTATGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCACTCAGC
* * *
19009912 CGGCCAGAGGGGTGGGATGCACAGGTCGGGGATCGACCGGGTCCCCCTCTACATGCTATCGATCC
66 CGACCAGAGGGGCGGGACGCACAGGTCGGGGATCGACCGGGTCCCCCTCTACATGCTATCGATCC
*
19009977 TGCTGTAGTAACCCTCGGTCTGGTCCGAT
131 TGCTGTAGTAACCCTCGGTCTGATCCGAT
* *
19010006 CTTAGACTGGGGAATGAACTCTGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAG
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCACTCAG
* * * *
19010071 CCGACCAGAGGGGCGGGTACGTA-A-GTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGAT
65 CCGACCAGAGGGGCGGG-ACGCACAGGTCGGGGATCGACCGGGTCCCCCTCTACATGCTATCGAT
* * * * *
19010134 CTTGCTGTCGTAACCTTTGGTCTGATTCGAT
129 CCTGCTGTAGTAACCCTCGGTCTGATCCGAT
* * * *
19010165 CTTGGACTTGGAATGAACTCCGTCTGCCTAACTCAACC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
19010203 GATGAAACGA
Statistics
Matches: 170, Mismatches: 25, Indels: 5
0.85 0.12 0.03
Matches are distributed among these distances:
158 26 0.15
159 76 0.45
160 65 0.38
161 3 0.02
ACGTcount: A:0.21, C:0.28, G:0.28, T:0.22
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCACTCAGC
CGACCAGAGGGGCGGGACGCACAGGTCGGGGATCGACCGGGTCCCCCTCTACATGCTATCGATCC
TGCTGTAGTAACCCTCGGTCTGATCCGAT
Found at i:19011100 original size:26 final size:26
Alignment explanation
Indices: 19011064--19011142 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
19011054 CTGGTCCAAT
19011064 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19011090 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
**
19011116 CTTAGACTATGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19011142 C
1 C
19011143 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.28, C:0.20, G:0.24, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19012022 original size:26 final size:26
Alignment explanation
Indices: 19011982--19012032 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
19011972 TGGTCCGATC
*
19011982 TTAGACTGGGTATGAACTCCATATGG
1 TTAGACTGGGAATGAACTCCATATGG
*
19012008 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCATATG
19012033 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGG
Found at i:19012913 original size:26 final size:26
Alignment explanation
Indices: 19012884--19012959 Score: 143
Period size: 26 Copynumber: 2.9 Consensus size: 26
19012874 CCGGTCCGAT
19012884 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19012910 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19012936 CTTAGACTGTGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
19012960 GGCCTGAGTC
Statistics
Matches: 49, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 49 1.00
ACGTcount: A:0.28, C:0.20, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19013843 original size:26 final size:26
Alignment explanation
Indices: 19013803--19013855 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19013793 CCAATCTGAT
*
19013803 CTTAGATTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
19013829 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
19013855 C
1 C
19013856 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:19014727 original size:26 final size:26
Alignment explanation
Indices: 19014698--19014750 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19014688 CCAGTCCGAT
19014698 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
19014724 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
19014750 C
1 C
19014751 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19016899 original size:867 final size:858
Alignment explanation
Indices: 19014926--19017142 Score: 2906
Period size: 867 Copynumber: 2.5 Consensus size: 858
19014916 GGTTTGGGAT
* * *
19014926 TTTTTAAAATTATTTCGGAAGGCA-TTTTGGCCCCAAAC-TGATTAGACCTGATCCTTGTATTTT
1 TTTTTAAAATTTTTTC-GAAGG-AGTTTTGGCCCCAAACTTG-GTAGACGTGATCCTTGTATTTT
*
19014989 TATTGGCATGCACAAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
63 TGTTGGCATGCACAAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
19015054 AAAAAGTGT-CCTCATTTCAGACACTTTAACGGCTAGTGGTAGCAAACCTGTAAAATCTCAAATG
127 AAAAAGTGTCCCTC-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
19015118 CTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGGGGGATAGGGGGCCAATATAAGGGCCAAGT
191 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT-GGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
19015183 ACCAGCACCCATCGCACATCATGTGTGCACACCCCCGCGACCCCACCGATCGTCGGAACCCTAAA
255 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCG-G-CCCCCCCGATCGTCGGAACCC-AAA
* * *
19015248 -GCCGCCGGTCAGGTTCTCCGAAGATGCTCCGACGATGGTGCCTCGATGAAGAAAAATACGGCAC
317 TGCCGCCGGTCAGGTTCTCC------G----G-CGATGGTGCCCCGACGAAGAAAAATATGGCAC
* *
19015312 CAGCACATGCTCGAGCCCAGCATGTGCTG-TCGCAACCCTCGGTCTGATCTGATCTTAGACCGGG
371 CAGCACATGCCCGAGCCCAGCATGTGCTGCT-GTAA-CC-C--TC-G----G----T----C---
* * *
19015376 AATGAACTCCGTATGCTTAGAATGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGC
415 --TG-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGC
* **
19015441 GTACGGGCGCTCAGCCGGCCAGACGGGTGGGATGCGCAAGTCGGGGATCGATCGGGTCCCCCTCT
474 GTACGGGCGCTCAGCCGGCCAGACGGGCGGGATGCGCAAGTCGGGGATCGATCGGCCCCCCCTCT
* * * * *
19015506 ACGTGATGCCAATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGCAATGAACTTC
539 ACATGATACCAATCCTGCTACCACAACCCTCAGTCCGGTCTGATCTTAGACTGGCAATGAACTCC
* *
19015571 GTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGTGGCCGGCCACTACGTCGGCCAGAGAGAC
604 GTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGTGGCCGGCCACTACGCCAGCCAGAGAGAC
* * * *
19015636 AGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCCCCTCTTCATATTTCTGAA
669 AGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGAA
*
19015701 TGCCAATGCCATTTTTAGGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
734 TGCCAATGCCATTTGTAGGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* *
19015766 CATGGGAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACATTTTACGGTTCAGGA
799 CATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTAAAACATTTTACGGTTCAGGA
* * ** *
19015826 TTTGTTAAAATTTTTTTGAAGAAGTTTTCACCCCAAACTTGGTAGACGTGATCCTTTTATTTTTG
1 TTT-TTAAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * * * * *
19015891 TTGGCATGCAAAAAAAAATTAAGCTAAAAACTCGAAGTCTACAGGATTCTATGACCATTTGAAAA
65 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * *
19015956 GAGTGTCTCC-ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTTAAATCTCAAATGCTC
130 AAGTGTC-CCTCTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
*
19016020 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
194 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT-GGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
19016085 AGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCGCCAGAACCCAAATGCCG
258 AGCACCCATCGCACATCATGTGCGCACACCCCC-GGCCCCCCCGATCGTCGGAACCCAAATGCCG
* *
19016150 TCGGTCAGGTTCTCCGGCGATGGTGCCCCGGCGAAGAAAAATATGGCACCAGCACATGCCCGAGC
322 CCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGC
19016215 CCAGCATGTGCTGCTGTAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCC
387 CCAGCATGTGCTGCTGTAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * **
19016280 TAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCTTAAGAT-
452 TAAGTCAACCCATGAAACAAGCGTACGGGCGCTCAGCCGGCCAGACGGGCGGGATGCGCAAG-TC
* * * * *
19016344 GGGGATCGATCAGGCCCCCCCTCTACATGCTATCGATCCTGCTACCGCAACCCTCAGTTCGGTCT
516 GGGGATCGATC-GGCCCCCCCTCTACATGATACCAATCCTGCTACCACAACCCTCAGTCCGGTCT
* * *
19016409 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGTAAGTGGGT
580 GATCTTAGACTGGCAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GG--A-CGGGT
* ** ** *
19016474 GGGCGGGTACTACGCCAGCCAGAGAGATGGGATGCGCAAGCCATGGATCAATAGGTTGGTAGGTG
641 GGCCGGCCACTACGCCAGCCAGAGAGACAGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTG
* * *
19016539 GGTTTAGGCACATCTTCATATTTCTGCATGTCAATGCCATTTGTATGGCTTGTAAATTCATACAA
706 GGTTTAGGCACATCTTCATATTTCTGAATGCCAATGCCATTTGTAGGGCTTGTAAATTCATACAA
*
19016604 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTT
771 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTT
* * *
19016669 TTAAAACTTTTTGCGGTTCTGGA
836 TTAAAACATTTTACGGTTCAGGA
19016692 TTTTTCAAAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
1 TTTTT--AAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
*
19016757 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGATGTGTACAAGATTTTGTGACCATTTGAAA
64 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
19016822 AAAGTGTCCCTCTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGGTC
129 AAAGTGTCCCTCTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
19016887 TTTAACGGGGTGTGAGTTCTCAAGGTTTGATGGAGGATAGGGGGCCAATATAAGGGCCAAGTACC
194 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGG-GGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
19016952 AGCACCCATCGCACATCATGTGCGCACACCCCCCGGGCCCCCCGATCATCGGAACCCCAATGCTG
258 AGCACCCATCGCACATCATGTGCGCACA-CCCCCGGCCCCCCCGATCGTCGGAACCCAAATGCCG
* * * * * *
19017017 CCGGTCAGGTTCTCCGACGA---TGACCCGACAAAGATAAATCTGGCACCAGGACATGCCCGAGC
322 CCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGC
* * * ** *
19017079 CCAGCATCTGCTACCGTAACCCTCGGTCCAATCCAATCTTAGACTGGGAATGAACTCCGTATGC
387 CCAGCATGTGCTGCTGTAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
19017143 TTAGACTGGG
Statistics
Matches: 1177, Mismatches: 121, Indels: 74
0.86 0.09 0.05
Matches are distributed among these distances:
861 92 0.08
862 95 0.08
863 6 0.01
864 95 0.08
865 5 0.00
866 206 0.18
867 299 0.25
868 5 0.00
870 1 0.00
874 1 0.00
878 1 0.00
882 1 0.00
883 2 0.00
885 1 0.00
886 2 0.00
887 59 0.05
888 2 0.00
892 1 0.00
897 3 0.00
898 36 0.03
899 192 0.16
900 57 0.05
901 15 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (858 bp):
TTTTTAAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
AGTGTCCCTCTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
TAAGGGGGTGTGAGTTCTCGAGGTTTGATGGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
ACCCATCGCACATCATGTGCGCACACCCCCGGCCCCCCCGATCGTCGGAACCCAAATGCCGCCGG
TCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAG
CATGTGCTGCTGTAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
TCAACCCATGAAACAAGCGTACGGGCGCTCAGCCGGCCAGACGGGCGGGATGCGCAAGTCGGGGA
TCGATCGGCCCCCCCTCTACATGATACCAATCCTGCTACCACAACCCTCAGTCCGGTCTGATCTT
AGACTGGCAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGTGGCCGGCCAC
TACGCCAGCCAGAGAGACAGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTAGGCA
CATCTTCATATTTCTGAATGCCAATGCCATTTGTAGGGCTTGTAAATTCATACAATGGTCCCTTA
AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTAAAACATT
TTACGGTTCAGGA
Found at i:19017152 original size:26 final size:26
Alignment explanation
Indices: 19017116--19017168 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19017106 CCAATCCAAT
19017116 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19017142 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19017168 C
1 C
19017169 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19021872 original size:26 final size:26
Alignment explanation
Indices: 19021843--19021895 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19021833 CTGGTCCGAT
19021843 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19021869 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19021895 C
1 C
19021896 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19022327 original size:899 final size:898
Alignment explanation
Indices: 19019199--19032557 Score: 16477
Period size: 887 Copynumber: 15.0 Consensus size: 898
19019189 CCGGTCTGAT
* * * *
19019199 CTTAGGCTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGCATGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
19019264 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGATCCCCCTCTGCGTGCTGCCAATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
19019329 TGCTACTGCAACCCTCGGTTTGGT-TCGATCTTGGACTGGGAATGAACTCCGTATGCATAAGCCA
131 TGCTGCCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * *
19019393 ACCGACG-AA--A-CGAGCGGGCGGGTAGGCACTACGCCGGCCAGAGAGACGAGATGTGCAAGCC
195 ACCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * **
19019454 GTGGATCGATAGGATGGTAGGTGGGTTTAAGTGCATCTTCATATTTCTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
19019519 TTATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCACGTGAAGTTTCATGGCAGGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * *
19019584 TCATTTTCTATTTTTCATGATTTTTTAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTTGG
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGG
* * *
19019649 AAGGAGTTTTGTCCCCAAACATGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAACA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
19019714 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
19019779 CACTTTAATGGCTACTGGCAGCAAACTTGT-AAATCTCAAATGCACTTTAGGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
19019843 TCAAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA-
* * *
19019908 GTGTGTGCACCCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
714 -TGTGCGCACACCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * **
19019973 GATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCAT
778 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
** * * *
19020038 GTGCTGGTGCAACCCTTGGTCTGATCCGATCTTAGACT-----TG------GAATG
843 GTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
19020083 ---A-ACT----A--AA-----TATGCCTAAGTCAACCCACGAAACGTGTGTACGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * **
19020133 CGGCCAGAGGGGAGGGATGCGCAAGCCGAGGATCAATCAGGTCCCCCTCTATGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * **
19020198 TGCTGCCACAACCCTTGGT-TCGGTCTGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
19020262 ACCGACGAAACAAACG-GCCGGGCGGGTGGGCACTACGCCGGCCAGAGAGACAGGATGCACAAGC
195 ACCGACGAAACGAGCGAG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
*
19020326 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCATT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
19020391 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
19020456 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCG
389 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCG
* * *
19020521 GAAAGAGTTTTGTCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAGAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * * * *
19020586 ATTTAGCCAAAAACGCGTAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAA
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
19020651 ACACTTTAATGGCTACTGGCAGTAAAACTGTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
19020716 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
** * * * * *
19020781 TGTATGCACACCCTCC-GGTCCCCCAATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCC-AG
714 TGTGCGCACACCC-CCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA-
** * * *
19020844 CGAAACTCC-AGCGATGGTGCCCCGATGAAGAAAAATGCGACACCAACACATGCCCGAGCCCAGC
777 CGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * *
19020908 ATGTGCTACCGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCATATT
841 ATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
19020966 TTTAGATTCGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * **
19021031 CGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCGACCGGGTCCCACTCTTCGTGCTGCTTATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * *
19021096 TGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGTAAGGAACTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
19021161 CTGACAAAACGAGCGGACGGGCGGGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGC-GA---GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
19021226 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTACGTGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
** * *
19021291 TTTTTATTTCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGAT
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
19021356 GACTCGTTTTCTATTTTTCACAAATTTTGAAACTTTTTGCGGTTC-GAGATTTTTTAAAATTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAG-GATTTTTTAAAATTTTT
**
19021420 TCGGAAGGAGTTTTGGCCCCAAACTTTTTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAA
451 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * *
19021485 AAAATTCAGCTAAAAACTCGATGTGTACAAGATTTTTTGACCAATTGAAAAATGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
19021550 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
19021615 GTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATAAAATGGCCAAGTACCAACACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
19021680 TCATGTGCGCACACCCCCTGGCCCCCCCGATCACCGAAACCCCAATGTCGCCGGTCAGGTTCTCC
711 TCATGTGCGCACACCCCCTGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * * * *
19021745 GGCGATGCTCCGATGATGGGGCCCCGACGAAGAAAAATGTGGTACCACCACATGTCCGAGCCCAG
775 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* *
19021810 CATGTGCTACCGTAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
840 CATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
19021869 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAAGAGCGTGCAGGCGCT-ACC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA-G
* * * * *
19021933 CCGGCCAGAGGGGCGGGATGTGCAAGCCGGAGATCGGTCGGGTGCCCCTCTGTGTGCTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATC
** * * * * *
19021998 CTGCTATCACAACCCTTGATCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATACCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
19022063 ACCAATGAAACGAGCGAGCGGGGGGGCGGGCACTACGTCAGCCAGAGAGACGGGATGCACAAGCC
195 ACCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
19022128 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTTTACGTGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
19022193 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGATGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
*
19022258 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTTAAATTTTTTCGG
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGG
* * * *
19022323 AAGGATTTTTTGCCTCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
19022388 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
19022453 CACTTTAATGGCTACTGGCAACAAACCTGAAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * * * *
19022518 TTGAGGTCTCATGAGGGATAGGGGGCCAATATAGGGGCCAAGTACTAGCACCCATCGCACATCAC
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
19022583 GCGCGCACACCCCCCGGCGCCCCGATCGTCGGAACCCCAAAGCCGTCGGTCAGGTTCT-C--C--
715 GTGCGCACACCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
* * *
19022643 -G----G-CGATGGGGCCCCGACGAAGAAAAATGCGGCACTAGCACATGCTCGAGCCCAGCATGT
780 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * *
19022702 GCTGTCGCAACCCTCGGTCTCGTTCGATCTTAGACTGGGAATGAACTCCGTATG
845 GCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
19022756 CTTAGACTGGGAACGAACTCCATATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * * ** ** **
19022821 CGGCCAGAGGGATGGGATGCGCAACCCGGGGATTGGTCGGGTCTCCCTATATGTTTTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
19022886 TGCTGCCACAACCCTTGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTCAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
19022951 CCGATGAAACGAGCGGGCGGGCGGGTGGGTACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
19023016 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * * * *
19023081 TATGGCTTGCAAATTCTTACAATAGTCCCTTAAGCCCTCACGTGAAGTTCCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
19023146 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCAG
391 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAG-GATTTTTTAAAATTTTTTCGG
* *
19023210 AAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGTACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
19023275 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
19023340 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGCGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
19023405 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
*
19023470 GTGCGCACACCCCCCCGGCCCCCCCGATCGTCAAAACCCTAATACCGTCGGTTGGCCCCCCCCGA
715 GTGCGCACA-CCCCCTGG--CCCCC---CG-------------A---TC-----G------CCG-
* * * * * * *
19023535 TCATCGAAACCCCAATACCGTCGGTCAGGTTCTCTGGCGATTCTCCAACGATGGTGCCCCGAGGA
746 -----G-AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGA
* * * * *
19023600 AGAAAAACGTGTCACCAGCACATGCTCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCTATTC
805 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG--------
19023665 CATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
862 -----T---CT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATG
* * ** * *
19023720 CTTAGAGTGGGAATGAACTCAGTATGCCTAAGTCAACCCATTAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
19023785 TGGCCAGAGGGTCAGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * *
19023850 TGCTATCGTAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
19023915 CCGATG-AA--A-CGA----GCGGGCGAGCACTACGTCGACCAGAGAGACGGGATGTGCAAGCCA
196 CCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
19023972 TGGATCGATAGTGTGGTAGGTGTGTTTAGGCACATCTTTCATATTTTTGCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC-TTCATATTTCTGCATGCCAATGCCATTT
*
19024037 TTATGGCTTGTAAATTCATACAATGGTCCCTTGAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * * *
19024102 TCGTTTTTTATTTCCCACAATTTTCGAAACTTTTTGCGATTCAAGATTTTTTAAAATTTTTTCGG
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGG
*** *
19024167 AAGGAGTTTTGGCCCCAAACTTGGTAGTTGTGATCCTTGTATTTTTGTTGGCATGCA-TAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * *
19024231 TTTAGCTGAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
19024296 CACTTTAATGGCTACTGGCAGCAAACCTTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTT
585 CACTTTAATGGCTACTGGCAGCAAACC-TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
19024361 CTCGAGGTTTGATGAGGGATAGCGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
19024426 TGTGCGCGTACACCCCC-GGCACCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCG
714 TGTGCGC--ACACCCCCTGGC-CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
** * ** * * * **
19024490 GTGATGCTCTGGTGATGGTGCCCTGATGAAGAAAAATACGGCACCAGCACATGGTCGAGCCCAGC
776 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * ** ** * *
19024555 ATGTGCT-CTTGCAATCCTCGGTCCAGTTTGATCTTCGACTGGGAATGAACTCCATATG
841 ATGTGCTGC-CGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
19024613 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCCACCGATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
19024678 CGGTCAGAGGGGCGAGACGCACAAG-CGGGGATCGATCGGGTCCCACTCTACGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * ** *
19024742 TGCTACCATAACCATCAGTCCAGTCTGATCTTAGACT-GGAATGAACTCCGTATGCCTGAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
19024806 CCGATGAAATGAGCG-GTCGGGCAGGCGGGCACTACACCAGCCAGAGAGATGGGATGCACAAGCC
196 CCGACGAAACGAGCGAG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
*
19024870 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * * * *
19024935 TTATGGCTTGCAAATTCTTACAATAGTCCCTTAAGCCCTCACGTGAAGTTCCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* *
19025000 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCG
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAG-GATTTTTTAAAATTTTTTCG
*
19025064 GAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
19025129 ATTCAGCTAAAAGCTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAAAGTGTCCCCATTTC
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG--AAAAAAGTGTCCCCATTTC
* *
19025194 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* **
19025259 TTCTGGAGGTTTGATGAGGGATAGGGTACCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
19025324 CATGTGCGCACACCCCCATCGGCCCCCCGATCGCCAGAACCCCAATGCCGTCGGTCAGG---T--
712 CATGTGCGCACACCCCC-T-GGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
*
19025384 -----T-CTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACTTGCCCGAGCCCAG
775 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * *
19025443 CATGTGCTACCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCTGTATG
840 CATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
19025502 CTTACACTGGGAATGAAATCCGTATGCCTAAGTAAACCCACAAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * **
19025567 CGGCCAGAGGGGCAGGGATGCGCAAGTCGGGGATTGGTCGAGTCCCCTTCGGCGTGCTGTTGATC
66 CGGCCAGAGGGGC-GGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATC
* * **
19025632 CTACTACCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
19025697 ACCGAC-AAA--A-CGAACGGGCGGGCGGGCACTACGTCGACGAGAGAAACGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
19025758 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * ** * * *
19025823 CTATGGCTTGTAAATTCATACAGTATTCTCTTAAGCCTTCACGTGAAGTTTCATTGCAAGATGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
19025888 TCCTTTTCTATTTTTCACTATTTTTGAAACTTTTTGCGGTTC-GAGATTTTTTAAAATTTTTTCA
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAG-GATTTTTTAAAATTTTTTCG
* * **
19025952 GAAGG-GTTTTGGCCACAAACTTCGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
19026016 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
** *
19026081 ACACTTTGTTGGCTACTGGCAGCAAACGTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
19026146 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * ** *
19026211 TGTGCGCACACCCCCGTCGGCCCCCCCGATCGTCGAAACCATAATGTCGCCGGTCAGGTTCTCCG
714 TGTGCGCACACCCCC-T-GG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** * * *
19026276 ACGATGCTCTGACGATGGTGCCCCGTTGAACAAAAATGTGGCACTAGCACATGCCCGAGCCCAGC
776 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* ** *
19026341 ATTTTTTGCCACAA-CC-C--TC--G---G---TT---C-------G-A-TCCG-AT-
841 ATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
19026373 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAGACGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * * * *
19026438 CGGCCATAGGAGCAGGATGCGCCAGCCGGGGATCGACCAGTTCCTCTTTTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * *
19026503 TACTGCCGCAACCCTCAATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
19026568 CCGACGAAACGAGCGTGCGGGCGGGCCGACACTACGCCGGCCAGAGAGACGGGATACGCTAGCCG
196 CCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * *
19026633 TGGATCGATAGGGTGCTAGGTGGGTTTTGGCACATCTTCATATTTCTACGTGCC-A--CCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
19026695 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC-A-A-GA--
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
19026755 CG-------------AC---TTTTGAAACTTTTTGC-GTTCATGATTTTTTAAAATTTTTTCAGA
391 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGA
* * * *
19026803 AAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT-TCATTTTTGTTGGCATGAAAAAAAAAA
456 AGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGT-ATTTTTGTTGGCATGCACAAAAAAA
* *
19026867 TTCAGCTAAAAACTTGAAGTGTACAACATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
19026931 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCGAATGCTTTTTAA-AGGGT-TGA-TTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
19026993 TTGA-GTTTGATGAGGGATAGGGGG-CAATTATAAGGGCCAAGTACAAGCACCCATCGCACATCA
650 TCGAGGTTTGATGAGGGATAGGGGGCCAA-TATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
19027056 TGTGCGCACACCCCCT-GCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGG-T-T----C-
714 TGTGCGCACACCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
* *
19027113 -T--T-CGATGATGGTGCCCCGACGAAGAAAAATGCGGCATCAGCACATGCCCGAGCCCAGCATG
779 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
** * *
19027174 TGCTGTTGTAACCCTCGGATCTGGTCCAATCTTAGA-TGGGAATGAACTCCGTATG
844 TGCTGCCGCAACCCTCGG-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
19027229 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGA-CGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* **
19027293 CGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGGCCGGGT---CC-CT-C-T-CTG-CG----
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
19027346 TGCTGTCGCAACCCTTGGTCTGGTCTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
19027411 CCGACAAAACGAACGGGCGGGTGGGCGGGCGGGCACTACGTCGGCCAAAGAGACGGGATGCGCAA
196 CCGACGAAACG-A---GCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
19027476 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * *
19027541 TTTTTCTGGCTTGCAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
19027606 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTT
* * *
19027671 CGGAAAGAATTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAAAAAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * * *
19027736 AAATTCAACTAAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCTCCATTTT
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
19027801 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCACATGCCCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * ** * * ** *
19027866 TTCTCAAGGTTTGATGAGGGATACGGGGATATTATATGGGATAAGCACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
19027931 CATGTGCGCACACCCCCCGGCCCCCTGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTCCGA
712 CATGTGCGCACACCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
** *
19027996 TAATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
777 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* ** *** * *
19028061 AGTGCTGCCATAACCCTCGGTCCAATCCGATCTTAGACTGGGAATGAACTCTGCATG
842 TGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
19028118 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
19028183 CGCCCTGAGAGGCGGGA-GGGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
19028247 TGTTGCCGTAACCCTCAGTCCGGTCTGATCTTAGACTTGGAATGAACTCCGTATACCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
19028312 CTGATGAACCGAGCGGGCAGGCGGGCGGGCACTACGCC-GCCAGAGAGAC--G--G-G--A----
196 CCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
19028365 T-G--C-----------------GTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
19028410 GATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACTTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
19028475 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGA
391 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGA
* *
19028540 AGGA-TTCTTGGCCCCAAACTTGGTAGACATGATCCTTGTCTTTTTGTTGGCATGCATAAAAAAA
456 AGGAGTT-TTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
19028604 TTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCTCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
19028669 CGCTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
19028734 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
19028799 GTGCGCACACCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTTCGACG
715 GTGCGCACACCCCCTGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
*
19028864 ATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
779 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * *
19028929 TGCTGCCGTAACCCTCGGTTCAT--TTCGATCTTAGATTGCGAATGAACTCCGTATG
844 TGCTGCCGCAACCCTCGG-TC-TGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* **
19028984 CTTAGACTGGGAATGAGCTCTATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
19029049 CAGTCTGAGGGGCGGGATGCGCAAGACGGAGATCGATCGTGTCCCCCTTTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
19029114 TACTGCTGCAACCCTCGATCTGGTCTAATCTTAGGCTGGGAATGAAC-CTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
19029178 CCGACGAAACGAGCGGGCGGGCAGGCGGACGGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGAGCGGGC--G-GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
19029243 GCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAAATTTCT--ATGTTCCAATGC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG--CCAATGC
*
19029306 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGCGAAGTTTCATGGCAAG
320 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * *
19029371 ACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTTGCTGTTCGGGATTTTTTAAAATTT
385 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTTGCGGTTCAGGATTTTTTAAAATTT
** * *
19029436 TTTCACAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCATGCACA
449 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACA
* * **
19029501 AAACAATTCAGCTAAAAACTCAAAGTGTACATTATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
19029566 TTAAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
19029631 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
19029696 CATCATGTGCGCACACCCCTTCGGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
709 CATCATGTGCGCACACCCC--CTGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
** * * *
19029761 CTCCGGTGATGCTCCGACGATGGTTCCCCGACAAAGAAAAATGCGGCACCAGCACATGCTCGAGC
771 CTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * *
19029826 CCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGAGTGGGAATGAACTTCGTATG
836 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
19029889 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC-AGAACGAGCGTGCAGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA-AACGAGCGTGCGGGCGCTCAG
* ** * * *
19029953 CCAGCCAGAGGGATGGGATGCGCAAGCTGGGGATCG-GCTGGGTCCCCCTCTGCGTGCTACCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGAT
** * *
19030017 CCTATTACCGCAACCCTCGGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
129 CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
*
19030082 AACCGACGAAAC-A---A----GCGGGCGGGCACTATGCCGGCCAGAGAGAC-GGATGCGGCAAG
194 AACCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC-GCAAG
* * *
19030138 CTGTGG-TCGATAGGGT-GTAGGTGGGTTTTAGGCA-ATCTTCATATTTTTGCTGTGCCAATGCC
258 CCGTGGATCGATAGGGTGGTAGGTGGG-TTTAGGCACATCTTCATATTTCTGC-ATGCCAATGCC
* *
19030200 ATTCTTATGGC-TGTAAATTCCATACAGT-GTCCCTTAAAGCCCTT-ACGTGAAGTCTTCAT-GC
321 ATTTTTATGGCTTGTAAATT-CATACAATGGTCCCTT-AAG-CCTTCACGTGAAGT-TTCATGGC
* * *
19030261 AAGACGACT-G-TTTCTTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTCTTAAAA
382 AAGACGACTCGTTTTC-TATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAA
* * * * * **
19030324 TTTTTTCGAAAGGAGTTTT-ACCCTCAAACTTAGAAGACGTGATCCTTGTATTTTT-TTCCCATG
446 TTTTTTCGGAAGGAGTTTTGGCCC-CAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATG
* *
19030387 CA-TAAAAAATTCAGCTAAAAACTCGAAGTGTAGAAGATTTTGTGACCATTTGAAAAAAGTGTCC
510 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
19030451 CCATTTCAGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAAGGG
575 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
19030516 GTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCATTATAAGGGCCAAGTACCAGCACCCAT
640 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
*
19030581 CGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGG
705 CGCACATCATGTGCGCACACCCCCTGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* *
19030646 TTCTTCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGA
769 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * *
19030711 GCCCAGCATGTGCTGCCGTAACCCTCGGTTCAT--TTCGATCTTAGATTGCGAATGAACTCCGTA
834 GCCCAGCATGTGCTGCCGCAACCCTCGG-TC-TGGTCCGATCTTAGACTGGGAATGAACTCCGTA
19030774 TG
897 TG
* **
19030776 CTTAGACTGGGAATGAGCTCTATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * *
19030841 CAGTTAGAGGGGCGGGATGCGCAAGACGGAGATCGATCGTGTCCCCCT-TGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
19030905 TACTGCTGCAACCCTCGATCTGGTCTAATCTTAGGCTGGGAATGAAC-CTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
19030969 CCGACGAAACGAGCGGGCGGGCAGGCGGACGGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGAGCGGGC--G-GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
19031034 GCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGCAAATTTCT--ATGTTCCAATG
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT-CATATTTCTGCATG--CCAATG
19031097 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT-GCAA
319 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * *
19031161 GACGGACTCGTTTTTTATTTTTCATTGA-TTTTGAAAC-TTTTGCTGTTCGGGA-TTTTTAAAAT
384 GAC-GACTCGTTTTCTATTTTTCA-CGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAAT
* * * *
19031223 TTTTTCAGAAGGTGTTTTGGCTCTAAACTTGGTAGACATGAT-CTTGTATTTTTGTTGGCATGCA
447 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCA
* *
19031287 TAAAAAAATTTAGCTAAAAAACTCGAAGTGTACAAGATTTT-TGACCATTTTGAAAAAAAGTGTC
512 CAAAAAAATTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCA-TTTG-AAAAAAGTGTC
*
19031351 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT-AAATCTC-AATGCACTTTAAGGG
574 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
19031414 GGTGTGAGTTCTCGAGGTTTGATGGGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
639 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * *
19031479 TCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGCCAGAACCCCAATGCAGACAGTCAGG
704 TCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
**
19031544 TTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAAATGCGGCACCAGCACATGACCC
769 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG-AAAAATGCGGCACCAGCACATG-CCC
* * * * * * *
19031609 TAGCCCAGTATGTGCTGCGGTAAACCCCCGGTCTAGTCCTGATCTGAGACTCGGGAATGAACTCC
832 GAGCCCAGCATGTGCTGCCG-CAACCCTCGGTCTGGTCC-GATCTTAGACT-GGGAATGAACTCC
*
19031674 ATATG
894 GTATG
* * * * *
19031679 CCTTA-A---GG--TCAAC-CC--A---C---G--AA---ATG-GA-TAGCGTCGCGACGCGCTC
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT-GCG-GGCGCTC
* * * * ** * *
19031722 AG-CGGCCGGGAGGGGCAAGGATTCGCAGGATGGGGATCGATC-GGTCCCCCTTCTACGTGCTGT
63 AGCCGGCC-AGAGGGGC-GGGATGCGCAAGCCGGGGATCGATCGGGTCCCCC-TCTGCGTGCTGC
* * * * *
19031785 CGATCCTGCTGCCGCAACCCTCGAT-TCGATCTGATCTTAGACTAGCAATGAAC-CTGTATGCCT
125 CGATCCTGCTGCCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
19031848 AAGCCAATCGACGAAACGAACGGGCGGGCAGGCGGACGGGCACTACACCGGCCAGAGAGATGGGA
189 AAGCCAACCGACGAAACGAGCGAGCGGGC--G-GG-CGGGCACTACGCCGGCCAGAGAGACGGGA
* * *
19031913 TGCGCAAGCCGTGGATCGATGGGGTGGTAGGTGGGTTTAGACACATCTTCATATTTCTGCGTGCC
250 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* *
19031978 AATGCCATTTTTATGCCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
315 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * * *
19032043 GCAAGACGACTTGTTTTCTATTTTCCATGATTTTTGAAAATTTTTGCGGTTCAGGATTTTTTAAA
380 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAA
* * *
19032108 ATTTTTAT-GGAAGGAGTTTTGGCCCCAAAC----TAGGCGTGATCCTTGTTTTTTTGTTGGCAT
445 ATTTTT-TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCAT
* *
19032168 GCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCAATTGAAAAAAGTGTC
509 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * ** *
19032233 TCCATTTCAGACATTTTAATGGCTACTGGCGGTGAACCTGTAAAATCTCAAAAGCTCTTTAAGGG
574 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
19032298 GGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGTCCAAGTAGCAGCACCCA
639 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* ** * *
19032363 TCACACATCATGTTTGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAGG
704 TCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* * * * * *
19032428 TTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAATAAAAATGTGACACCAGCACATTCCCGA
769 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * * * *
19032493 GCCCAGCTTTTGCCGCCACAACCATCGGTCTGATCCGATCTT-GACTGGGAATGAACTCCGTATG
834 GCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
19032557 C
1 C
19032558 CTAAGCCAAC
Statistics
Matches: 10870, Mismatches: 1214, Indels: 789
0.84 0.09 0.06
Matches are distributed among these distances:
830 55 0.01
831 3 0.00
832 1 0.00
833 1 0.00
835 3 0.00
837 1 0.00
839 1 0.00
840 1 0.00
841 32 0.00
842 1 0.00
843 68 0.01
844 5 0.00
845 69 0.01
846 6 0.00
847 99 0.01
848 7 0.00
849 97 0.01
850 172 0.02
851 2 0.00
852 3 0.00
853 5 0.00
854 4 0.00
855 51 0.00
856 46 0.00
864 2 0.00
865 409 0.04
866 255 0.02
867 78 0.01
868 6 0.00
869 153 0.01
870 117 0.01
871 157 0.01
872 270 0.02
873 445 0.04
874 192 0.02
875 5 0.00
876 7 0.00
877 67 0.01
878 53 0.00
879 5 0.00
880 8 0.00
881 14 0.00
882 71 0.01
883 70 0.01
884 231 0.02
885 311 0.03
886 279 0.03
887 1130 0.10
888 252 0.02
889 526 0.05
890 54 0.00
891 168 0.02
892 160 0.01
893 182 0.02
894 46 0.00
895 13 0.00
896 19 0.00
897 134 0.01
898 556 0.05
899 813 0.07
900 240 0.02
901 183 0.02
902 610 0.06
903 620 0.06
904 11 0.00
905 302 0.03
906 28 0.00
909 2 0.00
914 1 0.00
918 1 0.00
919 94 0.01
920 3 0.00
926 3 0.00
927 24 0.00
930 1 0.00
932 1 0.00
937 2 0.00
938 66 0.01
940 1 0.00
951 1 0.00
953 2 0.00
954 2 0.00
955 1 0.00
956 169 0.02
957 298 0.03
958 5 0.00
959 4 0.00
960 2 0.00
961 1 0.00
962 3 0.00
963 4 0.00
964 194 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
GCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
CTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:19022766 original size:26 final size:26
Alignment explanation
Indices: 19022730--19022782 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19022720 CTCGTTCGAT
* *
19022730 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCATATG
19022756 CTTAGACTGGGAACGAACTCCATATG
1 CTTAGACTGGGAACGAACTCCATATG
19022782 C
1 C
19022783 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCATATG
Found at i:19023704 original size:26 final size:26
Alignment explanation
Indices: 19023668--19023746 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
19023658 CCTATTCCAT
19023668 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19023694 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
19023720 CTTAGAGTGGGAATGAACTCAGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19023746 C
1 C
19023747 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.28, C:0.18, G:0.28, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19025505 original size:26 final size:26
Alignment explanation
Indices: 19025476--19025528 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19025466 CTGGTCCAAT
* * *
19025476 CTTAGACTGGGAATGAACTCTGTATG
1 CTTACACTGGGAATGAAATCCGTATG
19025502 CTTACACTGGGAATGAAATCCGTATG
1 CTTACACTGGGAATGAAATCCGTATG
19025528 C
1 C
19025529 CTAAGTAAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAAATCCGTATG
Found at i:19027241 original size:26 final size:25
Alignment explanation
Indices: 19027204--19027255 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 25
19027194 CTGGTCCAAT
19027204 CTTAGATGGGAATGAACTCCGTATG
1 CTTAGATGGGAATGAACTCCGTATG
19027229 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGA-TGGGAATGAACTCCGTATG
19027255 C
1 C
19027256 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 6 0.23
26 20 0.77
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (25 bp):
CTTAGATGGGAATGAACTCCGTATG
Found at i:19028144 original size:26 final size:26
Alignment explanation
Indices: 19028092--19028144 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19028082 CCAATCCGAT
*
19028092 CTTAGACTGGGAATGAACTCTGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
*
19028118 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
19028144 C
1 C
19028145 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:19029899 original size:26 final size:26
Alignment explanation
Indices: 19029863--19029915 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19029853 CCGGTCCGAT
* *
19029863 CTTAGAGTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19029889 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19029915 C
1 C
19029916 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19035781 original size:26 final size:26
Alignment explanation
Indices: 19035752--19035804 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19035742 CTAATCCGAT
19035752 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19035778 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19035804 C
1 C
19035805 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19036679 original size:26 final size:26
Alignment explanation
Indices: 19036650--19036702 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19036640 CTGATCCGAT
19036650 CTTAGACCGGGAATGAACTCCGTATG
1 CTTAGACCGGGAATGAACTCCGTATG
** *
19036676 CTTAGATTGGGAGTGAACTCCGTATG
1 CTTAGACCGGGAATGAACTCCGTATG
19036702 C
1 C
19036703 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACCGGGAATGAACTCCGTATG
Found at i:19037560 original size:26 final size:26
Alignment explanation
Indices: 19037531--19037583 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19037521 CCGGTCCGAT
19037531 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19037557 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19037583 C
1 C
19037584 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19037761 original size:881 final size:885
Alignment explanation
Indices: 19035503--19040488 Score: 5707
Period size: 898 Copynumber: 5.5 Consensus size: 885
19035493 CAGATACTTT
* ** * * *
19035503 AATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAGGGATAGGGGGATATTATACGAGCC
1 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * *
19035568 AAGTACCAGCACCCATCACACATCATGTGTGCACA-CCCCCCGGCCCCCTGATCACCGGAACCTC
66 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCC
* * * ** *
19035632 AATGCCGCAGGTTAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAACACGAC
131 AATGCCGCCGGTCAGGTTCTCC-GCGA-GCT----CGATGGTGCCCCGACGAAGAAAAATGCGGC
* * * * *
19035697 ACCAGCACATGCCCGAGCCCAGCAAGTGCTGCTGCAACCCTC-GACCTAATCCGATCTTAGACTG
190 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCAGTCC-GATCCGATCTTAGACTG
*
19035761 GGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
254 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* **
19035826 GCGTGCAGGCGCTCAGCCGGCCAG-GGAGGTGGGATGCATAAGCCGGGGATCAGTCGGGT-CCCC
319 GCGTGCGGGCGCTCAGCCGGCCAGAGG-GGTGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCC
* * * * *
19035889 TCTACGTGCTGCTGATTCTGCTGCCACAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAAC
383 TCTACGTGCTGCCGATCCTGCTGCCACAACCCTTG-TCTGGTCTGATCTTAGACTAGGAATGAAC
* * * * *
19035954 TCCGTATGCCTAAGCCTACCAACGTAACGAGCGGACGGGCCGGCGGGCGGGCATTACGCCGGCTA
447 TCCGTATGCCTAAGCCAACCGACG-AA--A-C-GA------GGCGAGCGGGCACTACGCCGGCCA
* *
19036019 GAGAGACGGGATGCGCAAGCCGTGGATCGATTGGGTGGTAGCTGGGTTTAGGCACATCTTCATAT
501 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*
19036084 TTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
566 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * *
19036149 GAAGTTTCATGACAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACTGTTCGA
631 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
*
19036214 GATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCC-AACTTGGTAGACATGATCCTTGTATTC
696 GATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT-
* *
19036277 TTT-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTG
760 TTTGTTGGCAAGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * *
19036341 AAAAAA-AGTCCCCATTTCAGACATTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTGA
825 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
19036401 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
1 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
19036466 AAGTACCAGCACCCATCGCACATCATGTGCACTCA-CCCCCCGGCCCCGCGATCGCCGGAACCCC
66 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCC
*
19036530 AATGCCGCAGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
131 AATGCCGCCGGTCAGGTTCTCC-GCGA-GCT----CGATGGTGCCCCGACGAAGAAAAATGCGGC
* * * * * *
19036595 ACCAGCATATGCCCGAGCCCAGCAAGTGCTGCC-TCAACCATCGGTCTGATCCGATCTTAGACCG
190 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT-AACCCTCAGTCCGATCCGATCTTAGACTG
* * *
19036659 GGAATGAACTCCGTATGCTTAGATTGGGAGTGAACTCCGTATGCCTAAGTCAACCCACAAAACGA
254 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * *
19036724 GCGTGCAGGCGCTCAACTGGCCAGAAGGGGTGGGATGCGTAAGCCGGGGATCGGTCGGGTCCCCC
319 GCGTGCGGGCGCTCAGCCGGCCAG-AGGGGTGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCC
* * * ** * * *
19036789 TCTGCGTGCTGTCGATCCTGCTACTGCAACCTTTGGTCTGATCTGATCTTAGACTGGGAATGAAC
383 TCTACGTGCTGCCGATCCTGCTGCCACAACCCTT-GTCTGGTCTGATCTTAGACTAGGAATGAAC
* * * * *
19036854 TCCGTATGCCTAAGCCAACTGACGAAACGA-GCGAGCGGGCACTATGCCAGCAAGAGAAACGGGA
447 TCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGA
19036918 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
512 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
19036983 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
577 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
19037048 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
642 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
*
19037113 ATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTCTTTTTGTTGGCAAG
707 ATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAG
* *
19037178 CACAAAAACATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
772 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
19037243 CCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCA
837 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * * * *
19037292 AATGCTCTTTAAGCGGGTGTTAGTTCTCGAGGTTTGATGAGGGACAGGTGG-CAATA-AATGTGC
1 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA-GGGC
* * *
19037355 CAAGTACCAGCACCCATCGCACATGATGTGCGCACACCCCCCCGGCCCCCCCGATTGTCGGAACC
65 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCCCGATCGCCGGAACC
* **
19037420 CCAATTCTACCGGTCAGGTTCT-C-CG-G-T-GATGGTGCCCCGACGAAGAAAAATGCGGCACCA
129 CCAATGCCGCCGGTCAGGTTCTCCGCGAGCTCGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * *
19037480 GCACATGCCTGAGCCCAGCATGTGCTGCCGTAACTCTCGGTCCGGTCCGATCTTAGACTGGGAAT
194 GCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCAGTCCGATCCGATCTTAGACTGGGAAT
* * * *
19037545 GAACTCCGTATGCTTAGGCTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCCTA
259 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * ** * *
19037610 CGGGCGCTGAGCCGGCTAGAGGGGCAGGATACGCAAGCCGGGGATCGGTCAGGGTCCCCCTCTAC
324 CGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCAGTC-GGGTCCCCCTCTAC
* **
19037675 GTGCTGCCGATCCTGCTGTCGGAACCCTTTGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGT
388 GTGCTGCCGATCCTGCTGCCACAACCC-TTGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGT
*
19037740 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACGTCGGCCAGAGAG
452 ATGCCTAAGCCAACCGACGAAACGA---GGC--G-A-----GCGGGCACTACGCCGGCCAGAGAG
* * *
19037805 ACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGATGGGTTTAGGCACATCTTAATATTTCTG
506 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
19037870 CATGCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
571 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * * *
19037935 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCTGTTCGAGATTT
636 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTT
* * * *
19038000 TTTAAAA-TTTTTCGAAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATTCTTGTATTTTTGTT
701 TTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * * *
19038064 GCCAAGCACAAAAAAATTCAGCTAAAAACTCGAAGTTTACAAGATTTTTTGACCATTCGAAAAAA
766 GGCAAGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
*
19038129 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCGGCAAACCTGTAAAATCTCA
831 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
19038184 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCC
1 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
19038249 AAGTACCA-CACCCATCACACATCATGTGCGCACACCCCCCTGGCCCCCCGATCACCGGAACCCC
66 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCC
* * * *
19038313 AATGCCGCCGGTCAGGTTCTTCGGTGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGTGGC
131 AATGCCGCCGGTCAGGTTC-TCCGCGA-GCT----CGATGGTGCCCCGACGAAGAAAAATGCGGC
** * *
19038378 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCAATCCGATCGGATCTTAGACTGG
190 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCAGTCCGATCCGATCTTAGACTGG
* * *
19038443 GAATGAACT-CGTATGCTTAGACTGGGAATCAACACCGTATGCCTAAGTCAACCCACGAAATGAG
255 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* ** * *
19038507 CGTGCGGGCGCTCAGCTGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCAACCGGGTCCCCGTT
320 CGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCCTC
* * * * * * * * * *
19038572 TGCATGTTGTCGATCCTGCTG-C-CAA--C-TG-AT-G---AAAC-GAG-C-GGGCA-G-A---C
385 TACGTGCTGCCGATCCTGCTGCCACAACCCTTGTCTGGTCTGATCTTAGACTAGGAATGAACTCC
** *** * * *
19038619 G---G---GGGGGTA--GAC---ACTATGC---C-GGC-C-A-----G--AGAGACG-G--GATG
450 GTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGGGCACTACGCCGGCCAGAGA-GACGGGATG
* *
19038657 CGCAAGCCGTGGATTGATAGGGTGGTAGTTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
514 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
19038722 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
579 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
19038787 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAT
644 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAT
*
19038852 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTCTTTTTGTTGGCAAGCA
709 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCA
* *
19038917 CAAAAACATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
774 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * * *
19038982 ATTTCAAACACTTTAATGGCGACTGGCAACAAACCTATAAAATCTCA
839 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
19039029 AATGCTCTTTCATGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
1 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * *
19039094 AAGTACAAGCACCCATCGCACATAATGTGTGCACACCCCCCCGACCCCACCGATCGCTGGAACCC
66 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC-CCGATCGCCGGAACCC
* * *
19039159 CAATGCCGCCAGTCAGGTTCTCCGGACAATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTG
130 CAATGCCGCCGGTCAGGTTCTCC-G-CGA-GCT-C---GATGGTGCCCCGACGAAGAAAAATGCG
*
19039224 GCACCAGCACATGCCCGAACCCAGCATGTGCTGCC-TCAACCCTCAGTCCTG-TCCGATCTTAGA
188 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT-AACCCTCAGTCC-GATCCGATCTTAGA
* * * * *
19039287 CTGGGAATGAACACCGTATGCTTAGATTGCGAATGAACTCCTTATGCCTAAGTCAAACCACGAAA
251 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * * *
19039352 CGAGCGTACGGGCGCTCAGCCAGACAGAGGGCTGAGATGCACAAGTCGGGGATCAGTCGGCGTCC
316 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCAGTCGG-GT-C
* * * * *** *
19039417 CCCCTCTGCATGCTGTCCAATCCTGCTGCCTACAAGTTCAGCGATCGTGGTCTGATCCTAAAGAC
379 CCCCTCTACGTGCTG-CCGATCCTGCTGCC-ACAA--CCCTTG-TC-TGGTCTGAT-CT-TAGAC
* * * *
19039482 TAGGAAATGAACTCCCGTATGCCCAAACAAAACCGAACGAAAACGAGCAAGGCGGCGGCGGGCCG
436 TAGG-AATGAACT-CCGTATGCCTAAGC-CAACCG-ACG-AAAC--G--A------GGCGAG-C-
19039547 GGCGGCACTACGCCGGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGGGTAGGT
484 -G-GGCACTACGCC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT--GGTAGGT
* *
19039612 GGGTTTGAGGCAACATCTTCATATTTCTGCGTGCCCAATTCCATTTTATATGGCTTGTAAATTCA
544 GGGTTT-AGGC-ACATCTTCATATTTCTGCATG-CCAATGCCATTTT-TATGGCTTGTAAATTCA
19039677 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAAGACGACTCGTTTTCTATTTTTCC
605 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC-AAGACGACTCGTTTTCTATTTTT-C
* * * * *
19039742 A-GATTTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAACTTTTTTCGAAAGGAGTTTTGG-CC
668 ATGA-TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCC
* * *
19039805 CAAAATTGGTAGATGTGATCTCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA-CTAAAAACT
732 CAAACTTGGTAGACGTGATC-CTTGTATTTTTGTTGGCAAGCACAAAAAAATTCAGCTAAAAACT
*
19039869 CGAAGTGTACAAGATTTTGTGATCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
796 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
19039933 CTGGCAGCAAACCTGTAAAATCTCA
861 CTGGCAGCAAACCTGTAAAATCTCA
* *
19039958 AACGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCAAATATAAGGGAT
1 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT----G---A-GGG-----AT-A--G--
** *
19040023 AAGGGGTGAATATAAGGGCCAAGTACCAGCACCCATCGCACGTCATGTGCGCACAACCCCCTCCC
48 --GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-A--CCC-CCC
* * * ** *
19040088 CGGCCCCCAGATCGCCGGAACCCCAACGCCTCCAATCAAGTTCTCCGACGATGCTCCGGCGATGG
107 CGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGA-GCT----CGATGG
* *
19040153 TGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAG-CCAGCATGTGCTACCGTAACCCT
166 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCT
*
19040217 CAGTCC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCCGTA
231 CAGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT-C---
*
19040281 TGCTTAGACTAGGAATGAACTCCGTATGCCAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAG
291 --C---G--T----ATG----CC---T---AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
19040346 CCGGCCAGAGGGGTGGGATGCACAGGCCGGGGATC-GATCGGGT-CCCCTCTGCATGCTACCGAT
335 CCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCAG-TCGGGTCCCCCTCTACGTGCTGCCGAT
* * * * * *
19040409 CCTGCTG-TAGCAACTCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
399 CCTGCTGCCA-CAACCCT-TGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGC
* *
19040473 CAACCCATGAAACGAG
462 CAACCGACGAAACGAG
19040489 CGTACGGGCG
Statistics
Matches: 3523, Mismatches: 369, Indels: 340
0.83 0.09 0.08
Matches are distributed among these distances:
844 189 0.05
845 231 0.07
846 41 0.01
847 35 0.01
848 100 0.03
849 95 0.03
850 2 0.00
851 13 0.00
852 10 0.00
853 2 0.00
854 1 0.00
855 6 0.00
856 1 0.00
860 1 0.00
863 1 0.00
864 1 0.00
867 3 0.00
868 1 0.00
870 5 0.00
871 1 0.00
872 2 0.00
873 4 0.00
874 1 0.00
875 3 0.00
878 1 0.00
879 2 0.00
880 27 0.01
881 255 0.07
882 4 0.00
884 1 0.00
885 3 0.00
886 5 0.00
887 3 0.00
888 222 0.06
889 35 0.01
890 128 0.04
891 138 0.04
892 278 0.08
893 232 0.07
894 4 0.00
895 2 0.00
896 3 0.00
897 3 0.00
898 313 0.09
899 35 0.01
900 105 0.03
901 94 0.03
902 93 0.03
903 2 0.00
907 1 0.00
911 3 0.00
912 1 0.00
913 1 0.00
919 1 0.00
920 1 0.00
921 5 0.00
923 26 0.01
925 12 0.00
926 4 0.00
927 20 0.01
928 12 0.00
929 146 0.04
930 81 0.02
931 85 0.02
933 1 0.00
936 1 0.00
937 3 0.00
942 2 0.00
943 1 0.00
945 1 0.00
949 46 0.01
950 75 0.02
951 55 0.02
952 36 0.01
953 9 0.00
954 1 0.00
956 2 0.00
958 1 0.00
960 4 0.00
961 3 0.00
962 4 0.00
963 11 0.00
964 8 0.00
965 10 0.00
966 2 0.00
967 8 0.00
968 2 0.00
969 4 0.00
970 3 0.00
971 11 0.00
972 15 0.00
974 3 0.00
975 65 0.02
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.24
Consensus pattern (885 bp):
AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCC
AATGCCGCCGGTCAGGTTCTCCGCGAGCTCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
ACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGA
ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
GGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCCTCTACGTG
CTGCCGATCCTGCTGCCACAACCCTTGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGC
CTAAGCCAACCGACGAAACGAGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTG
GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
Found at i:19039320 original size:26 final size:26
Alignment explanation
Indices: 19039281--19039333 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19039271 CCTGTCCGAT
*
19039281 CTTAGACTGGGAATGAACACCGTATG
1 CTTAGACTGCGAATGAACACCGTATG
* * *
19039307 CTTAGATTGCGAATGAACTCCTTATG
1 CTTAGACTGCGAATGAACACCGTATG
19039333 C
1 C
19039334 CTAAGTCAAA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACACCGTATG
Found at i:19040022 original size:20 final size:20
Alignment explanation
Indices: 19039997--19040040 Score: 70
Period size: 20 Copynumber: 2.2 Consensus size: 20
19039987 AGGTTTGATG
19039997 AGGGATAAGGGGCAAATATA
1 AGGGATAAGGGGCAAATATA
**
19040017 AGGGATAAGGGGTGAATATA
1 AGGGATAAGGGGCAAATATA
19040037 AGGG
1 AGGG
19040041 CCAAGTACCA
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
20 22 1.00
ACGTcount: A:0.41, C:0.02, G:0.41, T:0.16
Consensus pattern (20 bp):
AGGGATAAGGGGCAAATATA
Found at i:19040260 original size:26 final size:26
Alignment explanation
Indices: 19040231--19040309 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
19040221 CCAGTCCGAT
19040231 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19040257 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19040283 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19040309 C
1 C
19040310 CAAGTCAACC
Statistics
Matches: 50, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.28, C:0.22, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19040643 original size:158 final size:158
Alignment explanation
Indices: 19040283--19040648 Score: 490
Period size: 158 Copynumber: 2.3 Consensus size: 158
19040273 ACTCCGTATG
* *
19040283 CTTAGACTAGGAATGAACTCCGTATGCC-AAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAGC
*
19040347 CGGCCAGAGGGGTGGGATGCACAGGCCGGGGATCGATCGGGTCCCCTCTGCATGCTACCGATCCT
66 CGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCTCTGCATGCTACCGATCCT
* * * *
19040412 GCTGTAGCAACTCTCGGTCTGGTCCGAT
131 ACTATAGCAACTCTCAGTCCGGTCCGAT
* *
19040440 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAGC
* * **
19040505 TGGCCAGAGGGGTGGGATGCACAAGCCGGGGATC-AGCTGGGTCCCCCTCTGCATGCTGTCGATC
66 CGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGATC-GGGT-CCCCTCTGCATGCTACCGATC
* *
19040569 CTACTATCGTAAC-CTTCAGTCCGGTCC-AGT
129 CTACTATAGCAACTC-TCAGTCCGGTCCGA-T
* * * *
19040599 CTTGGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGA-GAAACGAGCG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
19040649 GGCAGACAGG
Statistics
Matches: 185, Mismatches: 19, Indels: 9
0.87 0.09 0.04
Matches are distributed among these distances:
157 29 0.16
158 81 0.44
159 75 0.41
ACGTcount: A:0.22, C:0.29, G:0.30, T:0.19
Consensus pattern (158 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAGC
CGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCTCTGCATGCTACCGATCCT
ACTATAGCAACTCTCAGTCCGGTCCGAT
Found at i:19041325 original size:26 final size:26
Alignment explanation
Indices: 19041291--19041343 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19041281 GTTCGTCGAT
* *
19041291 CTTATACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19041317 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19041343 C
1 C
19041344 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19042198 original size:26 final size:26
Alignment explanation
Indices: 19042169--19042221 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19042159 CCGGTCTGAT
*
19042169 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19042195 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19042221 C
1 C
19042222 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19043048 original size:20 final size:20
Alignment explanation
Indices: 19043025--19043063 Score: 69
Period size: 20 Copynumber: 1.9 Consensus size: 20
19043015 GCCCGAGCCC
19043025 AGCATGTGCTGCCGTAACCT
1 AGCATGTGCTGCCGTAACCT
*
19043045 AGCATGTGCTGCTGTAACC
1 AGCATGTGCTGCCGTAACC
19043064 CTAGGTCTGA
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
20 18 1.00
ACGTcount: A:0.21, C:0.28, G:0.26, T:0.26
Consensus pattern (20 bp):
AGCATGTGCTGCCGTAACCT
Found at i:19043350 original size:885 final size:882
Alignment explanation
Indices: 19040440--19044091 Score: 4323
Period size: 885 Copynumber: 4.1 Consensus size: 882
19040430 CTGGTCCGAT
* *
19040440 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * * *
19040505 TGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCAGCTGGGTCCCCCTCTGCATGCTGTCGATCC
66 CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATCATC-GAGTCCCCCTCTACATACTATCGATCC
* * * * * *
19040570 TACTATCGTAACCTTCAGTCCGGTC-CAGTCTTGGACTGGGAATGAACTCTGTATGCCTAAGCCA
130 TACTATCGCAACCCTCAGTCTGGTCTGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * **
19040634 ACCGA-GAAACGAGCGGGCAGACAGGCGGGCGGGCACTACGTCGGCCAGAGAGATGGGATTTGCA
194 ACCGACGAAACGAGCGGGCAG-CGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
* * *
19040698 AGCCGTGGATCGATAGGGTGGTAGGTTGGTTTCGGCACATCTTCATATTTCTACATGCCAATGCC
258 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
19040763 ATTTTTATGGCCTGTAAATTAATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGA
323 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* ** * **
19040828 CGACTCGTTTTCTATTTTTCACAGTTTTCAAAACTTTTTGCTATTCGAGATTTTTTAAAATTTTT
388 CGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * *
19040893 TCGGAAGGAGTTTTGTCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTT-TTGGCACGTACAAA
453 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
19040956 AAAATTAAGCTCTAAAAAACTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAAAGTGTCCCTA
518 AAAATTAAG--CT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
19041021 TTTAAGACACTTTAACGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTGAA-GGGGTG
580 TTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
*
19041085 TGATTTCTTCGAGGTTTGATGA-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCCATC
645 TGAGTTC-TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCCATC
19041149 GCACATCATGAGCGCACA---CC-G---CCCGATCGTCGGAAACCTCAATGCGTCGGTCAGG-TC
708 GCACATCATGAGCGCACACCCCCTGCCCCCCGATCGTCGG-AACCTCAATGCGTCGGTCAGGTTC
*
19041206 TCCGGCGATGGTATCCCGACGAAG-AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
772 TCCGGCGATGGT-GCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
19041270 --CGTAAACCT-CTGTTCGTCGATCTTATACTGGGAATGAACTTCGTATG
836 GCCGTAAACCTACTG-TC-T-GATCTTACACTGGGAATGAACTCCGTATG
* *
19041317 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGTGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
19041382 CAACCAGAGGGGCGGGATGCACAAGCCGGGGATCAGTCGGGTCCCCCTCTACGTACTATCGATCT
66 CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATCA-TCGAGTCCCCCTCTACATACTATCGATCC
* * * * * **
19041447 TGCTGTCACAACCCTCGGTCTTGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGAAA
130 TACTATCGCAACCCTCAGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
19041511 ACCGACGAAACGA----GC-G-GGG-GGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
194 ACCGACGAAACGAGCGGGCAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
** * **
19041569 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATGA-TTCTGTGTTCTGATGCC
259 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT-ATTTCTGCATGCCAATGCC
* *
19041633 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCCTGGCAAGA
323 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
19041698 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGCTCGAGATTTTTTAAAATTTTT
388 CGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * *
19041763 TCGGAAGCAGTTTTGGTCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
453 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
19041828 AAAAGTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTT-AAAAAAGTGTCCCCATTT
518 AAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * * *
19041892 AAGATACTTTAATGGCGACTGGAAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGAGT-TGA
583 AAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * *
19041956 GATCCCGAGGTTTGACGAGGGATACGGGGCCAATATAAGGGCCAA-TACCAGCACCCATCACACA
648 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
*
19042020 TCATGAGCGCACACCCCCTGCCCCCCGATCGTCGGAACCTCAATGCCGTCGATCAGGTTCTCCGG
713 TCATGAGCGCACACCCCCTGCCCCCCGATCGTCGGAACCTCAATG-CGTCGGTCAGGTTCTCCGG
* *
19042085 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAG-ATGTGCTGCCGT
777 CGATGGTG-CCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT
* * *
19042149 AAACCTTTATCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
841 AAACC--TA--CTGTCTGATCTTACACTGGGAATGAACTCCGTATG
*
19042195 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
*** * * ** * * * *
19042260 CATAAAGAGGGGTGGGATGCGCAAGCTAGGGATCGGTCAAGTCCCCCTTTACGTACTATCGATCC
66 CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-ATCGAGTCCCCCTCTACATACTATCGATCC
* ** *
19042325 TACTACCGCAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
130 TACTATCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
19042390 CTGAAGAAACGAGTGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACAGGATGCACAA
195 CCGACGAAACGAGCGGGC-AGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
* *
19042455 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCCCTTCTTCATATTTCTGCATGCCAATGCCA
259 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * *
19042520 TTTTTAGGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGAAAGAC
324 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
19042585 GACTCGTTTTTTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTGTTAAAATTTTTT
389 GACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
* * ** * *
19042650 -TGAAGAAGTTTTCACCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCAAAAAA
454 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * * * *
19042714 AAATTAAGCTAAAAACTCGAAGTGTATAGGATTCTATGACCATTTGAAAAGAGTGTCCCCATTTC
519 AAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTA
19042779 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
584 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
19042844 TTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
649 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
19042909 CATGTGCGCACACCCCCTGGCCCCCCCGATCGCCAGAACCCCAGTGCTGCCGGTCAGGTTCTCCG
714 CATGAGCGCACACCCCCT-G-CCCCCCGATCGTCGGAACCTCAATGC-GTCGGTCAGGTTCTCCG
* *
19042974 GCGATGGTGCCTCGGCGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
776 GCGATGGTGCC-CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * * **
19043039 T-AACCTAGCATGTGCTGCTGTAACCCTAGGTCTG-A-TCCG-AT-
840 TAAACCTA-C-TGT-CTGATCTTACACTGGGAATGAACTCCGTATG
* *
19043080 CTTAGACTGGGAATGAACTCCGTAAGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * *
19043145 CGGCCAGAGGGGCGAGATGCTTAAGACGGGGATCGATCGAGCCCCCCTCTACATGCTATCGATCC
66 CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-ATCGAGTCCCCCTCTACATACTATCGATCC
** * * *
19043210 TGTTGTCGCAACCCTCAGTTTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
130 TACTATCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
19043275 CCGACGAAACGAGCGGGCAAGTGGGTGGGTGGGTACTACGCCAGCCAGAGAGACGGGATGCGCAA
195 CCGACGAAACGAGCGGGC-AGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
* * *
19043340 GCCATGGATCGATAGGTTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTGCATGCCAATGCCA
259 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
19043405 TTTGTATGGCTTGTAAATTCATACAATGGTCCCCTTAAGCCTTCACACGTGAAAAGTTTTCATGG
324 TTTTTATGGCTTGTAAATTCATACAATGGT-CCCTTAAGCCTT--CACGTG--AAG-TTTCATGG
* *
19043470 CAAGACGGACTCGTTTTTTATTATTT--CAATGATTTTGAAAACTTTTTGCGGTTCTG-GATTTT
383 CAAGAC-GACTCGTTTTCTATT-TTTCACAAT--TTTTG-AAACTTTTTACGGTTC-GAGATTTT
* *
19043532 TCAAAAAATTTTTTC-CAAGGAGTTTTGG-CCCAAACTTGGTAGAACGTTGATCCTTGTAATTTT
442 T--TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG-ACG-TGATCCTTGT-ATTTT
* *
19043595 CGTTGGCAATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACCAAGATTTTTGTGA-CATTT
502 TGTTGGC-ATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTA-CAAGA-TTTTGTGACCA-TT
* *
19043659 TGAAAAAAAGTGTCTCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
563 TG-AAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
* * * * * *
19043724 ATGGTCCTTAACGGGGTGTGGAGTTTTCAAGGTTTGATGGGGGATAGGGGGCCAATAT-AGGG-C
627 ATGCTCTTTAAGGGGGTGT-GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * **
19043787 -AGTA-CAGCA-CCATACGCACATTCATGTGCG--CACCCCCGGGCCCGCG-TCACCGCGAACC-
691 AAGTACCAGCACCCAT-CGCACA-TCATGAGCGCACACCCCCTGCCCCCCGATCGTCG-GAACCT
* * **
19043845 CAATGCTGTC-GTCCAGGTTCTCAGAGCGATGAT---CGACCGAAG-AAAATGTGGCA-CAGCAC
753 CAATGC-GTCGGT-CAGGTTCTCCG-GCGATGGTGCCCGA-CGAAGAAAAATACGGCACCAGCAC
* * * * * *
19043904 ATG--CGAGCCCAGAGCATCTGCTACCGCAACCCT-CGGTCCAATCCGATCTTAGACTGGGAATG
814 ATGCCCGAGCCC--AGCATGTGCTGCCGTAAACCTACTGT-C--T--GATCTTACACTGGGAATG
19043966 AACTCCGTATG
872 AACTCCGTATG
* * * *
19043977 CTTAGACTGGGAATCAACTCTGTATGCCTAAGTCAACCTACGAAACGAGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
19044042 C-GACCAAAAGGGCAGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCT
66 CAG-CCAGAGGGGCGGGATGCACAAGCCGGGGATC-ATCGAGTCCCCCTCT
19044092 GCATGCTGCC
Statistics
Matches: 2388, Mismatches: 297, Indels: 160
0.84 0.10 0.06
Matches are distributed among these distances:
866 23 0.01
867 20 0.01
868 96 0.04
869 37 0.02
870 251 0.11
871 7 0.00
872 29 0.01
873 23 0.01
874 33 0.01
875 30 0.01
876 8 0.00
877 167 0.07
878 215 0.09
879 1 0.00
880 2 0.00
881 2 0.00
882 2 0.00
884 1 0.00
885 404 0.17
886 300 0.13
887 47 0.02
888 46 0.02
889 26 0.01
890 90 0.04
891 51 0.02
892 31 0.01
893 23 0.01
894 24 0.01
895 41 0.02
896 42 0.02
897 106 0.04
898 22 0.01
899 45 0.02
900 18 0.01
901 11 0.00
902 80 0.03
903 34 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (882 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATCATCGAGTCCCCCTCTACATACTATCGATCCT
ACTATCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACGAGCGGGCAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCG
GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
ATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGAGCGCACACCCCCTGCCCCCCGATCGTCGGAACCTCAATGCGTCGGTCAGGTTCTCCGGCGAT
GGTGCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAACC
TACTGTCTGATCTTACACTGGGAATGAACTCCGTATG
Found at i:19043980 original size:26 final size:26
Alignment explanation
Indices: 19043951--19044003 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19043941 CCAATCCGAT
*
19043951 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
19043977 CTTAGACTGGGAATCAACTCTGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
19044003 C
1 C
19044004 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:19047789 original size:26 final size:26
Alignment explanation
Indices: 19047753--19047802 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
19047743 TGATCTGATC
19047753 TTAGACTGGGAATGAACTCCGTATTT
1 TTAGACTGGGAATGAACTCCGTATTT
*
19047779 TTAGATTGGGAATGAACTCCGTAT
1 TTAGACTGGGAATGAACTCCGTAT
19047803 GCCTAAGTCA
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.14, G:0.24, T:0.34
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATTT
Found at i:19050427 original size:25 final size:26
Alignment explanation
Indices: 19050393--19050444 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19050383 CCTATTCCAT
* *
19050393 CTTAGACT-GGAATGCACTCCGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
19050418 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
19050444 C
1 C
19050445 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 8 0.33
26 16 0.67
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCAGTATG
Found at i:19052209 original size:26 final size:26
Alignment explanation
Indices: 19052173--19052225 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19052163 CTGGTCCAAT
* *
19052173 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAAATCCGTATG
19052199 CTTACACTGGGAATGAAATCCGTATG
1 CTTACACTGGGAATGAAATCCGTATG
19052225 C
1 C
19052226 CTAAGTAAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAAATCCGTATG
Found at i:19053690 original size:879 final size:876
Alignment explanation
Indices: 19044117--19057483 Score: 14495
Period size: 886 Copynumber: 15.1 Consensus size: 876
19044107 TGTTGCCGTA
* * * * *
19044117 ACCCCACCGGCCCCCCGGTCG-CTGGAACACCAATGCCGTCGGTCAGGTTCTCTGATGATGCTCC
1 ACCCC-CCGGCCCCCCGATCGTC-GAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTC
* * * * * * *
19044181 GATGATGGTACCCCGGTGAAGAAAAATACGGCACCAACACATGCCCGAGGCTAGCATGTGCTGTC
64 GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC
** * * * *
19044246 GCAACCCTCAGTCTGGTGCGATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGTCAACCCACAA
129 GCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * *
19044311 AATGAGCATACGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCATTG-TGGGGATTGGTCGGGT
194 AATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA-AGCCGGGGATCGGTCGGGT
* * * * * * *
19044375 CCCCCTCTGCGTGCTGCCAATCCTGCTGCCGTAA-CCCTCGATCCGGTCTGATCTTACATTGGGA
258 CCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCT-GGTCCGGTCTCATCTTAGACTGGGA
* *
19044439 ATGAACTCCGTATGCCTAAGCCAACCGACAAAACGAGC-GAGC---CGG-CGGGCGGGCACGACG
322 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAG-GCGGGCGGACGGGCGGGCACTACG
** * *
19044499 CCAACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTACGCACATC
386 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
*
19044564 TTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
451 TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * *
19044629 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTCTTTTTCACAATTTTTGAAACTTTTTAC
516 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC
* * * * *
19044694 GGTTCAAGATTTTTAAAAATTTTTT-GAGATGGACTTTTGGCCCCAAACTTGGTAGATGTGATCC
581 GGTTCGAGATTTTTTAAAATTTTTTCG-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* *
19044758 TTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGA
645 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* ** *
19044823 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTACTGATAGCAAGCCTGTAAAATC
710 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
*
19044888 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
775 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
*
19044953 GCCAAGTACCAGCACCCATTGCACATCATGTGCGCATC
840 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-C
* * ** * *
19044991 ACCCCCCGG---CCCGATCGTC-AAACCCTAATGCCGTACGGT-AGGTTCTCTGGCGATACTCCG
1 ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGT-CGGTCAGGTTCTCCGATGATGCTTCG
* * * * * * **
19045051 ATGATGGTGCCCCGGTAAAGAAAAATGTGGCACCAGCAC-TG-GCGACGCCCGGCATGTGCTAAC
65 ACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGA-GCCCAGCATGTGCTGTC
* * * * * * * * ** **
19045114 G-TA-CCATGGTCCGATCCGATCTTAGACTGCGAATGAACTTCATACG-TTAGACGGGAA-GGAC
129 GCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA-A-GTCAACCCAC
* * * * * *
19045175 TGTATTGCTAAGTCAGCTCTATGCAAGAGCGACGGGTCAAGCCGACCAGAAGCGTGGGATGCGCA
192 -G-A-----AA-TGAG--C-ATGC--G-G-G-C-GCTC-AGCCGGCCAGAGGGGCGGGATGCGCA
*** * * * * * *
19045240 AGCCGCAGGG-TCAACCGAGTCCCCCGT-TGCGTGCT-ACGGATCTTGCCTACCGCCA-CCCTCG
239 AGCCG--GGGATCGGTCGGGTCCCCC-TCTGCGTGCTGTC-GATCCTG-CTGCCGCAACCCCTGG
* * * ** * *
19045301 TCTGATCTGATCTTAG-CTCGGGAAATGAACT-CGTATTTGCCTAAGCTTTACTGAC--AATGAG
299 TCCGGTCTCATCTTAGACT-GGG-AATGAACTCCGTA--TGCCTAAGC-CAACCGACGAAACGAG
*
19045362 CAGGC-GGC-G--GGG-GGGCACTAACGCTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCG
359 CAGGCGGGCGGACGGGCGGGCACT-ACGC-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* *
19045422 ATAGGGTGGTATGTTGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
422 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* * * *
19045487 TATAAATTCATACAATGGTCCCTTAAGCTTTCATGTGAAGTTTCATGGCAAGACGACTCGCTTTC
487 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * * * * *
19045552 TATTTTTCATGATTTTTGAAAGTTTTTACGGTTCGGGATTTTCTCAAATTTTTTTGGAAGGAATT
552 TATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTT
* * *
19045617 TTGGCACCAATCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGGTA
617 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
19045681 AAAACTTGAAGAGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
682 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * * * *
19045746 TGGCTACTGGCAGCAAACTTGTAAAATTTCAAACGCTCTTTAAGGAGGTGTGAGTTCTCAAGGTT
747 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* ** *
19045811 TGATGAGGGATAGGGGGCCAATATATGGGCCAAGTATAAGCACCTATCGCACATCATGTGCGCAC
812 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* ** * * *** * *
19045876 ACTCCCCGGCCCCCCGATCACCGGAACCCTAATGCCGTCGGTCAGGTTCAATGGTGATGCTCCGA
1 ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTCGA
* * * *
19045941 CGATGGTGCCCC-AGCGAAGAAAAATGCGGTACCAGCACATGCCCGAGCCCAGCATGTGCTATTG
66 CGATGGTGCCCCGA-TGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCG
** *
19046005 CAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCCGTATGCCTTAAGTC-ACCCACG
130 CAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACT-CCGTATGCC-TAAGTCAACCCACG
* * * * * *
19046069 AAACG-GCATGCGGGTGTTCAGTACC-GCCAGAGGGGGAGGGATGCGCAAGCCGTGGATCGATC-
193 AAATGAGCATGCGGGCGCTCAG--CCGGCCAGA-GGGGCGGGATGCGCAAGCCGGGGATCGGTCG
* * * * * *
19046131 GGT-CCCCTTTGCGTGCTG-C-ATCCTGCTACTTCTG-AACCCTTCGT-TGGT-TAAAATTCTTG
255 GGTCCCCCTCTGCGTGCTGTCGATCCTGCTGC--C-GCAACCCCTGGTCCGGTCT--CA-TCTT-
* * * *
19046190 GGACT-GGAATGAACTCCGTATGCATTAAG-C-ATCGACG-AAC--G-A-GC--G-GG-CGGG-T
313 AGACTGGGAATGAACTCCGTATGC-CTAAGCCAACCGACGAAACGAGCAGGCGGGCGGACGGGCG
* * * * * * *
19046242 AGCACTATG--AG-CAGAGAGACGAG-TGTGCTAG-CGTGGATCGAT-GGTTGGTAGGTGGGTTT
377 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* *
19046301 AGGTACATCTTCATAGTTTCTCGCGTGCC-AT--CATTTTTATGGCTTGT-AATTCATAC-ATGC
442 AGGCACATCTTCATA-TTTCT-GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG-
* *
19046361 GTCCATTAAGCCTTC-CGTGAAGTTTTCATGGCAGGCACG-CTCAGTTTTTCTATTTTTTCACGA
504 GTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAG-ACGACTC-G-TTTTCTA-TTTTTCACGA
** * * *
19046424 TTTTTTTAACTTTTTGCGGTTCAAGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGTCCCCAAAC
564 TTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
19046489 ATGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCAAAGT
629 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
19046554 GTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
694 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * * * *
19046619 GCAAACTTGTAAAATCTCAAATGCACTTTAGGGGGGTGTGAGTTCTCAAGGTTTGATGAGGAATA
759 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
19046684 GGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTGCGTGCAC
824 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC--GCAC
* * * * *
19046739 -CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGG
1 ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTCGA
** * * * * *
19046803 CGATGGTGCCCCGATGAAGAAAAATATGGCACAAGTACATGTCCGAGCCCAGCATGTGCTGGCAC
66 CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGC
** *
19046868 AACCCTTGGTCCAATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAA
131 AACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* ** * * * * * *
19046933 TGTGTGTACGGGCGCTCAACCGGCCAGAGGGGAGGGATGCGGCAAGCAGAGGAT--GCCGGGT--
196 TGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC-GCAAGCCGGGGATCGGTCGGGTCC
* * * * * * *
19046994 --CTCTGTGTGCT-T-GCCTCCTGCTTGCCACAACCCTTGGTTCGTTCTGATCTTAGACTGGG-A
260 CCCTCTGCGTGCTGTCG-ATCCTGC-TGCCGCAACCCCTGGTCCGGTCTCATCTTAGACTGGGAA
* * * * *
19047054 TGAGACT-CATATGCCTAAGCCAACCAACGAAAACAAAC-GGCCGGGC--A-GGGTGGGACACTA
323 TGA-ACTCCGTATGCCTAAGCCAACCGACG-AAACGAGCAGG-CGGGCGGACGGGCGGG-CACT-
* *
19047114 AAC-CCGGCCA-AGAGACGGGATGCACTAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
383 -ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
*
19047177 CATCTTTAATATTTCTGCATGCCAATG-CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
447 CATC-TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
*
19047241 AAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCCACGA-TTTTGAAACT
511 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT-CACGATTTTTGAAACT
* * *
19047305 TTTTGCGG-TC-AGGA-TTTTT-AAATTTTTTCGGAAAGAGTTTTGTCCCCAAACTTGGTAGACA
575 TTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * * *
19047366 TGATCCTTGTATTTTTGTTGGCATGCACAAAGAAATTTAGCCAAAAACTCGTAGTGTACAAGATT
639 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * *
19047431 TTGTGACCATTTG-AAAAAGTG-CCCCATTTCAAACACTTTAATGGCTACTGGCAGTAAAACTGT
704 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
19047494 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
769 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
*
19047559 ATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCAC
834 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *
19047602 ACCCCCCGGCCCCCCGATCATC-AGAACCCCAATGTCGTCGGTCAGGTTCTCC-AGCGAAGC-TC
1 ACCCCCCGGCCCCCCGATCGTCGA-AACCCCAATGCCGTCGGTCAGGTTCTCCGA-TGATGCTTC
* * **
19047664 CAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTAC
64 GA-CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGT
* *
19047729 CGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATTTTTAGATTGGGAATGA
128 CGCAACCC----T-TG----G-TC-----C---G---G---TCCG-A-TCTTAGACTGGGAATGA
* *
19047794 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGG
167 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* ** * *
19047859 ATGAGCAAGCCGGGGATCGACCGGGTCCCACTCTTCGTGCTG-CTGATCCTGCTGCCGCAA-CCC
232 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAACCCC
* * * * *
19047922 TCGGTCCGGT-TCGATCTTAAACTGGCAAGGAACTCCGTATGCCTAAGCCAACTGACAAAACGAG
296 T-GGTCCGGTCTC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
** *
19047986 C-GGACGGGCGGGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGAATCGA
359 CAGG-CGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
* ** **
19048050 TAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTGTGTGCCAATGCCATTTTTATTTCTT
423 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
* *
19048115 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGACGACTCGGTTTCT
488 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * *
19048180 ATTTTTCACAAATTTTGAAACTTTTTGTGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTT
553 ATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTT
** * *
19048245 TGGCCCCAAACTTTTTAGACCTGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTCAGCTAA
618 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* * * *
19048310 AAACTCGAAGTGTACAAGATTTTTTGACCAATTGAAAAATGTGTCCCCATTTTAGACACTTTAAT
683 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
*
19048375 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGTTCTCGAGGTTT
748 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * * *
19048440 GATGAGGGATAAGGGGCCAATAAAATGGCCAAGTACCAACACCCATCGCACATCATGTGCGCAC
813 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * * ** *
19048504 ACCCCCTGGCCCCCCCAATCATCGAAACCCCAATGTCGTCAGTCAGGTTCTCCGGCGATGCTCCG
1 ACCCCCCGG-CCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTCG
* * * * * * **
19048569 ATGATGGGGCCCCGATGAAGAAAAATGTGGTACCACCACATGTCCGAGCCCAGCATGTGCTACCG
65 ACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCG
* * * *
19048634 TAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAA
130 CAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * * * * * *
19048699 ACGAGCGTGCAGGCGCT-ACCCCAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTG
195 ATGAGCATGCGGGCGCTCA-GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC
* * * ** * * * *
19048763 CCCCTCTGCGTGTTGCCGATCCTCCTATCGCAACCCTTGATCTGGTCTGATCTTAGACTGGGAAT
259 CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCTGGTCCGGTCTCATCTTAGACTGGGAAT
* * * *
19048828 GAACTCTGTATACCTAAGCCAACCAACGAAACGAGC-GAGC-GG-GG--GGGCGGGCACTACGTC
324 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAG-GCGGGCGGACGGGCGGGCACTACGCC
* * * * *
19048888 AGCCAGAGAGACGGTATGCACAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATTTT
388 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * *
19048953 CATATTTTTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
453 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * * *
19049018 CACATGAAGTTTCATGGGAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGG
518 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGG
* * *
19049083 TTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCTCAAACTTGGTAGACATGATCCTTG
583 TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
19049148 TGTTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
648 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
19049213 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGAAAAATCTCA
713 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * * * *
19049278 AATGCTTTTTAAGGGGGTGTGAGTTCTTGAGGTCTCATGAGGGATAGGGGGCCAATATAGGGGCC
778 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
19049343 AAGTACCAGCACCCATCGCACATCACGTGCGCAC
843 AAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * *
19049377 ACCCCCCGGCGCCCCGATCGCCGGAACCCCAAAGCCGCCGGTCAGGTTCTCC---G--G--T---
1 ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTCGA
* * * * * *
19049432 -GATGGGGCCCCGACGAAGAAAAATGCGGCACTAGCACATGCTCGAGCCTAGCATGTGCTGCCGC
66 CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGC
* *
19049496 AACCCTCGGTCCCGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTAGGAACGAACT
131 AACCCTTGGTCCGGTCCGATCTTAGACT-GG---G------A-ATG---A-ACT---------C-
* *
19049561 CTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGACGGGATG
171 C-GTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * * * * * * *
19049626 CGCAACCCGGGGATTGGCCGGGTCTCCCTATACGTTCTGTTGATCCTACTGCCACAACCCTTGGT
235 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCTGGT
* * * * *
19049691 CTGGTCTAATCTTAGACTGGGAATGAACTCCGAATGCCTCAGCCAACCGATGAAACGAGCAGGCG
300 CCGGTCTCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCG
* *
19049756 GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
365 GGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
*
19049821 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATT
430 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* *
19049886 CATACAATAGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTAGTTTTCTATTTTTC
495 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
** * * * *
19049951 ACGATTTTCAAAACTTTTTGTGGTTCGGGACTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCC
560 ACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* *
19050016 AAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCA-GAAAAAATTCAGCTAAAAACTCG
625 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* * *
19050080 AAGTGCACAAGATTTTGTGACCATTTGAAAAAA-TGT-CCAATTACAGACATCTTTAAATGGCTA
690 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA-CTTT-AATGGCTA
* *
19050143 CTGGCAGCAAA-CTATAAAATCTCAAATGCTCTTTAA-GGGGTGTGCGTT-TCTGAGGTTTGATG
753 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATG
*
19050205 AGGGATAGGGGGCCAA-ATAAGGGCCAAGTA-CAGGCATCCA--GCACAT-ATGTGCGCTAC
817 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCA-GCACCCATCGCACATCATGTGCGC-AC
* *
19050262 ACCCCCC-G-CCCCCGATCGTC-AAAACCCAATG-TGT--G-CA---TCT-CGATCAGCAT-CTG
1 ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGAT--G-ATGCT-
* *
19050315 TC-AGCGATGGTG-CCCGACG-AGAAAAATGC-GCACCAG--CATGCCTGAGCCCAGCA-GTGCA
62 TCGA-CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG--
* * * **
19050373 CCGCACTCGTCCTATTCCATCTTAGACTGGAATGCACTCCGTATGCTTAGACTGGGAATGAACTC
124 CTG---TCG--C-A-ACC--C-T----TGG--TCCGGTCCG-AT-CTTAGACTGGGAATGAACTC
* * * * * ** * *
19050438 AGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGAGTGCTCAGCTAGCCAGAGGGTCGGGATAC
171 CGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * ** * *
19050503 GTAAGTCGGGGATC-GACTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGTAACCCTTGGT
236 GCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCTGGT
* * * *
19050567 TCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAAC--G-A-GCG
300 CCGGTCTCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCG
* * * * *
19050628 GGC-GA-------GCATTACGTCGGCCAGAGAGACGGGATGTGCAAGCCATGGATCGATAGTGTG
365 GGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
*
19050685 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTGATGGCTTGTAAATT
430 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * **
19050750 CATACAATGGTCCCTTGAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTCCC
495 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * *
19050815 ACAATTTTCGAAACTTTTTGCGATTC-AGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
560 ACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
** * * *
19050879 CAAACTTGGTAGTTGTGATCCTTGTATTTTT-TTGGCATGCA-TAAAAAATTTAGCTGAAAACTC
624 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
19050942 GAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTAC
689 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
19051007 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAG
754 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* *
19051072 GGATAGCGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGC
819 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* ** *
19051130 ACACCCCCGGCACCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGTGATGC-TC
1 AC-CCCCCGGC-CCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTC
** * * * **
19051194 TGGTGATGGCGCCCTGACGAAGAAAAATGCGGCACCAGCACATGGTCGAGCCCAGCATGTGCTGT
64 -GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGT
* * *
19051259 TGCAATCCTCGGTCCAGTTTGATCTTCGACTGGGAATGAACTCCGTATGCTTAGACTGGGATTGA
128 CGCAA----C---CC---TTG---GTC--C---G---G---TCCG-AT-CTTAGACTGGGAATGA
* * * * * * * *
19051324 ACTCCGTATGCCTAAGTCCACCGATGAAACGAGCGTGCGGGCGCTCAGCCGGTCAAAGGGGCGAG
167 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* ** * * * * **
19051389 ACGCATAAGCCGGGGATCGATCGGGTCCCACTCTGCGTGCTGTCGATCCTGCTACCGTAA-CTAT
232 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCT
* * * * * * *
19051453 CAGTCCAGTTTGATCTTAGACT-GGAATGAACTCCGTATGCCTGAGCCAACCGATGAAATGAGC-
297 -GGTCCGGTCTCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA
* * * * *
19051516 GACCGGGC--A--GGCGGGCACTACGCCAGCCAGAGAGAACGGGATGCACAAGCCATGGATTGAT
361 G-GCGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAG-ACGGGATGCGCAAGCCGTGGATCGAT
* *
19051577 AGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTG
424 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
* * * * *
19051642 CAAATTCTTACAATAGTCCCTTAAGCCCTCACGTGAAGTTCCATGGCAAGACGACTCGTTTTCTA
489 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * * *
19051707 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGCATTTTT
554 TTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
** * *
19051772 GGCCCCAAACTTGGTAGACAAGATCCCTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTACA
619 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
19051837 AGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAAAATGTCCCCATTTCAGACACTTTAA
684 AACTCGAAGTGTACAAGATTTTGTGACCATTTG--AAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
19051902 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGTGAGTTTTGGAGGTT
747 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
**
19051967 TGATGAGGGATAGGGTACCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
812 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
19052032 ACCCCCCTCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCT-C-----TG----
1 A-CCCCC-CGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTC
* * **
19052087 G-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACTTGCCCGAGCCCAGCATGTGCTACC
64 GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC
*
19052151 GCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTACACTGGGAATGAA
129 GCAA-CC-C--T-TGG-----TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAA
* * * * * * *
19052216 ATCCGTATGCCTAAGTAAACCCACAAAACGA-AAGTGCGGGTGCTCAGCCAGCCAGAGGGGCGGG
168 CTCCGTATGCCTAAGTCAACCCACGAAATGAGCA-TGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * * * * *
19052280 ATGCGCAAGCCGGGGATCGGTCGAGTCCCCTTCGGCGTGCTATTGATCCTACT-ACGCAACCCTT
232 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCT
*
19052344 GGTCTGGTC-CAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAA--A-C-
297 GGTCCGGTCTC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA
* * * * * * * * *
19052403 -GAGTG-GG-CGGGCAGGCACTACGTCGACTAGAGAAACGGGATGCGCAAGCCGTGGATTGATAC
361 GGCGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
19052465 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
426 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* ** * * * *
19052530 AATTCATACAGTATTCTCTTAAGCCTTCACGTGAAGTTTCATTGCAAGGCGACTCCTTTTCTATT
491 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * *
19052595 TTTCACTATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGG-GTTTTGG
556 TTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * *
19052659 CCACAAACTTTGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
621 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
19052724 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTATTGGC
686 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
19052789 TATTGGCAGCAAACGTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
751 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
*
19052854 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCATGTGCGCAC
816 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *
19052915 ACCCCCCAGGCCCGCCCGATCGTCGAAACCCCGATACCGTCGATCAGGTTCTCCGATGGTGCTTC
1 ACCCCCC-GGCCC-CCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTC
* * * * * *
19052980 GACGATGGTGCCCAGGTGAAGAAAAATGCGGCACCATCGCTTGCCCAAGCCCAGCATGTGCTGTC
64 GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC
* *
19053045 ACAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCGGTATGCCTAAGTCAACCCACGA
129 GCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * * *
19053110 AATGAGCATGCGGGCGTTCAGCCGGCCAGAGGGGCGGGTTACGCAAGTCAGGGATCGGCCGGGTC
194 AATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC
* * * * *
19053175 CCCCTCTGCATGTTGTCGATCTTGCTGCTGTAACCCCTGGTCCGGTCTCATCTTAGACTGGGAAT
259 CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCTGGTCCGGTCTCATCTTAGACTGGGAAT
19053240 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCG
324 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCG
* * *
19053305 GCCAGAGAGACGGGATGCACAAGCCATGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTC
389 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
19053370 ATATTTCTGCATGCCAATACCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTC
454 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * ** * * *
19053435 ACATGAATTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTTTGAAATTTTTTTACTG
519 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA-CTTTTTGCGG
* *
19053500 TTCGAGATTTTTTAAAATTTTTTCGCAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTA
583 TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
**
19053565 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACATTATTTTGTGACCA
648 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
19053630 TTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
713 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
19053695 AATGCTCTTTAAGGGAGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
778 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
** * *
19053760 AAGTACCAGCACTTATCACACATCATGTACGCAC
843 AAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *
19053794 ACCCCCCAGGCCCGCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGATGATGCTCC
1 ACCCCCC-GGCCC-CCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTC
* * * * *
19053859 GACGATGGTGCCCC-AGTGAAGAAAAATGTGGCACCATCACATGCCCGAGCCCAACATGTACTGC
64 GACGATGGTGCCCCGA-TGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGT
*
19053923 CGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGTTTAGACTGCGAATGG
128 CGCAACCCTTGGTCCGGTCCGATCTTAGACT-GG---G-A------ATG---A-A---C---T--
* * *
19053988 ACTCTGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGTTCAGCCGGGCAGAGGGGCGGG
170 -C-C-GTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * * * * *
19054053 ATGCGTAAGCCAGGGATCAGTCGAGTCCCCTTATGCGTGCTGTCGATCTTGCTACCGCAA-CCCT
232 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCT
* * * * **
19054117 CAGTCCGATCTCATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAATA
297 -GGTCCGGTCTCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA
*
19054182 GGCGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
361 GGCGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* * *
19054247 GGTGGTAGGTGTGTTTAGGCACATCTTCATATTTATGCATGCCAATGCCATTTTTATGGCTTTTA
426 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
19054312 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
491 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
** * * * * *
19054377 TTTCACGATTTTCAAAACTTTTTGCGATTCGGGAATTTTTAAATTTTTTTCGCAAGGAGTTTTGG
556 TTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * * *
19054442 CTCCAAACTTGGTAAACGTGATCCTTTTATTTTTGTTGGCCTGCACAAAAAAATTCAGCTAAAAA
621 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
19054507 CTCGTAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTGAGACACTTTAATGGC
686 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
19054572 TACTGGCAGCAAACCTGTAAAATCTGAAATGCTATTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
751 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
*
19054637 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCATGTGCGCAC
816 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *
19054698 ACCCCCCAGGCCCGCCCGATCGTCGAAACCCCGATACCGTCGATCAGGTTCTCCGATGGTGCTTC
1 ACCCCCC-GGCCC-CCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTC
* * * * * *
19054763 GACGATGGTGCCCAGGTGAAGAAAAATGCGGCACCATCGCTTGCCCAAGCCCAGCATGTGCTGTC
64 GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC
* *
19054828 ACAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCGGTATGCCTAAGTCAACCCACGA
129 GCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * * *
19054893 AATGAGCATGCGGGCGTTCAGCCGGCCAGAGGGGCGGGTTACGCAAGTCAGGGATCGGCCGGGTC
194 AATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC
* * * * * * *
19054958 CCCCTCTGCATGTTGTCGATCTTGCTGTCGTAACCCTTGGTCTGGTCTCATCTTAGACTGGGAAT
259 CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCTGGTCCGGTCTCATCTTAGACTGGGAAT
19055023 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCG
324 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCG
* * *
19055088 GCCAGAGAGACGAGATGCGCAAGCCATGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTC
389 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
19055153 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
454 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * ** * *
19055218 ACATGAATTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTTTGAAATTTTTTTGCTG
519 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA-CTTTTTGCGG
* ** *
19055283 TTCGAGATTTTTTAAAATTTTTTCGCAAGGAGTTTTGGCCCCAAACTTGGTAGACACGATCCTTA
583 TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
19055348 TATTTTTGTTGGCATGCACAAAAAATTTCAGCTAAAAACAT-GAAGTGTACATGATTTTGTGACC
648 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC-TCGAAGTGTACAAGATTTTGTGACC
* *
19055412 ATTCGAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
712 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * *
19055477 AAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATCAGGGC
777 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * *
19055542 CAATTACTAGCACCCATCCCACATCATGTGCGCAC
842 CAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * * *
19055577 ACCCCCCGGGCCCCCGATCG-CCAAACCCCAATACCG-CTGGTCAGGTTCACCGACGATTC-TCT
1 ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTC-GGTCAGGTTCTCCGATGATGCTTC-
* * * *
19055639 GGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATGTGCTG-C
64 GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC
**
19055703 TTTAACCCTCGGTCAGATTTGATCTTAGACTGGCAATGAACTCCGTATGCTTAGACTGGGAATGA
129 -GCAACCCT---T--G----G-TC-----C--G----G---TCCG-AT-CTTAGACTGGGAATGA
** * * *
19055768 ACTTGGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
167 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * * * * *
19055833 ACGGGCAAGTCGAGGATCAGTCGGGTCCCCCTCTGCGTGCTGTCGATCTTGCTGTCGTAA-CCCT
232 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCT
* * * *
19055897 CGATTCGGTC-CGATCTTAGAATGGGAATGAACTCCGTATGCCTCAGCCAACCGACGAAACGAGC
297 -GGTCCGGTCTC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
** * * * *
19055961 AGGCGGATGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCACAAGCCATGGATCGATA
360 AGGCGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* * * * * *
19056026 GGGTGTTAGGCGAGTTTAGGTACATCTTCATATTTCTACATGCCAGTGCCATTTTTATGGCTTGT
425 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGT
* *
19056091 AAATTCATACAATGGTGCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTAT
490 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
** * * *
19056156 TTTTCACGATTTTCAAAAC-TTTTACGGTTTC-AGATTTTTTTAAATTTTTTTGGAAGGAGTTTT
555 TTTTCACGATTTTTGAAACTTTTTGCGG-TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* * * *
19056219 GCCCCCAAAGTAGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
619 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
19056284 AACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATG
684 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
19056349 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTTGAGGTTTG
749 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * * * *
19056414 ATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCACACATCATGTACGAAC
814 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * ** * ** *
19056477 ACCACCTCGGCCCCCCCGATCATCGGAACCCTAATATCGCCAATTAGGTTCTCC---G--G--T-
1 ACC-CCCCGG-CCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTC
*
19056534 ---GATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGA-CCCAAGCATGTGCTGC
64 GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC-AGCATGTGCTGT
* *
19056595 CACAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTGGACTGGGAATGA
128 CGCAACCCT---T---G---G-TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGA
* * * * *
19056660 ACTCCGTATGCCTAAATCAACACACG-AATCAGCATGCGGGCGCTCAG-CGGTCGGAGGGGCGGG
167 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * *
19056723 ATGCGTAAGCCGGGGATTGGTCGGGTCCCCCT-TACGTGCTG-CGATCCTGC-GCTGCAACCCTC
232 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCC-C
* * * * *
19056785 T-ATCTCGGTC-AATCTTAGACTGGGAATGAAC-CTGTATGCCTAAGCCAACCAACGAAACGAGT
296 TGGTC-CGGTCTCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * * * * *
19056847 GGGCGGGCGGGCGGACGGGCACTACACCAGCCAGAGAGACGGGATGCGCAAGCCTTGGATCGATA
360 AGGCGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* ***
19056912 GGGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGT
425 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGT
* *
19056977 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTTTAT
490 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * * *
19057042 TTTTCATGATTTTTGAAACTTTTTGCTGTTCGGGATTTTTTAAAATTTTTTCAGAAGGTGTTTTG
555 TTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG
* * * * *
19057107 GCCCTAAACCTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCATAAAACAATTCAGCTAAAA
620 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * * *
19057172 ATTCGAGGAGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT-AAACACTTTAATGG
685 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* *
19057236 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTGA
750 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
19057301 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
815 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
** * * * * * *
19057363 ACCCCCTAGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGG
1 ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTCGA
* * * * * *
19057428 TGATGGTGCCTCGGTGAAGAAAAATACGGCACCAGCACATGCCTGA-CCCAACATGT
66 CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
19057484 ATTGCCGTAA
Statistics
Matches: 10690, Mismatches: 1324, Indels: 938
0.83 0.10 0.07
Matches are distributed among these distances:
854 4 0.00
855 15 0.00
856 23 0.00
857 56 0.01
858 30 0.00
859 38 0.00
860 138 0.01
861 316 0.03
862 165 0.02
863 95 0.01
864 397 0.04
865 189 0.02
866 69 0.01
867 132 0.01
868 150 0.01
869 154 0.01
870 66 0.01
871 54 0.01
872 90 0.01
873 559 0.05
874 37 0.00
875 28 0.00
876 275 0.03
877 367 0.03
878 418 0.04
879 697 0.07
880 19 0.00
881 19 0.00
882 28 0.00
883 230 0.02
884 79 0.01
885 184 0.02
886 799 0.07
887 635 0.06
888 100 0.01
889 160 0.01
890 373 0.03
891 531 0.05
892 163 0.02
893 29 0.00
894 72 0.01
895 97 0.01
896 59 0.01
897 175 0.02
898 240 0.02
899 20 0.00
900 437 0.04
901 26 0.00
902 730 0.07
903 135 0.01
904 429 0.04
905 359 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (876 bp):
ACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTTCGA
CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGC
AACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
TGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCC
CCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCCTGGTCCGGTCTCATCTTAGACTGGGAATGA
ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGGC
CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTC
GAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
TACCAGCACCCATCGCACATCATGTGCGCAC
Found at i:19053976 original size:26 final size:26
Alignment explanation
Indices: 19053947--19053997 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
19053937 CGGTCCGATC
*
19053947 TTAGACTGGGAATGAACTCCGTATGT
1 TTAGACTGCGAATGAACTCCGTATGT
* *
19053973 TTAGACTGCGAATGGACTCTGTATG
1 TTAGACTGCGAATGAACTCCGTATG
19053998 CCTAAGTCAA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.25, C:0.16, G:0.27, T:0.31
Consensus pattern (26 bp):
TTAGACTGCGAATGAACTCCGTATGT
Found at i:19057627 original size:26 final size:26
Alignment explanation
Indices: 19057598--19057650 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19057588 TCGGTCTGAT
19057598 CTTAGACTGGAAATGAACTCTGTATG
1 CTTAGACTGGAAATGAACTCTGTATG
**
19057624 CTTAGACTGTCAATGAACTCTGTATG
1 CTTAGACTGGAAATGAACTCTGTATG
19057650 C
1 C
19057651 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.21, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCTGTATG
Found at i:19059216 original size:717 final size:711
Alignment explanation
Indices: 19057754--19059990 Score: 2866
Period size: 717 Copynumber: 3.1 Consensus size: 711
19057744 CTGCCAATCC
* *
19057754 TGCTACCGCAACCCTTGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCC-TCGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
19057819 CCGACGAAATTAGCGGGCGGGCAGGAGGGCACTACGTCGGCCAGAAAGACGGGATGCACAAGCCG
65 CCGACGAAATGAGCGGGCGGGCCGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG-CG
* * * *
19057884 TGGATCGATAGGGTGGTAAGTGGGTTTAGGAACATCTTCATATTTCTGTGTGCCAATGCCATTTT
129 TGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
19057949 TATGGCTTGTAAATTCATACAATGGTCCATTAGGCCTTCACGTGAAGTTTCATGGCAAGACGACT
194 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
19058014 CGTTTTCTATTTTTCATGATTTTTGAAA-TTTTTGCGGTTCGAGATTTTTTAAAACTTTTTCGGA
259 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * ** * * *
19058078 AGGCGTTCTGGCGTCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCACGCACAAGGAAAT
324 A-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAAT
* *
19058143 TTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTGGAAAAAAGTGTCCCCATTTCAGAC
388 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
19058208 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAT-TGAGTTC
453 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG-TGTGAGTTC
**
19058272 TCTTGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
517 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** *
19058337 GTGCGCACACCCCCCCGGCCCCCCGATCACCGGAACCATAATGCAGCCGGTCAGGTTCTCCGGTG
582 GTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCAGTCGGTCAGGTTCTCCGGTG
* *
19058402 ACGCTCCGACGATGGCGCCTCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATT
647 ACGCTCCGACGATGGCACCTCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * * *
19058467 TGCCGCTGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGTTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
19058532 CCGACGAAATGAGCGGGCGGGCGGGCGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
65 CCGACGAAATGAGCGGGCGGGC---CGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
* *
19058597 CTGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACGTGCCAATGCCA-
127 C-GTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* *
19058661 TTTTAGAGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
191 TTTTA-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** ** *
19058726 GACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTT
255 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
19058791 CGGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAG
320 CGGAAG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAG
* *
19058856 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTCCCTATTTC
384 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
19058921 AGACACTTTAATGCCTACTGGCAGCAAACTTGCAAAATCTCGAATGCTCTTTAAGGGGGTGTGAG
449 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
19058986 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAGAC
514 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
19059051 CATGTGCGGACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
579 CATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCAGTCGGTCAGGTTCTCCG
* * * * * * **
19059116 GTGATGCTCCGACGATGGTACC-CGGGCGAGGAAAAATGCGGCACCAGCACTTGGTCGAGCCCAG
644 GTGACGCTCCGACGATGGCACCTC-GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
19059180 CATG
708 CATG
*
19059184 TGCTGCCGCAACCCTCAGTTCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGG
1 TGCTGCCGCAACCCTC-GTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC-----CT--
* * * *
19059249 GAATGAACTCCATATGCTTAGACTGGGAATGAACTCGGTATGCCTAAGTCAACCGACAAAACGAG
58 -AA-G----CCA-A--C--CGAC--GAAATG-A-GCGG---G-C---G------GGC----CG-G
* * *
19059314 CAAGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGTTCGATAGGGTGGTAGGT
90 --TG--GGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC-GTGGATCAATAGGGTGGTAGGT
* *
19059379 GTGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
150 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* *
19059444 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCAGGATT
215 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* *
19059509 TTTGAAACTTTTTGCGGTTCAGGATCTTTTAAAATTTTTTCGGAATGAGTTTTGGCCCCAAACTT
280 TTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAA-GAGTTTTGGCCCCAAACTT
* * * * *
19059574 GGTAGACGTGATGCTTGCATTTTTGTTGACTTGCACAAAAAAATTCAGCTAAAAACTTCGAAGTG
344 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAATTCAGCTAAAAAC-TCGAAGTG
19059639 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
408 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
19059704 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTTCTCAAGGTTTGATGAGGGATAG
473 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAG
* ** *
19059769 GGGGCCAATATAAGGGCCAAGTTCCAGCACCCATTACACATCATGTGCGCACACACGCCCCGGAC
538 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCCCGG-C
* * * *
19059834 CCCCCGATCGCTGGAACCCCAATGCTGTCGGTCAGGATCTCC---GACGAT--G--G-T-GC-CC
601 CCCCCGATCGCCGGAACCCCAATGCAGTCGGTCAGGTTCTCCGGTGACGCTCCGACGATGGCACC
** *
19059889 -CGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGGATG
666 TCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * * *
19059934 TACTGCCGTAACCCTCGATCCGATTCTGATCTTAGACTGGGAATGAATTCCATATGC
1 TGCTGCCGCAACCCTCG-TTCG-GTCCGATCTTAGACTGGGAATGAACTCCGTATGC
19059991 TTAGACTAGG
Statistics
Matches: 1331, Mismatches: 134, Indels: 80
0.86 0.09 0.05
Matches are distributed among these distances:
712 4 0.00
713 75 0.06
715 6 0.00
716 178 0.13
717 426 0.32
718 3 0.00
722 2 0.00
725 2 0.00
726 1 0.00
730 3 0.00
731 1 0.00
733 1 0.00
735 3 0.00
737 5 0.00
738 1 0.00
739 3 0.00
742 1 0.00
743 1 0.00
746 1 0.00
749 1 0.00
750 54 0.04
751 34 0.03
752 3 0.00
753 3 0.00
754 2 0.00
756 2 0.00
758 283 0.21
759 185 0.14
760 7 0.01
761 40 0.03
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (711 bp):
TGCTGCCGCAACCCTCGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAATGAGCGGGCGGGCCGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCGTG
GATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
TTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
GCACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCAGTCGGTCAGGTTCTCCGGTGACGC
TCCGACGATGGCACCTCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
Found at i:19059291 original size:26 final size:26
Alignment explanation
Indices: 19059213--19059284 Score: 144
Period size: 26 Copynumber: 2.8 Consensus size: 26
19059203 TCGGTCCGAT
19059213 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19059239 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19059265 CTTAGACTGGGAATGAACTC
1 CTTAGACTGGGAATGAACTC
19059285 GGTATGCCTA
Statistics
Matches: 46, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 46 1.00
ACGTcount: A:0.31, C:0.19, G:0.24, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19059993 original size:26 final size:26
Alignment explanation
Indices: 19059964--19060016 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19059954 CGATTCTGAT
* *
19059964 CTTAGACTGGGAATGAATTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
*
19059990 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
19060016 C
1 C
19060017 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:19062634 original size:26 final size:26
Alignment explanation
Indices: 19062605--19062657 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19062595 CCAGTCCGAT
19062605 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19062631 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19062657 C
1 C
19062658 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19063043 original size:892 final size:890
Alignment explanation
Indices: 19061099--19072026 Score: 13453
Period size: 892 Copynumber: 12.2 Consensus size: 890
19061089 TGATCGGGCG
* *
19061099 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATGGGGTGGTAGGTGGGTTCAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
19061164 CATATTTCT-CTGTGGCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
66 CATATTTCTGC-ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
*
19061228 TCACGTGAAGTTTCATGGCAAGACGACTCTTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCG
130 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTTG-G
* * * * *
19061293 GTTCGGGATTTTTTAAAATTTTTTCAGAAAGATTTTTTGCCCCAAACTTGTTAGACGTGATCCTT
193 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* *
19061358 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAATTTGTGACC
258 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
19061423 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
323 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * *
19061488 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGTTAGGGGGCCAGTATAAGGGC
388 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
** * * *
19061553 CAAGTACCAGTGCCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATAGTCGGAACCC
453 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCGTCGGAACCC
* ** ** * *
19061618 CAATGCCGCCGGTCAGGTTCTCGGACGATGCTCCGACGACAACGCCCCGGTGATGAAAAATGTGG
518 CAATGCCGCCGGTCAGGTTCTC---CG--G-T--GATG---GTGCCCCGACGAAGAAAAATGCGG
* * *
19061683 CACCAGGACATGCCCAAGCCCAGCATCTGCTGCCGCAACCCTCGGTCC-G---G----T---CT-
572 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
*
19061736 -G-AT---CT---TA--C----ACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGA
637 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * * * * *
19061787 GCGTGCGGGCGCTCAACCAGCCAGAGGGGCGAGATACGAAAGCCGGGGATTGGCCGAGTGCCCCT
702 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCT
* * * ** *
19061852 CTGCGTGCTGTCGATCCTGCTGCTGCAACCCAT-GGTCCGGTCCAATCTTACACTGGGAATGAAC
767 CTGCGTGCTGCCGATCCTGCTGCCGCAACCC-TCGGTCTGGTCTGATCTTAGACTGGGAATGAAC
* * * * * * *
19061916 TCCGTATGCCTAAGCCAACTGACGAAAC-AGGCGGACGGGCAGGCGGGCGGGCAGTACACC
831 TCCATATGCCTAAGCCAACCGACGAAACGA-GCGGGCGGGCGGGAGGGCGGGCACTACGCC
* * ** **
19061976 TGCCAGAGCGATAGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*** *
19062041 CATATTTCTATGTGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * * *
19062106 CACGTGAAGTTTCATGGCAAGAGGACTCGTTTTCTATTGTTCATGATTTTGAAAGTGTTTGGTTG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTAAAACTTTTTGG--G
* * * * * *
19062171 TTCGAGATTTTTTAAAATTTTCTC-GACAGGATTTTTGACCCCAAATTTGGTAGACATGATCCTT
194 TTCGGGATTTTTTAAAATTTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
19062235 GTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
258 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
19062300 ATTTGAAAAAAGTGTCTCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
323 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * * * *
19062365 AAAAGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGTCATTATAAGGGC
388 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* *
19062430 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCAATCGTCGTAACCC
453 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCGTCGGAACCC
19062495 CAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
518 CAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
*
19062560 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTC
583 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
* * *
19062625 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGTGGGCG
648 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * *
19062690 CTCAGCCGACCAGAGAGGTGGGATGCGCAAGCCGGGGATCGGTCGAGTCCCCCTCTGTGTGCTGC
713 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * *
19062755 CAATCCTGCTACCGCAACCCTCGGTCTGGTATGATCTTAGACTGGGAATGAACTCCATATGCCTA
778 CGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTA
*
19062820 AGCCAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTATGCC
843 AGCCAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTACGCC
*
19062868 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTCGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
19062933 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
*
19062998 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTT-GGG
* *
19063063 TTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTG
194 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
19063128 TATTTTTGTTGGCATGCACAAAATATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCA
259 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
19063193 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCA
324 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * *
19063258 AATGATCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCC
389 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
19063323 AAGTACCAGCACCCATCGCACATAATGTGCGCACACCCCCCG-GCCCCCCGATCGCCGGAACCCC
454 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCGTCGGAACCCC
* * **
19063387 AATGCCGTCGGTCAGGTTCTCCGACGATACTCCGGTGATGGTGCCCCGGCGAAGAAAAATGTAGC
519 AATGCCGCCGGTCAGG---T-------T-CTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGC
* * * * * * *
19063452 ACCAGCACATGCCCGAGACCAGTATGTGCTACCGCAACCGTCAGTCTGGTCTGATCTTAGACTGG
573 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
*
19063517 GAGTGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
638 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * ** *
19063582 CGTGCGGGTGCTCAGCCGGCTAGAGGGGCAGGATGCGCAAGTCGGGGAAT-GCCCAGGTCCCCCT
703 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG-ATCGGTCGGGTCCCCCT
* * * *** * * *
19063646 CTGTGTGCTGCCGATCTTACTTTTGCAACCCTTGGTTTGGTCTGATCTTACACTGGGAATGAACT
767 CTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACT
* *
19063711 CCATATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCA-GGCGGGCACTACGTC
832 CCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG-AGGGCGGGCACTACGCC
* * *
19063770 AGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*
19063835 CATATTTCTGCATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * *
19063900 CACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTC-TCAATTTTTGAAACTTTTTGTA
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT-GA-TTTTAAAACTTTTTG-G
** * * ** *
19063964 GTTCAAGATTTTTTAAAATTTTTTC-AAAAGAGTTTTGGGTCCAAACTTGGTAAACGTGATCCTT
193 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
19064028 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACC
258 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
19064093 ATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTC
323 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
19064158 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
388 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
** * * * *
19064223 CAAGTACCAGCACCCATCGCACATCATCCGTGCACACCCCCCCAGCCCACCCGATCGCCGGAACC
453 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGA-CCCCCCCGATCGTCGGAACC
* * * * *
19064288 CCAATGCCACCGATCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGGAGAAAAATGCA
517 CCAATGCCGCCGGTCAGGTTCT-C--CG--G-T-----GATGGTGCCCCGACGAAGAAAAATGCG
* * ** * * * * * * *
19064353 GTACCAGCACCTGCTAGAGTCGAGCATGTGCTACCACAACCTTCGTTCCGGTCCGATCATAGACT
571 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
* **
19064418 GGGAACGAACTCCGTATGCCTTAGACTATGAATGAACTCCGTATGCCTAA-TCAACCCACGAAAC
636 GGGAATGAACTCCGTATG-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * **
19064482 GAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCCGGATGCACAAGACAGGGATCGACCGGGTCCCC
700 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC
* * ** * * **
19064547 CTCTGCATGCTGTCGAT-CTGCTATCGTAAACCTTAGTC-GGT-TCGATCTTAGACTGGGAATGA
765 CTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGA
* * * *
19064609 ACTCCATATGCCTAAGCCAACCGAC-AGAACAAACGGGCGAGCGGACGCACAGGCGGGCACTACG
829 ACTCCATATGCCTAAGCCAACCGACGA-AACGAGCGGGCGGGCGG--G-A-GGGCGGGCACTACG
19064673 CC
889 CC
* *
19064675 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATTTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * **
19064740 CATATTTCTACGTGCCAATTACATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * *
19064805 CACGTGAAGTTTCATGGCAAGAAGACTCGTTTT-TATTTTTCAAGATTTTCAAAATTTTTTCGGT
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTTGGGT
* * * * * *
19064869 TCGGGATTTTTTAAAATTTCTTCGAAAGGATTTTTGGGCCCAAACTTGGCAGACATGATCCTTGT
195 TCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * *
19064934 CTTTTTCTTGGCATGCACAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
260 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
*
19064999 TTGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
325 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
*
19065064 ATGCTCTTTAAGGGGGTGTGAGTT-TGCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCC
390 ATGCTCTTTAAGGGGGTGTGAGTTCT-CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* *
19065128 AAGAACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCC
454 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGACCCCCCCGATCGTCGGAACCC
* * *
19065193 CAATGCTGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGGGCCTCGAC-AGAGAAAAATGCA
518 CAATGCCGCCGGTCAGGTTCTCCGGTGA---T--G--G-T---GCCCCGACGA-AGAAAAATGCG
* * *
19065257 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCAGACAACCCTCGG-CCTGATCTGATCTTAGA
571 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG-CAACCCTCGGTCC-GGTCCGATCTTAGA
19065321 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
634 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * *
19065386 CGAGCGTGCGGGCGCTCAGCCAGCCAGA-GGGCGGGATGCGGAAGCCGGGGATCGGTCGGGTCCA
699 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCC
* * * * *
19065450 CCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTTGATCCGGTCTGATCTTAGACTGGGAATGA
764 CCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGA
** * * *
19065515 ACTCTGTATGCCTAAGGCAACCGACGGAACGAGCAAGTGGGCGGACGGGCGAATGGGCGGGCACT
829 ACTCCATATGCCTAAGCCAACCGACGAAACGAGC----GGGCGGGC-GG-G-A-GGGCGGGCACT
19065580 ACGCC
886 ACGCC
*
19065585 GGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*
19065650 CATATTTCTGCATGCCAATGTCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
19065715 CACGTGAAGTTTTAATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTAAG
131 CACGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTT-GG
* * * ** * * *
19065780 TTTCGGGATTTTTTAAAATTTTTTTGGAAGGATTTTTCACCCAAAACTTGGTAGATGTGATACTT
193 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * * *
19065845 TTATTTTT-TTCAGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGAT
258 GTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* *
19065909 CGTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCT
322 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
19065974 AAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTCGATGAGGGATAGGGGGCCAATATAAGGG
387 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * *
19066039 CCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCTCCCAGCCCCCCTGACCGTCGGAA
452 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGA-CCCCCCCGATCGTCGGAA
* * * *
19066104 CCCTAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCAACGAA-AAAAATA
515 CCCCAATGCCGCCGGTCAGGTTCT-C--CG--G-T-----GATGGTGCCCCGACGAAGAAAAATG
* * * * *
19066168 CGGCACCAACACATGCTCGAGCCCAACATGTGCTACCGCAA----C---CC--T-C-A----A-T
569 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
* *
19066217 CT--G-AT---CT--G-AT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAA
634 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * ** * *
19066272 CGAGCGTGCAGGCGCTCAGTCGGCCAGAGGGGCGGGATGCATAAGCCGAGAATCGGTCGGGTCCC
699 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCC
* * ** * * * * *
19066337 CCTCTTCGTGCTGCCTATCCTATTGCTGCAACCTTCTGT-TCAGTCTGATCTTAGACTAGGAATG
764 CCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATG
* * ** * * * * *
19066401 AACTTCGTATGCGAAAGCCAATCGATGAAATGAGCGGGC-GGC--CA-GGCAGGCACTACGCC
828 AACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTACGCC
*
19066460 GGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
19066525 CATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
19066590 CACGTGAAGTTTCATGGCAATACGACTCGTTTTCTATTTTTCATGATTTTCCAAACTTTTTACGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTT-GGG
** * *
19066655 TTCGGGATTTTTTAAAATTTTTTTTGAAGGCGTTTTGGCCCCAAACATGGTAGACGTGATCCTTG
194 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
19066720 TATTTTTGTTGGCATGCACAAAAAAAGTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCA
259 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
19066785 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
324 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
19066850 AATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
389 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* **
19066915 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTCGGCCCCCCCGATCACCGGAACC
454 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGACCCCCCCGATCGTCGGAA-C
* * * ** **
19066980 CCCAATGCCACGTCAGGTTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCA
516 CCCAATG-C-CG-CCGG-T-C-A-GGTTCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCA
* * *
19067045 CTAGCACATGCCCGAGGCCAGCATGTGCTGCCGCAGCCCTCGGTCCGGTCCGATCTTAGACTGGG
574 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG
* *
19067110 AATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA-CCACGAAATGAGC
639 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * ** *
19067174 TTGCGGGCGCTCAGACGGCCAGA-GGGCGGGATGCACAAGCCAAGGATC-GTCGGGTTCCCCTTC
704 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG-TCCCCCTC
* * * * * * *
19067237 TACGTGCTACCGATCTTGCT-TCACAAACCTCAGT-TGGT-TCGATCTTAGACTGGGAATGAACT
768 TGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACT
* * * *
19067299 CCATATGCCTAAGCCAACCAACGAAACGAGCGGACGGGCGGGCAGGCGGGCGGGCACTATGTC
832 CCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG-A---GGGCGGGCACTACGCC
*
19067362 GGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * *
19067427 CATATTTTTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAATCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
19067492 CACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTTG-GG
* *
19067557 TTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCACCAAACTTGGTAGACGTGATCCTTG
194 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * *
19067622 TATTTTTTTTGGCACGTA-AAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
259 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
19067686 TTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
324 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
19067751 AATGCTCTTTAA-GGGGTGTGGGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
389 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * *
19067815 AAGTACCAGCACCCATCGCGCATCACGTGCGAACACCCCCCGACTCCCCCGATCG-CTGGAACCC
454 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCGTC-GGAACCC
* * * *
19067879 CAATGCCTCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCTGGCGAAGAAAAATGCAG
518 CAATGCCGCCGGTCAGGTTCT-C--C---G----G-TGATGGTGCCCCGACGAAGAAAAATGCGG
* ** *
19067944 CACCAGCACATGCTCGAGCCCAGCATGTGCTGCAACAACCCTCGGTCTGGTCCGATCTTAGACTG
572 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* * * *
19068009 GGAATGAACTCCGTAAGCTTAGACTGGGAATGAACT-CGTATGCCTAAGTCAACCAATGAAATGA
637 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
** * * * * * ** *
19068073 GCACGCGGGCGCTTATCCGGCCAGAGGGGCGGGATACGCGAGCCGAGGATCGACCGGGTCCCCCA
702 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCT
* * ** ** * *
19068138 CTACGTGCTAG--GAT-CTGGCTGCTGCAATGCTCGGTCCAGTCTAATCTTAGACTGGAAATGAA
767 CTGCGTGCT-GCCGATCCT-GCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAA
* ** * * * * * * * *
19068200 CTCTATATGAATAAGCCGACCGATGAAACAACCTGGCGGGCGAGCGGGC-GGCACTACGTC
830 CTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTACGCC
* * *
19068260 GGCCAGAGAGACGGGATGCTCAAGCCGTGGATCGACAGGGTGGTAGGTGGGTTTAGGCACATCCT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*
19068325 CATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
*
19068390 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTTG-GG
* * * * * ** * * *
19068455 TTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGGCCTAAACTTATTAGACGTAATGCATG
194 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
** *
19068520 -ATTTTTGTTGGCATGCACAAAAAAATTCTTCTAAAAACTC-AAGTGTATAAGATTTTGTGACCA
259 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * *
19068583 TTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTCA
324 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * * * *
19068648 AATGCTCTTTAAGGGGGTGTTATTTCTTGAGGTTTGATAAGGGAGAGGGGGCCAATATAAGGGCC
389 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * * *
19068713 AAGTACTAGCGCCCATCGCACATCATGTGCGCACACCCTCCCGGCCCCCTCGATCG-CCGAAACC
454 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCGACCCCCCCGATCGTCGGAACCC
* **
19068777 CAATGCCGTCGGTCAGGTTCTCCAGGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATATGGC
518 CAATGCCGCCGGTCAGGTTCTCC--G--G-T-----GATGGTGCCCCGACGAAGAAAAATGCGGC
* * *
19068842 ACCAGCACATGCCCGAGCCCAGCA--TGCTGTCGTAACCCTCAGTCCGGTCCGATCTTAGACTGG
573 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
*
19068905 GAATGAACTCCGTATGC-----C------T-AA----G--T--C---G---ACCCACGAAATGAG
638 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * *
19068944 CGTGCAGGCGCTCAGCCGGCCACAGAGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTC
703 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTC
* * * *
19069009 TGTGTGCTGCCGATCCTGCTGCCACAAACCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTC
768 TGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTC
* * * **
19069074 CGTATGCCTAAGCCAACAGACGAAATGAGCGGGCGGGC----GGGCGGTTACTACGCC
833 CATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTACGCC
** * * *
19069128 GGTGAGAGAGACGAGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGTACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * *
19069193 CATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGCCCCTTAAACCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * * *
19069258 CACATGAAGTTTCATGGCAAGACTACTCATTTTCTATTTTTCTTGATTTTCAAAACTTTTTATGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTT-GGG
* * * * *
19069323 TTCGGGATTTTTTTAAATTTTTTCGGAAAGATTTTTGGCACCAAACTTGGTAGACATGATCCTTG
194 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * *
19069388 TATTTTTTTTGGCACGCAAAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
259 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
19069453 TTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCA
324 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
19069518 AATGCTCTTTAAGGGGG-GTGGGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
389 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
19069582 AAGTACCAGCACCCATCGCACATCACGTGC-CAACACCCCCCG---CCCCCGATCGTCGGAACCC
454 AAGTACCAGCACCCATCGCACATCATGTGCGC-ACACCCCCCGACCCCCCCGATCGTCGGAACCC
* ** * *
19069643 CAATGCCGCCGGTTAGGTTCTCCGACGATGCTCCGGTGATGGTGCCTTGGCGAAGAAAAATGCAG
518 CAATGCCGCCGGTCAGG---T-------T-CTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGG
* * * * * * *
19069708 CACCAGCAGATGCCCGAGCCGAGTATGTGCTGCAGCAACCCTCAGCCCGGTCCGATCTTAGATTG
572 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* * *
19069773 GGAATGAATTCCGTAAGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGA
637 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * *
19069838 GCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCGAGCCGCGGATCGATCGGGTCCCCCT
702 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCT
* * * * *
19069903 -TGCGTGCTGCCGATCCTACTGCTGCAACCCTTGGTCCGGTCTGATCTTAGACCGGGAATGAACT
767 CTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACT
* * * ** * *
19069967 CTATATGCTTAAGCCAACTGACGAAACGAGAAGACGGGCGGGCA-GGCGAGCACTACGCC
832 CCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG-AGGGCGGGCACTACGCC
* *
19070026 GGCCAGAGAGACGGTATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
** * ** *
19070091 CATATTTCTGTGTGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGACCCCTTCAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
*
19070156 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTGCAG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTAAAACTTTTTG-GG
* * *** * * *
19070221 TTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCTATAACCTTGGTAGACATGATTCTTG
194 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
19070286 TATTTTT-TTGGCATGCAAAAAAAAATTCGGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
259 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * * * *
19070350 TTTG-AAAAAGTGTCCCCGTTTAAGACACTTTAATAGCTACTGGTAGCAAACCTGTAAAATCTCC
324 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
19070414 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTAATGAGGGATAGGGGGCCAATATAAGGGCC
389 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* *
19070479 AAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCCCCGACCACCCCGGATCGTCGGAACC
454 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGACC-CCCCCGATCGTCGGAACC
* * ** ** *
19070544 CCAATGTCGCCGGTCAGGTTCTCTGACGATGGTAG-CCCGGTGAAGAAAAATGCGACACCAGCAC
517 CCAATGCCGCCGGTCAGGTTCTCCGGTGATGGT-GCCCCGACGAAGAAAAATGCGGCACCAGCAC
* *
19070608 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAAC
581 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * * *
19070673 TTCGTATGCTTAGATTGGCAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGACCGTGCGGG
646 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * *
19070738 TGCTCAGTCGGCCAGAGGGGTGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCTTTGCGTGCT
711 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT
* * * * ** * *
19070803 GTCGATCCTTCTACCGCAACCCTCAGTCTCATCCGATCTTAGACTGGGAATGAACTCCGTATGCC
776 GCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCC
* * * *
19070868 TAAGCCAACCGACGAAACGAACAGGCGGGTGGGCGGGCGGGCACTACGCC
841 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTACGCC
* *
19070918 GGCCAGAGAGACGGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGGACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
**
19070983 CATATTTCTGTTTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
19071048 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTAAAACTTTTT-GGG
**
19071113 TTCGGGATTTTTTAAAATTTTTTCGGAAAAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
194 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
19071178 TATTTTTGTTGGCATGCACAAAAACATTCAGCT-AAAACTCAAAGTGTACAAGATTTTGTGACCA
259 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * *
19071242 TTTGAAAAGAGTGTCCCCATTTCAGACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAATCTCC
324 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
19071307 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATGTAAGGGCC
389 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * *
19071372 AAGTACCAGCACCCATCGCACATCATGTGCGCAAACCCCCCCG-GCCCCTCGATCGCCGGAACCA
454 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGACCCCCCCGATCGTCGGAACCC
* * * * *
19071436 CAATGGCGCTGGTCAGGTTCTTCGATGATGCTCCGATGATGGTGCCTCGACGAAGAATAATGCGG
518 CAATGCCGCCGGTCA-G------G-T--T-CTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGG
* * * *
19071501 CACCAGCACATGCTCGAGCCCAACATGTGCTGCCACAACCCTCGGTCCGGTTCGATCTTAGACTG
572 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* *
19071566 GGAATGAAC-CTCGTATGCTTAGATTGGGAATAAACTCCGTATGCCTAAGTCAACCCAC-AGAAC
637 GGAATGAACTC-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA-AAC
* * * * * ** * * * *
19071629 GAGCATGTGGGCACTCAGCC--CCAGAAGGGC-GGATGC-AAAATC-GGGATCAGCCTGGTCACC
700 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC
* * * *
19071689 CTCTACGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAA
765 CTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAA
* * * *
19071754 CTTCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGC---A-GGCCGGCACTACGCC
830 CTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTACGCC
* *
19071811 GGCCAGAGAGACGGGATGTGCAAGCCGTTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*
19071876 CATATTTCTGCATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* **
19071941 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATCTTCGAAACTTTTTGTGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT-TTTAAAACTTTTTG-GG
*
19072006 TTCGGGATTTTTTAAGATTTT
194 TTCGGGATTTTTTAAAATTTT
19072027 GTGACCATTT
Statistics
Matches: 8733, Mismatches: 1035, Indels: 550
0.85 0.10 0.05
Matches are distributed among these distances:
865 9 0.00
866 84 0.01
867 49 0.01
868 241 0.03
869 162 0.02
870 172 0.02
871 84 0.01
872 44 0.01
873 2 0.00
874 341 0.04
875 164 0.02
876 14 0.00
877 491 0.06
878 3 0.00
879 6 0.00
880 5 0.00
881 5 0.00
882 7 0.00
883 9 0.00
884 1 0.00
885 1 0.00
886 70 0.01
887 110 0.01
888 4 0.00
889 1 0.00
890 8 0.00
891 261 0.03
892 1028 0.12
893 413 0.05
894 145 0.02
895 142 0.02
896 120 0.01
897 440 0.05
898 681 0.08
899 37 0.00
900 110 0.01
901 597 0.07
902 1028 0.12
903 300 0.03
904 452 0.05
905 262 0.03
906 51 0.01
907 1 0.00
908 1 0.00
910 156 0.02
911 24 0.00
912 34 0.00
913 306 0.04
914 45 0.01
915 2 0.00
917 3 0.00
918 1 0.00
919 1 0.00
920 2 0.00
922 1 0.00
925 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (890 bp):
GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTAAAACTTTTTGGGTT
CGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCGTCGGAACCCCAA
TGCCGCCGGTCAGGTTCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGA
TCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGC
CAACCGACGAAACGAGCGGGCGGGCGGGAGGGCGGGCACTACGCC
Found at i:19063543 original size:26 final size:26
Alignment explanation
Indices: 19063507--19063559 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19063497 CTGGTCTGAT
*
19063507 CTTAGACTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19063533 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19063559 C
1 C
19063560 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19063843 original size:902 final size:902
Alignment explanation
Indices: 19061739--19072026 Score: 13521
Period size: 902 Copynumber: 11.5 Consensus size: 902
19061729 CCGGTCTGAT
* * *
19061739 CTTACACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * *
19061804 CAGCCAGAGGGGCGAGATACGAAAGCCGGGGATTGGCCGAGTGCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * *
19061869 TGCTGCTGCAACCCAT-GGTCCGGTCCAATCTTACACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCC-TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
* * * * * * * * **
19061933 ACTGACGAAAC-AGGCGGACGGGCAGGCGGGCGGGCAGTACACCTGCCAGAGCGATAGGATGCGC
195 ACCGACGAAACGA-GCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
** ** *
19061997 AAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATAC
259 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
19062062 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
324 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * * *
19062127 AGGACTCGTTTTCTATTGTTCATGATTTT-GAAAGTGTTTG-GTTGTTCGAGATTTTTTAAAATT
389 ACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCG--GTTCGGGATTTTTTAAAATT
* * * * * *
19062190 TTCTC-GACAGGATTTTTGACCCCAAATTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCA
452 TTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
19062254 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCT
516 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
19062319 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTTAAGGGGGT
581 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * *
19062384 GTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGTCATTATAAGGGCCAAGTACCAGCACCCATCG
646 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
19062449 CACATCATGTGCGCACACCCCCCGACCCCCCCAATCGTCGTAACCCCAATGCCGCCGGTCAGGTT
711 CACATCATGTGCGCACACCCCCCG-GCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
19062514 CT-C--CG--G-T-----GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
775 CTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
*
19062568 CCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
840 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
19062631 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGTGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
19062696 CGACCAGAGAGGTGGGATGCGCAAGCCGGGGATCGGTCGAGTCCCCCTCTGTGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
19062761 TGCTACCGCAACCCTCGGTCTGGTATGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
*
19062826 CCGACGAAACGAGCGGGCGGGCGGG-AGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCA
196 CCGACGAAACGAGCGGGCGGGCGGGCA-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
19062890 AGCCGTGGATCGATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
19062955 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
19063020 CGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTT
390 CGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
*
19063085 TCGGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
455 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
19063150 ATATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTT
520 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
19063215 CAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGATCTTTAAGGGGGTGTGA
585 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
19063280 GTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
650 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
19063345 TAATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
715 TCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** * ** * *
19063410 ACGATACTCCGGTGATGGTGCCCCGGCGAAGAAAAATGTAGCACCAGCACATGCCCGAGACCAGT
780 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * *
19063475 ATGTGCTACCGCAACCGTCAGTCTGGTCTGATCTTAGACTGGGAGTGAACTCCGTATG
845 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
19063533 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * *
19063598 CGGCTAGAGGGGCAGGATGCGCAAGTCGGGGAAT-GCCCAGGTCCCCCTCTGTGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGG-ATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * *** * ** *
19063662 TTACTTTTGCAACCCTTGGTTTGGTCTGATCTTACACTGGGAATGAACTCCATATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
* * * *
19063727 ACCGACGAAATGAGCGGGCGGGCGGGCAGGCGGGCACTACGTCAGCCAGAGAGATGGGATGCGCA
195 ACCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
19063792 AGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
19063857 ATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * ** ** **
19063922 CGACTCATTTTCTATTTTTC-TCAATTTTTGAAACTTTTTGTAGTTCAAGATTTTTTAAAATTTT
390 CGACTCGTTTTCTATTTTTCAT-GATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
* * ** *
19063986 TTC-AAAAGAGTTTTGGGTCCAAACTTGGTAAACGTGATCCTTGTATTTTTGTTGGCATGCACAA
454 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
19064050 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
519 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
19064115 TTAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
584 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
19064180 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
649 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * *
19064245 ATCATCCGTGCACAC-CCCCCCAGCCCACCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTC
714 ATCAT--GTGCGCACACCCCCCGGCCC-CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * * * * ** *
19064309 TCCGACGATGCTCCGGCGATGGTGCCCCGATGGAGAAAAATGCAGTACCAGCACCTGCTAGAGTC
776 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * * * *
19064374 GAGCATGTGCTACCACAACCTTCGTTCCGGTCCGATCATAGACTGGGAACGAACTCCGTATG
841 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
**
19064436 CCTTAGACTATGAATGAACTCCGTATGCCTAA-TCAACCCACGAAACGAGCGTGCGGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * ** * *
19064500 CTGGCCAGAGGGGCCGGATGCACAAGACAGGGATCGACCGGGTCCCCCTCTGCATGCTGTCGAT-
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
** * * **
19064564 CTGCTATCGTAAACCTTAGT-CGGT-TCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCATATGCCTAAGCC
* * *
19064627 AACCGAC-AGAACAAACGGGCGAGCGGACGCACAGGCGGGCACTACGCCGGCCAGAGAGACGGGA
194 AACCGACGA-AACGAGCGGGCGGGCGG--G--CAGGCGGGCACTACGCCGGCCAGAGAGACGGGA
* * *
19064691 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATTTTCATATTTCTACGTGCC
254 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
**
19064756 AATTACATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
319 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * *
19064821 GCAAGAAGACTCGTTTT-TATTTTTCAAGATTTTCAAAA-TTTTTTCGGTTCGGGATTTTTTAAA
384 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAA
* * * * * * * *
19064884 ATTTCTTCGAAAGGATTTTTGGGCCCAAACTTGGCAGACATGATCCTTGTCTTTTTCTTGGCATG
449 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
19064949 CACAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCC
514 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
19065014 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
579 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
19065079 GTGTGAGTT-TGCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCA
644 GTGTGAGTTCT-CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* *
19065143 TCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCA
708 TCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCA
** * * *
19065208 GGTTCTCCGGTGATGCTCCGACGATGGGGCCTCGAC-AGAGAAAAATGCAGCACCAGCACATGCC
771 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGA-AGAAAAATGCGGCACCAGCACATGCC
* * *
19065272 CGAGCCCAGCATGTGCTGCAGACAACCCTCGG-CCTGATCTGATCTTAGACTGGGAATGAACTCC
835 CGAGCCCAGCATGTGCTGCCG-CAACCCTCGGTCC-GGTCCGATCTTAGACTGGGAATGAACTCC
19065336 GTATG
898 GTATG
19065341 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
19065406 CAGCCAGA-GGGCGGGATGCGGAAGCCGGGGATCGGTCGGGTCCACCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * ** *
19065470 TGCTGCCACAACCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGGCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* *
19065535 CCGACGGAACGAGCAAGTGGGCGGACGGGCGAATGGGCGGGCACTACGCCGGCCAGAGAGACGGG
196 CCGACGAAACGAGC----GGGCGGGCGGGC--A--GGCGGGCACTACGCCGGCCAGAGAGACGGG
* *
19065600 ATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
253 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGC
* *
19065665 CAATGTCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTAA
318 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCA
** *
19065730 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTAAGTTTCGGGATTTTTTA
382 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTA
* * ** * * * * *
19065795 AAATTTTTTTGGAAGGATTTTTCACCCAAAACTTGGTAGATGTGATACTTTTATTTTT-TTCAGC
447 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGC
* * *
19065859 ATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGATCGTTTGAAAAAAGTG
511 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* *
19065924 TCCCCATTTCAGACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAG
576 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
*
19065989 GGGGTGTGAGTTCTCGAGGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
641 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * * *
19066054 CATCGCACATCATGTGTGCACACCCCTCCCAGCCCCCCTGACCGTCGGAACCCTAATGCCGTCGG
706 CATCGCACATCATGTGCGCACA-CCC-CCCGGCCCCCC-GATCGCCGGAACCCCAATGCCGCCGG
* * * *
19066119 TCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCAACGAA-AAAAATACGGCACCAACACATG
768 TCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* * * *
19066183 CTCGAGCCCAACATGTGCTACCGCAA----C---CC--T-C-A----A-TCT--G-AT---CT--
833 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
19066224 G-AT-
898 GTATG
* * * *
19066227 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGCAGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * *
19066292 CGGCCAGAGGGGCGGGATGCATAAGCCGAGAATCGGTCGGGTCCCCCTCTTCGTGCTGCCTATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * * * * * **
19066357 TATTGCTGCAACCTTCTGTTCAGTCTGATCTTAGACTAGGAATGAACTTCGTATGCGAAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* * * *
19066422 TCGATGAAATGAGCGGGC-GGC---CAGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
19066483 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
*
19066548 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAATAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
19066613 GACTCGTTTTCTATTTTTCATGATTTTCCAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
391 GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
** * *
19066678 TTGAAGGCGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
456 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
19066743 AAAGTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
521 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
19066808 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAG
586 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
19066873 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
651 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
19066938 CATGTGCGCACACCCCCCTCGGCCCCCCCGATCACCGGAACCCCCAATGCC-AC-GTCAGG-T-T
716 CATGTGCGCACA-CCCCC-CGG-CCCCCCGATCGCCGGAA-CCCCAATGCCGCCGGTCAGGTTCT
** * *
19066999 CCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACTAGCACATGCCCGAGGCC
777 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* *
19067064 AGCATGTGCTGCCGCAGCCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATG
842 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
19067125 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA-CCACGAAATGAGCTTGCGGGCGCTCAGA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
19067189 CGGCCAGA-GGGCGGGATGCACAAGCCAAGGATC-GTCGGGTTCCCCTTCTACGTGCTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG-TCCCCCTCTGCGTGCTGCCGATC
* * * * * *
19067252 TTGCT-TCACAAACCTCAGT-TGGT-TCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCATATGCCTAAGCC
* * * *
19067314 AACCAACGAAACGAGCGGACGGGCGGGCAGGCGGGCGGGCACTATGTCGGCCAGAGAGACGGGAT
194 AACCGACGAAACGAGCGGGCGGGCGGGCA----GGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* *
19067379 GCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCA
255 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
* *
19067444 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAATCCTTCACATGAAGTTTCATGG
320 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* *
19067509 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTAAAA
385 CAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* * * * *
19067574 TTTTTTCGAAAGGAGTTTTGGCACCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCACGT
450 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
*
19067639 A-AAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
515 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
19067703 CATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGG
580 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
19067767 TGTGGGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
645 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * * *
19067832 GCGCATCACGTGCGAACACCCCCCGACTCCCCCGATCGCTGGAACCCCAATGCCTCCGGTCAGGT
710 GCACATCATGTGCGCACACCCCCCGGC-CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGT
* * * * *
19067897 TCTCCGACGATGCTCCGATGATGGTGCCCTGGCGAAGAAAAATGCAGCACCAGCACATGCTCGAG
774 TCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
** * *
19067962 CCCAGCATGTGCTGCAACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTAAG
839 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * ** * *
19068026 CTTAGACTGGGAATGAACT-CGTATGCCTAAGTCAACCAATGAAATGAGCACGCGGGCGCTTATC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * *
19068090 CGGCCAGAGGGGCGGGATACGCGAGCCGAGGATCGACCGGGTCCCCCACTACGTGCTAG--GAT-
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT-GCCGATC
* ** * * * * **
19068152 CTGGCTGCTGCAATGCTCGGTCCAGTCTAATCTTAGACTGGAAATGAACTCTATATGAATAAGCC
130 CT-GCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCC
* * * * * * * * *
19068217 GACCGATGAAACAACCTGGCGGGCGAGCGGGC-GGCACTACGTCGGCCAGAGAGACGGGATGCTC
194 AACCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* *
19068281 AAGCCGTGGATCGACAGGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTCTGCGTGCCAATGC
259 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
19068346 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
324 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* *
19068411 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTT
389 ACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
* * * * ** * * *
19068476 TTCAGAAGGATTTTTGGGCCTAAACTTATTAGACGTAATGCATG-ATTTTTGTTGGCATGCACAA
454 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
** * *
19068540 AAAAATTCTTCTAAAAACTC-AAGTGTATAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATT
519 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
19068604 TCAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTT
584 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * * * *
19068669 ATTTCTTGAGGTTTGATAAGGGAGAGGGGGCCAATATAAGGGCCAAGTACTAGCGCCCATCGCAC
649 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
19068734 ATCATGTGCGCACACCCTCCCGGCCCCCTCGATCGCC-GAAACCCAATGCCGTCGGTCAGGTTCT
714 ATCATGTGCGCACACCC-CCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
* **
19068798 CC-AGGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCC
777 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * *
19068862 AGCA--TGCTGTCGTAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
842 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
19068921 C-----C------T-AA----G--T--C---G---ACCCACGAAATGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
19068960 CGGCCACAGAGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
19069025 TGCTGCCACAAACCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* * ** ** *
19069090 CAGACGAAATGAGCGGGCGGGC--G--GGCGGTTACTACGCCGGTGAGAGAGACGAGATGCGCAA
196 CCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
19069151 GCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTTTGCATGCCAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * *
19069216 TTTTTATGGCTTGTAAATTCATACAATGGCCCCTTAAACCTTCACATGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * ** *
19069281 TACTCATTTTCTATTTTTCTTGATTTTCAAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTTT
391 GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * * * * *
19069346 CGGAAAGATTTTTGGCACCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCACGCAAAAAA
456 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
19069411 AAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
521 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
19069476 AAACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG-GTGGG
586 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
19069540 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
651 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
19069605 CACGTGC-CAACACCCCCC-G-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCG
716 CATGTGCGC-ACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
** ** * * * * *
19069667 ACGATGCTCCGGTGATGGTGCCTTGGCGAAGAAAAATGCAGCACCAGCAGATGCCCGAGCCGAGT
780 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * *
19069732 ATGTGCTGCAGCAACCCTCAGCCCGGTCCGATCTTAGATTGGGAATGAATTCCGTAAG
845 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
19069790 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
19069855 CGGCCAGAGGGGCGGGATGCGCGAGCCGCGGATCGATCGGGTCCCCCT-TGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
19069919 TACTGCTGCAACCCTTGGTCCGGTCTGATCTTAGACCGGGAATGAACTCTATATGCTTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* ** * * * *
19069984 CTGACGAAACGAGAAGACGGGCGGGCAGGCGAGCACTACGCCGGCCAGAGAGACGGTATGCACAA
196 CCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
19070049 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCTA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
** *
19070114 TTTTTATGGCTTGTAAATTCATACAATGACCCCTTCAGCCTTCACGTGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * *
19070179 GACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTGCAGTTCAGGATTTTTTAAAATTTTTT
391 GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* *** * * * *
19070244 CAGAAGGAGTTTTGGCTATAACCTTGGTAGACATGATTCTTGTATTTTT-TTGGCATGCAAAAAA
456 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
19070308 AAATTCGGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCGTTTA
521 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
19070372 AGACACTTTAATAGCTACTGGTAGCAAACCTGTAAAATCTCCAATGCTCTTTAAGGGGGTGTGAG
586 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
19070437 TTCTCGAGGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
651 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
19070502 CATGTGCGAACACCCCCCCGACCACCCCGGATCGTCGGAACCCCAATGTCGCCGGTCAGG-T-T-
716 CATGTGCGCACA-CCCCCCGGCC-CCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
** *
19070564 ---C--T-CT--GACGATGGTAG-CCCGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCC
778 CGACGATGCTCCGACGATGGT-GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * *
19070620 AGCATGTGCTGCCGCAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATG
842 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
19070681 CTTAGATTGGCAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGACCGTGCGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
19070746 CGGCCAGAGGGGTGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCTTTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
19070811 TTCTACCGCAACCCTCAGTCTC-ATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTC-CGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
* * * * *
19070875 ACCGACGAAACGAACAGGCGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATACGCA
195 ACCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* **
19070940 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGGACATCTTCATATTTCTGTTTGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
19071005 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
** *
19071070 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
390 CGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
**
19071135 TCGGAAAAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
455 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
19071200 AACATTCAGCT-AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAGAGTGTCCCCATTT
520 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
19071264 CAGACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAATCTCCAATGCTCTTTAAGGGGGTGTGA
585 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
19071329 GTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATGTAAGGGCCAAGTACCAGCACCCATCGCACA
650 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
19071394 TCATGTGCGCAAACCCCCCCGGCCCCTCGATCGCCGGAACCACAATGGCGCTGGTCAGGTTCTTC
715 TCATGTGCGCACA-CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * * *
19071459 GATGATGCTCCGATGATGGTGCCTCGACGAAGAATAATGCGGCACCAGCACATGCTCGAGCCCAA
779 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* *
19071524 CATGTGCTGCCACAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAAC-CTCGTATG
844 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC-CGTATG
* * * * *
19071583 CTTAGATTGGGAATAAACTCCGTATGCCTAAGTCAACCCAC-AGAACGAGCATGTGGGCACTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA-AACGAGCGTGCGGGCGCTCAG
* * ** * * * * * *
19071647 CC--CCAGAAGGGC-GGATGC-AAAATC-GGGATCAGCCTGGTCACCCTCTACGTGCTGTCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * *
19071707 CTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
* * *
19071772 ACCGACGAAATGA----GCGGGCGGGCAGGCCGGCACTACGCCGGCCAGAGAGACGGGATGTGCA
195 ACCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
19071833 AGCCGTTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
19071898 ATTTTTATAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * *
19071963 CGACTCGTTTTCTATTTTTCACGATCTTCGAAACTTTTTGTGGTTCGGGATTTTTTAAGATTTT
390 CGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
19072027 GTGACCATTT
Statistics
Matches: 8240, Mismatches: 968, Indels: 375
0.86 0.10 0.04
Matches are distributed among these distances:
865 7 0.00
866 30 0.00
867 58 0.01
868 240 0.03
869 159 0.02
870 171 0.02
871 99 0.01
872 43 0.01
873 9 0.00
874 338 0.04
875 165 0.02
876 2 0.00
877 1 0.00
878 1 0.00
879 3 0.00
880 2 0.00
881 3 0.00
882 3 0.00
883 7 0.00
884 1 0.00
885 1 0.00
886 68 0.01
887 111 0.01
888 3 0.00
889 1 0.00
890 4 0.00
891 259 0.03
892 1029 0.12
893 423 0.05
894 142 0.02
895 137 0.02
896 120 0.01
897 445 0.05
898 688 0.08
899 33 0.00
900 113 0.01
901 601 0.07
902 1035 0.13
903 318 0.04
904 467 0.06
905 260 0.03
906 53 0.01
907 1 0.00
908 3 0.00
910 155 0.02
911 22 0.00
912 25 0.00
913 319 0.04
914 61 0.01
915 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (902 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
CATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:19064442 original size:27 final size:27
Alignment explanation
Indices: 19064412--19064465 Score: 81
Period size: 27 Copynumber: 2.0 Consensus size: 27
19064402 GGTCCGATCA
*
19064412 TAGACTGGGAACGAACTCCGTATGCCT
1 TAGACTAGGAACGAACTCCGTATGCCT
* *
19064439 TAGACTATGAATGAACTCCGTATGCCT
1 TAGACTAGGAACGAACTCCGTATGCCT
19064466 AATCAACCCA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.28, C:0.24, G:0.22, T:0.26
Consensus pattern (27 bp):
TAGACTAGGAACGAACTCCGTATGCCT
Found at i:19065344 original size:26 final size:26
Alignment explanation
Indices: 19065315--19065367 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19065305 CTGATCTGAT
19065315 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19065341 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19065367 C
1 C
19065368 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19067135 original size:26 final size:26
Alignment explanation
Indices: 19067099--19067151 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19067089 CCGGTCCGAT
*
19067099 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19067125 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19067151 C
1 C
19067152 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19069793 original size:26 final size:26
Alignment explanation
Indices: 19069764--19069813 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
19069754 CCGGTCCGAT
* *
19069764 CTTAGATTGGGAATGAATTCCGTAAG
1 CTTAGACTGGGAATGAACTCCGTAAG
19069790 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
19069814 TGCCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.16, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTAAG
Found at i:19070699 original size:26 final size:26
Alignment explanation
Indices: 19070655--19070707 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19070645 CCGGTCCAAT
* * *
19070655 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGCAATAAACTCCGTATG
*
19070681 CTTAGATTGGCAATAAACTCCGTATG
1 CTTAGACTGGCAATAAACTCCGTATG
19070707 C
1 C
19070708 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGCAATAAACTCCGTATG
Found at i:19071593 original size:26 final size:26
Alignment explanation
Indices: 19071557--19071609 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
19071547 CCGGTTCGAT
*
19071557 CTTAGACTGGGAATGAAC-CTCGTATG
1 CTTAGACTGGGAATAAACTC-CGTATG
*
19071583 CTTAGATTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
19071609 C
1 C
19071610 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:19072378 original size:26 final size:26
Alignment explanation
Indices: 19072349--19072401 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19072339 CCGGTCCGAT
*
19072349 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
19072375 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
19072401 C
1 C
19072402 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:19073277 original size:26 final size:26
Alignment explanation
Indices: 19073248--19073300 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
19073238 CTAGTCCGAT
19073248 CTTAGACT-GGCAATGAACTCCGTATG
1 CTTAGACTAGG-AATGAACTCCGTATG
*
19073274 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
19073300 C
1 C
19073301 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:19073824 original size:899 final size:899
Alignment explanation
Indices: 19072019--19083222 Score: 14260
Period size: 902 Copynumber: 12.6 Consensus size: 899
19072009 GGGATTTTTT
19072019 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
19072084 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGCG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
19072149 ACCAATATAAGGGCCAAGTACCAGCGCCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
* * * * ** *
19072214 GATCGTCAGAACCCCAATGTC-GTCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCTTGG
196 GATCGTCGGAACCCCAATG-CAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* * ** * * *
19072278 CGAAGAAAAATGCGACACTAGCACATGCTGGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGG
260 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGG
* *
19072343 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGT
325 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
19072408 CAACCCATGAAACGACCGTGCGGGCGCTCAACCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGAT
390 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * * ** *
19072473 CGGTCGGGTCCGCTTCTACGTGCTACCGATCCTGCTGTCGCAACCCTCAGTCCAATCCGATCTTA
455 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTA
* * * * ** *
19072538 GACTGGGAATGAACTCCATATGCCTAAGCCAATCGACAAAACGAACGGATGGGCGGGCGGCCACT
520 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACT
* * * * *
19072603 ACGCCGGCCAAAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGCTAGTTGTGTTTAGGCAC
585 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * * *
19072668 ATCTTCATATTTTTGCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGTCCCTTTA
650 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * * *
19072733 TCCTTCACATGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCGAAACTTTT
715 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
** * * *
19072798 TGTGGATCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAATCTTGGTAGACGTGAT
780 TACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
*
19072863 CCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGCTAAAAACGT-GAAGTGTAC
845 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC-TCGAAGTGTAC
* *
19072918 AAGATTTTGTGACCAATTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCAACTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
19072983 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGATTGATGAGGGATAGGGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * *
19073048 GCCAATATAAGGGCCAAGTACCACCACCCATCACACATCATGAGTGCACACCCCCCGGCCCCCCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
*
19073113 GATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCCCGAC
196 GATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
* * * *
19073178 GAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTACCACAACCCTCGGTCTAGT
261 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * *
19073243 CCGATCTTAGACTGGCAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGTC
326 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* *
19073308 AACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
391 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * *
19073373 GGTCAGGTCCCCTTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAG
456 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAG
* * * *
19073438 ACTGGGAATGAACTCCATATGCGTAAGCCAACCGACAAAACGAGCGGGCGGGCGGGCGGCCACTA
521 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTA
* *
19073503 TGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGTGTTTAGGCACA
586 CGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* * *
19073568 TCTTCATATTTTTGCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAT
651 TCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
*
19073633 CCTTCA-GATGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTT
716 CCTTCACG-TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
** * * **
19073697 TGTGGTTCGAGATTTTTTAAAAATTTTTTCAGAAGGGGTTTTGAACCCAAACTTGGTAGAACGTG
780 TACGGTTCGAGATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG-ACGTG
* *
19073762 ATCCTTGTATTTTT-TTGGCATGCACAAAAAAATTTAGCTAAAAACTCAAAGTGTAC
843 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* *
19073818 -AGATTTTGTGACCATTTGAAAAGAGTGTCCCCCATTTCAAACACTTTAATGGCTACTGGCAGCA
1 AAGATTTTGTGACCATTTGAAAAAAGTGT-CCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * *
19073882 ACCCTGTAAAATCT-ACATGCTCTTTAA-GGGGTGTGGGTTCTCAAGGTTTGATGAGGGATAGGG
65 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
19073945 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCACGTGCGAACACCCCCCGGCTCCCC
130 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* * ** * *
19074010 CGATCG-CTGGAACCCCAATGCCGTCGGTCAGGTTCTTTGGCGATGCTCCGACGATGGTGCCCTG
195 CGATCGTC-GGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
* * * *
19074074 GCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCAGCAACCCTCGGTCCG
259 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTG
* *
19074139 GTCCGATCTTAGACTGGGAATGAACTCCATAAGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
324 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
19074204 TTAACCCACGAAACAAGTGTGCGGGCGCTCAGCCGGCCGGAGGGGCGGGATGCGCAAGCTGGGGA
389 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * ** * * * **
19074269 TCGATCGGGTCCCCCACTACGTGCTACTAATCCTGCTGCCGCAACACTCAGTCCAGTCCAATCTT
454 TCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTT
* * ** * * *
19074334 AGATTGGGAATGAACTCCATATGAATAAGTCGACCGACGAAACGACCTGGCGGGCGGGCGGGCAG
519 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGCGGGCGG
* *
19074399 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCCATAGGGTGGTAGGTGGGTTTA
580 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
19074464 GGCACATCTTCATATTTCTACGTGCCAATGCCAATTTTATGGCTGGTAAATTCATACAATGGTCC
645 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * ** **
19074529 CATAAGCCTTCACATGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCGTGATTTTCAAAA
710 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * * *
19074594 CTTTTTACGGTTTGGGATTTTTTAAAA-TTTTTCAGAAGAATTTTTGGCCCCAAACTTGGTAGAC
775 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
*
19074658 ATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
840 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* *
19074718 AAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTAGTAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
19074782 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGATTTCTTGAGGTTTGATGAGGGATAAGGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
** * * *
19074847 GCCAATATAAGGGTGAAGTACTAACACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCTC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC
** * * * * *
19074912 CGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACAATGCTCCGACGGTGTTGCCCCGG
195 CGATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* * * * * * *
19074977 TGAAGAAAAATGTGACACCAACACATGCCCGAGCCCAGCATGTGCTGCTGCAATCCTTCGGTC-A
260 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CCCTCGGTCTG
* * * *
19075041 CTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTTGACTGGGAATGAACTTCGTATGCCTAAG
324 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * *
19075106 TCAACACATGAAATGAGCGTGCAGGCGCTCAGTCGGCCAGATGGGCGGGATGTGCAAGCCGGGGA
389 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * * * *
19075171 TCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTGCCACAACCCTCGGTCTGGTCCGATCCT
454 TCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTT
* * * *
19075236 AGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAATAAGCAGGCGGGCGAGCGGGCGG
519 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA-ACG-A-GCGGGCGGGCGGGCGG
*
19075301 GCACTACGCCGGCCAGAAAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
580 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
19075366 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
645 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* **
19075431 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAATTTCAAAA
710 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * * *
19075496 CTTTTTGCGGTTCGATATTTTTTGAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTCGTAGAC
775 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
19075561 ATGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
840 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
19075621 AAGATTTTGTGACGATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGAAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
19075686 ACCTGTAAAATCTCGAAA-GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
66 ACCTGTAAAATCTC-AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
19075750 GGCCAATATAAAGGCCAAGCACCAG-ATCCCATTGCACATCATGTGCGCACACCCCCCGGCCCCC
130 GGCCAATATAAGGGCCAAGTACCAGCA-CCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
* * *
19075814 CCGATCGCCGGAACCCCAATGCTGTCGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCCG
194 CCGATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
* * * * * * * * * *
19075868 ATGAAGAAAAATACGTCACCAACACATGCCTGAGCCCAGAATGTGTTGCTGCAACCCTTGGTCCG
259 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTG
* * **
19075933 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAGACTGGGAATGAACTCCATATTACTAAG
324 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * *
19075998 TCAACACAAGAAATGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGAGGGATACACAAGCTGGGGA
389 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
** * * * *
19076063 TCGACCGGGTCCCCCTCTGTGTGCTGCCGATCCTACTGCCACAACCCTCGGTCTGGTCTGATCTT
454 TCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTT
* * * *
19076128 AGACT-GGAATGAACTCCGTACGCCTAAGCCAACCAACGAAACGA--------GCGTGCGAGCAC
519 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCAC
* * *
19076184 TATGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCA
584 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* * * *
19076249 CATCTTCATATTTCTGCATGCCGATGCCATTTTTGTGGCTTCTAAATTCATACAATGGTCCCTTA
649 CATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* ** **
19076314 AGCTTTCACGTGAAGTTTCATGGCAAGTTGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTT
714 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
* *
19076379 TTGA-GGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAATTTTGGCCCCAAACTTGGTAGACGTG
779 TT-ACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* * *
19076443 ATCCTTATATTTTTTTTGGCATGCATAAAAAAATTCAGCT---AA----AA----AC
843 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
19076489 ---------T---C--------AAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * * ** *
19076534 ACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGACTTCTCGAAGCTTGATGAGGGCCAGAGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * *
19076599 GCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCTCCAGCCGCTC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGGCCCCCC
** *
19076664 CGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA---T--G--G-T--T----CGA
195 CGATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* * * * * *
19076715 CGATG----GTGC--C-CCA--AC---CCCGAGCCCAGCATGTGCGGTCGTAACCCTTGGT-TCG
260 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-G
* * * * *
19076767 GTCCAATGTTAGACTGGGAATGAAATCCGTATGCTTCGACTAGGAATGAACT-CGTATGCCTAAG
324 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
19076831 TCAACTCACGAAACAAGCGTGCAGGCGCTCAGCCGGCCAGATGGACGGGATGCGCAAGCCGGGGA
389 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * * * * *
19076896 TCGGCCGGGTCGCCCTTTGCGTGTTGCCGATCCTGTTGTCGCAACCCTCGGTCTGATCTGATCTT
454 TCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTT
* *
19076961 AGACTGGGAATGAACTCC-TATGCCTAAGCCAATCAACGAAACGA----GCGGGCGGGCGGGCAC
519 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCAC
**
19077021 TACGCCGGCCAGAGAGAC-GGATGCGCAAGCCGTGGATC-ATTAGGGTGGTAGGTGCATTTAGGC
584 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA-TAGGGTGGTAGGTGGGTTTAGGC
* *
19077084 ACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTT
648 ACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
19077149 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
713 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
* * *
19077214 TTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTCGGCCCCAAACTTGGTAGACGTG
778 TTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* * *
19077279 ATTCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAGCTCGAAGTGTAC
843 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * * *
19077336 AAGATTTTGTGAACATTTGAAAAAATTGTCTTCAATTT-AGACACTTTAATGGCTACTGGCAGCA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTC-CCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
19077400 AACTTGTAAAATCTCAAATGCTCTTTAAGGGGGCGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
65 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
** * * * *
19077465 GGATATTATACGGGCTAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCCCGG-CCCC
130 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCC
** * * *
19077529 TTGATCGTCGGAACCCTAATGTC-GCAGGTCAGGTTCTCAGACGATGCTCCGACGATGGTGCCCC
194 CCGATCGTCGGAACCCCAATG-CAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCC
* ** * * * *
19077593 GACGAAGAAAAATGCAGCACCAGCACATGCCTAAACCCAGCAAGTGCTGTCGCAACCCTCGGTCC
258 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT
* * * * *
19077658 GATCCGATCTTCGACTGAGAATGAACTCCATATGCTTAGCCTGGGAATGAACTCCGTATGCCTAA
323 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * ** *
19077723 GTCAACCCATGAAACAAGCGTGCGGGCGCTCAGCCGACCAAAGGGGCAAGATGCGCAAGCCGAGG
388 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* ** * * * **
19077788 ATCGATCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCGCAACCCTCAGTCTGATCCCATCT
453 ATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCT
** * * *
19077853 TAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCGATAAAATGAGCGGGCGGGCGGGCAGACA
518 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCA
* * *
19077917 CTACTCTGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
583 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *
19077982 ACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCTTGTAAATTCATACAATGGTCCTTT
648 ACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* * * * * **
19078047 AAGCCTCCACGTGAAGTTTCATGGCAAGATGACTCATTTTTTATTTTACGTGATTTTTGAAACTT
713 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
** * * * *
19078112 TTTGGGGTTCGAGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCTAAACTTGGCAGACGTG
778 TTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
19078177 ATCCTTTTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
843 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
19078234 ACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * * *
19078299 ACATGTAAAATCTCAAATGCTCTTTCAGGAGGTGTGAGTTCTCAAGGTTTGATGAGGGATA-GAG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
*
19078363 GCCAATATATGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
* * * *
19078428 GATCGTCGGAACCCCAATGCCA-CTGGTCAGGTTCT---TCG--G----GA--ATGATGCCCCGG
196 GATCGTCGGAACCCCAATG-CAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* * * *
19078481 TGAAGAAAAATGCAGCACCAGCACATGCCTGAGCCCAGCATGTGCTTCCGCAACCCTCGGTCTGG
260 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGG
* ** *
19078546 TCTGATCTTAGACTGGGAATGAACTTTGTA-GCTTAGACTGGGAATGAACT-CGTATGCCTAGGT
325 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * *
19078609 CAACCCACGAAACGAGCATGCGAGCTCTCAGTCGGCCAGA-----GGGATGCGCAAGTCGGAGAT
390 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * *
19078669 CGGTCGGGTCCCCCTCTGCATGCTGCCGATCTTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTA
455 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTA
* * *
19078734 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGTGGGCGGACGGGCGGGCACT
520 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACT
** * ***
19078799 ACGCCGGCCAGAGAGATAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGCGTTTAATAAC
585 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* *
19078864 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGTCTTGTAAATTCATACAATGGTCCCTTAA
650 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * * *
19078929 GACTTCACGTGAAGTTTAATGGCAAGACGACTCGTTTTTTATTTTTTACGATTTTGGAAACTTTT
715 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* * * *
19078994 TGCAGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
780 TACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
*
19079059 CCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAGGTGTAC
845 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
19079113 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * **
19079178 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCGAGGCTTGATGAGGGCCAGGGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
19079243 GCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCACCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC
* ** * * **
19079308 TGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCT-CGACGATGGTCCGGTGATGGTGCCCCGA
195 CGATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* *
19079372 CGAAGAAAAATGCGGCACCAGCACATGCCCGA-CCCAGCATGTGCTACCGCAACCCTCAGTCTGG
260 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGG
* *
19079436 TTCGATCTTAGACT-GGAATGAACTTCGTATGC-----CT----A-G------G--TG----A-T
325 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * ** * ** *
19079477 ---CCCACTAAACGAGCGTACGGGCATTCAGCCGGCCAGAGGGGTGGGATGCATAAGCCGAGGAT
390 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * **
19079539 CGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTCGATCTAGTCTGATCTTA
455 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTA
* * *
19079604 GACTGCGAATGAACTCCGTATGCCTAAGCCAACTGACGAATTGAACGGGCGGGCGGGCGGGCGGG
520 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-A---AACGAGCGGGCGGGCGGGCGGG
* * *
19079669 CACTACGTCGGCTAGAGGGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
581 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
19079734 GCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTACC
646 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
19079799 TTAGGCCTTCACGTGAAGTTTCATGGCAAGAC-AGCTCGTTTTCTATTTTTCATGATTTTTGAAA
711 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-CTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * * **
19079863 TTTTTTACGGTTCGAGATTTTTTTAAATTTTTTCGGAAGCATTTTTTACCCCAAACTTGGTAGAC
775 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
19079928 GTGATCCTTGTA-TTTTCTTGGCATGCACAAAATAATTCAGCTAAAAACTCGAAGTGTAC
840 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
19079987 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
19080052 ACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTTTTCGAGGTTTGATGAGGGATAGAGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
19080117 GCCAATCTAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCACCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
* * * * * *
19080182 GATTGTTGAAACCCCAAT---GCC-GTC--G--AT-C-A-GGTTCTCCGACGATGGTGCCCCGAC
196 GATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
* * *** ** * *
19080236 GAAGAAAAATGCAGCCCCAGCACATG-CCGAGCCCAGCATCCACTTTCGCGACCCTCAGT-TCGG
261 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GG
* **
19080299 TCTGATCTTAGACTGGGAATGAACTCC-TATGCTTAGACTACGAATGAACTCCGTATGCCTAAGT
325 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * ** * * * * * *
19080363 TAACCCACGAAACAAGCGTGTAGGCACTTAGCCGGACAGAGGGGTGGGATGCGTAAGCCGAGGAT
390 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * * *
19080428 AGATCAGGTCCCCCTCTGCATGCTGCCGATCCTGCTACCGCAACCCTTGGTCAGGTCTGATCTTA
455 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTA
* * * *
19080493 GACTGGGAATGAACTCCATATGCCTAAGCTAACCGACGAAATGAGGGGGCGGGCGGGCGCGTGGG
520 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-GG-GC--GGG
** * * *
19080558 CACTACGCCGGCCAGAGAGATAGGATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGAGTTTAG
581 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
*
19080623 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
646 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
*
19080688 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
711 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
* * ****
19080753 TTTTTACGGTTTGAGATTTTTTTAAATTTTTTCGGAAATCCTTTTTTGGCCCCAAACTTGGTAGA
776 TTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGG-AA-GGAGTTTTGGCCCCAAACTTGGTAGA
* * *
19080818 CGCGATCCTTGTGTTTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTAC
839 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
19080879 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
19080944 ACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
19081009 GCCAATATAAGGGCAAAGTACCAGCTCCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC
* *
19081073 CGATCGTCGGAACCCCAATTTC-GTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
195 CGATCGTCGGAACCCCAA-TGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
* ** * *
19081137 ATGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCTG
259 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTG
* *
19081202 GTCCGATCTTAGACAGGGAATGAACTCCGTATGCTTACACTGGGAATGAACTCCGTATGCCTAAG
324 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
*
19081267 TCAACCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
389 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* ** ** * * * * * * * **
19081332 TCGGCCCAGTCCAACTCTACGTACTGCTGATCCTGTTGCCACAACCATCGATCCGGTCCAATCTT
454 TCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTT
* * * * *
19081397 AGACAGCGAATGAACTCTGTATGCCTAAGCCAACTGACGAAACAAGCGGGCGGGCGGCCGGGCGG
519 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC--G-GG-CGGGCGG
*
19081462 GCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
580 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
19081527 GGCACATCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACCATGGTCC
645 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
19081592 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCG-----TA-TTTT---GA------AAA
710 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * *
19081642 CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGTAGAC
775 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
19081707 GTAATCCTTGTATTTTTGTTGGCATGCA-AAAAAGAATTCAGCTAAAAATTCGAAGTGTAC
840 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTGTAC
*
19081767 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
19081832 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTACTCGAAGTTTGATGAGGGATAGGGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
19081897 GCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCTCACCCCCTCCCGGCCCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCC-CCCGGCCCC
* * * *
19081962 CCCGATCGCCGGAACCCCATTGCCA-CCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
193 CCCGATCGTCGGAACCCCAATG-CAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCC
* ** * **
19082026 TGGTGAAG-AAAATGTGGCTGCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
257 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * * *
19082090 TGGTCTGATCTTAGTCTGGGAATGAACTCCGTATGCTTAGACTTGGAATGAACTCCATATCCCTA
322 TGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * ** * *
19082155 TGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGAATGCATAAGCTGAG
387 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
** * * ** * ** * * *
19082220 GATCGACCGTGTCCCCCTCTGTGTGCTGTTGATCCTACTATCGCAACCCTTGGTCCGATCCGATC
452 GATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * ** * **
19082285 TTAGATTGGGAATGAACTCTGTATGCCTAAGAAAACTGACGAAACGAGCGGATGGGCGGGCGGGC
517 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC
* * * * *
19082350 ACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCTTTGATCGATAGGGTGATAGGTGAGTTTAGG
582 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* *
19082415 CACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGCTCCCT
647 CACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* **
19082480 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTTTTCACGATTTTCAAAACT
712 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT
* * * *
19082545 TTTTACGGTTCGGGATTTTTTAATATTTTTTTGGAAGTAGTTTTGGCCCCAAACTTGGTAGACGT
777 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
*
19082610 AATCCTTGTATTTTTGTTGGCATGCA-AAACAAAATTCAGCTAAAAACTCGAAGTGTAC
842 GATCCTTGTATTTTTGTTGGCATGCACAAA-AAAATTCAGCTAAAAACTCGAAGTGTAC
*
19082668 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACGCTTTAATGGCTACTGGCAGCAA
1 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
19082733 ACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAGTACTCGAAGTTTGGTGAGGGATAGGGG
66 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
*
19082798 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCTCACCCCCTCCCGGCCCC
131 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCC-CCCGGCCCC
* * *
19082863 CCCGATCGTCGAAACCCCAATGCCA-CCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
193 CCCGATCGTCGGAACCCCAATG-CAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCC
* * * * * * * *
19082927 CGATGAAGAAAAATGTGGCTCTAGCACATGCTCGTGCCCAGCATGTGCTGTCGTAACCCTCGGTC
257 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * * *
19082992 TGGTCTGATCTTAGTCTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTTCGTATGCCCA
322 TGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
19083057 AATCAACCCGCGAAACGACCGTGCAGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCTGGG
387 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * *
19083122 GATCGGTCGGGTCCCCCTCTACGTGCTGCCGATGCTGCTACCGCAACCCTCGGTCCGTTCTAATC
452 GATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * *
19083187 TTACACTAGGAATGAACTCCGTATGCCTAAGACAAC
517 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
19083223 ACATGCCCGA
Statistics
Matches: 9046, Mismatches: 1036, Indels: 443
0.86 0.10 0.04
Matches are distributed among these distances:
833 146 0.02
834 86 0.01
835 2 0.00
836 254 0.03
837 29 0.00
839 4 0.00
840 1 0.00
842 2 0.00
843 2 0.00
846 6 0.00
847 5 0.00
848 144 0.02
849 41 0.00
850 2 0.00
852 2 0.00
853 1 0.00
854 1 0.00
856 1 0.00
859 2 0.00
862 5 0.00
863 85 0.01
864 12 0.00
865 32 0.00
866 37 0.00
867 137 0.02
868 14 0.00
869 4 0.00
870 109 0.01
871 2 0.00
872 3 0.00
873 45 0.00
874 457 0.05
875 1 0.00
876 3 0.00
879 504 0.06
880 367 0.04
881 45 0.00
883 2 0.00
884 47 0.01
885 35 0.00
886 260 0.03
887 12 0.00
888 244 0.03
889 382 0.04
890 351 0.04
891 174 0.02
892 555 0.06
893 156 0.02
894 2 0.00
895 4 0.00
896 13 0.00
897 118 0.01
898 803 0.09
899 842 0.09
900 205 0.02
901 504 0.06
902 987 0.11
903 223 0.02
904 185 0.02
905 341 0.04
907 3 0.00
908 4 0.00
909 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (899 bp):
AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
GATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAG
ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTA
CGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
TCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
ACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
Found at i:19080343 original size:25 final size:26
Alignment explanation
Indices: 19080305--19080356 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
19080295 TCGGTCTGAT
**
19080305 CTTAGACTGGGAATGAACTCC-TATG
1 CTTAGACTACGAATGAACTCCGTATG
19080330 CTTAGACTACGAATGAACTCCGTATG
1 CTTAGACTACGAATGAACTCCGTATG
19080356 C
1 C
19080357 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 19 0.79
26 5 0.21
ACGTcount: A:0.29, C:0.23, G:0.21, T:0.27
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCGTATG
Found at i:19081238 original size:26 final size:26
Alignment explanation
Indices: 19081209--19081261 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19081199 CTGGTCCGAT
*
19081209 CTTAGACAGGGAATGAACTCCGTATG
1 CTTACACAGGGAATGAACTCCGTATG
*
19081235 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACAGGGAATGAACTCCGTATG
19081261 C
1 C
19081262 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTACACAGGGAATGAACTCCGTATG
Found at i:19082742 original size:901 final size:901
Alignment explanation
Indices: 19076491--19083222 Score: 8516
Period size: 874 Copynumber: 7.6 Consensus size: 901
19076481 CTAAAAACTC
*
19076491 AAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
1 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * ** *
19076556 TTTAAAGGGGTGTGACTTCTCGAAGCTTGATGAGGGCCAGAGGGCCAATATAAGGGCCAAGTACC
66 TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * * * **
19076621 AGCACCCATCGTACATCATGTGCGCACA-CCCCTCCAGCCGCTCCGATCACCGGAACCCCAATGC
131 AGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGC
**
19076685 CGCCGGTCAGGTTCTCCGACGA---T--G--G-T--T-CGACGATG--G-----TGC--C-CCA-
196 CGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAG
* * * * ** *
19076728 -AC---CCCGAGCCCAGCATGTGCGGTCGTAACCCTTGGT-TCGGTCCAATGTTAGACTGGGAAT
261 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAAT
* * * * *
19076788 GAAATCCGTATGCTTCGACTAGGAATGAACT-CGTATGCCTAAGTCAACTCACGAAACAAGCGTG
325 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
19076852 CAGGCGCTCAGCCGGCCAGATGGACGGGATGCGCAAGCCGGGGATCGGCCGGGTCGCCCTTTGCG
390 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCG
* * * *
19076917 TGTTGCCGATCCTGTTGTCGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCC-TA
455 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTA
*
19076981 TGCCTAAGCCAA-TCAACGAAACGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-G
520 TGCCTAAGCCAACT-GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACAG
* *
19077040 GATGCGCAAGCCGTGGATC-ATTAGGGTGGTAGGTGCA-TTTAGGCACATCTTCATATTTCTACG
584 GATGCGCAAGCCGTGGATCGA-TAGGGTGGTAGGTG-AGTTTAGGCACATCTTCATATTTCTGCA
*
19077103 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTT
647 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
19077168 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
712 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
* * *
19077233 TAAAATTTTTTTGGAAGGAGTTTCGGCCCCAAACTTGGTAGACGTGATTCTTGTATTTTTTTTGG
777 TAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* *
19077298 CATGCACAAAAAAATTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGAACATTTGAAA
842 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* * * *
19077358 AAATTGTCTTCAATTT-AGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCT
1 AAAGTGTC-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * ** * * *
19077422 CTTTAAGGGGGCGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGATATTATACGGGCTAAGTAC
65 CTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* ** *
19077487 CAGCACCCATCGCACATCATGTGCGTACA-CCCCCCCGG-CCCCTTGATCGTCGGAACCCTAATG
130 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * * * *
19077550 TCGCAGGTCAGGTTCTCAGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACCA
195 CCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCA
** * * * * * * * *
19077615 GCACATGCCTAAACCCAGCAAGTGCTGTCGCAACCCTCGGTCCGATCCGATCTTCGACTGAGAAT
260 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
* * * *
19077680 GAACTCCATATGCTTAGCCTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTG
325 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * ** **
19077745 CGGGCGCTCAGCCGACCAAAGGGGCAAGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCG
390 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCG
** * * **
19077810 TGCTATCGATCCTGCTGCCGCAACCCTCAGTCTGATCCCATCTTAGACT-GGAATGAACTCCGTA
455 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTA
* ** * * * * *
19077874 TGCCTAAGCCAACCGATAAAATGAGCGGGCGGGCGGGCAGACACTACTCTGGCCAGAGAGACAGG
520 TGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACAGG
*
19077939 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
585 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCATGC
* * *
19078004 CAATGCCATTTTCATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTCCACGTGAAGTTTCAT
650 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * ** ** *
19078069 GGCAAGATGACTCATTTTTTATTTTACGTGATTTTTGAAACTTTTTGGGGTTCGAGATTTTTTAA
715 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * * * *
19078134 AATTTTTTTGAAAGGAGTTTTGGCCCTAAACTTGGCAGACGTGATCCTTTTATTTTTTTTGGCAT
780 AATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
*
19078199 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACACGATTTTGTGACCATTTGAAA
845 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
*
19078256 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACATGTAAAATCTCAAATGCTC
1 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * *
19078321 TTTCAGGAGGTGTGAGTTCTC-AAGGTTTGATGAGGGATA-GAGGCCAATATATGGGCCAAGTAC
66 TTTAAGGGGGTGTGAGTTCTCGAA-GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
19078384 CAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
130 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * * * * *
19078447 CCACTGGTCAGGTTCT---TCG--G----GA--ATGATGCCCCGGTGAAGAAAAATGCAGCACCA
195 CCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCA
* *
19078501 GCACATGCCTGAGCCCAGCATGTGCTTCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
260 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
** * *
19078566 GAACTTTGTA-GCTTAGACTGGGAATGAACT-CGTATGCCTAGGTCAACCCACGAAACGAGCATG
325 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * *
19078629 CGAGCTCTCAGTCGGCCAGA-----GGGATGCGCAAGTCG-GAGATCGGTCGGGTCCCCCTCTGC
390 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAG-GATCGGCCGGGTCCCCCTCTGC
* * * *
19078688 ATGCTGCCGATCTTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
454 GTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGT
* * * * *
19078753 ATGCCTAAGTCAACCGACGAAACGAGTGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGATAG
519 ATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACAG
* ***
19078818 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGCGTTTAATAACATCTTCATATTTCTGCATG
584 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCATG
* * *
19078883 CCAATGCCATTTTTATGTCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTAA
649 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * * * *
19078948 TGGCAAGACGACTCGTTTTTTATTTTTTACGATTTTGGAAACTTTTTGCAGTTCGGGATTTTTTA
714 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* *
19079013 AAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
779 AAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
19079078 TGCAC-AAAAAATTCAGCTAAAAACTCGAGGTGTACAAGATTTTGTGACCATTTGAAA
844 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
*
19079135 AAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
1 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * **
19079200 TTTAAGGGGGTGTGACTTCTCGAGGCTTGATGAGGGCCAGGGGGCCAATATAAGGGCCAAGTACC
66 TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * **
19079265 AGCACCCATCACACATCATGTGCGCACA-CCCCCCCGGCCACCCTGATCACCGGAACCCCAATGC
131 AGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGC
* ** *
19079329 CGCCGGTCAGGTTCT-CGACGATGGTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
196 CGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAG
* *
19079393 CACATGCCCGA-CCCAGCATGTGCTACCGCAACCCTCAGTCTGGT-TCGATCTTAGACT-GGAAT
261 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAAT
* * *
19079455 GAACTTCGTATGC-----CT----A-G------G--TG----A-T---CCCACTAAACGAGCGTA
325 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
** * **
19079494 CGGGCATTCAGCCGGCCAGAGGGGTGGGATGCATAAGCCGAGGATCGGCCGGGTCCCCCTCTGCG
390 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCG
* * * * *
19079559 TGCTACCGATCCTGCTGCCACAACCCTCGAT-CTAGTCTGATCTTAGACTGCGAATGAACTCCGT
455 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
19079623 ATGCCTAAGCCAACTGACGAATTGAACGGGCGGGCGGGCGGGCGGGCACTACGTCGGCTAGAGGG
519 ATGCCTAAGCCAACTGACG-A---AACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAG
* * *
19079688 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG
580 ACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTG
* *
19079753 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTACCTTAGGCCTTCACGTGAAGT
645 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * *
19079818 TTCATGGCAAGAC-AGCTCGTTTTCTATTTTTCATGATTTTTGAAATTTTTTACGGTTCGAGATT
710 TTCATGGCAAGACGA-CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
* * * * ** *
19079882 TTTTTAAATTTTTTCGGAAGCATTTTTTACCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTCT
774 TTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
*
19079946 TGGCATGCACAAAATAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
839 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
*
19080009 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTC
1 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * * *
19080074 TTTAAGGGGGTGCGAGTTTTCGAGGTTTGATGAGGGATAGAGGGCCAATCTAAGGGCCAAGTACC
66 TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
19080139 AGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCACCCGATTGTTGAAACCCCAATGC
131 AGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGC
* * * * *
19080202 CGTCGATCAGG---T-------T-CTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCCCCAG
196 CGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAG
*** ** * *
19080256 CACATG-CCGAGCCCAGCATCCACTTTCGCGACCCTCAGT-TCGGTCTGATCTTAGACTGGGAAT
261 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAAT
** * *
19080319 GAACTCC-TATGCTTAGACTACGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACAAGCGTG
325 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
** * * * * * * ** * *
19080383 TAGGCACTTAGCCGGACAGAGGGGTGGGATGCGTAAGCCGAGGATAGATCAGGTCCCCCTCTGCA
390 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCG
* * * * *
19080448 TGCTGCCGATCCTGCTACCGCAACCCTTGGTCAGGTCTGATCTTAGACTGGGAATGAACTCCATA
455 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
19080513 TGCCTAAGCTAACCGACGAAATGAGGGGGCGGGCGGGCGCGTGGGCACTACGCCGGCCAGAGAGA
520 TGCCTAAGCCAACTGACGAAACGAGCGGGCGGGC-GG-GC--GGGCACTACGCCGGCCAGAGAGA
* * *
19080578 TAGGATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGC
581 CAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGC
19080643 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
646 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
19080708 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGAGATTTT
711 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * **** * *
19080773 TTTAAATTTTTTCGGAAATCCTTTTTTGGCCCCAAACTTGGTAGACGCGATCCTTGTGTTTTTGT
776 TTAAAATTTTTTTGG-AA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
*
19080838 TGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
839 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
19080901 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAACGCTC
1 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * *
19080966 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCAAAGTACC
66 TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* **
19081031 AGCTCCCATCGCACATCATGTGCGCACA-CCCCCCCGG-CCCCCCGATCGTCGGAACCCCAATTT
131 AGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGC
* **
19081094 CGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATATGGCACCAG
196 CGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAG
* * * *
19081159 CACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCTGGTCCGATCTTAGACAGGGAATG
261 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATG
* *
19081224 AACTCCGTATGCTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGC
326 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* ** ** *
19081289 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCCAGTCCAACTCTACGT
391 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGT
* * * * * * * ** * * *
19081354 ACTGCTGATCCTGTTGCCACAACCATCGATCCGGTCCAATCTTAGACAGCGAATGAACTCTGTAT
456 GCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
19081419 GCCTAAGCCAACTGACGAAACAAGCGGGCGGGCGGCCGGGCGGGCACTACGCCGGCCAGAGAGAT
521 GCCTAAGCCAACTGACGAAACGAGCGGGC--G-GG-CGGGCGGGCACTACGCCGGCCAGAGAGAC
* * * **
19081484 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTG
582 AGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCA
*
19081549 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTT
647 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
*
19081614 CATGGCAAGACGACCCG-----TA-TTTT---GA------AAACTTTTTACGGTTCGGGATTTTT
712 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
* *
19081664 TAAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGG
777 TAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
*
19081729 CATGCA-AAAAAGAATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
842 CATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
*
19081789 AAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTC
1 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
19081854 TTTAAGGGGGTGCGAGTACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
66 TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
19081919 AGCACCCATTGCACATCATGTGCGCTCACCCCCTCCCGGCCCCCCCGATCGCCGGAACCCCATTG
131 AGCACCCATCGCACATCATGTGCGCACACCCCC-CCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * * * * * **
19081984 CCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCTGGTGAAG-AAAATGTGGCTGCA
195 CCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCA
*
19082048 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGTCTGGGAAT
260 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
* * * *
19082113 GAACTCCGTATGCTTAGACTTGGAATGAACTCCATATCCCTATGTCAACCCACGAAACGAGCGTG
325 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* ** * * * *
19082178 CGGGCGCTCAGCCGGCCAGAGGGGCGGAATGCATAAGCTGAGGATCGACCGTGTCCCCCTCTGTG
390 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCG
** * ** * * * *
19082243 TGCTGTTGATCCTACTATCGCAACCCTTGGTCCGATCCGATCTTAGATTGGGAATGAACTCTGTA
455 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTA
** ** * *
19082308 TGCCTAAGAAAACTGACGAAACGAGCGGATGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGG
520 TGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACAGG
* * * * *
19082373 ATGCGCAAGCCTTTGATCGATAGGGTGATAGGTGAGTTTAGGCACATCTTCATATTTCTACGTGC
585 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCATGC
*
19082438 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGCTCCCTTAAGCCTTCACGTGAAGTTTCAT
650 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* **
19082503 GGCAAGACGACCCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAA
715 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * *
19082568 TATTTTTTTGGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCAT
780 AATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
19082633 GCA-AAACAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
845 GCACAAA-AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
19082690 AAAGTGTCCCCATTTCAGACGCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATGCTC
1 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
19082755 TTTAAGGGGGTGTGAGTACTCGAAGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
66 TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
19082820 AGCACCCATCGCACATCATGTGCGCTCACCCCCTCCCGGCCCCCCCGATCGTCGAAACCCCAATG
131 AGCACCCATCGCACATCATGTGCGCACACCCCC-CCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * * * * *
19082885 CCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCTA
195 CCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCA
* * * * *
19082950 GCACATGCTCGTGCCCAGCATGTGCTGTCGTAACCCTCGGTCTGGTCTGATCTTAGTCTGGGAAT
260 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
* * * * * *
19083015 GAACTTCGTATGCTTAGACTGGGAATGAACTTCGTATGCCCAAATCAACCCGCGAAACGACCGTG
325 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
19083080 CAGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTACG
390 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCG
* * * * * *
19083145 TGCTGCCGATGCTGCTACCGCAACCCTCGGTCCGTTCTAATCTTACACTAGGAATGAACTCCGTA
455 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTA
*
19083210 TGCCTAAGACAAC
520 TGCCTAAGCCAAC
19083223 ACATGCCCGA
Statistics
Matches: 5108, Mismatches: 607, Indels: 265
0.85 0.10 0.04
Matches are distributed among these distances:
862 5 0.00
863 83 0.02
864 13 0.00
865 30 0.01
866 38 0.01
867 139 0.03
868 8 0.00
869 2 0.00
870 105 0.02
871 3 0.00
872 1 0.00
873 56 0.01
874 457 0.09
875 1 0.00
876 1 0.00
877 5 0.00
878 1 0.00
879 218 0.04
880 360 0.07
881 47 0.01
883 2 0.00
884 47 0.01
885 35 0.01
886 260 0.05
887 12 0.00
888 246 0.05
889 380 0.07
890 345 0.07
891 139 0.03
892 331 0.06
893 153 0.03
894 2 0.00
895 3 0.00
896 10 0.00
897 117 0.02
898 381 0.07
899 5 0.00
900 2 0.00
901 377 0.07
902 249 0.05
903 42 0.01
904 52 0.01
905 337 0.07
907 3 0.00
908 4 0.00
909 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (901 bp):
AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
AGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGC
CGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAG
CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATG
AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGT
GCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGA
TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCATGCC
AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
ATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
Found at i:19083037 original size:26 final size:26
Alignment explanation
Indices: 19083001--19083053 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19082991 CTGGTCTGAT
*
19083001 CTTAGTCTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
19083027 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
19083053 C
1 C
19083054 CCAAATCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.17, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:19083376 original size:26 final size:26
Alignment explanation
Indices: 19083340--19083392 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19083330 CTGGTCTGAT
19083340 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
* *
19083366 CTTAGGTTGGGAATGAAGTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
19083392 C
1 C
19083393 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.15, G:0.30, T:0.30
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCGTATG
Found at i:19084354 original size:185 final size:184
Alignment explanation
Indices: 19084030--19084443 Score: 668
Period size: 185 Copynumber: 2.2 Consensus size: 184
19084020 GTGCTACCAT
*
19084030 AACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTACGCTTAGACTGGGAATGAACT
1 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA-GCTTAGACTGGGAATGAACT
*
19084095 CTGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGAGATG
65 CTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGAGATG
* * * * * * *
19084160 CGTAAGCCGGGGATTGGTCGGGTTCCCCTCTGCGTGCTTCCGATCCTGCTGCCGC
130 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTACTACCGC
*
19084215 AACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCTGT-GCTTAGACTGGGAATGAACT
1 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC-GTAGCTTAGACTGGGAATGAACT
*
19084279 CTGTATGCCTAAGTCAACCCACGAAAATGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGGGAT
65 CTGTATGCCTAAGTCAACCCACG-AAATGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGAGAT
19084344 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTACTACCGC
129 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTACTACCGC
* * *
19084400 AACCCTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTTCGTA
1 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
19084444 TGCCTAAGCT
Statistics
Matches: 211, Mismatches: 15, Indels: 6
0.91 0.06 0.03
Matches are distributed among these distances:
184 44 0.21
185 165 0.78
186 2 0.01
ACGTcount: A:0.21, C:0.29, G:0.29, T:0.21
Consensus pattern (184 bp):
AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAGCTTAGACTGGGAATGAACTC
TGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGAGATGC
GCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTACTACCGC
Found at i:19086691 original size:26 final size:26
Alignment explanation
Indices: 19086655--19086707 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19086645 CCGGTCCGAT
19086655 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
*
19086681 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
19086707 C
1 C
19086708 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:19087595 original size:26 final size:26
Alignment explanation
Indices: 19087545--19087597 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19087535 CTGGTCCAAT
*
19087545 CTTAGACTAGGAATGAACTATGTATG
1 CTTAGACTAGGAATGAACTACGTATG
* *
19087571 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTACGTATG
19087597 C
1 C
19087598 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTACGTATG
Found at i:19090258 original size:26 final size:26
Alignment explanation
Indices: 19090222--19090274 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19090212 CCAGTCCGAT
*
19090222 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19090248 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19090274 C
1 C
19090275 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19090660 original size:26 final size:26
Alignment explanation
Indices: 19090621--19090673 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19090611 CCGGTCCGAT
*
19090621 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
19090647 CTTAGACTGTGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19090673 C
1 C
19090674 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19092197 original size:26 final size:26
Alignment explanation
Indices: 19092161--19092213 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19092151 CTGGTCCGAT
*
19092161 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAAACTGGGAATGAACTCCCTATG
*
19092187 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCCTATG
19092213 C
1 C
19092214 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCCTATG
Found at i:19093068 original size:26 final size:25
Alignment explanation
Indices: 19093039--19093090 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
19093029 CTGGTCCGAT
19093039 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACT-CGTATG
*
19093065 CTTAGACTGGGAATGAACTCGTATG
1 CTTAGACTAGGAATGAACTCGTATG
19093090 C
1 C
19093091 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 7 0.28
26 18 0.72
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (25 bp):
CTTAGACTAGGAATGAACTCGTATG
Found at i:19094488 original size:26 final size:26
Alignment explanation
Indices: 19094452--19094504 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19094442 TCGGTCCGAT
19094452 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
*
19094478 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
19094504 C
1 C
19094505 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:19096123 original size:900 final size:896
Alignment explanation
Indices: 19093668--19098952 Score: 7109
Period size: 902 Copynumber: 5.9 Consensus size: 896
19093658 AAATCTCAAA
* * * * * * *
19093668 TGCAAGCCGGGGATTGGTCGGGTCCCCCTCCGTGTGCTGCCAATCCTACTACC-ATAACCCTCAG
1 TGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGA-AACCCTCGG
* * * * * *
19093732 TCTGATC-GGATCTTAGACTGGGAATGAACGCCGTATGCCTAAGCCGACTGATGAAACGAGCG-G
65 TCTGGTCTAG-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCG
* * * *
19093795 -GCGGGCGGGAACTACGTCGGCCAGAGAGACAGGATGCGCAAGGCATGGATCGATAGGGTGGTAG
129 AGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
19093859 GTGGTTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
194 GTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
19093924 CAATGGTCCTTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
259 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * *
19093989 TTTTTAAAACGTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAAC
324 TTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAAC
* * *
19094054 TTGGCAGACGTGATCCATGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGT
389 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
19094119 GTACAAGATTTTGTGACCATTT-AAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
454 GTACAAGATTTTGTGACCATTTGAAAAAAA-TGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* *
19094183 AGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
518 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * * * *
19094248 AGAGCGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTGCACA-ACCCCCCCGAC
583 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGC
*
19094312 CCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGAGCC
648 CCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCC
* * *
19094377 CCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCTAGAATGTGCTGCCGCAACCCTCGGT
713 CCGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * *
19094442 TCGGTCCGATCTTAGACTGGGAATGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCT
778 CCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
*
19094507 AAGTCAACCCATGAAACGAGCGTACAGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
843 AAGTCAACCCACGAAACGAGCGTAC--GGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * *
19094563 TGCAAGTCGGGAATCGGTCGGGTCCCCCTCT-CGTGCTGCCGATCTTGCTGCC-ACAACCCTCGG
1 TGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGA-AACCCTCGG
* *
19094626 TCCGGTCTAGTCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
65 TCTGGTCTAGTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--GC
* * * *
19094691 GGGCGGGCGCGCGTGCACTATGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCAATAGGGT
128 GAGC-GG-GCG-G-GCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGT
** *
19094756 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGGTTGTAAAT
189 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAAT
19094821 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
254 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * * * *
19094886 CATGATTTTCAAAACTTTTTGCAGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTAGCCC
319 CACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCC
* * * *
19094951 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGCATCCATAAAAAAATTCAGTTAAAAACTC
384 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
19095016 GATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
449 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTAC
* * * *
19095081 TGGCAGCAAACCTGTAAAATATCAAGTGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGAG
514 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAG
* *
19095146 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATCATGT--GCACAACCCCC
579 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * *
19095209 CGGCCGCCCCGATCGCCGAAACCCCAATGCCATCGGCCAGGTTCTCCGATGATGCTCCGGCGATG
644 CGGCC-CCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATG
19095274 GTGCCCCGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
708 GTGCCCCGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * * * * * *
19095339 TTGATCTGGTCCGATCTTAGACTGGGAATGGACTCCTTATGCTTAGACTGGGAATGAACTCTGTA
773 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * *
19095404 TGCCTATGTCAACCCACGAAACGAGCGTACGG-GCTCAGCCGGCCATAGGGGCAGGATG
838 TGCCTAAGTCAACCCACGAAACGAGCGTACGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * *
19095462 TGCAAGTCGGGGATCGGTCGGGTCCCCCTTTGCGTGCTGCCGATCTTGCTACCGAAACCCTCGGT
1 TGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGAAACCCTCGGT
* *
19095527 CTGATCTAGTCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG
66 CTGGTCTAGTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--GCG
** *
19095592 AGCGGGCTCGCGTGCACTACTTCGGCCAGAGAGACAGGATGCGCAAGTCGTGGATCGATAGGGTG
129 AGCGGG--CG-G-GCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTG
19095657 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATT
190 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATT
* *
19095722 CATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTTCATGGCAAGACGACTCATTTTCTA-TTTT
255 CATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTTTT
*
19095786 CACGATTTTTAAAAC-TTTTAC-GTTCAGGATTTTTTAAAATTTTTTTGGAAGGA-TTTTGGCCC
319 CACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCC
* * * *
19095848 CAAACTTGGTACAACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTTAGCTAAAAACT
384 CAAACTTGGTA-GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
19095913 CGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAATGTCCCCGTTTCAGACACTTTAATGGCTA
448 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTA
* * * * **
19095978 CTGGCAGCAAACCTATAAAATCTCAAATGATCTTTAAGGAAGTGCGAGTTGACGAGGTTTGATGA
513 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGA
** * * *
19096043 GGGATAGGGGGCCAATATAAGGGCCATTTACTAGCACCCATCGCATATCATGTACGCACACCCCC
578 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * *
19096108 CCAGCCCCTCCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACAATGCTCCGACGAT
643 CCGGCCCC-CCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGAT
* * ** * * * * *
19096173 GGTACCTCGGGGTAGAAAAATGC-GACACCAGCACATGCTCGAGCCCAGCACGTACTGCCGTAAC
707 GGTGCCCCGATGAAGAAAAATGCAG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * * * *
19096237 CCTCGGTCCTATCCAATCTTAGACTGGGAATGAACTTCATATCCTTAGACTGGGAATGAACTCCG
771 CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
19096302 TATCCCTAAGTCAACCCACGAAACGATCGTGCAAGCGCTCAGCCGGCCAGAGGGGCGGGATG
836 TATGCCTAAGTCAACCCACGAAACGAGCGTAC-GGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * ** * * *
19096364 CGCAAGCCGGGGATCAGTCGGGTCCCCCTCTGTGTGCTGTTGATCCTGCTGTCGTAACCCTCGAT
1 TGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGAAACCCTCGGT
* * * *
19096429 -TCGGTCT-GATCTGAGACTGGGAATGAACTCCGTATGTCTAAGCCAACCGATGAAACAAGCGGG
66 CT-GGTCTAG-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G
* * * * *
19096492 CGAGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGTAGGCCGTGGATTGATAGGG
127 CGA----GCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGG
* * *** *
19096557 TGGTTGGTGGGTTTAGGCACATCTTTATATTTCTGTGTGCCAATGCCATTTTTATGGCTTATAAA
188 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAA
* *
19096622 TTCATACAATGTTCCCTTAAGCCTTCACGTGAAGTTTCAAGGCAAGACGACTCGTTTTCTATTTT
253 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
** ** *
19096687 TCACGATTTTCCAAACTTTTTGGGGTTCGGGATTTTTT-AAATTTTTTTCGGAATGAGTTTTGGC
318 TCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTT-GGAAGGAGTTTTGGC
* * *
19096751 CCCAAACCTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAACC
382 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
*
19096816 TCGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCT
447 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCT
* *
19096881 ACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
512 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATG
** *
19096946 AGGGATAGGGGGCCAATATAAGGGCTGAGTACCAGCACCCATCACACATCATGTGCGCACAACCC
577 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCC
* * * *
19097011 CCGCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTTCCG-CGATGCTCCGGT
641 CC-CCGGCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTC-TCCGACGATGCTCCGGC
*
19097075 GATGGTGCCCCGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGTATGTGCTGCCGCA
704 GATGGTGCCCCGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * *
19097140 ACCCTCAGTCCGGTCCGATCTTCGACTCGGAATGAAC-CTCGTATGCTTAGACTGGGAATGAACT
769 ACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTC-CGTATGCTTAGACTGGGAATGAACT
* * * * *
19097204 CCGTATGCCTAAGTCAACCAATGAAACGAGCATGCGGGCGCTCAGCCGGCCAGATGGGCGGGATG
833 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC-GGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * ** *
19097269 CGCAAGTCGGGGATCGGCCGGGTCACCCTCTGTGTGCTGTTGATCCTGCTGCCGTAACCCTCGGT
1 TGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGAAACCCTCGGT
* * *
19097334 CTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACCAAATGA--GC-A-
66 CTGGTCTAGTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGAG
* * *
19097395 --GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGGTAGGGTGGTAGGT
131 CGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * * * * ** *
19097458 GGGTTTGGGCACATCTTTATATTTCTACGTGCGAATACCATTTTTATCACTTGTAAACTCATACA
196 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
19097523 ATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATT
261 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* *
19097588 TTTAAAACTTTTTACGGTTCGGGATTTTTT-AAATTTTTTCGGAAGGAGTTTTGGTCCCAAACTT
326 TTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
* *
19097652 AGTAGAGGTGATCCTTGTATTTTTGTTGGCATGCA-AGAAAAAATTCAGCTAAAAACTCGAAGTG
391 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA-AAAAAATTCAGCTAAAAACTCGAAGTG
* * * *
19097716 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTCAGACACTTTAACGGCTACTGGCAA
455 TACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * * *
19097781 CAAACCTGTAAAATCTCAGATGCTCTTTAA-GAGGGTGTGAGTTTTCAAGGTTTGATAAGGGATA
520 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGA-GGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
19097845 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGGCC
584 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC
* * * ** *
19097909 CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGATGATAGTG-CC
649 CCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCC
* * * * * *
19097973 CGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGACTAGCATATGCTACC-CTAACCCTCGGT
714 CGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC-AACCCTCGGT
* * * *
19098037 CCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAGACAGGGAATGAACTCCGTATGCCT
778 CCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * *
19098102 AGGTCAACCCACAAAACGAGTGTGCGAGTC-CTCCGTCGGCCAGAGGGGCGGGATG
843 AAGTCAACCCACGAAACGAGCGTACG-G-CGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * *
19098157 AGCAAGCCGGCGATCGGCCGGGTCCCCCTCTACATGCTGCCGATCCTTCTG-C--AACCCTCGGT
1 TGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGAAACCCTCGGT
* * * * * *
19098219 CTGGTCCAATTTTAGACTGGGAATGTACTCCGTATGCCTAAGGCACCCGACGAAACGA--GCGAG
66 CTGGTCTAGTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGAG
* * * * * *
19098282 CGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGAAACCCGTGGATCTATGGGGTGGTAGGT
131 CGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* *
19098347 GGCTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
196 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* *
19098412 ATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA-A-GACTCGTTTTCAATTTTTCACGATT
261 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* ** * *
19098475 TTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTGGAAGGATTTTTTAG-CCCAAACT
326 TTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGA-GTTTTGGCCCCAAACT
* *
19098539 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTG
390 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
* * *
19098604 TACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCTTTTCAGACACTTTAATGGCTACTGGCAG
455 TACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
19098669 CAAACCTGTAAAATCTCAAATGCTCTTTAA-GAGGGTGTGAGTTCTCAAGGTTTGATGAGGGATA
520 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGA-GGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * *
19098733 GGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCTCGGCC
584 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC
* * * *
19098798 CCCCGATCACCGGAAGCTCAATGCCGTCGGTCAGGTTCTCCGACGA---T---G-G-T-G-G-CC
649 CCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCC
* ** ** *
19098852 CGACGAAGAAAAAT--ATGACACCAGCACATGCCCGAGCCCAGCATGTGCTATCATAACCCTTGG
714 CGATGAAGAAAAATGCA-G-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
*
19098915 TCCGATCCGATCTTAGACAGGGAATGAACTCCGTATGC
777 TCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
19098953 CTAAGTCAGC
Statistics
Matches: 3910, Mismatches: 420, Indels: 136
0.88 0.09 0.03
Matches are distributed among these distances:
878 1 0.00
879 88 0.02
880 1 0.00
881 1 0.00
882 1 0.00
885 63 0.02
886 2 0.00
887 53 0.01
888 457 0.12
889 260 0.07
890 4 0.00
891 3 0.00
892 245 0.06
893 209 0.05
894 76 0.02
895 28 0.01
896 1 0.00
897 20 0.01
898 245 0.06
899 65 0.02
900 465 0.12
901 68 0.02
902 937 0.24
903 21 0.01
904 241 0.06
905 338 0.09
906 17 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
TGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGAAACCCTCGGT
CTGGTCTAGTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGAG
CGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
TTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
ACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
AAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC
CCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCG
ATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
ATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
TCAACCCACGAAACGAGCGTACGGCGCTCAGCCGGCCAGAGGGGCGGGATG
Found at i:19096305 original size:26 final size:26
Alignment explanation
Indices: 19096254--19096306 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19096244 CCTATCCAAT
*
19096254 CTTAGACTGGGAATGAACTTCATATC
1 CTTAGACTGGGAATGAACTCCATATC
*
19096280 CTTAGACTGGGAATGAACTCCGTATC
1 CTTAGACTGGGAATGAACTCCATATC
19096306 C
1 C
19096307 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATC
Found at i:19098078 original size:26 final size:26
Alignment explanation
Indices: 19098049--19098103 Score: 92
Period size: 26 Copynumber: 2.1 Consensus size: 26
19098039 GATCTGATCT
* *
19098049 TAGACTGGGAATGAACTCTGTATGCC
1 TAGACAGGGAATGAACTCCGTATGCC
19098075 TAGACAGGGAATGAACTCCGTATGCC
1 TAGACAGGGAATGAACTCCGTATGCC
19098101 TAG
1 TAG
19098104 GTCAACCCAC
Statistics
Matches: 27, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.29, C:0.20, G:0.27, T:0.24
Consensus pattern (26 bp):
TAGACAGGGAATGAACTCCGTATGCC
Found at i:19100627 original size:26 final size:26
Alignment explanation
Indices: 19100597--19100646 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
19100587 CCAATCCGTT
19100597 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
*
19100623 CTTAGATTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
19100647 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:19101503 original size:26 final size:26
Alignment explanation
Indices: 19101467--19101519 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19101457 CTGGTCGAAT
*
19101467 CTTAGGCTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19101493 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19101519 C
1 C
19101520 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19101709 original size:4 final size:4
Alignment explanation
Indices: 19101700--19101729 Score: 51
Period size: 4 Copynumber: 7.5 Consensus size: 4
19101690 GACGAAACGA
*
19101700 GCGG GCGG GCGG GCAG GCGG GCGG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GCGG GC
19101730 ACTATGCCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
4 24 1.00
ACGTcount: A:0.03, C:0.27, G:0.70, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:19101721 original size:16 final size:16
Alignment explanation
Indices: 19101700--19101730 Score: 62
Period size: 16 Copynumber: 1.9 Consensus size: 16
19101690 GACGAAACGA
19101700 GCGGGCGGGCGGGCAG
1 GCGGGCGGGCGGGCAG
19101716 GCGGGCGGGCGGGCA
1 GCGGGCGGGCGGGCA
19101731 CTATGCCGGC
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 15 1.00
ACGTcount: A:0.06, C:0.26, G:0.68, T:0.00
Consensus pattern (16 bp):
GCGGGCGGGCGGGCAG
Found at i:19102405 original size:26 final size:26
Alignment explanation
Indices: 19102376--19102428 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19102366 TTGGTCCGAT
19102376 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19102402 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19102428 C
1 C
19102429 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19103615 original size:868 final size:866
Alignment explanation
Indices: 19098987--19104164 Score: 6416
Period size: 868 Copynumber: 5.9 Consensus size: 866
19098977 TGCGGGTGCC
* * * *
19098987 CCTCTGCATGCTGCTGATCCTGCTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGA
1 CCTCTGCGTGCTGC-GATCCTGCTACCGCAACCCTCGGT-CGGT-CTATCTTAGACTGGGAATGA
* * * * * * *
19099052 ACTCTGTATGCCTAAGCCAACCGACGAAATGAGTGAGCGAGC--G-GG-CACTACGCTGGCCAGA
63 ACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGCCACTACGCCGGCCAGA
* *
19099113 GAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTT
128 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * *
19099178 CTGCGTGCCAATGCCATTTTTATGGCTT-TAAACTCATACAATGTTCGCTTAAGCCTTCACGTGA
193 CTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
19099242 AGTTTCATGGCAAGACGA-TCCGTTTTCTATTTTTCACGATTTTCT-AAACTTTTTACGGTTCGG
258 AGTTTCATGGCAAGACGACT-CGTTTTCTATTTTTCACGATTTT-TGAAACTTTTTACGGTTCGG
*
19099305 GATGTTTTAAAATTTTTTCGGAAGG-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
321 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
19099369 TTCTTGGCATGCACATAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
386 TTTTTGGCATGCACA-AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
19099434 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
450 AAAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
19099499 TCTTTAAAGGGGTTTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
514 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
19099564 CCAGCACCCATCGCACATCATGTGTGCACACCCCCACCGGCCCCCCAAGCGTCGAAACCCCAATA
579 CCAGCACCCATCCCACATCATGTGCGCACA-CCCC-CCGGCCCCCCGATC-TCGGAACCCCAATG
* * * * *
19099629 CCGTCGGTCAGGTTCTCCGAG-GATGGTCCGATGATGGTGCCCC-GACGAAGAAAAATGC-ACAC
641 CCGCCGGTCAGGTTCTCCG-GCGATGCTCCGACGATGGTGCCCCTG-CAAAGAAAAATGCGGCAC
* * * *
19099691 CAGCACATGCCCGAGCCTAGCGTATGCTGCCGTAACCC-TCGGTCTGGTCCGATCTTAGACTGGG
704 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTCGGTCTGGTCCGATCTTAGACTGGG
* * * *
19099755 AATGAACTCCGTATGCCTAAGTCAACCCAGGAAATGAGCGTGTGGCCGCTCA---GCC-----GG
769 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCGGCCAGAGGGG
*** *
19099812 C----T------G---GGGATCGGTTGGGTTCC
834 CGGGATGCGCAAGCCAGGGATCGACCGGGTTCG
* * * ** * *
19099832 CCTCTGTGTGCTACCAATCCTGCTGTCACAACCCTCGGTCTTGTCTGATCTTAGACTGGGAATGA
1 CCTCTGCGTGCT-GCGATCCTGCTACCGCAACCCTCGGTC-GGTCT-ATCTTAGACTGGGAATGA
* * * * *** ** * *
19099897 ACTCCATATGCCTAAGCCAACCGATAAAACGAGCGGGTGGGCGGGCAG--ACGGGTGGGGGGCAC
63 ACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGCCAC-TACGCCGGCCAG
*
19099960 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCACATT
127 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
19100025 TCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACGTG
192 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* *
19100090 AAGTTTCATGTCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAG
257 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
* * * *
19100155 ATTTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGGGATCCCTGTATTT
322 A-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
19100220 TTGTTGGCATGCACCAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
386 TTTTTGGCATGCA-C-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * *
19100285 AAAAAAGTGTCCCCATTTGAGACACTTTAATGTCTACTGGCAACGAACCTGTAAAATCTCAAATG
449 AAAAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
19100350 CTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
513 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * ** *
19100415 ACCAGCACCCATCGCACATCATGTGTGCACACCCCCCTGGCCACCTAGATCGCAGGAACCCCAAT
578 ACCAGCACCCATCCCACATCATGTGCGCACACCCCCC-GGCC-CCCCGATCTC-GGAACCCCAAT
* * * *
19100480 GCCGTCGGTCAGGTTCTCCGGCGATGCTCCGATGATGGTGCCCCAGCGAAGAAAAATGCGGCACC
640 GCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCTGCAAAGAAAAATGCGGCACC
* * **
19100545 GGCACATACCCGAGCCCAGCATGGGCTGCTGCAAGCCTCGGTCCAATCCGTTCTTAGACTGGGAA
705 AGCACATGCCCGAGCCCAGCAT--G-TGCT----G-C-C-G--CAA-CC---CTT---C--GGTC
* * * *
19100610 TGAACTCCGTACGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGCGT
749 TG--GTCCG-A-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * *
19100675 GCGGGCGCTCAACTGGCCAGAGGGGCGGGACGCGCAAGCCGGGGATCGACCGGGTCCT
810 GCGGGCGCTC-ACCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGACCGGGTTCG
* * * * *
19100733 CCTCTGCATGCTGCTGATCCTACTGCCGTAACCCTAGGTCCGGTCTAATCTTAGACTGGGAATGA
1 CCTCTGCGTGCTGC-GATCCTGCTACCGCAACCCTCGGT-CGGTCT-ATCTTAGACTGGGAATGA
* * *
19100798 ACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGTCGGC
63 ACTCCGTATGCCTAAGCCAACCGATG-AA--A-CGAGCGGGCGGGCGGGCGGCCACTACGCCGGC
* * *
19100863 CAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTCAGGCACATCTTCAT
124 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * * *
19100928 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAGAATTGTCCCTTAAGCCTTGAC
189 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * ** ** *
19100993 GTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTGTCGAATTTTTTTGTGGTTT
254 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC
* * *
19101058 GGGATTTTTTAAAATTTTTTTGGATGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTAT
319 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * *
19101123 TTTTTTTGGCGTGCACAAAAAACTTCAGCTAAAAACTCAAAGTGTACAAGATTTTGGGACCATTT
384 TTTTTTTGGCATGCACAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
*
19101188 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAAT
448 GAAAAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * * * *
19101253 GCTCTTTATGGGGGTGTGGGTTCGCGAGGTTTGATGAGGGATA-AGGACCAATATAAGGGCCAAG
512 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * **
19101317 TACCAGCACCCATCGCACATCATGTGCGCACACCCCAGCCGACCCCTCGATCGTCGGAACCATAA
577 TACCAGCACCCATCCCACATCATGTGCGCACACCCC--CCGGCCCCCCGATC-TCGGAACCCCAA
* *** ** ** * ** *
19101382 TACCGTATGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCGAGCCTAG-TATGTGCTGC-C
639 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCTGCAAAGAAAAATGCGGCAC
* * * * * ** * * * ** *
19101445 GCAACCCTTGGTCTG-GTCGAATCTTAG-GCTG--GGAA----T-GAAC---TCCATATGCTTAG
704 -CAGCACAT-GCCCGAG-CCCAGCAT-GTGCTGCCGCAACCCTTCGGTCTGGTCC-GAT-CTTAG
* * *
19101498 ACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAACCGAGCGTGCGGGCGCTCAGCCGGCT
763 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA-CCGGCC
* * ** * *
19101563 AGAGGGGCGAGATGCGCAAGCCGGGGATCGGTCGGGTCCC
827 AGAGGGGCGGGATGCGCAAGCCAGGGATCGACCGGGTTCG
* * * * * * *
19101603 CCTCTGCGTGCTACCGATCCTACTGCCACAACTCTTGGTTCGATCTAATCTTAGACTGGGAATGA
1 CCTCTGCGTGCT-GCGATCCTGCTACCGCAACCCTCGG-TCGGTCT-ATCTTAGACTGGGAATGA
*
19101668 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGCGGGCGGGCACT
63 ACTCCGTATGCCTAAGCCAACCGATGAAACGA----GCGGGC--G--GGCGGGC-GGC---CACT
* *
19101733 ATGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
116 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* *
19101798 ATCTTCACATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
181 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
19101863 GCCTTCACGTGAAGTTTCATGTCAAGACGACTCGTTTTCTATTTTTCACGAATTTTGAAACTTTT
246 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* * * * *
19101928 TGCGGTTCGAGATTTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGGGA
311 TACGGTTCGGGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
*
19101993 TTCC-TGTATTTTTGTTGGCATGCACCAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
375 -TCCTTGTATTTTTTTTGGCATGCA-C-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
19102057 TGTGACCATTTGAAAAAAGTGTCCCTATTTCA-AAACTTTAGTGGCTACTGGCAGCAAACCTGTA
437 TGTGACCATTTGAAAAAAGTGTCCC-ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
19102121 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
501 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
19102186 TAAGGGCCAAGTACCAGCACCCATCCCACATCATGTGCGCA-ACCCCCCCGGCCCCTCCGATC-C
566 TAAGGGCCAAGTACCAGCACCCATCCCACATCATGTGCGCACA-CCCCCCGGCCCC-CCGATCTC
19102249 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGTTG--AAGA
629 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC--TGCAAAGA
* *
19102312 AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTGGTTTGGTCCGATC
692 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC-----T--T-CG---
* *
19102377 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCA
746 ---GTCT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * *
19102442 TGAAACGAGCGTGCGGGCGCTCAACCTGCCAAAGGGGCGGGATGCACAAGCCAGGGATCGACCGG
798 CGAAACGAGCGTGCGGGCGCTC-ACCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGACCGG
19102507 G-TCTG
862 GTTC-G
* *
19102512 CCTCTGCGTGCTGTCGATCCTGCTACCGTAACCCTCGGTTGGTCTATCTTAGACTGGGAATGAAC
1 CCTCTGCGTGCTG-CGATCCTGCTACCGCAACCCTCGGTCGGTCTATCTTAGACTGGGAATGAAC
** *
19102577 -CCGTATGCCTAAGCCAACCGATGAAACGAGCGAACGGGCGGGCGGGCACTACGCCGGCCAGAGA
65 TCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGCCACTACGCCGGCCAGAGA
19102641 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
130 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
19102706 ACGTGCCAATGCCATTTTTATGGCTTGTAAATTCTTACAATGGTCCTTTAAGCCTTCACGTGAAG
195 GCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * *
19102771 TTTCAAGGCAAGACGACTCGTTTTCTATTTTTTAGGATTTTTGAAACTTTTTACGGTTTGGGATT
260 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
* * *
19102836 TTTTAAAATTTTCTCAGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTTT
325 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTT
*
19102901 TGGCATGCACAAAAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
390 TGGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
19102966 GTGTCTCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
455 GTGTC-CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
*
19103031 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
519 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
19103096 ACCCATCTCACATCATGTGCGCACACCCCCCGACCCCCCGATCGTCGG-ACCCCAATGCCGTCGG
584 ACCCATCCCACATCATGTGCGCACACCCCCCGGCCCCCCGATC-TCGGAACCCCAATGCCGCCGG
* * * * * **
19103160 TCAGATTTTTCGGCGATGCTCCGGCGATGGTGCCCCTGCAAAGAAAATTGTAGCACCAGCACATG
648 TCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCTGCAAAGAAAAATGCGGCACCAGCACATG
*
19103225 CCCGAGCCCAGCATGTGCTGTCGCAACCC-TCGGTCTGGTCCGATCTTAGACTGGGAATGAACTC
713 CCCGAGCCCAGCATGTGCTGCCGCAACCCTTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTC
19103289 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCGGCCAGAGGGGCGGGATGCG
778 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCGGCCAGAGGGGCGGGATGCG
19103354 CAAGCCAGGGATCGACCGGGTTCG
843 CAAGCCAGGGATCGACCGGGTTCG
* * *
19103378 CCTCTGCGTGCTGCAGATCCTGCTACCGCAACCCTCAGTCCGGGCTGATCTTAGACT-GTAATGA
1 CCTCTGCGTGCTGC-GATCCTGCTACCGCAACCCTCGGT-CGGTCT-ATCTTAGACTGGGAATGA
* * *
19103442 ACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGGGCGGCCACTACGTCGGGCAGA
63 ACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGCCACTACGCCGGCCAGA
*
19103507 GAGACGGGATGCGCAAGCCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
128 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*
19103572 CTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
193 CTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * * * *
19103637 AGTTTCATGGCAAGACGACTTGTTTTTTATTTTTCATGATTTTCGAAACTTTTTACGGTTGGGGA
258 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA
* *
19103702 TATTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTA-TTTT
323 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
19103766 TTTGGCATGCACAAATAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
388 TTTGGCATGCACAAA-AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
19103831 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
452 AAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
19103896 CTTAAGTGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
516 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * *
19103961 AGCACCCATCGCACATCATGCGCGCACACCCCCCGGTCCCCCGATCTTCGGAACCCCAATGCCGC
581 AGCACCCATCCCACATCATGTGCGCACACCCCCCGGCCCCCCGATC-TCGGAACCCCAATGCCGC
** * *
19104026 CGGTCAGGTTCTCCGATGACGCTCCGTCGATGGTGCCCC-GACAAAGAAAAATGCGGCACCAGCA
645 CGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCTG-CAAAGAAAAATGCGGCACCAGCA
* * * * *
19104090 CATGCCCGAGCCCAGCATGTGATGCCGTAACCCTTC-GTCTAGTCCAATCTTAGACTAGGAATGA
709 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTCGGTCTGGTCCGATCTTAGACTGGGAATGA
19104154 ACTCCGTATGC
774 ACTCCGTATGC
19104165 TTAGACTGGG
Statistics
Matches: 3775, Mismatches: 390, Indels: 312
0.84 0.09 0.07
Matches are distributed among these distances:
844 2 0.00
845 83 0.02
846 1 0.00
847 3 0.00
848 96 0.03
849 91 0.02
850 24 0.01
851 58 0.02
852 270 0.07
853 24 0.01
856 4 0.00
860 1 0.00
861 1 0.00
862 1 0.00
863 1 0.00
865 3 0.00
866 81 0.02
867 94 0.02
868 526 0.14
869 139 0.04
870 188 0.05
871 2 0.00
872 2 0.00
873 1 0.00
874 7 0.00
875 9 0.00
876 1 0.00
877 69 0.02
878 210 0.06
879 215 0.06
880 114 0.03
881 7 0.00
883 5 0.00
884 1 0.00
888 3 0.00
889 2 0.00
890 3 0.00
891 72 0.02
892 247 0.07
893 69 0.02
894 196 0.05
896 1 0.00
897 2 0.00
898 10 0.00
900 5 0.00
901 86 0.02
902 19 0.01
903 126 0.03
904 145 0.04
905 88 0.02
906 210 0.06
907 22 0.01
908 6 0.00
909 128 0.03
910 1 0.00
ACGTcount: A:0.24, C:0.24, G:0.26, T:0.26
Consensus pattern (866 bp):
CCTCTGCGTGCTGCGATCCTGCTACCGCAACCCTCGGTCGGTCTATCTTAGACTGGGAATGAACT
CCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGCCACTACGCCGGCCAGAGAG
ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTT
GGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
TGTCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
CCATCCCACATCATGTGCGCACACCCCCCGGCCCCCCGATCTCGGAACCCCAATGCCGCCGGTCA
GGTTCTCCGGCGATGCTCCGACGATGGTGCCCCTGCAAAGAAAAATGCGGCACCAGCACATGCCC
GAGCCCAGCATGTGCTGCCGCAACCCTTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGT
ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCGGCCAGAGGGGCGGGATGCGCAA
GCCAGGGATCGACCGGGTTCG
Found at i:19104176 original size:26 final size:26
Alignment explanation
Indices: 19104138--19104190 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19104128 CTAGTCCAAT
19104138 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
19104164 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
19104190 C
1 C
19104191 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:19104910 original size:26 final size:26
Alignment explanation
Indices: 19104881--19104933 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
19104871 CCTGTCCGAT
*
19104881 CTTAGACT-GGGAATGAACTCCGTATG
1 CTTAGA-TAGGGAATGAACTCCATATG
19104907 CTTAGATAGGGAATGAACTCCATATG
1 CTTAGATAGGGAATGAACTCCATATG
19104933 C
1 C
19104934 CTAACTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGATAGGGAATGAACTCCATATG
Found at i:19105807 original size:26 final size:26
Alignment explanation
Indices: 19105771--19105823 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19105761 CCAGTCTGAT
19105771 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19105797 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19105823 C
1 C
19105824 GTACGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19108491 original size:26 final size:26
Alignment explanation
Indices: 19108462--19108514 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19108452 CCGATTCGAT
19108462 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
19108488 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
19108514 C
1 C
19108515 CAAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:19109363 original size:26 final size:26
Alignment explanation
Indices: 19109333--19109385 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19109323 CCGGTCAGAT
* *
19109333 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
19109359 CTTAGACTAGGAATGAACTGCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
19109385 C
1 C
19109386 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:19110260 original size:26 final size:26
Alignment explanation
Indices: 19110224--19110273 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
19110214 TCCAGTCGAT
19110224 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19110250 CTTAGACTGGGAATGAACTGCGTA
1 CTTAGACTGGGAATGAACTCCGTA
19110274 CGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.18, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19111136 original size:26 final size:26
Alignment explanation
Indices: 19111107--19111159 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19111097 CTAATCTGAT
* *
19111107 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
19111133 CTTAGATTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
19111159 C
1 C
19111160 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:19113819 original size:26 final size:26
Alignment explanation
Indices: 19113767--19113819 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19113757 CTGATCCGAT
* *
19113767 CTTAGACTGGGAATGAACTCTGCATG
1 CTTAGACTGGGAATCAACTCCGCATG
* *
19113793 CTTAGATTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGCATG
19113819 C
1 C
19113820 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGCATG
Found at i:19115612 original size:26 final size:26
Alignment explanation
Indices: 19115576--19115625 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
19115566 GTCCGATCAC
*
19115576 AGACTGGGAATGAACTTCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
19115602 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
19115626 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.18, G:0.28, T:0.26
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:19115980 original size:904 final size:901
Alignment explanation
Indices: 19108784--19129221 Score: 16518
Period size: 903 Copynumber: 22.6 Consensus size: 901
19108774 CACATCTTCA
*
19108784 TATGGC-TATAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * **
19108848 CGTTTTCTATTTTTCACAATTTTCGAAACTTTTTGCGATTCGAGATTTTTTAAAATTTTTTCAAA
66 CGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * *
19108913 AGGA-TTTTTGGCCCCAAACTTGGTAGATGTGGTCCTTTTATTTTT-TATGGCATGCACAAAAAA
130 AGGAGTTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCAC-AAAAA
* *
19108976 AATTCATCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
192 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
19109041 GACACTTTAATGGCTGCTGGTAGCAAACCTATAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
257 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
19109105 TCTCGAGGTTTGATGAGGGATAGGCGGCCAATATAAGTGCCAAGTACTAGCACCCATCGCACATC
322 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
19109170 ATGTGTGCACACCCCCCCCGGCCCCCTCGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCC
387 ATGTGCGCACA-CCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCC
* * * ** *
19109235 GGTGATGCTCCGACGATGGTGCCTCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAG
450 GGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * *
19109300 CATGTGCTGCCGCAACCCTCGCTCCGGTCAGATCTTAGATTGGGAATGAACTCCGTATGCTTAGA
515 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * *
19109365 CTAGGAATGAACTGCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGGAT-AGTCGGCC
580 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-GCTCAGCCGGCC
* * * ** *
19109429 AGAGGGGCGGGATACGCAAGTCAGGGATCGATCGGGTCCCCCTCTATGTGCTGCCGATCCTGCTA
644 AGAGGGGCGGGATGCGCAAGCCGGGGATCG-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
* * *
19109494 CCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAATTCCGTATGCCTAAGCCAACCGAC
708 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* ** *
19109559 GAAACGAGCGGGCAGGTGGGCGGGCGGGTACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
773 GAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
* *
19109624 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCGTATTTCTGTGTGCCAATGCCATTTT
838 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
19109688 TATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGACTACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
19109753 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTACGGGATTTTTTAAAATTTTTTCGGA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * **
19109818 AGGAGTTTTGGCCCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAGCAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
19109883 TCTA-CTAAAAACTC-AGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
195 TC-AGCTAAAAACTCGA-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
19109946 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAA-GGGGTGTGAGTT
258 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
19110010 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
323 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
19110075 TGTGCGCACACCCCACCCGGCCCCCCGATCGCCGGAACCCTAATGCTGCCGGTCAGGTTCT-C--
388 TGTGCGCACACCCC-CCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGG
** * * * *
19110137 CG--G-T-----GATGGTGCCCCGGTGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAACC
452 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* *
19110194 TGTGCTGCCGCAACCCTCGATCCAGT-CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
517 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * * *
19110258 GGGAATGAACTGCGTACGCCTAAGTCAACCCACGAAAGGAGCATGCGAGCGCTCAGCCAGCCAGA
582 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* ** * * *
19110323 AGGGCGGGATATGCAAGCCGGGGATCGACCGAGTCCCCCTCTGCGTGCTGCCAATCCTGCTGCCG
647 GGGGCGGGATGCGCAAGCCGGGGATCG-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
* * *
19110388 TAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAA
711 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* *
19110453 ACGAGCGGGC-GG-A--CGGGCTGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
776 ACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
19110514 TCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTT-T-C-TG--TATGCCA----
841 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * * *
19110566 -AT-GC-----CATT-TTACAATGGTCCCTTAAGCCTTCTCGCGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
19110623 CGTTTTCCATTTTTCATGATTTTCGAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTTTCGGA
66 CGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * ** * *
19110688 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGAAATACACAAAAATAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * *
19110753 TCTGCTAAAAACTCGAAGTGTACAATATTTTTTGACCATTTGAAAAAAGTGTCCACATTTCAGAC
195 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
19110818 ACTTTAATTGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
19110883 TGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATG
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
*
19110948 TGCGCACACCCCCCCGGCCCCCTCGATCGCCGGAACCCCAATGCCGCCT-GTCAGGTTCTCCGGC
390 TGCGCACACCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCG-CTGGTCAGGTTCTCCGGC
* ** *
19111012 GATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGTAGCACCAGCACATGCCCGAGCCCAGCAA
453 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
** *** * * *
19111077 GTGCTGCCTAAACCCTCGGTCTAATCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGATTG
518 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * *
19111142 GGAATCAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCAGGCACTCAGCCGGCCAGAG
583 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * * ** * *
19111207 GGGTGGGATGCGTAAGCCGGGGATCGGCCGGGT-CCCCTCTACGTGCTATCGATCTTGCTGCCAC
648 GGGCGGGATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * * * *
19111271 AACCCTCGGTCTGATCCAGGTCTTAGACTGGGAATGAACTCCATATGCTTAAGCCAACCGACGAA
712 AACCCTCGGTCCGGTCC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * * * *
19111336 ATGAGTGGGCGGACAGGCGGGGGGGCACAACGTCGGCCAGAGAGACGGGACGCGCAAGCCATGGA
776 ACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
19111401 TCGATAGGGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTAC-TGCCAATCCCATTTT
841 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*
19111461 TGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
19111526 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGATTCGGGATTTTCTAAAATTTTTTCGGA
66 CGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * ** *
19111591 AGGAGTTTTTGCCCCATACTTGGTAGATGCCATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * * * *
19111656 TCAGCTAAAAACTCGAAGTGTGCAAGATTTTGTAACCATTTGAAAAAATTGTCCTCATTTTAGAT
195 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
19111721 ACTTTAATGGGTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAACGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
19111786 CGAGCTTTGATGAGGGATAGGGGGCCAAAATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* *
19111851 TGCGCACA-CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCG-TCGGTCAGGTTCTCCGGTG
390 TGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCT-GGTCAGGTTCTCCGGCG
* *
19111914 ATGCTCTGGAGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
454 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * *
19111979 TGCTGTCACAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-G
519 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
19112043 GAATGAACT-CGTACGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
584 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * * *
19112107 GGCGGGATGTGCAAGTCGGGGATCGGCCAGGTCCCCTTCTGTGTGTTGCCGACCCTGCTGCTGCA
649 GGCGGGATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * *
19112172 ACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAGGCCAACCGACTAAAC
713 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * *
19112237 GAGCGGGTGGGCGGGCAGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
778 GAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
19112302 GATAGGGTGGTAGGTGCGTTT-GGCACATCTTCATATTTGTGTGTGCCAATGCCATTTT
843 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
19112360 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * ** * * *
19112425 CATTTTCT-TTTTTCACGATTTTCAAAACTTTTTGTGATTCGGGATTTTTTAAAATTTTTTCAGA
66 CGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * * * **
19112489 ATGAGTTTTGGCCCTAAACTTGGTAGACGTCATCCTTGTATTTTTGTTGGCATGCACAAATCAAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * *
19112554 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGAGACCATTTTAAAAAATTGTCCCCATTTTAGAC
195 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
19112619 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
19112684 CAAAGTTTGATGAGGGATAGCGGG--ATATGATATGGGCCAAGTACCAGCACCCATCGCACATCA
325 CGAGGTTTGATGAGGGATAGGGGGCCA-AT-ATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
19112747 TATGCGCACA-CCCCCCGG-CCTCCGATC-CCGGAA-CCCAATGTCGCCGGTCAGGTTCT-C--C
388 TGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGC
* * *
19112805 GA--------CGATAGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCTCGAGCCCAGCAT
453 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
*
19112862 GTGCTGCCGTAACCCTCGGT-C--T--GATC-----C----AAT---CT---TA----T--ACTG
518 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * * **
19112901 GGAATGAACTCCGTATGCCTAGGTCAACCCATGAAACGAGTGT-CGAGCGCTCAGTCGGGTAGAG
583 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * * * * *
19112965 GGGCGGCATGTGTAAGTCGGGAATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTACCGC
648 GGGCGGGATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * * * *
19113030 AACCCTCAGTGCGGTCCGATCTTAGACTAGGAATAAACTCCGTATGCCTAAGCCAACCGACAAAA
712 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * ** * * * * *
19113095 TGAGCGGGC-GGCTAGGTGGGCGACCGCTACGTCGGCCGGAGAGACGGGATGCACAAGCCGTGTA
777 CGAGCGGGCGGGC-AGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
**
19113159 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCGCATTTCTGCGTGCCAATGCCATTTT
841 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*
19113220 TATGGCTTGTAAATTCATACAATGGTCCCTTCAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
19113285 CGTTTTCTATTTTTTATGAGTTTTGAGAA-TTTTTACTGTTCGGGATTTTTTAAAATTTTTTCGA
66 CGTTTTCTATTTTTCACGA-TTTTGA-AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGG
* * * * * *
19113349 AAGGAGTTTTGGGCCC-AACTTGGTAGACCTAATCCTTGTATTCTTATTGGCATGCACAAAAAAA
129 AAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
19113413 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGA
194 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
19113478 CATTTTAAAGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
259 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
** *
19113543 TCGAGGTTTGATGAGGGATAGGGGTTCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
324 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
19113608 GTGCGCACACCCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGCAGGTCAGGTTCTCCGACG
389 GTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGCG
** * * * *
19113673 ATGCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGTAAATGCCCGAGCCCAGCAAG
454 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * * *
19113738 TGCTACCTCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCTGCATGCTTAGATTGG
519 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
19113803 GAATCAACTCCGTATGCCTAAGTCAACCCAAGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGG
584 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* ** * * * * * *
19113868 GGTGGGATGCATAAGCCGGGGATCGGTCGAGTCCGCCTCTGTGTGTTGCCGATCGTGCTGCCACA
649 GGCGGGATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * * * *
19113933 ACCCTTGGTCTGGTTCGGTCTTAGACTAGGAATGAACTCCATATGCCTAAGCCAACCGACGAAAT
713 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * * * *
19113998 GAGTGGGCGGACAGGCGGGGGGGCACAACGTCGGCCAGAGAGACGGGACGCGCAAGCTGTGGATC
778 GAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
19114063 GATAGGGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTACATGCCAATGCCATTTT
843 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * * *
19114122 TGTGGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCAAGGCAAGATGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
19114187 TGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * *
19114252 TGGAG-TTTTGTTCCCAAACTTGGTGGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
130 AGGAGTTTTTG-CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* **
19114316 TTCAGCTAAAAACTCGATGTGTACAAGATTTTGTGATAATTTGAAAAAAGTGTCCCCATTTCAGA
194 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
19114381 CACCTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCATATGCTCTTTAAGGGGGTGTGAGTTC
259 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
19114446 TCAAGGTTTAATGAGGGATAGTGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
324 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
19114511 GTGCACACA-CCCCCCGGCCACCCCGATCGTTGGAACCCCAATACCGCCGATCAGGTTCTCCGGT
389 GTGCGCACACCCCCCCGGCC-CCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGC
* * * * *
19114575 GATGCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGTGGCACCAGCACATGCTCGAGCCTAGCAT
453 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * *
19114640 GTGCTGCCGCAACCCTCGGTCCAGTCCAATCTTAGACTGGCAATGAACTCCGTATGCTTGGACTG
518 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * ** *
19114705 GGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGAAGGCGCTCAGCCAGCCAGAG
583 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * ** * *
19114770 GGGTGGGATGCGCAAGCCGGGGATTGACCGGGTCCCCCTCTGTATGTTGCCGATCCTGCTGCCAC
648 GGGCGGGATGCGCAAGCCGGGGATCG-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
** *
19114835 AACCCTCGGTCTAGT-C-ATCCTTAGACTAGGGAATGAACTCCATATGCCTAAGCCAACCGACGA
712 AACCCTCGGTCCGGTCCGAT-CTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * *
19114898 AATGAGTGGGCGGACAGG-GCGG-GGGCACAACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTG
775 AACGAGCGGGCGGGCAGGCG-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * *
19114961 GATCGATAGGGTGGTAGGTGGGTTTAGGCATATCTTCCATATTTCTACATGCCAATGCCATTTT
839 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT-CATATTTCTGCGTGCCAATGCCATTTT
*
19115025 TGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
19115090 CGTTTTCTATTTTTCACGATTTTAAAACTTTTTACAGTTCGAAATTTTTTAAAATTTTTTCGGAA
66 CGTTTTCTATTTTTCACGATTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAA
** * * **
19115155 GGAGTTTTTGAACCAAACGTGGTAGACGTGATCCTTGAATTTTTACTGGCATGCACAAAAAAATT
131 GGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
19115220 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAAC
196 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-AC
19115285 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
19115350 TGAGGTTTGATGAGGGATAGGAGGCTAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATA
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * **
19115415 TGCGCACACCCCCCGGGCCCCCCGATCGTCGAAACCCCAACGTCGCTGGTCAGGTTCTTTGGCGA
390 TGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGCGA
*
19115480 TGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
455 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
** * ** * ** *
19115545 GCTAACGCAACCCGCAATCTGGTCCGATCACAGACTGGGAATGAACTTCGTATGCTTAGACTGGG
520 GCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * *
19115610 AATGAACTCCGTATGCCTAAGTCAACACACGAAACAAGTGTGCGGGTGCTCAGCCGGCCAGAGGG
585 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * * * *
19115675 GCGAGG-TGCGGTAAGCCGAGGATCAGTCGGGACCCCCTCTACATGCTGCC-ATTCCTGCTGCCG
650 GCG-GGATGC-GCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGA-TCCTGCTGCCG
* * * * *
19115738 CAACCCTCGATCCGATCCAATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAA
711 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* **
19115803 ACGAGCGGGTGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCATTGGA
776 ACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
*
19115868 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTT
841 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
19115929 TATAGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
19115994 AGTTTTCTATTTTTCATGATTTTCAAA------A-GG--C-------------A---TTTC----
66 CGTTTTCTATTTTTCACGATTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAA
*
19116030 --A------GCCCCAAAGTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
131 GGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
*
19116087 CAGCT---AA---GAAGTGTACAAGATTTTGTGACCATTTCAAAAAAAGTGTCCCCATTTCAGAC
196 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCATTTCAGAC
* *
19116146 ACTTAAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
**
19116211 CGAGGTTTGATGAGGGA-AAAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
19116275 TCCGCACACCCCCCCGGCCCCCTCGATCGTCAGAACCCCAATGCTGCCGGTCAAGTTCT-C--CG
390 TGCGCACACCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGCG
* *
19116337 A--------CGATGGTGCCCCGACGAAGAAAAATGCAGCACTAGCACATGCCCGAGCCCAGCATG
454 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * *
19116394 TGCTGCCGTAACCCTCGGTCCGATCTGATCTTAGACTGAGAATGAACTCCGTATGCTTAGACTGG
519 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
19116459 GAATGAAATCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCACTTAGCAGGCTAGAGG
584 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
19116524 GGCGGGATGCGCAAGTCGGGGATCAGTCGGGTTCCCCTCTACGTGCTGCCGATCCTACTACTGCA
649 GGCGGGATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* **
19116589 ACCCTCGGTCCGGTCTGATCTTAGACTATGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
713 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * *
19116654 AAGCGGGC--G--GGCGGGCGGGCGCTACGTCGGCCAGAAAGACGGGATGCACAAGCCGTGGATC
778 GAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * * *
19116715 GATAGGGTGGTATGTGGGTTTAGGTACATCTTCTTATTTCTGCATGCCAATGCCATTTT
843 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*
19116774 TATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * **
19116839 CATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAATATTTTTTCCAA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * ** *
19116904 ATGAGTTTTCGGCCCCAAACTTTCTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
130 AGGAGTTTT-TGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
19116969 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
194 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
19117034 CACTTTAATGGCTACTGGCAGCAAACCTCTAAAAGCTCAAATGCTCTTTAAGGTGGGTATGAGTT
259 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG-GGGTGTGAGTT
* ** ** *
19117099 CTCGAGGTTTGATGAGGGATTGGGGGTTAGGATAAGGACCAAGTACCAGCACCCATCGCACATCA
323 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
19117164 CGTGCGCACACACCCCTCGGGCCCCCCAATCGTCGCAACCCTAATGCCGCCGGTCAGGTTC-CCT
388 TGTGCGCACAC-CCCC-CCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCC-
* * * * * **
19117228 GGTGATGCTCTGACGATGGTGCCCCGGCAAAGAAAAATGTTGCACCAGCACATGCCCGAGCCCAG
450 GGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* *
19117293 CATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
515 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* *
19117358 CTGGGAATGAACTCTGTATGCCTAAGTCAACGCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
580 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * *
19117423 AAGGGGCGGGATGCGCAAGCTGGGGATCAGTCGGGTCCCCCTCTACATGCTGCCGATCCTGCTAC
645 GAGGGGCGGGATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
* * * *
19117488 CGCAACCCTCGATCTGGTCCTATCTTAGA-TAGGGAATGAGCTCCGTATGCCTAAGCCAACCGAC
709 CGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * * *
19117552 GAAACGAGTGGGCGGGCGGGCGAGTGGGCACCACGTCGGCCAGAGAGACGGGCTGCGCAAGCCGT
773 GAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
* *
19117617 GGATCGATAGGGTTGTAGGTGTGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
838 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * * * *
19117681 TCTAGCTTGGAAATTCATACAATGGTCCCCTAAGCCTTCACGTAAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * * *
19117746 CGTTTTCTATTTTTCATGATTTTTGAATCTTTTTGCTGTTCGGGATTTTTTAAAATTTTTTTGGA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * *
19117811 AGGA-TTTTTCCCCCCAAACTTGGTAGACATGATCCTTGCATTTTTGTTGGCATGCACAAAAAAA
130 AGGAGTTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
19117875 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
194 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
19117940 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT-TTTAAAGGGTGTGTGAGTT
259 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTT
19118004 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
323 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** *
19118069 TGTGCGCACACCCCCCTCGGCCCCCCGATCGTCGGAACCCTAATGCCGCCAGTCAGGTTCCCCGG
388 TGTGCGCACACCCCCC-CGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGG
* * * *
19118134 CGATGCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGTA
452 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * *
19118199 TGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGACCTCCGTATGCTTAGACT
517 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* *
19118264 GGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAGCGTGCGGGCGCTCAGCCAGCCAGA
582 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * *
19118329 GGGGCGGGATGCGCAAGCCGAGGATCGGCTGGGTCCCTCTCTGTGTGCTACCGATCCTGCTACCG
647 GGGGCGGGATGCGCAAGCCGGGGATCGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
* * * * * * *
19118394 TAGCCCTCGGTCTGGTCTGATCTTAGACAGGGAATGAACTCTGTATGCCTAAGCCAACTGACGAA
711 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * *
19118459 ACGA------GTG--GGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGTAAGCCGTGGA
776 ACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
19118516 TCGATAGGGTGGTAGGTGGGTTTAGACACATCTTCATATTTCTGCATGCCAATGCCATTTT
841 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*
19118577 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
19118642 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTCGA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGG
* *
19118706 AAGGAG-TTTTGGCCCAAACTTGGTAGACGTGATCCTTGTAATTTTTGTTAGCATGCACAAAAAA
129 AAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGT-ATTTTTGTTGGCATGCACAAAAAA
* *
19118770 ATTCAGCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCTTTTCAG
193 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
19118834 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAA-GGGGTGTCAGTT
258 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
19118898 CTCGAGGTTTGATGAGGGATAGGGGGCCAATACAAGGGCCAAGTACCCGCACCCATCGCACATCA
323 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* **
19118963 TGTACGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCGTTGCCG-TCGGTCAGGTTCT-C--
388 TGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCT-GGTCAGGTTCTCCGG
*
19119024 CGA--------CGA---TGCTCCGACGAAGAAAAATGCGGCACCAGCACAAT-CCCGAGCCCAGC
452 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC-ATGCCCGAGCCCAGC
* * * * * *
19119077 ATGTCCTGTCGCAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGAC
516 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * *
19119142 TGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTTAGCCGGCCAG
581 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * * * *** ** * * *
19119207 AGGGACGGGATGCGCAAACTGGTGATCCT-GCTGTCGATC-CTGC-TGCCACCGGT--TAGGTTC
646 AGGGGCGGGATGCGCAAGCCGGGGATCGTCG-GGTCCCCCTCTGCGTGCTGCCGATCCT-GCTGC
* * *** * * ** *** * ** * **** * * *
19119267 CCCGATGAT-GCTCTGG--CGATGGTCCCCCGATAAAGAAAAATGT-GGCAC-CAGCACATGCC-
709 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC-CTAAGC-CA-ACCG
** * * * * ** ** * *
19119326 -CGAGCCCAGCATGTGCTGCCA--C-AAC---C-CT-CGATCCGATCTGATCTTAGACTGGGAAT
771 ACGAAACGAGC--GGGCGGGCAGGCGGGCGGGCACTACG--CCGGCCAGA---GAGAC-GGG-AT
* ** * * * ** * ** * * * ** * ***
19119382 --G-AACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCA-ACCCACGAAACGAG
827 GCGCAA-GCCG--TGGATCGA-TAGG-GTG--GTAGGT-GGGTTTAGGCACATCTTC-ATA-TTT
* * ***
19119443 CGTGCGGGCGCTCA-GCCGA-CCA
882 C-TGCGTGC-C-AATGCC-ATTTT
* * * * * **** *** ** * * ** * *
19119465 GAGGGGTGGGATGCGCA-AGCCAGGGATCGGTCGGGT-CCCCCTCTATGTGCTGTAGATCCT-GC
1 TATGGCTTGTAAATTCATA--CA---AT-GGTCCCTTAAGCCTTC-ACGTGAAGT--TTCATGGC
** * * * * *** * ** *
19119527 TACCACAAAGCTCAGTTCGGTCTGA-TCTT-A-G-TTTGGGAATGAACTCCGTATGCCT-AAGCC
57 -AAGAC-GA-CTC-GTT--TTCT-ATTTTTCACGATTT-TG-A--AACTTTTTACGGTTCGAG--
** ** * **** * ** ** ** * * *
19119587 AACTGATGAAA--CGAGCGGAAGAGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCC
109 ATTTTTTAAAATTTTTTCGGAAG-GAGTTTTTGC-CCCA-AAC-T-TG---G-TAGAC--G-T--
* * *** * * ***** *** * * * ** *
19119650 GCAAGCCGTGGATCGATAGGGTGGTGG-GTGGGTTTAGGCA--CATCTTCATATTTCTGCA-TG-
160 G--ATCC-TTG-T--AT-TTTTGTTGGCATGCACAAAAAAATTCAGC-TAAAAACTC-GAAGTGT
* * * * * * *
19119710 CCAATGCCATTTTTATG-GC--TTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTAAAGTT
216 ACAA-G--A-TTTTGTGACCATTTG-AAA---A-A-AGT-GTCCCC--A--TTTCA-G-ACACTT
* * * ** * * *** * *** * * *** * * **
19119772 TCATGGC-A-AGAC-G-ACTCGTTTTCTATTTTTCATGATTTTTGAA-GCTTTTTGCTGTTCGAG
264 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTG-AGTTCTCG
** * ** **** * * * * ***** * * *
19119832 ATTTTTTAAAATTTTTTTGGAAGG--ATTTTTCCCCCCAAACTTGGTAGACATG-ATCC-TTGCA
327 AGGTTTGATGA-GGGATAGG-GGGCCAATATAAGGGCC-AA----GTA-CCA-GCACCCATCGCA
* ** ** * ********* * *** * * *
19119893 -TTTTTGTTG-G--CATGCACAAAAAAATTC-AGC-TAAAAACTCGAA----G-T-GTACAAGAT
383 CATCATG-TGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGT-C-AGGT
* ** * * * *** ** **** **
19119946 TTTGTGACCAT--T-TGAAAAAAGTGTCCCC-ATTTCAGACACTTTAAT--GGCTACTGGCAGCA
445 TCTCCGGCGATGCTCCGGCGATGGTG-CCCCGA---C-GA-AGAAAAATGCGGC-ACCAGCA-CA
** * *** * ** **** *** ** * ** * *
19120005 AACCTGTAAAATC-TCAAATGCT-TTTAAAGGGT-GTGTGAGTTCTCGAGGTTTGA-TGAGGGAT
502 TGCCCG--AGCCCAGCATGTGCTGCCGCAACCCTCG-GTCCGGTC-CGATCTTAGACTG-GGAAT
**** * ** ** * * * * ** **
19120066 AGGGGGCCAATATAAAAGCCAAGTACCAGCACCCATCATACAT-CATGTGCGC-ACAACCCCCCC
562 -GAACTCC-GTAT----GCTTAG-ACTGGGA---ATGA-AC-TCCGTATGC-CTA-AGTCAACCC
* **** * ** * * * ***
19120129 GGCCCCCCGATCGT-CAGAACCCTAATGTCGTCGGTCAG-GTTCTCTGGGGATGCTCTGGCGATG
613 -ACGAAACGAGCGTGC-GGGCGCTCA-G-C--CGGCCAGAG-GGGC--GGGATG--C--GC-A--
* ** * ** * * * *
19120192 GTGCCCCGACGAT-GAAAAATACGGCTCCAGCACATGCCCGAGC--CCAGCAT-GTGCTCCCGCA
662 -AG--CCGGGGATCG-----T-CGGGTCCCCCTC-TG--CGTGCTGCC-G-ATCCTGCTGCCGCA
* * * * * * * * *
19120253 ACCCTCGG-CCTGGTCTGATCCTAGACTGGGAATAAACTCCGGATG-CTTAGACTA-GGAATGAA
713 ACCCTCGGTCC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG-ACGAA
* * ** ** * *
19120315 CTCCGTATGCCGAAGTGAACCCACGAAACGAGCATGCGGGCGCT-CAGCCGGCCAGAGGGGA-GG
776 --ACG-A-G-CG--G-G----C-GGGCA-G-GCGGGCGGGCACTAC-GCCGGCCAGA-GAGACGG
* ** ** * * *
19120378 GATACGCAAGCCAG-GGATCGACCGGGTCCCCCTCTATGTGCTGTCGATCCTGCTA-CCACAAAG
824 GATGCGCAAGCC-GTGGATCGATAGGGT-----GGTA-G-G-TG--GGT--T--TAGGCAC--AT
* ** ** * ***
19120441 C-TCGATCCGGTCTGATCTTAGATTGGGAATG-AACTCCG
872 CTTC-AT---AT-T--TC-T-GCGTGCCAATGCCA-TTTT
* * ** * * * *** * *** * * * * *
19120479 TATGCCTAAGCCAACTGATGA-AACGAG--CGGAAGAGCGGGTGGGCGGGCA-CTACGTCGGCCA
1 TATGGCT-TGTAAATTCAT-ACAATG-GTCCCTTA-AGC--CTTCACGTGAAGTTTCAT-GG-CA
** *** * *** ** ** **** *** * * ** * *
19120540 GAGA-GACGGGATCCGCAAGCCGTGGATCGA-TAGGGTGGTGGGT-GGGTT-TAGGCACATCTTC
58 -AGACGACTCG-TTTTCTA-TTTTTCA-CGATTTTGAAACTTTTTACGGTTCGA-G-ATTTTTTA
* * * * * * *** ** * * * *
19120601 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA-TTCATACA-ATGGTCCCT-TA----
117 AAATTTTTTC--G-GAA-G-GAGTTTT-T-GC-CCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *** ** * * * * * *
19120659 ----AGCCTTCACGTGAAGTTTCATGGC-AAGACGACTCGTTTTCTATTTTTCACGATTTT-TGA
174 TGTTGGCATGCACAAAAAAATTCA--GCTAA-A-AACTCG-----AAGTGTACAAGATTTTGTGA
* ** ** *** * * * * * ** * *
19120718 -AACTTT-TTACGA-T-TCGGGATTTTTTA-ATATTTTTTCGAAAGGAGTTTTGGC-CCAAACTT
230 CCA-TTTGAAAAAAGTGTCCCCA--TTTCAGACA--CTTT--AATGG-CTACTGGCAGCAAACCT
** * ** * ** ** ** **** * * * * **** *
19120777 GGTAGACGTGATC-CTTG-TATTTTTGTTGGCATGCA--TAAAAAGATTCAGCTAAAACCTCGAA
287 -GTA-AAAT-CTCAAATGCTCTTTAAGGGGGTGTG-AGTTCTCGAGGTT-TGATGAGGGAT--AG
* ** * ** * * * ** * * *
19120838 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC-CCCATTTCAGACACTTTAATG-GC-TAC
345 GGGGCCAATA-TAAG-GGCCA--AG-TACCA--G-CACCCA--TC-G-CAC-ATCATGTGCGCAC
*** ** *** ***** * * * ** ** * ** * ** *
19120900 TGGCAGCAAACCTATAAAATC-TC-AAATGCTCTTTAACG-GGGTGTGAGTTCTCAAGG-TTTGA
397 ACCCCCCCGGCC-CCCCGATCGTCGGAA-CCCCAATGCCGCTGGTCAG-GTTCTC-CGGCGATGC
* * * * * * * * * * *
19120961 T-GGGGGATAGG-G----GGCCAA-TATAA-G-GGC-CAAGTACCA-GCACCCATCGCACATCAT
458 TCCGGCGAT-GGTGCCCCGACGAAGAAAAATGCGGCACCAGCA-CATGC-CCGA--GCCCAGCAT
* * * *** * * *** * * * * **
19121015 GTG-TG-CACACCCCCCGG-CCCCCCCGATCATCGAAAC-CCCAATG-CCGCTGGTCA-GGTTCT
518 GTGCTGCCGCAACCCTCGGTCCGGTCCGATC-T-TAGACTGGGAATGAACTC-CGT-ATGCTTAG
* ** * * ** * ****
19121074 AC-GGTG-ATG--CTCCGACGATGGTGCCTCGGTGAA--GAAAAATACGA-CACTAGCACATGCT
579 ACTGG-GAATGAACT-C--CG-T-ATGCCTAAGTCAACCCACGAA-ACGAGC-GT-GCGGGCGCT
* * * * * * ** * * *** ** *
19121132 CGAG-C--CCAGCATGTGC--TA-CCGTAACCCTCGG-TCTGGTCCGATCTTAGACTGGGAGTGA
635 C-AGCCGGCCAG-AGGGGCGGGATGCGCAAGCCGGGGATC--GTCGGGTC--CCCCTCTGCGTG-
* ** * ** ** * * * ** * **
19121190 ACT-CCATATGCCTAAATCGACCCACAAAACGAGCGTGCAGGCGCTCAGCTGGCCAAAAGGGCGG
693 -CTGCC-GAT-CCT-GCT-G--CCGCAACCCTCG-GT-C---CGGTCCGAT--CTTAGACTG-GG
* * * * * ** ** * *** ** **
19121254 GATGCGCAAGTCGGGGATCGACC-AGGTCCCCCTCTG-CGTACTGTCGATCCTACTGTAGTAACC
743 AAT--G-AACTC-CGTAT-G-CCTAAG-CCAAC-C-GACG-A--AACGAGCGGGC-G--GGCAGG
*** * * ** ** * * ***
19121317 CTTAATTCGGTCCGATCTTA-GACTGGGAATGA-ACTCCGTATGC-CTAAGCCAACCGA-CGAAA
793 C---GGGCGG-GC-A-C-TACG-CCGGCCA-GAGAGACGGGATGCGC-AAGCC-GTGGATCG--A
* ** * * * **** ** ** * * *
19121378 TGAGCG-GGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAACGATAGG
845 T-AGGGTGGTAGGTGGG---T--TTAGG-CACATCTTC-ATAT-TTC-TG-CGT-G--CCA-ATG
** **
19121442 GTAGTAGT
895 CCA-TTTT
* * * * *** * * * *
19121450 T-GGGTTTAGGTACATCTTCTTATTTCTGTGTGCC--AATGCCATTTTTATGGCTTGTAA-ATTC
1 TATGGCTT--GTA-A-ATTCATA-CAATG-GTCCCTTAA-GCC---TTCA---CGTG-AAGTTTC
* ** * *** *** *
19121511 AT-ACAATG--G--TC-CCTT-AAGCCTTCACGTGAAGTTTCATGGCAAGAC-GACT-CGTTTTC
52 ATGGCAA-GACGACTCGTTTTCTATTTTTCAC--G-A-TTT--T-G-AA-ACTTTTTACG-GTTC
* ** * * * ****
19121567 TATTTTTCATGATTTTTGAAACATTTTGCGGTTCGAGATTTTTTGAAATTTTT-TTGGAAGGAGT
106 GA-GATT------TTTT-AAA-ATTTT----TTCG-GA-----AGGAGTTTTTGCCCCAA--A--
* ** * * *
19121631 TTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAAAAAAAATTCAGCTA
148 CTTG---GTAG--------ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* * *
19121696 AAAACTCGAACTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
202 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
19121761 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTT
267 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * *
19121826 TGATGAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCGC
332 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * *
19121891 A-CCCCCCGACCCCCCGATCGTCGAAACCCCAATGTCGCTGGTCAGGTTCTCCGGCGATGCTCCG
397 ACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGCGATGCTCCG
* * * * * *
19121955 ACGATGGTGCCCCGGCAAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCCAGCTTGTGCT-AC
462 GCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG-CCCAGCATGTGCTGCC
** * * *
19122019 TTAA-CCTCGGTTCGGTCCGATCTTTAGCCTGGGAATGAACTCCGTATGCTTAGACTGGGAGTGA
526 GCAACCCTCGGTCCGGTCCGATC-TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * *
19122083 ACTCCCGTATG-CTAAGTCAATCAACAAAAACGAGCGTGCGGGTGCTCAGCCGGCCAAAGGGGCT
590 ACT-CCGTATGCCTAAGTCAACCCAC-GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* * * * * * * ** * *
19122147 GGATGCGTAAGCCGAGGATCGACCAGGTCTCCCTTTGCATGCTATCGATCCTGCTACCGTAAACC
653 GGATGCGCAAGCCGGGGATCG-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG-CAACC
* * * * * ** * *
19122212 TTGATCTGGTCTGGTCTGATCTTAGAATGGGAATGAATTCTATATACCTAAGCCAACCGATG-AA
716 ---CTC-GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*** * * * *
19122276 CGAAGCGAAAGGGCGGGCGGGCGGGTACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGGGGA
777 CG-AGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
19122341 TCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGTGTGCCAATGCCATTTT
841 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * * *
19122402 TGTGGCTTGTAAATTCATACAATGGACCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
19122467 CGTTTTCTATTTTTCATGATTTTCGAAACATTTTGCGGTTCGTA-ATTTTTTGAAATTTTTTCGG
66 CGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCG-AGATTTTTTAAAATTTTTTCGG
** * *
19122531 AAGGAG-TTTTGCCCCAAACTTTTTAAACGTGATCCTTGTAGTTTTGTTGGCATGCACAAAAAAA
129 AAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * *
19122595 TTCAGCTAAAAACTCGTAGTGTACAAGATTTTGTCACCATTTGGAAAAAGTGTCCCCATTTTAGA
194 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
19122660 CAATTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGAGTGAGTTC
259 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
19122725 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCACACATCAT
324 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * * * *
19122790 GCGCGCACACCCCCACTAGCACCCCCAATCATCGAAACCCCAA--CAC-C--GTCA-G---T-CA
389 GTGCGCACACCCCC-CCGGC-CCCCCGATCGTCGGAACCCCAATGC-CGCTGGTCAGGTTCTCCG
* * * * * *
19122845 G-G-TTCTCCGGC-AT--TGCTCCGACGAAGAAAAAGGCTGCACCAGCACATGCCTGAGCCTAGC
451 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * *
19122905 ATGTGCTGGCACAACCCTCGGTCCTGTTCGATCTTAGACTGGGAATGAACTCCATATGCTTAGAC
516 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * * *
19122970 TGGGAATGAACTCCGCATGCCTGAGTCAACCCACGAAACAAGCGTGCGGGCACTCAGCCAGCCAG
581 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * * * * * *
19123035 AAGGGTGGGCTACGTAAGCCAGGGATCGGTCAGGTCCCCCTCTGTGTGCTGCCTATCCTGCTGCC
646 AGGGGCGGGATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCC
* * * * * *
19123100 GTAACCCTTGTTTCGATCCGATCTTAG-CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAA
710 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * *
19123164 AATGAGCGGGC--G--GGCGGGCGGGCATTACGCCGGTCAGAGAGACGGGATGCGCAAGCCGTGG
775 AACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
*
19123225 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
840 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*
19123287 TATGGCTTGTAAATTCATACTATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
19123352 CGTTTTCTATTTTTCATGATTTTTGAAACATTTTGCGGTTCGAGATTTTTTGAAATTTTTTTGGA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* *
19123417 AGGAG-TTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAAAAAAAAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
19123481 TCAGCTAAAAACTCGAACTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAAAC
195 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
19123546 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
19123611 CGAGGTTTGATGAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* *
19123676 TGCGCACA-CCCCCCGGGCCCTCGATCGTCGGAACCCCAATGCCG-TCGGTCAGGTTCT-C--CG
390 TGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCT-GGTCAGGTTCTCCGGCG
* * *
19123736 A--------CGATTGTGCCCCGACGAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGTATG
454 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
** * *
19123793 TGCTATCGCAACCCTCGATCCAGTCC-ACTCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-
519 TGCTGCCGCAACCCTCGGTCCGGTCCGA-TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* *
19123856 AGAATTGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGA
583 GGAA-TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * * * *
19123921 GGGGCAGGATGCACAAGCCGGGGATCGACCGGGTACCCCTCTGCATGCTACCGATGCTGCTGCCA
647 GGGGCGGGATGCGCAAGCCGGGGATCG-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
** * * *
19123986 CAACCCTCAATCCAGTCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAA
711 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* ** * * * *
19124051 A--A------GTGTTGGCGGGCGGGCACTACCCCGACCAGAGAGACGAGATGCGCAAGCCATGGA
776 ACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
19124108 TCGATAGGGTGGTAGGTGGGTTTAGGCTCATCATCATATTTCTGCATGCCAATGCCATTTT
841 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
19124169 TATGGCTTGTAAATTCATACTATGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * ** * *
19124234 CATTTTCTGTTTTTCACGATTTTCAAAACTTTTTGTGGTTTGAGATTTTTTTAAATTTTTTCGGA
66 CGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * * * * *
19124299 TGGAATTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAACAAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * *
19124364 TCAGCTAAAAACTCAAACTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAG
195 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
19124429 ACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
19124494 TGAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCACACATCATG
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * * ** *
19124559 TGCGCACA-CCCCCCGGCCCTCCGATCATTGAAACCCCGATGCCG-TCGGTCAGGTTCTTTGGTG
390 TGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCT-GGTCAGGTTCTCCGGCG
* * * * * * ** * * *
19124622 ATGCTCAGACGATAGAGTCTCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCAAGTATG
454 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
** * * *
19124687 TGCTGCCGCAACCCTCAATCCGGTCCGATCCTAGACTGAGATTGAACTCC----G--TAGACTGG
519 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
19124746 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGG
584 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
19124811 GG-GGGATGCGTAAGCCGGGGATCAG-CTGGGTCCCCCTCTGCATCCTCCCGATCCTGCTACCGT
649 GGCGGGATGCGCAAGCCGGGGATC-GTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * * * * * **
19124874 AACCTTCAG-CTGGTCTGATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGCGAACTAACGAAA
712 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
** *
19124938 CGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGGTAGAGAGACAGGATGCGCAAGCCGTGGAT
777 CGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
*
19125003 CGATAGTGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
842 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
19125063 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGAAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
19125128 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTACGAGATTTTTTAAAATTTTTTCGAA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
** * * *
19125193 AGGAGTTTTCACCGCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAACAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
19125258 TCAGTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATATCAGAC
195 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * *
19125323 ACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTTAGATGCTCTTTAAGGGGATGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
19125388 CAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGGACCACCACCCATCGTACATCATG
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* ** * * * * *
19125453 TGCGCACA-CCCCCTGGCCCCCCGATCACCGAAACCCCAATTCCGCCGGTCAGGTTCTTCGACGA
390 TGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGCGA
* * * * *
19125517 TGCTCCAGTGATGGTGCCCCAACGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGT
455 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* **
19125582 GCTGCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTATGTATGCTTAGACTGGG
520 GCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
19125647 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
585 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * *** * * ** *
19125712 GCGGGATGCGCAAGCCGGGGATCGACCGAGTCCCCCTCTATATGCTACCGATCCTACTATCGTAA
650 GCGGGATGCGCAAGCCGGGGATCG-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAA
* * *
19125777 CCCTCGGTCTGGTCCTATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACG
714 CCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* *
19125841 AGCGGGC--G-A---------GCACTACGCCGGCCAGAGAGACGGGATGCTCAAGCTGTGGATCG
779 AGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * *
19125894 ATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGACAATGCCATTTT
844 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * *
19125952 TATGGCTTGTCAATTCATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
** * *
19126017 CGTTTTCTATTTTTCACGATCTTCAAAACTTTTTGCGGTTC-AGGATTTTTTAAAATTTTTTTGG
66 CGTTTTCTATTTTTCACGAT-TTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGG
* * * * *
19126081 AAGG-CTTTTTGGCTCGAAACTTGGTAGACGTGATCCTTTTATTTTTTTTTGGCATGCACAAAAA
129 AAGGAGTTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAA
*
19126145 AATTCAGCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
192 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * * *
19126210 GACATTTTAATGGTTACTGGGAGGAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGT
257 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
19126275 TCTTGTGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATTC-CACAT
322 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-TCGCACAT
* * *
19126339 CATGTGCGCACACCCCCGCCGGCCACCCTGATCGCCGGAACCCCAATGCTG-TCGGTCAGGTTCT
386 CATGTGCGCACACCCCC-CCGGCC-CCCCGATCGTCGGAACCCCAATGCCGCT-GGTCAGGTTCT
* * * ** * *
19126403 CTGTCGATGCTCCGGCGATGGTGCCCTGGTGAAGAAAAATGTGGCACCAGCACATGGCCGAGCCC
448 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
** * * *
19126468 AGCATGTGCTGCCGCAACCCTCGGTCAAGTCTGATCTTAGGCTGGGAATGAACTCCATATGCTT-
513 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * * * *
19126532 -ACTGGGAATCAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGCTCAACCAGT
578 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * *
19126596 CGGAGGGGCGGGATGCGCAAGCTGGGGATCGGCTGGGTCCCCCTCTGTGTGTTGTCGATCCTGCT
643 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * * * *
19126661 GCCGCAACCCTTGGTCCGATCCAATCTTACACT-GGAATGAACTCCGTATGCCTAAGCCAATCGA
707 GCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* ** *
19126725 CGAAACGAGCGAGCGGGTGGGCGGGCGGGCACTACGCCGACCAGAGAGAC--G--G-G--AGCCG
772 CGAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
19126783 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCGTGACAATGCCATTTT
837 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * * *
19126848 TATGGCTTGTAAATTCATAGAATCGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGATGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
19126913 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGAA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * * *
19126978 AGGA-TTTTTGGCCCCAAACTTTGTAGATGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAACA
130 AGGAGTTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
19127042 TTCAGCTAAAAACTCGAAGTGTACAAGGTTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
194 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
19127107 CACTTTAATGGCTTCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTC
259 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
19127172 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCAT
324 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
19127237 GAGCGCACA-TCCCCTGGACCCCCCTGATCGCCGAAACCCCAATGCCGCTAGTCAGGTTCTCCGG
389 GTGCGCACACCCCCCCGG-CCCCCC-GATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGG
* * * *
19127301 CGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGTGGAACCAGCACATGCGCGAGCCCAGCA
452 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * ** * *
19127366 TGTGCTACCGTAACCGTCAATCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
517 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * * * * *
19127431 GGGAATGAACACCATATGCCTAAGTCAACGCACAAAACGAGCGTGCAGGTGCTCAACCGGCCAAA
582 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * *
19127496 AGGGCGGGATGTGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCG
647 GGGGCGGGATGCGCAAGCCGGGGATCGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
* * ** * ** *
19127561 TAGCCCTTAGTCCGGTCCAATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACCGACGTA
711 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
19127626 ACGAGCGGGCGGGCGGACGGGCGGGTGGGCACTACGTCGGTCAGAGAGACGGGATGTGCAAGCCG
776 ACGAGCGGGCGGGC--A--GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
19127691 TGGAT-GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
837 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
19127755 TATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * * * * * *
19127820 CGTTTTTTATTCTTCATGATTTTCAAAACTTTCTGCGGTTCAAGATTTTTTCAAATTTTTTTGGA
66 CGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * * * *
19127885 AGGTGTTTTGGGCCCAAACTAGGTA-ACGTGATCCTTGT-TTTTTGTTGGCATGCAAAAAAAAAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * * **
19127948 TCAGCTAAAAAAACTCAAAGTGTACAAGA-TTTGTGGCAATTT-AAAAAGGTGTCCCCATACCAG
195 TCAGCT--AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
19128011 ACACTTTAATGGCTACTAGTAGGCAAACCTGATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
258 ACACTTTAATGGCTACTGGCA-GCAAACCTG-TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
19128076 TTCTCGGAGGTTTGATGAAGGGATAGGGGGACCAAATATAGGGGCCAAAGTACCAGCA-CCATCG
321 TTCTC-GAGGTTTGATG-AGGGATAGGGGG-CC-AATATAAGGGCC-AAGTACCAGCACCCATCG
* * * * * ***
19128140 TACATCATGTGCGCACA---CCCTGGCCCCCCCAATC-ACTGAAACACCCAAT-TTTCTCGGTCA
381 CACATCATGTGCGCACACCCCCCCGG-CCCCCCGATCGTC-GGAAC-CCCAATGCCGCT-GGTCA
* * * *
19128200 GGTTCTTCGAC-ATGCT-CGGCTGAT-G-GCCACCG-TGAAGAAAAAT-CGGTA-CAGCACATG-
442 GGTTCTCCGGCGATGCTCCGGC-GATGGTGCC-CCGACGAAGAAAAATGCGGCACCAGCACATGC
* * **
19128257 CCGAG-CCAGCA-GTGCTGTCGCCAA-CTTC--TCCAATCCGATCTTAGACTGGGAATGAACTCC
505 CCGAGCCCAGCATGTGCTGCCG-CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
* * * * *
19128317 ATATGCTTAGACTGGGAATGAACTCTGTATGCCTAGGTCAACCCATGAAATGAGCGTGCGGGCGC
569 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
** ** * * * *
19128382 TCATTCGGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGTTGTC
634 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG-TCGGGTCCCCCTCTGCGTGCTGCC
* * ** ** * *
19128447 GATCCTGCTACCGCAACCCTTGGTCCAATCTAATTTTAGACTGGGAATGAACTCCGTACGCCTAA
698 GATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * *
19128512 GCCAACCGATGAAACGAGCGGGC-GG--GG-GGGCGGGCACTATGCTGGCTAGAGAGACGGGTTG
763 GCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* * *
19128573 TGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TACGTGCCAA
828 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
19128637 TGCCATTTT
893 TGCCATTTT
*
19128646 TAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
1 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
19128711 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTTCAGA
66 CGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* * *
19128775 AGGAGTTTTGGCTCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAATAT
130 AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
19128840 TCAGCTAAAAACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGAC
195 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
19128905 ACTTTAATGGCTACTGGCAGGAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
260 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
19128970 CGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
325 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
19129035 TGCGAACGCGCCACCCTGGCCCCCCGATCGTTGGAACCCCAATGCTG-TCGGTCAGGTTCTCCGG
390 TGCGCACAC-CC-CCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCT-GGTCAGGTTCTCCGG
** ** *
19129099 CGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGGA
452 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * ** ** *
19129164 TTTACTGCCGCAACCCTCAATCCAATCGGATCTTAGACTGGGAATGAACTCCGTATGC
517 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
19129222 CTAAGCCAAC
Statistics
Matches: 15798, Mismatches: 2775, Indels: 1927
0.77 0.14 0.09
Matches are distributed among these distances:
845 178 0.01
846 7 0.00
847 1 0.00
849 109 0.01
850 168 0.01
852 1 0.00
853 2 0.00
855 1 0.00
858 9 0.00
859 209 0.01
860 424 0.03
861 198 0.01
862 36 0.00
863 4 0.00
864 25 0.00
865 1 0.00
867 59 0.00
868 1 0.00
869 4 0.00
870 274 0.02
871 136 0.01
872 19 0.00
873 4 0.00
874 12 0.00
875 76 0.00
876 11 0.00
877 10 0.00
878 14 0.00
879 191 0.01
880 14 0.00
881 9 0.00
882 356 0.02
883 459 0.03
884 146 0.01
885 704 0.04
886 128 0.01
887 232 0.01
888 99 0.01
889 386 0.02
890 391 0.02
891 662 0.04
892 248 0.02
893 206 0.01
894 930 0.06
895 430 0.03
896 760 0.05
897 86 0.01
898 331 0.02
899 544 0.03
900 137 0.01
901 348 0.02
902 643 0.04
903 1712 0.11
904 786 0.05
905 391 0.02
906 228 0.01
907 684 0.04
908 48 0.00
909 50 0.00
910 22 0.00
911 34 0.00
912 12 0.00
914 1 0.00
915 2 0.00
916 3 0.00
917 8 0.00
918 14 0.00
919 8 0.00
920 9 0.00
921 10 0.00
922 4 0.00
923 1 0.00
924 3 0.00
925 3 0.00
926 13 0.00
927 2 0.00
928 19 0.00
929 8 0.00
930 26 0.00
931 9 0.00
932 22 0.00
933 2 0.00
934 9 0.00
935 8 0.00
936 4 0.00
937 4 0.00
938 3 0.00
940 8 0.00
941 17 0.00
942 33 0.00
943 19 0.00
944 8 0.00
945 7 0.00
946 3 0.00
947 5 0.00
948 10 0.00
949 11 0.00
950 5 0.00
951 3 0.00
952 3 0.00
953 10 0.00
954 11 0.00
955 10 0.00
956 16 0.00
957 8 0.00
958 6 0.00
959 4 0.00
960 13 0.00
961 3 0.00
962 10 0.00
963 7 0.00
964 3 0.00
965 2 0.00
966 9 0.00
967 12 0.00
968 12 0.00
969 28 0.00
970 20 0.00
971 16 0.00
972 15 0.00
973 13 0.00
974 13 0.00
975 8 0.00
976 14 0.00
977 27 0.00
978 18 0.00
979 18 0.00
980 17 0.00
981 12 0.00
982 20 0.00
983 12 0.00
984 10 0.00
985 30 0.00
986 16 0.00
987 22 0.00
988 13 0.00
989 27 0.00
990 45 0.00
991 30 0.00
992 25 0.00
993 14 0.00
994 17 0.00
995 13 0.00
996 33 0.00
997 40 0.00
998 50 0.00
999 36 0.00
1000 11 0.00
1001 31 0.00
1002 19 0.00
1003 28 0.00
1004 33 0.00
1005 17 0.00
1006 22 0.00
1007 14 0.00
1008 8 0.00
1009 13 0.00
1010 12 0.00
1011 13 0.00
1012 10 0.00
1013 13 0.00
1014 13 0.00
1015 5 0.00
1017 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (901 bp):
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAA
GGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGGCGAT
GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
CGGGATGCGCAAGCCGGGGATCGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
CTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
CGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
Found at i:19116452 original size:26 final size:26
Alignment explanation
Indices: 19116423--19116475 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19116413 CCGATCTGAT
*
19116423 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAAATCCGTATG
*
19116449 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGAGAATGAAATCCGTATG
19116475 C
1 C
19116476 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAAATCCGTATG
Found at i:19117355 original size:26 final size:26
Alignment explanation
Indices: 19117326--19117378 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19117316 CCGATCCGAT
19117326 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
19117352 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19117378 C
1 C
19117379 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19118259 original size:26 final size:26
Alignment explanation
Indices: 19118230--19118282 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19118220 CCGATCCGAT
*
19118230 CTTAGACTGGGAATGACCTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19118256 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
19118282 C
1 C
19118283 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:19119160 original size:26 final size:26
Alignment explanation
Indices: 19119109--19119161 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19119099 CTGATCCGAT
* *
19119109 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
19119135 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19119161 C
1 C
19119162 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19119397 original size:26 final size:26
Alignment explanation
Indices: 19119368--19119420 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19119358 CCGATCTGAT
*
19119368 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
19119394 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
19119420 C
1 C
19119421 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:19120310 original size:26 final size:26
Alignment explanation
Indices: 19120274--19120324 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
19120264 GGTCTGATCC
*
19120274 TAGACTGGGAATAAACTCCGGATGCT
1 TAGACTAGGAATAAACTCCGGATGCT
* *
19120300 TAGACTAGGAATGAACTCCGTATGC
1 TAGACTAGGAATAAACTCCGGATGC
19120325 CGAAGTGAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.20, G:0.25, T:0.24
Consensus pattern (26 bp):
TAGACTAGGAATAAACTCCGGATGCT
Found at i:19122071 original size:26 final size:27
Alignment explanation
Indices: 19122042--19122095 Score: 83
Period size: 26 Copynumber: 2.0 Consensus size: 27
19122032 GGTCCGATCT
*
19122042 TTAGCCTGGGAATGAACT-CCGTATGC
1 TTAGACTGGGAATGAACTCCCGTATGC
*
19122068 TTAGACTGGGAGTGAACTCCCGTATGC
1 TTAGACTGGGAATGAACTCCCGTATGC
19122095 T
1 T
19122096 AAGTCAATCA
Statistics
Matches: 25, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
26 16 0.64
27 9 0.36
ACGTcount: A:0.22, C:0.22, G:0.28, T:0.28
Consensus pattern (27 bp):
TTAGACTGGGAATGAACTCCCGTATGC
Found at i:19122989 original size:26 final size:26
Alignment explanation
Indices: 19122937--19122989 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19122927 CCTGTTCGAT
*
19122937 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCACATG
*
19122963 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCACATG
19122989 C
1 C
19122990 CTGAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCACATG
Found at i:19123864 original size:26 final size:26
Alignment explanation
Indices: 19123822--19123874 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
19123812 CCAGTCCACT
*
19123822 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
19123848 CTTAGACT-AGAATTGAACTCCGTATG
1 CTTAGACTGAGAA-TGAACTCCGTATG
19123874 C
1 C
19123875 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 3 0.12
26 22 0.88
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:19124743 original size:20 final size:20
Alignment explanation
Indices: 19124718--19124759 Score: 66
Period size: 20 Copynumber: 2.1 Consensus size: 20
19124708 GGTCCGATCC
*
19124718 TAGACTGAGATTGAACTCCG
1 TAGACTGAGAATGAACTCCG
*
19124738 TAGACTGGGAATGAACTCCG
1 TAGACTGAGAATGAACTCCG
19124758 TA
1 TA
19124760 TGCCTAAGTC
Statistics
Matches: 20, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
20 20 1.00
ACGTcount: A:0.31, C:0.19, G:0.26, T:0.24
Consensus pattern (20 bp):
TAGACTGAGAATGAACTCCG
Found at i:19125660 original size:26 final size:26
Alignment explanation
Indices: 19125610--19125662 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19125600 CCGGTCCGAT
*
19125610 CTTAGACTGGGAATGAACTATGTATG
1 CTTAGACTGGGAATGAACTACGTATG
*
19125636 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTACGTATG
19125662 C
1 C
19125663 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:19127433 original size:26 final size:26
Alignment explanation
Indices: 19127397--19127449 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19127387 CTGGTTCGAT
* *
19127397 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACACCATATG
19127423 CTTAGACTGGGAATGAACACCATATG
1 CTTAGACTGGGAATGAACACCATATG
19127449 C
1 C
19127450 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACCATATG
Found at i:19127962 original size:907 final size:901
Alignment explanation
Indices: 19121174--19129221 Score: 9987
Period size: 894 Copynumber: 9.0 Consensus size: 901
19121164 CTGGTCCGAT
* * * * * *
19121174 CTTAGACTGGGAGTGAACTCCATATGCCTAAATCGACCCACAAAACGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
19121239 TGGCCAAAAGGGCGGGATGCGCAAGTCGGGGATCGACCAGGTCCCCCTCTGCGTACTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* *** * *
19121304 TACTGTAGTAACCCTTAATTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGTAACCCTTAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
19121369 CCGACGAAATGA----GC-GGGC--G-GGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGGGCGGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * * *
19121426 GCCGTGGAACGATAGGGTAGTAGTTGGGTTTAGGTACATCTTCTTATTTCTGTGTGCCAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
19121491 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
19121556 GACTCGTTTTCTATTTTTCATGATTTTTGAAACATTTTGCGGTTCGAGATTTTTTGAAATTTTTT
391 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTT
* * *
19121621 TGGAAGGAGTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAAAAAA
456 CGGAAGGAGTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
19121686 AATTCAGCTAAAAACTCGAACTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCA
521 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
19121751 AACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGT
586 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
19121816 TCTCGAGGTTTGATGAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
651 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
19121881 ATGTGTGCGCACCCCCCGACCCCCCGATCGTCGAAACCCCAATGTCG-CTGGTCAGGTTCTCCGG
716 ATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTC-GGTCAGGTTCTCCGG
* * *
19121945 CGATGCTCCGACGATGGTGCCCCGGCAAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCCAGC
780 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAG-CCCAGC
* * ** * * * *
19122010 TTGTGCT-ACTTAA-CCTCGGTTCGGTCCGATCTTTAGCCTGGGAATGAACTCCGTATG
844 ATGTGCTGCCGCAACCCTCGATCCGGTTCGATC-TTAGACTGGGAATGAACTCCGTATG
* * * * *
19122067 CTTAGACTGGGAGTGAACTCCCGTATG-CTAAGTCAATCAACAAAAACGAGCGTGCGGGTGCTCA
1 CTTAGACTGGGAATGAACT-CCGTATGCCTAAGTCAACCCAC-GAAACGAGCGTGCGGGCGCTCA
* * * * * * * * *
19122131 GCCGGCCAAAGGGGCTGGATGCGTAAGCCGAGGATCGACCAGGTCTCCCTTTGCATGCTATCGAT
64 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * * * ** *
19122196 CCTGCTACCGTAAACCTTGATCTGGTCTGGTCTGATCTTAGAATGGGAATGAATTCTATATACCT
129 CCTGCTACCGTAACCCTT-A----GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
* *** * *
19122261 AAGCCAACCGATG-AACGAAGC-GAAAGGGCGGGCGGGCGGGTACTACGCTGGCCAGAGAGACGG
189 AAGCCAACCGACGAAACG-AGCGGGCGGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGACGG
* * *
19122324 GATGCGCAAGCCGGGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGTGTG
252 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTG
* * *
19122389 CCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGACCCCTAAGCCTTCACGTGAAGTTTCA
317 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * *
19122454 TGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCGAAACATTTTGCGGTTCGTA-ATTTTTT
382 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCG-AGATTTTTT
* ** * *
19122518 GAAATTTTTTCGGAAGGAGTTTTGCCCCAAACTTTTTAAACGTGATCCTTGTAGTTTTGTTGGCA
446 AAAATTTTTTCGGAAGGAGTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
19122583 TGCACAAAAAAATTCAGCTAAAAACTCGTAGTGTACAAGATTTTGTCACCATTTGGAAAAAGTGT
511 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * * *
19122648 CCCCATTTTAGACAATTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAAG
576 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
19122713 GGGAGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCC
641 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * * ** *
19122778 ATCACACATCATGCGCGCACACCCCCACTAGCACCCCCAATCATCGAAACCCCAACACCGTCAGT
706 ATCGCACATCATGTGCGCACACCCCC-C-GGC-CCCCCGATCGTCGAAACCCCAATGCCGTCGGT
*
19122843 CAGGTTCTCCGGC-AT--T---GC-----T---CCGACGAAGAAAAAGGCT-GCACCAGCACATG
768 CAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG-TGGCACCAGCACATG
* * * * * *
19122893 CCTGAGCCTAGCATGTGCTGGCACAACCCTCGGTCCTGTTCGATCTTAGACTGGGAATGAACTCC
832 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAACTCC
*
19122958 ATATG
897 GTATG
* * * *
19122963 CTTAGACTGGGAATGAACTCCGCATGCCTGAGTCAACCCACGAAACAAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * ** * * * *
19123028 CAGCCAGAAGGGTGGGCTACGTAAGCCAGGGATCGGTCAGGTCCCCCTCTGTGTGCTGCCTATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * *
19123093 TGCTGCCGTAACCCTT-GTTTCGATCCGATCTTAG-CTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTACCGTAACCCTTAG-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
19123156 ACCGACAAAATGAGCGGGC-GGGCGGGC---GGGCATTACGCCGGTCAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAGCGGGCGGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
*
19123217 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
19123282 ATTTTTATGGCTTGTAAATTCATACTATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
19123347 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACATTTTGCGGTTCGAGATTTTTTGAAATTTTT
390 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
* * *
19123412 TTGGAAGGAGTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAAAAA
455 TCGGAAGGAGTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
19123477 AAATTCAGCTAAAAACTCGAACTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
19123542 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
19123607 TTCTCGAGGTTTGATGAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
19123672 CATGTGCGCACACCCCCCGGGCCCTCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT-C--
715 CATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGG
* * * *
19123734 CGA--------CGATTGTGCCCCGACGAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGTA
780 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCA
** * *
19123791 TGTGCTATCGCAACCCTCGATCCAG-TCCACTCTTAGACTGGGAATGAACTCCGTATG
845 TGTGCTGCCGCAACCCTCGATCCGGTTCGA-TCTTAGACTGGGAATGAACTCCGTATG
* *
19123848 CTTAGACT-AGAATTGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
1 CTTAGACTGGGAA-TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * ** *
19123912 CCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTACCCCTCTGCATGCTACCGATG
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATC
* ** * * * *
19123977 CTGCTGCCACAACCCTCAATCCAGTCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
130 CTGCTACCGTAACCCTTAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * ** * * *
19124042 ACTGACGAAA--A--GTG-TTGGCGGGC---GGGCACTACCCCGACCAGAGAGACGAGATGCGCA
195 ACCGACGAAACGAGCGGGCGGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * *
19124099 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCTCATCATCATATTTCTGCATGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
* *
19124164 ATTTTTATGGCTTGTAAATTCATACTATGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * ** * * *
19124229 CGACTCATTTTCTGTTTTTCACGATTTTCAAAACTTTTTGTGGTTTGAGATTTTTTTAAATTTTT
390 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
* * * *
19124294 TCGGATGGAATTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA
455 TCGGAAGGAGTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * *
19124359 ACAATTCAGCTAAAAACTCAAACTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
19124424 CAGAGACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
19124489 GTTCTTGAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCACACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * **
19124554 TCATGTGCGCACACCCCCCGGCCCTCCGATCATTGAAACCCCGATGCCGTCGGTCAGGTTCTTTG
714 TCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * * * * ** ** * *
19124619 GTGATGCTCAGACGATAGAGTCTCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCAAGT
779 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGC
* * * * *
19124684 ATGTGCTGCCGCAACCCTCAATCCGGTCCGATCCTAGACTGAGATTGAACTCC----G
844 ATGTGCTGCCGCAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
* *
19124738 --TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * **
19124801 CGGCCAGAGGGG-GGGATGCGTAAGCCGGGGATC-AGCTGGGTCCCCCTCTGCATCCTCCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * *
19124864 CTGCTACCGTAA-CCTTCAG-CTGGTCTGATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGCG
130 CTGCTACCGTAACCCTT-AGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * ** *
19124927 AACTAACGAAACGAGCGGGC-GGGCAGGCGGGCGGGCACTACGCCGGGTAGAGAGACAGGATGCG
194 AACCGACGAAACGAGCGGGCGGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGACGGGATGCG
*
19124991 CAAGCCGTGGATCGATAGTGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
258 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
* *
19125056 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGAAA
323 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * *
19125121 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTACGAGATTTTTTAAAATTT
388 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTT
* *
19125186 TTTCGAAAGGAGTTTT-CACCGCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCAC
453 TTTCGGAAGGAGTTTTGC-CC-CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
19125250 AAAAACATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCA
516 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * * * *
19125315 TATCAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTTAGATGCTCTTTAAGGGGATG
581 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * * *
19125380 TGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGGACCACCACCCATCGT
646 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* ** * *
19125445 ACATCATGTGCGCACACCCCCTGGCCCCCCGATCACCGAAACCCCAATTCCGCCGGTCAGGTTCT
711 ACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCT
* * * * * ** *
19125510 TCGACGATGCTCCAGTGATGGTGCCCCAACGAAGAAAAATACGGCACCAGCACATGCCTGAGCCC
776 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* **
19125575 AGCATGTGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTATGTATG
841 AGCATGTGCTGCCGCAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
19125636 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *** **
19125701 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGAGTCCCCCTCTATATGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * ** * *
19125766 TACTATCGTAACCCTCGGTCTGGTCCTATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGTAACCCTTAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
19125830 CAGACGAAACGA---------GCGGGC---GAGCACTACGCCGGCCAGAGAGACGGGATGCTCAA
196 CCGACGAAACGAGCGGGCGGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
19125883 GCTGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGACAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * *
19125948 TTTTTATGGCTTGTCAATTCATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * **
19126013 GACTCGTTTTCTATTTTTCACGATCTTCAAAACTTTTTGCGGTTC-AGGATTTTTTAAAATTTTT
391 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTT
* ** * * * *
19126077 TTGGAAGGCTTTTTGGCTCGAAACTTGGTAGACGTGATCCTTTTATTTTTTTTTGGCATGCACAA
455 TCGGAAGGAGTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAA
*
19126142 AAAAATTCAGCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * * *
19126207 TCAGACATTTTAATGGTTACTGGGAGGAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
19126272 AGTTCTTGTGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATTC-CA
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-TCGCA
* * * *
19126336 CATCATGTGCGCACACCCCCGCCGGCCACCCTGATCGCCGGAACCCCAATGCTGTCGGTCAGGTT
712 CATCATGTGCGCACA-CCCC-CCGGCC-CCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTT
* * * ** *
19126401 CTCTGTCGATGCTCCGGCGATGGTGCCCTGGTGAAGAAAAATGTGGCACCAGCACATGGCCGAGC
774 CTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGC
* ** * *
19126466 CCAGCATGTGCTGCCGCAACCCTCGGTCAAG-TCTGATCTTAGGCTGGGAATGAACTCCATATG
839 CCAGCATGTGCTGCCGCAACCCTCGATCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATG
* * * *
19126529 CTT--ACTGGGAATCAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
19126592 CAGTCGGAGGGGCGGGATGCGCAAGCTGGGGATCGGCTGGGTCCCCCTCTGTGTGTTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * *
19126657 TGCTGCCGCAACCCTTGGTCCGATCCAATCTTACACT-GGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGTAACCCTTAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
19126721 TCGACGAAACGAGCGAGC-GGGTGGGCGGGCGGGCACTACGCCGACCAGAGAGAC--G--G-G--
196 CCGACGAAACGAGCGGGCGGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
19126778 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCGTGACAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
* * *
19126843 ATTTTTATGGCTTGTAAATTCATAGAATCGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
*
19126908 TGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
390 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
* * * * *
19126973 TCGAAAGGATTTTTGGCCCCAAACTTTGTAGATGTGATCCTTGTATTTTTGTTGGCTTGCACAAA
455 TCGGAAGGAGTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
19127038 AACATTCAGCTAAAAACTCGAAGTGTACAAGGTTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
19127103 CAGACACTTTAATGGCTTCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
19127168 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * *
19127233 TCATGAGCGCACATCCCCTGGACCCCCCTGATCGCCGAAACCCCAATGCCG-CTAGTCAGGTTCT
714 TCATGTGCGCACACCCCCCGG-CCCCCC-GATCGTCGAAACCCCAATGCCGTC-GGTCAGGTTCT
* * *
19127297 CCGGCGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGTGGAACCAGCACATGCGCGAGCCC
776 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* * * * *
19127362 AGCATGTGCTACCGTAACCGTCAATCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
841 AGCATGTGCTGCCGCAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
19127423 CTTAGACTGGGAATGAACACCATATGCCTAAGTCAACGCACAAAACGAGCGTGCAGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
19127488 CGGCCAAAAGGGCGGGATGTGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * **
19127553 TGCTACCGTAGCCCTTAGTCCGGTCCAATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAA
131 TGCTACCGTAACCCTTAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
19127618 CCGACGTAACGAGCGGGCGGGCGGACGGGCGGGTGGGCACTACGTCGGTCAGAGAGACGGGATGT
196 CCGACGAAACGAGCGGGC-GG-GG-CGGGCGGG-GGGCACTACGCCGGCCAGAGAGACGGGATGC
*
19127683 GCAAGCCGTGGAT-GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAAT
257 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
*
19127747 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCA
322 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * ** * * *
19127812 AGACAACTCGTTTTTTATTCTTCATGATTTTCAAAACTTTCTGCGGTTCAAGATTTTTTCAAATT
387 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATT
* * * * *
19127877 TTTTTGGAAGGTGTTTTGGGCCCAAACTAGGTA-ACGTGATCCTTGT-TTTTTGTTGGCATGCAA
452 TTTTCGGAAGGAGTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * * *
19127940 AAAAAAATTCAGCTAAAAAAACTCAAAGTGTACAAGA-TTTGTGGCAATTT-AAAAAGGTGTCCC
516 AAAAAAATTCAGCT--AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
** * *
19128003 CATACCAGACACTTTAATGGCTACTAGTAGGCAAACCTGATAAAATCTCAAATGCTCTTTAAGGG
579 CATTTCAGACACTTTAATGGCTACTGGCA-GCAAACCTG-TAAAATCTCAAATGCTCTTTAAGGG
*
19128068 GGTGTGAGTTCTCGGAGGTTTGATGAAGGGATAGGGGGACCAAATATAGGGGCCAAAGTACCAGC
642 GGTGTGAGTTCTC-GAGGTTTGATG-AGGGATAGGGGG-CC-AATATAAGGGCC-AAGTACCAGC
* * * * **
19128133 A-CCATCGTACATCATGTGCGCACA--CCCTGGCCCCCCCAATC-ACTGAAACACCCAATTTTC-
702 ACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTC-GAAAC-CCCAA-TGCCG
* * * * *
19128193 TCGGTCAGGTTCTTCGAC-ATGCT-CGGCTGAT-G-GCCACCG-TGAAGAAAAAT-CGGTA-CAG
763 TCGGTCAGGTTCTCCGGCGATGCTCCGGC-GATGGTGCC-CCGACGAAGAAAAATGTGGCACCAG
* * ** *
19128251 CACATG-CCGAG-CCAGCA-GTGCTGTCGCCAA-CTTC--TCCAATCCGATCTTAGACTGGGAAT
826 CACATGCCCGAGCCCAGCATGTGCTGCCG-CAACCCTCGATCCGGTTCGATCTTAGACTGGGAAT
*
19128310 GAACTCCATATG
890 GAACTCCGTATG
* * * * **
19128322 CTTAGACTGGGAATGAACTCTGTATGCCTAGGTCAACCCATGAAATGAGCGTGCGGGCGCTCATT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * *
19128387 CGGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGTTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * ** ** * *
19128452 TGCTACCGCAACCCTTGGTCCAATCTAATTTTAGACTGGGAATGAACTCCGTACGCCTAAGCCAA
131 TGCTACCGTAACCCTTAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
19128517 CCGATGAAACGAGCGGGCGGGG-GGGC---GGGCACTATGCTGGCTAGAGAGACGGGTTGTGCAA
196 CCGACGAAACGAGCGGGCGGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
19128578 GCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TACGTGCCAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
*
19128642 TTTTTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
19128707 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTT
391 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTT
* *
19128771 CAGAAGGAGTTTTGGCTCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
456 CGGAAGGAGTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
19128836 ATATTCAGCTAAAAACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
19128901 AGACACTTTAATGGCTACTGGCAGGAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
19128966 TTCTCGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
19129031 CATGTGCGAACGCGCCACCCTGGCCCCCCGATCGTTGGAACCCCAATGCTGTCGGTCAGGTTCTC
715 CATGTGCGCACAC-CC-CCC-GGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTC
** *
19129096 CGGCGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCA
777 CGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCA
* * * * **
19129161 GGATTTACTGCCGCAACCCTCAATCC-AATCGGATCTTAGACTGGGAATGAACTCCGTATG
842 GCATGTGCTGCCGCAACCCTCGATCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATG
19129221 C
1 C
19129222 CTAAGCCAAC
Statistics
Matches: 6203, Mismatches: 787, Indels: 324
0.85 0.11 0.04
Matches are distributed among these distances:
877 1 0.00
879 1 0.00
880 1 0.00
881 1 0.00
882 265 0.04
883 285 0.05
884 9 0.00
885 691 0.11
886 121 0.02
887 53 0.01
888 81 0.01
889 318 0.05
890 335 0.05
891 387 0.06
892 126 0.02
893 185 0.03
894 918 0.15
895 319 0.05
896 451 0.07
897 68 0.01
898 8 0.00
899 297 0.05
900 75 0.01
901 127 0.02
902 28 0.00
903 31 0.00
904 10 0.00
905 69 0.01
906 48 0.01
907 724 0.12
908 38 0.01
909 45 0.01
910 42 0.01
911 34 0.01
912 11 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (901 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
TGCTACCGTAACCCTTAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTT
CGGAAGGAGTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGC
GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCAT
GTGCTGCCGCAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:19129949 original size:26 final size:26
Alignment explanation
Indices: 19129913--19129965 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19129903 CCGGTCCGAT
19129913 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
19129939 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
19129965 C
1 C
19129966 CTAGGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19130432 original size:27 final size:26
Alignment explanation
Indices: 19130382--19130462 Score: 87
Period size: 26 Copynumber: 3.1 Consensus size: 26
19130372 GTCCTGTCAA
*
19130382 ATCTTAGACTATGAATGGAA-CTCC-T
1 ATCTTAGACTAGGAAT-GAATCTCCGT
*
19130407 ATGCTTAGACTGGGAAATGAATCTCCGT
1 AT-CTTAGACTAGG-AATGAATCTCCGT
*
19130435 ATCTTAGACTAGGAATGAA-CTTCGT
1 ATCTTAGACTAGGAATGAATCTCCGT
19130460 ATC
1 ATC
19130463 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 4, Indels: 8
0.80 0.07 0.13
Matches are distributed among these distances:
25 10 0.21
26 18 0.38
27 17 0.35
28 3 0.06
ACGTcount: A:0.31, C:0.19, G:0.20, T:0.31
Consensus pattern (26 bp):
ATCTTAGACTAGGAATGAATCTCCGT
Found at i:19131337 original size:26 final size:26
Alignment explanation
Indices: 19131301--19131354 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
19131291 GGTCTGATCT
19131301 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
*
19131327 TAGACTGGGAATGAACTTCGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
19131353 TA
1 TA
19131355 AGTCAACCCA
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCC
Found at i:19133068 original size:26 final size:26
Alignment explanation
Indices: 19133039--19133091 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19133029 CTGATCCGAT
*
19133039 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
19133065 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
19133091 C
1 C
19133092 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:19134290 original size:891 final size:894
Alignment explanation
Indices: 19131833--19138591 Score: 7309
Period size: 891 Copynumber: 7.5 Consensus size: 894
19131823 AAATCATAAA
* * *
19131833 GAAGTGTAC-AG--TTTATGACCATTT-AAAAAAGTGTCCCCATTT-AGACGCTTT-ATTG-TAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
19131891 TGGCAGCACACCTGTAAAAT-TCAAATGC-C-TT------CTGTGAGTTCGT-GAGGTTTGATTA
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-TCGAGGTTTGATGA
* * * * * *
19131946 GGCATA-GGGGCCAATATAAGGGCCAAGT-CTAGCACCTGA-CACACATC-TGTGGGTCAC-CCG
130 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC-CATCGCACATCATGTGCG-CACACCC
* * * * * * *
19132006 TCCG-ACGCCGATCGCCGGAA-CCCAATGCCGCGGTCAGGTTCTCTGG-AATGCTCCGGAGATGG
193 CCCGCCCCCCGATCGCCAGAACCCCAATGCCGCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGG
* * * **
19132068 TG-CCCAACGAAGAAAATAATG-GGCA-CAGCACATG-CCAAGCCTTTTAGCATGTGCTGCC-GG
258 TGCCCCGACGAAG-AAA-AATGCGGCACCAGCACATGCCCGAGCC---CAGCATGTGCTGCCATA
* * * * * * *
19132128 ACCTTGGT-TGATCCAATCTTA-A-T-GGAATGAACGTCCATAATGCCTAGACTTGGAATGAACT
318 ACCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC-TCCGT-ATGCTTAGACTGGGAATGAACT
*
19132189 -CGTATACCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCAGGATG
381 CCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGA--GG--GGATG
* ** * * ** * * *
19132253 TGCAAGCCGGGGATC-AGCCAGG-ACCCCTCTACGTGCTGTTGATTCTACTG-TCGTAACCCTCA
442 CGCAAGCCGGGGATCGA-CTGGGTCCCCCTCTATGTGCTGCCGATCCTATTGCT-GTAACCCTTA
* * *
19132315 GTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGAGC-GA
505 GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
* *
19132379 CGGGTGGGC--G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGA
570 CGGGCGGGCGGGCGAGCACTACG-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
** * *
19132440 TGGTAGGTACGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCTTTTTTATGGCTTGTAAA
634 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* * *
19132505 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACCCATTTTCTATTTT
699 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* ** * * * * *
19132570 TCATAATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTTAAATTTTTTCAGAAGGAATTTTGGCC
764 TCATGATTTTTGAAACTTTTTACGATTCGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
* ** * ** * *
19132635 CTAAACTAAGTAGACATGATCCTTGTATTTTTGCTGGCATGTACAAAAAATTTCAGCTAAAAACT
829 CCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACT
19132700 C
894 C
* * *
19132701 GAAGTGTACAAGATTTTGTGACCATTTTAAAAAATTGTCCCCATTTTAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * * **
19132766 TGGCACCAAACCTGTAAAATCTTAAATGCTCTTTAAAGGGGTGTGAGTTCTTAAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
** * * *
19132831 GGATAGGGGGATATTATACGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCATACCCCCC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * ** *
19132896 GGCCCCCCGATCGTCGGAACCCAAATGCCGCAGGTCAGGTTCTCCAATGATGCTCCGGCGGTGGT
196 -GCCCCCCGATCGCCAGAACCCCAATGCCGC-GGTCAGGTTCTCCGGTGATGCTCCGGCGATGGT
* * * * * * *
19132961 GCCCCGACGAAGAAAAATGCGACACCGGCCCATGCCCAAGCCCAGTAAGTGCTGCCACAACCCTC
259 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCATAA-CCTC
* * *
19133026 GGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATG
323 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* ** *
19133091 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGGTCAGCCGGCCAGAAGGGTGGGATGCGTAAGC
388 CCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAG-A--G-GGGATGCGCAAGC
* * * * ** * ** **
19133156 CGGGGATCGACCGGGTCCCCCTCTGTGTGCTGTCGATCTTGCTACCATAACCCTT-GATTTGGTC
449 CGGGGATCGACTGGGTCCCCCTCTATGTGCTGCCGATCCTATTGCTGTAACCCTTAG-TCCGGTC
* * ** * * *
19133220 TGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCACCCGAAAAAATGAGCGGGCCGACGGG
513 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* * * * *
19133285 CGGGCGGGCATTACGCAGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGATAGCT
578 CGGGCGAGCACTACGC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * * *
19133350 GGGCTTAGGCATATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATTCA
642 GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
*
19133415 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGTAAGACGACTCGTTTTCTATTTTTCATGATT
707 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATT
*
19133480 TTTGAAACTTTTTACTATTCGGAATTTTTTAAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTT
772 TTTGAAACTTTTTACGATTCGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* *
19133544 GGTAGACATGATCCTTGTATTTTTTTTGGCATGCTA-AAAACAATTCAGCTAAAAACTC
837 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGC-ACAAAAAAATTCAGCTAAAAACTC
* * *
19133602 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-AGTCACCATTTCAGACATTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
19133666 TTGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAACGGGGTGTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
*
19133731 GG-TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
** *
19133795 GACCCCCCGATCGCCAGAACCCCAATGCCGCAGGTCAGGTTCTCCGGTGACACTCCGGTGATGGT
196 G-CCCCCCGATCGCCAGAACCCCAATGCCGC-GGTCAGGTTCTCCGGTGATGCTCCGGCGATGGT
* ** *
19133860 GCCTCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCATAACCTCG
259 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCATAACCTCG
* *
19133925 GTCCGGTCCGATCATACACTGGGAATGAAC-CCGTATGCTTAGACTGGGAATGAACT-CGTATGC
324 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * *
19133988 CTAAGTCAACGCACGAAACGAGCGTGCAGGCACTCAGCCGGCTAGA-GGGATGCGCAAGCCGGGG
389 CTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGATGCGCAAGCCGGGG
* * * * * * *
19134052 ATCGACTGGGTACCCCTCTGTGTGCTGCCTATCCTATTGCTGCAACCCTTGGTTCGAT-TGATCT
454 ATCGACTGGGTCCCCCTCTATGTGCTGCCGATCCTATTGCTGTAACCCTTAGTCCGGTCTGATCT
* * * * * * *
19134116 TTGACTGGGAATGAACTCCGTATGGCTAAGCCAACCGATGAAATGAACGGGCTGGGCGGGCAGGT
519 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GGGCGGGCGGGC
* * *
19134181 GAGCACTACGTCGGCCAAAGAAACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGCGTT
583 GAGCACTACG-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
** * *
19134246 TAGGCACATCTTCATATTTCTGTGTGCCAATGCCTTTTTTATGGCTTGTAAATTCATATAATGGT
647 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* ** ** *
19134311 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTTATTTTCTATTTTTCACAATTTTAGA
712 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * *
19134376 AACTTTTTAC-AGTTTGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTA
777 AACTTTTTACGA-TTCGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
19134440 GACGTAATCCTTGTCTTTTTTTTGGCATGCACCAAAAAATTCAGCTAAAAACTC
841 GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
19134494 GAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
19134559 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * *
19134623 GGATAGGGCGCCAATATAAGGGCCAAGTAACAGCACCCATCGAACATCATGTGCGCACACCCCCC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * *
19134688 TGGCCCCCCCGATCGCCGGAACCCTAATGTCGCCGGTCAGGTTCTCCGTTGATGCTCCGGCGATG
196 --G-CCCCCCGATCGCCAGAACCCCAATGCCG-CGGTCAGGTTCTCCGGTGATGCTCCGGCGATG
* * * *
19134753 GTGCCCCAACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATCTGCTGCCGTAACCC
257 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCATAA-CC
* * *
19134818 TC-GTCAGGGTCCAATCTTAGACTGGGAATGAACTCCCTATGCTTAGACTGGGAATGAACTCCGT
321 TCGGTC-CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * *
19134882 ATGCCTAAGTCCAACCCATGAAACGAGCATACGGGCACTCAGCCAGCCAGAGGAGCGGGATGCGC
385 ATGCCTAAGT-CAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCC--A-GAG-GGGATGCGC
* * * * * * * * *
19134947 AAGCTGAGGATCGACCGGGT-CCCCTCTGTGTGTTGCCGATCCTGTTGCAGTAACCC-TCGATCA
445 AAGCCGGGGATCGACTGGGTCCCCCTCTATGTGCTGCCGATCCTATTGCTGTAACCCTTAG-TCC
* *
19135010 GGT-TCGATCTTAGACTGGGAATGAATTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGG
509 GGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * * * * *
19135074 GCGGACGGGTGGGCACTACGCCGACTAGAGAGACGGGATGCGGCAAGCCATGGATCGATAGGGTG
573 GCGGGCGGGCGAGCACTACG-CGGCCAGAGAGACGGGATGC-GCAAGCCGTGGATCGATAGGGTG
**
19135139 GTAGGTGGG-TTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATT
636 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* *
19135203 CATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTC
701 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * *
19135268 ACGATTTTAGAAACTTTTTAC-AGTTTGGGATTTTTTAAAAATTTTTTTGGAAGGAGTTTTGGCC
766 ATGATTTTTGAAACTTTTTACGA-TTCGGAATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCC
* *
19135332 CCAAACTTGGCAGACCGTGATCCCTTGTATTTTTTTCGGCATGCACAAAAAAATTCAGCTAAAAA
829 CCAAACTTGGTAGA-CGTGAT-CCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAA
19135397 CTC
892 CTC
* *
19135400 GAAAGTGTACAAGATTTTATGACCATTTGAAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCT
1 G-AAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
*
19135465 ACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGGTGTGAGTTCTCGAGGTTTGAT
64 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCGAGGTTTGAT
*
19135530 GAGGGATAGGGGGCCAATATAATGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CC
128 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * * * * ** * *
19135594 CCCGGCCCCTGATCACTAGAACCCTAATGCCGTCGGTCAGGTTCTTC-GT-ATGCTTAGAC-TTG
193 CCCGCCCCCCGATCGCCAGAACCCCAATGCCG-CGGTCAGGTTCTCCGGTGATGCTCCGGCGAT-
* * *
19135656 GGAATGAACTCCGTATGCCTAAGTCAACCCACAACGAGCGTGCGGGCACTCAGCCGGCCTAGGGG
256 GG--TG--CCCCG-A---CGAAG---A---A-AA--A---TGC-GGCAC-CAG-C--AC-A----
* ** * * * * * *
19135721 GGCGAGATGCACAAGTCGGGGATCG-GACGGGTCCCTTTACGTGCAGCCGATCCTACTACCGTAA
291 TGCCCGA-GC-CCAG-C----AT-GTG-C---TGCCATAACCT-C-G--G----T-C--CGGT--
* * * *
19135785 CCCTTGGTCCGGTTCGATCTTAGACAGGAATGAATGAACTCCATATGCTTACACTGGGAATGAAC
331 -CC--GAT-C--TTAGA-C-T-G---GGAATGAA----CTCCGTATGCTTAGACTGGGAATGAAC
* * ** *
19135850 TCCGTATGCCTAAGTCAACCCATGAAACGAACATGCGGGCGTTCAGTC-GCCAGAGGGGCAGGAT
380 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGA--GG--GGAT
* * *
19135914 GCGCAAG-CGGGGATCGA-TGGGTCCCCCTCTATGTTCTGCCGATCCTATTGCCGTAACCCTCAG
441 GCGCAAGCCGGGGATCGACTGGGTCCCCCTCTATGTGCTGCCGATCCTATTGCTGTAACCCTTAG
* *
19135977 TCCGGTCTGATCTTAGACTGAGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
506 TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * * * * * * *
19136042 AGGTGGGCGGAC-AGGCACTACGCAAGCCAGCGAGACAGAATGCGCAAG-CAT-GATCGATAGGG
571 GGGCGGGCGGGCGA-GCACTACGC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
* *
19136104 TGGTAGGTGGGTTTAGGCAC-TCTTCATATGTCTGCATGCCAATGCCATTTTCATGGCTTGTAAA
634 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* *
19136168 TTCATACAACGGTCCCTTAAGCCTTCACTTGAAGTTTTCATGGCAAGACGACTCGTTTTCTATTT
699 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTT
*** * * *
19136233 TTCATGATTTGCAAAACTTTTTGCGGTTC-GAGATTTTTTAAAATTTTTTGGGAAGGAGTTTT-G
763 TTCATGATTTTTGAAACTTTTTACGATTCGGA-ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * *
19136296 CGCCAAACTTGGTAGGACGTGAT-CTTGGTATTTTTGTTGACATGCACAAAAAAATTCAGCTAAA
827 CCCCAAACTTGGTA-GACGTGATCCTT-GTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
19136360 AACTC
890 AACTC
* *
19136365 GAAGTGTAGAA-ATTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
19136429 TGGCAGCAAACCTGTAAAATCTCAAATTC-CTTTTAAAGGGGTGTGAGTTCT-GAGGTTTGATGA
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
19136492 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCGCC
130 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CC
* * * *
19136557 CCTGAGTCCCCCGATCACCGGAACCCCAATGCCGGCGGTCAGGTTCTCC-GTGATGCT-CAGCGA
194 CC---GCCCCCCGATCGCCAGAACCCCAATGCC-GCGGTCAGGTTCTCCGGTGATGCTCCGGCGA
* * *
19136620 TGGTGCCTCCGACGAAG-AAAATGAGGCACCAGCACATG-CTGAGCCCAGCATGTG-TATCGCA-
255 TGGTGCC-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GC-CAT
* *
19136681 ACCCTCGGTTTCGGTCC-ATCTTAGACTGGGAATG-ACTTGGCACGTTATGCTTAGACT-GGAAT
317 AACCTCGG-TCCGGTCCGATCTTAGACTGGGAATGAAC-T--C-CG-TATGCTTAGACTGGGAAT
* * * *
19136743 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGTGTACGGGCGCTCAGCCGGCTAGAGGGGCG
376 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGA---G-G
** * * * * * *
19136808 GGACACGCAAGTCAGGGATC-AGTCGGGT-CCCCTCTACGTGCTGTCGATCCTACTGCTGTAACC
437 GGATGCGCAAGCCGGGGATCGACT-GGGTCCCCCTCTATGTGCTGCCGATCCTATTGCTGTAACC
* * * ** ** *
19136871 CTTGGTCCGATCCGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACTAACGAAACGAA
501 CTTAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * *
19136936 CAGGCGGGCGGGCGGGCGAGCACTACGTCGGCTAGAGAGAC-GGATGCGCAAG-TGTGAATC-AC
566 CGGGCGGGCGGGCGGGCGAGCACTACG-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA-
*
19136998 TGGGGTGGTAGGTGGGTTTAGG--CATCTTCATATTT-TGCATGCCAATGCCATTTTTATGGCTT
629 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
* *
19137060 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTTGTTTTCT
694 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * * * *
19137125 ATTTTT-ACGATTTTTGAAAATTTTTGCGATTTGGGATTTTTTTAAAATTTTTTTGGAAGGAG-T
759 ATTTTTCATGATTTTTGAAACTTTTTACGA-TTCGGAATTTTTTAAAATTTTTTCGGAAGGAGTT
* * * *
19137188 TTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTCTTTTGGCAAGCAAAAAAAAATTCAGCTA
823 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
*
19137253 AAAACTT
888 AAAACTC
*
19137260 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * **
19137325 TGGCAGCAAACCTGTAAAGTCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
*
19137390 GGATA-GGGGCCAATATAATGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * * *
19137454 GGCCCCTGATCACCAGAACCCTAATGCCGTCGG-CAGGTTCTTCGGTGATGCTCCGGCAATGGTG
196 GCCCCCCGATCGCCAGAACCCCAATGCCG-CGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTG
* * **
19137518 GCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCTGGCATGTGCTGCC-TCAACCCTC
260 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCAT-AA-CCTC
* * * *
19137582 GGTCTGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATG
323 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * ** * * *
19137647 CCTAAGTCAACCCACGAAATGAGCGTTAGGGCTCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGT
388 CCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGA---G-GGGATGCGCAAGC
** * * * *
19137712 CGGGGATCGA-TCGGGTCCCCCTCTATGTGCT-CTCGATCCTGCTGTTGCAACCCTCAATCCGGT
449 CGGGGATCGACT-GGGTCCCCCTCTATGTGCTGC-CGATCCTATTGCTGTAACCCTTAGTCCGGT
* **
19137775 CTGATCTTAGACTGGGAATGAAGTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGACCGG
512 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * * * *
19137840 ACGGGCGGGTACTACGCTGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGG
577 GCGGGCGAGCACTACGC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
***
19137905 TGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
641 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
19137970 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
706 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
** * * * *
19138035 TTTCAAAACTTTTTGCGGTTCAGG-ATTTTTTAAAATTTTTTCAGAAGGAGTTTT-GACCC-AA-
771 TTTTGAAACTTTTTACGATTC-GGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
19138096 -----AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
835 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
19138151 GAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
19138216 TGGCAGCAAAACTGTAAAATCTCAAAT-TTCTTTGAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* *
19138280 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCGCCCATCACACATCATGTGCGCACAACCCC
130 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCC
* ** * * ** *
19138345 CCGGCCCCCTTTCGCCAGAAACCCAATGCCGCCGATCAGGTTCTCCGACGATGCTCCGACGATGG
194 CCGCCCCCCGATCGCCAGAACCCCAATGCCG-CGGTCAGGTTCTCCGGTGATGCTCCGGCGATGG
* * * * * *
19138410 TGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCGGCATGTCCTATCGCA-ACCC
258 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GC-CATAACC
* * * *
19138474 TCGGTTCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTGGACTGGAAATGAACTCCGTA
321 TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* ** * *
19138539 TGCCTAAGTCAACCCATAAAACGAGCGTGCGGGCGGTCTGCCGGCCAAAGGGG
386 TGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGG
19138592 CNNNNNNNNN
Statistics
Matches: 5032, Mismatches: 621, Indels: 454
0.82 0.10 0.07
Matches are distributed among these distances:
868 9 0.00
869 2 0.00
871 12 0.00
872 17 0.00
873 8 0.00
874 3 0.00
875 21 0.00
876 7 0.00
877 1 0.00
878 2 0.00
883 1 0.00
884 24 0.00
885 19 0.00
886 16 0.00
887 9 0.00
888 1 0.00
889 13 0.00
890 70 0.01
891 485 0.10
892 347 0.07
893 320 0.06
894 221 0.04
895 262 0.05
896 377 0.07
897 297 0.06
898 229 0.05
899 363 0.07
900 95 0.02
901 113 0.02
902 202 0.04
903 222 0.04
904 157 0.03
905 6 0.00
906 82 0.02
907 29 0.01
908 75 0.01
909 6 0.00
910 84 0.02
912 4 0.00
913 3 0.00
915 1 0.00
916 1 0.00
918 1 0.00
919 3 0.00
921 2 0.00
922 2 0.00
923 3 0.00
924 3 0.00
925 5 0.00
926 4 0.00
927 4 0.00
929 1 0.00
930 1 0.00
931 1 0.00
932 3 0.00
933 2 0.00
934 6 0.00
935 3 0.00
936 3 0.00
937 1 0.00
939 1 0.00
940 1 0.00
941 3 0.00
942 2 0.00
943 3 0.00
944 7 0.00
945 8 0.00
948 1 0.00
949 1 0.00
950 2 0.00
951 1 0.00
953 1 0.00
954 1 0.00
955 3 0.00
958 6 0.00
960 72 0.01
961 19 0.00
962 76 0.02
963 20 0.00
964 13 0.00
965 82 0.02
966 27 0.01
967 118 0.02
968 70 0.01
969 20 0.00
970 126 0.03
971 16 0.00
972 28 0.01
973 40 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (894 bp):
GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
GCCCCCCGATCGCCAGAACCCCAATGCCGCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGC
CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCATAACCTCGGT
CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
AAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGATGCGCAAGCCGGGGAT
CGACTGGGTCCCCCTCTATGTGCTGCCGATCCTATTGCTGTAACCCTTAGTCCGGTCTGATCTTA
GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGAG
CACTACGCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
TTTTACGATTCGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
GATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
Found at i:19134869 original size:26 final size:26
Alignment explanation
Indices: 19134833--19134885 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19134823 AGGGTCCAAT
19134833 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
*
19134859 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
19134885 C
1 C
19134886 CTAAGTCCAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:19135970 original size:185 final size:187
Alignment explanation
Indices: 19135642--19136004 Score: 445
Period size: 185 Copynumber: 2.0 Consensus size: 187
19135632 AGGTTCTTCG
* * * *
19135642 TATGCTTAGACTTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAACGAGCGTGCGGGCACTC
1 TATGCTTACACTTGGGAATGAACTCCGTATGCCTAAGTCAACCCAAAACGAACATGCGGGCACTC
* *
19135707 AGCCGGCCTAGGGGGGCGAGATGCACAAGTCGGGGATCGGACGGGTCCCTTTACGTGCAGCCGAT
66 AGCCGGCCTAGAGGGGCGAGATGCACAAGTCGGGGATCGGACGGGTCCCTCTACGTGCAGCCGAT
**
19135772 CCTACTACCGTAACCCTTGGTCCGGT-TCGATCTTAGACAG-GAATGAATGAACTCCA
131 CCTACTACCGTAACCCTCAGTCCGGTCT-GATCTTAGACAGAGAATGAATGAACTCCA
**
19135828 TATGCTTACAC-TGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAACATGCGGGCGT
1 TATGCTTACACTTGGGAATGAACTCCGTATGCCTAAGTCAACCCA--AAACGAACATGCGGGCAC
* * * * * *
19135892 TCAGTC-GCC-AGAGGGGC-AGGATGCGCAAG-CGGGGATC-GATGGGTCCCCCTCTATGTTCTG
64 TCAGCCGGCCTAGAGGGGCGA-GATGCACAAGTCGGGGATCGGACGGGT--CCCTCTACGTGCAG
* * *
19135952 CCGATCCTATTGCCGTAACCCTCAGTCCGGTCTGATCTTAGACTGAGAATGAA
126 CCGATCCTACTACCGTAACCCTCAGTCCGGTCTGATCTTAGACAGAGAATGAA
19136005 CTCTGTATGC
Statistics
Matches: 151, Mismatches: 19, Indels: 14
0.82 0.10 0.08
Matches are distributed among these distances:
183 6 0.04
184 9 0.06
185 97 0.64
186 21 0.14
187 18 0.12
ACGTcount: A:0.24, C:0.27, G:0.28, T:0.21
Consensus pattern (187 bp):
TATGCTTACACTTGGGAATGAACTCCGTATGCCTAAGTCAACCCAAAACGAACATGCGGGCACTC
AGCCGGCCTAGAGGGGCGAGATGCACAAGTCGGGGATCGGACGGGTCCCTCTACGTGCAGCCGAT
CCTACTACCGTAACCCTCAGTCCGGTCTGATCTTAGACAGAGAATGAATGAACTCCA
Done.