Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167915.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_18, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 20765110
ACGTcount: A:0.32, C:0.17, G:0.17, T:0.32
Warning! 90000 characters in sequence are not A, C, G, or T
File 106 of 117
Found at i:19404606 original size:26 final size:26
Alignment explanation
Indices: 19404570--19404622 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19404560 GTTGACTTAG
*
19404570 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19404596 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19404622 G
1 G
19404623 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19405476 original size:26 final size:26
Alignment explanation
Indices: 19405446--19405498 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19405436 GTTGACTTAG
19405446 GCATACAAAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
** * *
19405472 GCATACGGAGTTCGTTCCCAGTTTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
19405498 G
1 G
19405499 ATCGAACCGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAAAGTTCATTCCCAGTCTAA
Found at i:19406566 original size:26 final size:26
Alignment explanation
Indices: 19406530--19406582 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19406520 GTTGACTTAG
* **
19406530 GCATACGGAGTTCATTCCTTGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19406556 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19406582 G
1 G
19406583 ATCGGATCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19407456 original size:26 final size:26
Alignment explanation
Indices: 19407426--19407478 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19407416 GTTGACTTAG
*
19407426 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
*
19407452 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
19407478 G
1 G
19407479 ATCGAATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:19409548 original size:854 final size:858
Alignment explanation
Indices: 19407496--19414755 Score: 8086
Period size: 853 Copynumber: 8.3 Consensus size: 858
19407486 CGGACCGAGG
* * * * *
19407496 GTTTTTGGCTGAATTGTTTTGTGCACGCCAACAAAAATACAAGGATCACATCTACCAACTTTGGG
1 GTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
* * ** *
19407561 GCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAACTCATGAA
66 GCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAA
19407626 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
131 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
*
19407691 TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCAACCAC
196 TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * * **
19407756 CCTATCGATCCACGGCTTGCGTATCCCGTCTCTCTAGCTGGCATAGTGCCCGCCCGCCCGCTTGT
261 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCAT
* * * * *
19407821 TTCGTCGGTTGGCTTAGGCATACGGATTTCATTCCCAGTCTAAGATCGGA-CGGATCGATGGTTG
326 TTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG
* * * * * * *
19407885 CGGTAGTAGGATTGGCAGCACGCAGAAGGGGACCCGGCCGATCCTCGGCTTGCACATCCCACCCC
391 CGGCAGCAAGATTGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCCCGCCCC
* *
19407950 TCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCC
456 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * * *
19408015 AGTCTAAG-AT---TAGA-CCGGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGAATGTGCT
521 AGTCTAAGCATACGGAGATCAGGACCGAGGGTTGCGGCAGCACATGCTGGGCT---GCATGTGC-
* * *
19408075 GGTGCTGCATTTTTCTTCGTCGGGGCACCATCACTGAAGCATCGCCAGAGAACCTGACCGGCGGC
582 --T-C-GTATTTTTCTTCG-CGGGGCA-C--CAC----GCATCGCCGGAGAACCTGACCGACGGC
* * * * *
19408140 TTTGGGGTTCTGACGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTGGGATGGGTGCTAGA
635 ATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* * * *
19408204 ACTTGGCCCTTATATTGACCTCCTATCCCTCATCAAACCTCGAGAACTCACAGCCCCTTAAATAG
700 ACTT-GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
** *
19408269 CATTTGAGATTTTACAGGTCCGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACGTTTTT
764 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACATTTTT
19408334 CAAATGGTCACAAAATCTTGTACACTTCGA
829 CAAATGGTCACAAAATCTTGTACACTTCGA
* *
19408364 GTTTTCT-GCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTTG
1 GTTTT-TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG
* * ** * * *
19408428 GG-CTAAACCCCTTCTGAAAGAATTTTAAAAAATCCTGAACCACAAAAAGTTTCAAAAATCATGA
65 GGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGA
*
19408492 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGGA
130 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
* **
19408557 TTTACAAGCCATAAAAATGGCATTCGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACC-
195 TTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * * * * *
19408621 CCCTATCGATCGACGGCTTGCGTATCCTGTCACTTTGGCTGGCGTAGTGCCCGCCCGCCCAGCCG
260 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCC-G-C-
* * * * * *
19408686 CTCGCTCGTTTCGTCGATTGGCTTAGGCATACAGAGTTCTTTCCCAGTCTAAGATTGGATCGGAC
318 C-CGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC
* * * *
19408751 CGAGGGTTGCGGCAACAAGATTGGCAGCACGCAGAGAGGGACCCGACCGATCCCCGGCTGGCGCA
382 CGAGGGTTGCGGCAGCAAGATTGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCA
* * * * *
19408816 TCCCGCCCTTCTGGCCGGTTGAGCGCCTGCACGCTCGTTTCGTGGGCTGACTTAGGCATACAGAG
447 TCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAG
*
19408881 TTCATTCCCAGTCTAAG-AT-C-G-GATC-GGACCGAGGGTTGCGGCAGCACATGTTGGGCT-CA
512 TTCATTCCCAGTCTAAGCATACGGAGATCAGGACCGAGGGTTGCGGCAGCACATGCTGGGCTGCA
* * * *
19408940 -GTGC-CGTATTTTTCTTTGCCGGG-A-CAC-CATCGCCGGAGAACCTGACTGGCGGCATTGGGG
577 TGTGCTCGTATTTTTCTTCGCGGGGCACCACGCATCGCCGGAGAACCTGACCGACGGCATTGGGG
* * * * *
19409000 TTCCGACGATCAGGGGGCCCAGGGTGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGCC
642 TTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGCC
* * * *
19409065 CTTATATTGGCCTCCTATCCCTCATCAAACCTTGAGGACTCACAGCCCCTTAAAGAGCATTTGAG
707 CTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAG
*
19409130 ATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACATTTTTCAAATGGT
772 ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACATTTTTCAAATGGT
19409195 CACAAAATCTTGTACACTTCGA
837 CACAAAATCTTGTACACTTCGA
* * * * *
19409217 GTTTTTCA-CTGAATGTTTTTATGCATGCCAACAAAAATACAATGATCACGTCTACCAGGTTTCG
1 GTTTTT-AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG
* ** * *
19409281 GGCCAAAACCCCTTCTGAAAGAATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCATGA
65 GGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGA
*
19409346 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTGACGTGAAGGCTTAAGGGACCATTGTATGAA
130 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
** *
19409411 TTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGATGATGTGCCTAAACCCACCTACC-
195 TTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * * *
19409475 CCCTATCGATCCACGGCTTGCGCATCCTGTCACTTTGGCTGGCGTAGTGCCCGTCTGCCCGGCCG
260 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-CC--C-GCCC-GCC-
* * * ** * **
19409540 GTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCTTTCTTAGTCTAAGATTGGACTGGAC
319 --CGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC
*
19409605 CGAGGGTTGCGGCAGCAAGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGC-TGACGC
382 CGAGGGTTGCGGCAGCAAGATTGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTG-CGC
* * * * *
19409669 ATCCCGCCCCTCTGGCCGGCTAAACGCCCACACGCTCGTTTCGTGAGTTGACTTAGGCATACAGA
446 ATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA
** *
19409734 GTTCATTCCCAGTCTAAG-AT-C--AGAT-TTGACCGGGGGTTGCGGCAGCACATG-TGGGCT-C
511 GTTCATTCCCAGTCTAAGCATACGGAGATCAGGACCGAGGGTTGCGGCAGCACATGCTGGGCTGC
* * * * *
19409792 AATG-GCAC--ATTTTTCTTTGCCGGG-A-CAC-CATCGTCGGAGAACCTGACCGACGACATTGG
576 -ATGTGCTCGTATTTTTCTTCGCGGGGCACCACGCATCGCCGGAGAACCTGACCGACGGCATTGG
* * *
19409851 GGTTCTGACGATCGGGGGGGCCAGGGTGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
640 GGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
19409916 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
705 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
19409981 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACATTTTTCAAATG
770 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACATTTTTCAAATG
*
19410046 GTCCCAAAATCTTGTACACTTCGA
835 GTCACAAAATCTTGTACACTTCGA
* * * *
19410070 GTTTTCAGCTGAATTTTTTTGTGTATGCCAACAAAACTACAAGGATCACGTCTAACAAGTTTGGG
1 GTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
*
19410135 GCCAAAACTCCTTCCAAAAAAATTTTAAAAAACCCCGAACCGCAAAAAGTTTCAAAAATCATGAA
66 GCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAA
*
19410200 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGCGAAGGCTTAAGGGACCATTGTATGAAT
131 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
*
19410265 TTACAAGCCATCAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACTC-
196 TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTAC-CA
*
19410329 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGT-GAT----GCCCGCCCGTTC
260 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG-TGCCCGCCCGCCCGCTC
* ** *
19410389 ATTTCGTTGATCAGCTTCGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGT
324 ATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGT
* * *
19410454 TGTC-ACAGCAAGATTGGCAGCA--CATGAAGGGGGACCCGATCGATCCTCGGCTTGTGCATCCC
389 TG-CGGCAGCAAGATTGGCAGCACGCA-G-AGGGGGACCCGACCGATCCTCGGCTTGCGCATCCC
* * * * * *
19410516 GCCCCTCTGGTCGACTGAGCCCCCGTACGCTCGTTTTGTGAGTTGACTTAGGCATACGGAGTTCA
451 GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
*
19410581 TTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGATCGAGGGTTGCGGCA
516 TTCCCAGTCTAAGCATACGGAG---------A-TC----A--GGA-C----CGAGGGTTGCGGCA
*
19410646 GCACATGCTGGGCTCGAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAG
560 GCACATGCTGGGCT---GCATGTGCTCGT-----ATTTTTCTTCG-CGGGGCACCA----C---G
* ** * *
19410711 CATCGCCGGAGAACCTGACCGATGGCATTGGGGTTCCGACGATCAAGGGGGTCGGGGTGGTGTGC
609 CATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGC
19410776 GCACATGATGTGCGATGGGTGCTGGTACTTGCCCATTATATTGGCCCCCTATCCCTCATCAAACC
674 GCACATGATGTGCGATGGGTGCTGGTACTTGCCC-TTATATTGGCCCCCTATCCCTCATCAAACC
*
19410841 TCGAGAAC-CA-ACACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGGCATTA
738 TCGAGAACTCACAC-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
19410904 AAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACACAATCTTGTACACTTCGA
802 AAGTGTCTGAAATGGGGACACATTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
* * *
19410961 GTTTTTAGCTAAATGTTTTTGTGCATGCCAACAAAAATAAAAGGATCACGTCTACCAAGTTTGGG
1 GTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
* *
19411026 GCAAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAA
66 GCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAA
* *
19411091 AAATAGAAAACGAGTCGTCTGGCCATGAAACTTCACGCGAAGGCTTAAGGGACCATTGTATGAAT
131 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
* * *
19411156 TTACAAGCCATCAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACTAC
196 TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * *
19411221 CCTATCGATCCACGACTTGCGCATCCCGTTTCTCTGGGCGGCGT-GAT----GCTCGCCCGCTCA
261 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG-TGCCCGCCCGCCCGCTCA
* *
19411281 TTTCGTCGATCGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
325 TTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * * *
19411346 GTC-ACAGCAACATTGGCAGCACG-TGAAGGGGGACCCGACCGATCCTCAGCTTGCGCATCCCGC
390 G-CGGCAGCAAGATTGGCAGCACGCAG-AGGGGGACCCGACCGATCCTCGGCTTGCGCATCCCGC
* * * * *
19411409 CCCTCTGGCCGACTGAAAC-CCCGTACGCTCGTTTTGTGAGTTGACTTAGGCATACGGAGTTCAT
453 CCCTCTGGCCGGCTG-AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
*
19411473 TCCTAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGATCGAGGGTTGCCGGCA
517 TCCCAGTCTAAGCATACGGAG----------ATC--AG----GA-C----CGAGGGTTG-CGGCA
* * *
19411538 GCACATACTGGCCTCGAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGAAG
560 GCACATGCTGGGCT---GCATGTGCTCGT-----ATTTTTCTTCG-CGGGGCACCA----C---G
* *
19411603 CATCGTCGGAGAACCTGACTGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGC
609 CATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGC
19411668 GCACATGATGTGCGATGGGTGCTGGTACTTGCCCCTTATATTGG--------CCC-C--C-AACC
674 GCACATGATGTGCGATGGGTGCTGGTACTTG-CCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
19411721 TCGAGAAC-CAACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGGCATTA
738 TCGAGAACTC-ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
19411785 AAGTGTCTAAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
802 AAGTGTCTGAAATGGGGACACATTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
* *
19411842 GTTTTTAGCTAAATGTTTTTT-TGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGG
1 GTTTTTAGCTGAAT-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG
* * ** * *
19411906 GGCCAACACTCCTTCCAAAAAAATTTTTAAAAATCCCGAACCATAAAAAGTTTCAAATATCGTGA
65 GGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGA
* *
19411971 AAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCAAGTGAAGGCTTAAGGGACCATTGTATGAA
130 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
* * ** * *
19412036 TTTACAACCCATAAAATTGGCATTGGCATGCACAAATCTGAAGATGTGCCTAAACCCACCTACCA
195 TTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCA
*
19412101 CCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGACCGCCCGTCCG
260 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT--------GCCCG--C-
* * * * *
19412166 TCCGCCCGCTCATTTCGTCGGTTGGCTTGGGCATACGAAGTTCATTCCCAGGCTAGGATCGGACC
314 -CCGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* * * * * * ** *
19412231 AGATCGAGGGTTGTGGTAGCAGGATTGGCAGCACACAGAGGGGGACCTGGTCGATCCCCGGCTTG
378 AGACCGAGGGTTGCGGCAGCAAGATTGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTG
* * *
19412296 CGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCACGCGCTCGTTTCGTGGGTTGACTTAGGCATAC
443 CGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
*
19412361 GGAGTTCATTCCCAGTCTAAGCATACGGATTTCATTCCTAATCTAAGATCGGACTGGACTGAGGG
508 GGAGTTCATTCCCAGTCTAAGCATACGG-----------------AGATC--A--GGACCGAGGG
*
19412426 TTGCGGCAGCACATGCTGGGCTTGGGCATATGCTGGTGCCGTATTTTTCTTCGTCGGGG---CAC
552 TTGCGGCAGCACATGCTGGGC-T--GC--ATG-TGCT--CGTATTTTTCTTCG-CGGGGCACCAC
* * * * * * *
19412488 -CATCACCGGAGAACCTGACTGGCGGCATTAGGGTTTCGGCGATCGAGGGGGCCGGGGGGGTGTG
608 GCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTG
* *
19412552 CGAACATGATGTGCGATGAGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
673 CGCACATGATGTGCGATGGGTGCTGGTACTT-GCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * * *
19412617 CTCAAGAACTCACACCTCCTT-AAGAGCATTTGAGATTTTATAGGTTTGCTGCTAGTAGCCATTA
737 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* * * *
19412681 AAGTATCTGAAATGGGGACACTTTTTTCAAATGGTCGCAAAATCTTGTACACTACGA
802 AAGTGTCTGAAATGGGGACACATTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
* **
19412738 GTTTTTAGCTGAAATTTTTTTGT--ATGCCTACAAAAATACAAGGATCACGTCCCCCAAGTTTGG
1 GTTTTTAGCTG-AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG
* * * * * * *
19412801 GGCCAAAACACCTGCGAAAAAAATTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTTA
65 GGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGA
*
19412866 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAC
130 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
* * *
19412931 TTTACCAGCCATAACAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
195 TTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * **
19412996 CCCTATCGCTCCACGGCTTGTGCATCCCGTCTCTCTATCCGGCGTAGTGCCCGCCCGCCCGCTCA
260 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCA
* * * * *
19413061 TTTCATCGGTTGGCTTAGGCATACGGTGTTTATTCCCAGTCTAAGATCTGACCAGACCGAGGGTT
325 TTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* ** * * * * * * * *
19413126 GCGGTAATAGGATCGACAGCACGTAGAGGGGGACCCGGCCGATCCTCGGCATACACATCCCGCCC
390 GCGGCAGCAAGATTGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCCCGCCC
* * * *
19413191 CTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTAGGTTGACATAGGCATACAGAGTTCATTCC
455 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
*
19413256 CAGTCTAAGCATACGGAGTTCATTCTCAGTCTAAGATTGGACCAGACCGAGGGTTACGGCAGCAC
520 CAGTCTAAGCATACGGAG---------A-TC----A---G----GACCGAGGGTTGCGGCAGCAC
* * *
19413321 ATGCTGGGCTCGAGCAAGTGCTGGTGCCGCATTTTTCTTTGCTGGGGCACCATCGTCGGAGCATC
564 ATGCTGGGCT---GC-A-TG-TGCT--CGTATTTTTCTTCGC-GGGGCACCA----C---GCATC
* *
19413386 ACCGGAGAACCTGACCGATGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCAC
613 GCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCAC
*
19413450 ATGATGTGCGATGGGTGCTGGTACTTGCCCCTTATATTGGTCCCCTATCCCTCATCAAACCTCGA
678 ATGATGTGCGATGGGTGCTGGTACTTG-CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
*
19413515 GAACTCATACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
742 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
*
19413580 TCTGAAATAGGGACAC-TTATTTCAAATGGTCACAAAATCTTGTACACTTCGA
807 TCTGAAATGGGGACACATT-TTTCAAATGGTCACAAAATCTTGTACACTTCGA
* * * * *
19413632 GTTTTCAGCTGAATTTTTTTGTGCACGCCACCAAAAATACAAGGATCACGTCTACTAAGTTTTGG
1 GTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
* *
19413697 GTCAAAACACCTT---AAAAAA---T------T---------------G------------TGAA
66 GCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAA
* * *
19413723 AAATAGAAAATGAGTCGTCTTGCCATAAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGT
131 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
*
19413788 TTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
196 TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * * * *
19413853 CCAATCGATCCACGGCTTGCGCTTCCTGTCTCTCTGGCCGGTGTAGTGCCCG-CCGACCGCTCGT
261 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCAT
* * *
19413917 TTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTGTAAGATTGGACC-GAACCGAGGGTT
326 TTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTT
* *** * * * * *
19413981 GCAGCAGC-AGCATCAACAGCACGTAGAGGGGGACCCGATCGATCCCCGGCTTACGCATCCCACC
390 GCGGCAGCAAG-ATTGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCCCGCC
* * * * *
19414045 CCTCTGGTCGGCTAAGTGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGAAGTTCATTC
454 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
* * *
19414110 CCAGTCTAACCATACTGAGTTCATTCCCAGTCTAAGATCGGATTGAACCGAGGGTTACGGCAGCA
519 CCAGTCTAAGCATAC---G----------G----AGATC--A--GGACCGAGGGTTGCGGCAGCA
* * * * * *
19414175 GATGTTGGGCTCTGGCATGTGCTGGTGCCAGATTTTTATTCGTTGGGG---CAC-CATCGTCGGA
563 CATGCTGGG--CT-GCATGTGCTCGT-----ATTTTTCTTCG-CGGGGCACCACGCATCGCCGGA
* ** *
19414236 GAACATGACC-AGCGATATTGGGGTT-TGAGCGATCGGGGGGGCC-GGGGGGTGTGCGCACATGA
619 GAACCTGACCGA-CGGCATTGGGGTTCCGA-CGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
*
19414298 TGTGCGATGCGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
682 TGTGCGATGGGTGCTGGTACTT-GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* *
19414363 TCACACCCCCTTAGAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCG
746 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
19414428 AAATGGGGACACTTTTTTC-AATGGTCACAACATCTTGTACACTTC-A
811 AAATGGGGACACATTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
**
19414474 CACTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG
1 -GTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG
*
19414539 GGCCAAAACTCCTTCCAAAAAAATTTTAAAAAA-CCCAAACCGCAAAAAGTTTCAAAAATCATGA
65 GGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGA
* * * *
19414603 AAAATCGAAAACGAGTCGTCTTGCCATCAAACTTCATGTAAAGGCTTAAGGGACCATTGTATGAA
130 AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
*
19414668 TTTACAAGCCATTAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCA
195 TTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCA
19414733 CCCTATCGATCCACGGCTTGCGC
260 CCCTATCGATCCACGGCTTGCGC
19414756 CCGCCTTGCG
Statistics
Matches: 5606, Mismatches: 517, Indels: 525
0.84 0.08 0.08
Matches are distributed among these distances:
840 2 0.00
841 1 0.00
842 174 0.03
843 102 0.02
844 199 0.04
845 6 0.00
846 12 0.00
848 1 0.00
849 1 0.00
850 2 0.00
851 2 0.00
852 8 0.00
853 749 0.13
854 547 0.10
855 231 0.04
856 173 0.03
857 2 0.00
858 4 0.00
859 2 0.00
860 2 0.00
862 3 0.00
863 7 0.00
864 12 0.00
865 1 0.00
866 44 0.01
867 176 0.03
868 80 0.01
869 8 0.00
870 12 0.00
871 2 0.00
872 6 0.00
873 4 0.00
874 51 0.01
875 167 0.03
876 3 0.00
878 2 0.00
879 1 0.00
880 23 0.00
881 531 0.09
882 12 0.00
883 253 0.05
884 3 0.00
885 99 0.02
886 3 0.00
887 7 0.00
889 2 0.00
890 3 0.00
891 712 0.13
892 216 0.04
893 110 0.02
894 148 0.03
895 299 0.05
896 146 0.03
897 220 0.04
898 5 0.00
899 3 0.00
901 3 0.00
902 2 0.00
904 4 0.00
906 1 0.00
914 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (858 bp):
GTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
GCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAA
AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCAT
TTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG
CGGCAGCAAGATTGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCCCGCCCC
TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
AGTCTAAGCATACGGAGATCAGGACCGAGGGTTGCGGCAGCACATGCTGGGCTGCATGTGCTCGT
ATTTTTCTTCGCGGGGCACCACGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGA
TCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGCCCTTATATTG
GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACATTTTTCAAATGGTCACAAAATC
TTGTACACTTCGA
Found at i:19410596 original size:26 final size:26
Alignment explanation
Indices: 19410567--19410619 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19410557 GTTGACTTAG
*
19410567 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19410593 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19410619 G
1 G
19410620 ATTGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19411487 original size:26 final size:26
Alignment explanation
Indices: 19411458--19411510 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19411448 GTTGACTTAG
* *
19411458 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19411484 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19411510 G
1 G
19411511 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19412394 original size:26 final size:26
Alignment explanation
Indices: 19412355--19412407 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19412345 GTTGACTTAG
*
19412355 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
19412381 GCATACGGATTTCATTCCTAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19412407 G
1 G
19412408 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.25, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19413002 original size:895 final size:887
Alignment explanation
Indices: 19409799--19414755 Score: 6274
Period size: 891 Copynumber: 5.6 Consensus size: 887
19409789 CTCAATGGCA
* * * ** * *
19409799 CATTTTTCTTTGCCGGGACACCATCGTCGGAGAACCTGACCGACGACATTGGGGTTCTGACGATC
1 CATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
* *
19409864 GGGGGGGCCAGGGTGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTT-GCCCTTATATTGG
66 GGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
19409928 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
131 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* *
19409993 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACATTTTTCAAATGGTCCCAAAATCT
196 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * *
19410058 TGTACACTTCGAGTTTTCAGCTGAATTTTTTTGTGTATGCCAACAAAACTACAAGGATCACGTCT
261 TGTACACTTCGAGTTTTTAGCTGAAATTTTTT-TGTATGCCAACAAAAATACAAGGATCACGTCT
* * *
19410123 AACAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAACCCCGAACCGCAAAAAGTTTC
325 ACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTC
*
19410188 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGCGAAGGCTTAAGGGAC
390 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
19410253 CATTGTATGAATTTACAAGCCATCAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAA
455 CATTGTATGAATTTACAAGCCAT-AAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAA
19410318 CCCACCTACTC-CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGT-GAT----
519 CCCACCTAC-CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG-TGCGC
* * ** *
19410377 -G-C-C-CGCCCGTTCATTTCGTTGATCAGCTTCGGCATACGGAGTTCATTCCCAGTCTAAGATC
582 CGCCGCTCGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC
* *
19410438 GGACCAGACCGAGGGTTGTCACAGCAAGATTGGCAGCACAT-GAAGGGGGACCCGATCGATCCTC
647 GGACCAGACCGAGGGTTGTCGCAGCAGGATTGGCAGCACATAG-AGGGGGACCCGATCGATCCTC
* * * ** ** * *
19410502 GGCTTGTGCATCCCGCCCCTCTGGTCGACTGAGCCCCCGTACGCTCGTTTTGTGAGTTGACTTAG
711 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCGCGCGCTCGTTTCGTGGGTTGACTTAG
* * *
19410567 GCATACGGAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGA-
776 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC
*
19410631 TCGAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCA
841 T-GAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCG
*
19410679 CATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGATGGCATTGGGG
1 CATTTTTCTTCGTCGGGGCACCA---T-----CA---CCGGAGAACCTGACCGACGGCATTGGGG
** * *
19410744 TTCCGACGATCAAGGGGGTCGGGGTGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTT-GC
55 TTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGC
19410808 CCATTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC-CA-ACACCCCTTAAAGAGCATTT
120 CC-TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC-CCCCTTAAAGAGCATTT
* *
19410871 GAGATTTTACAGGTTTGCTGCCAGTAGGCATTAAAGTGTCTGAAATGGGGACACCTTTTTCAAAT
183 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* *
19410936 GGTCACACAATCTTGTACACTTCGAGTTTTTAGCT-AAATGTTTTTGTGCATGCCAACAAAAATA
248 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAAT-TTTTT-TGTATGCCAACAAAAATA
* *
19411000 AAAGGATCACGTCTACCAAGTTTGGGGCAAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAA
311 CAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAA
* *
19411065 CCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTGGCCATGAAACTTCACGCG
376 CCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
*
19411130 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATCAAAATGGCATTGGCACATAGAAATATG
441 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATGGCATTGGCACACAGAAATATG
* * * *
19411195 AAGATGTGCCTAAACCCACCTACTACCCTATCGATCCACGACTTGCGCATCCCGTTTCTCTGGGC
505 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* *
19411260 GGCGT-GAT--------GCTCGCCCGCTCATTTCGTCGATCGGCTTAGGCATACAGAGTTCATTC
570 GGCGTAG-TGCGCCGCCGCTCGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTC
* ** *
19411316 CCAGTCTAAGATCGGACCAGACCGAGGGTTGTCACAGCAACATTGGCAGCACGT-GAAGGGGGAC
634 CCAGTCTAAGATCGGACCAGACCGAGGGTTGTCGCAGCAGGATTGGCAGCACATAG-AGGGGGAC
* * * *** ** *
19411380 CCGACCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGAAACCCCGTACGCTCGTTTTG
698 CCGATCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCGCGCGCTCGTTTCG
* * *
19411445 TGAGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCAATCTAA
763 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
* * * *
19411510 GATCAGACCGGA-TCGAGGGTTGCCGGCAGCACATACTGGCCTCGAGCATGTGCTGGTGCCA
828 GATCGGACCGGACT-GAGGGTTG-CGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCG
*
19411571 CATTTTTCTTCGTCGGGGCACCATCGCCGAAGCATCGTCGGAGAACCTGACTGACGGCATTGGGG
1 CATTTTTCTTCGTCGGGGCACCAT--------CA-C--CGGAGAACCTGACCGACGGCATTGGGG
*
19411636 TTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGCC
55 TTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGC
19411701 CCTTATATTGG--------CCC-C--C-AACCTCGAGAAC-CAACACCCCCTTAAAGAGCATTTG
120 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC-ACACCCCCTTAAAGAGCATTTG
* * *
19411753 AGATTTTACAGGTTTGCTGCCAGTAGGCATTAAAGTGTCTAAAATGGGGACACCTTTTTCAAATG
184 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
*
19411818 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCT-AAATGTTTTTTTGCATGCCAACAAAAATAC
249 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAA--TTTTTTTGTATGCCAACAAAAATAC
* * *
19411882 AAGGATCATGTCTACCAAGTTTGGGGCCAACACTCCTTCCAAAAAAATTTTTAAAAATCCCGAAC
312 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAAC
* * * * *
19411947 CATAAAAAGTTTCAAATATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCAAGTGA
377 CGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* ** * *
19412012 AGGCTTAAGGGACCATTGTATGAATTTACAACCCATAAAATTGGCATTGGCATGCACAAATCTGA
442 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA-TGGCATTGGCACACAGAAATATGA
*
19412077 AGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
506 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * *
19412142 GCGTAGTGCCCGACCGCCCGTCCGTCCGCCCGCTCATTTCGTCGGTTGGCTTGGGCATACGAAGT
571 GCGTAGTG--CG-CCG-CCG--C-T-CGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGT
* * * * * *
19412207 TCATTCCCAGGCTAGGATCGGACCAGATCGAGGGTTGTGGTAGCAGGATTGGCAGCACACAGAGG
628 TCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTCGCAGCAGGATTGGCAGCACATAGAGG
* * * *
19412272 GGGACCTGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCACGCGCTCG
693 GGGACCCGATCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCGCGCGCTCG
* * *
19412337 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGATTTCATTCCTAA
758 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
* * * *
19412402 TCTAAGATCGGACTGGACTGAGGGTTGCGGCAGCACATGCTGGGCTTGGGCATATGCTGGTGCCG
823 TCTAAGATCGGACCGGACTGAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCG
* * * * * *
19412467 TATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACTGGCGGCATTAGGGTTTCGGCGATC
1 CATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
* * *
19412532 GAGGGGGCCGGGGGGGTGTGCGAACATGATGTGCGATGAGTGCTGGTACTTGGCCCTTATATTGG
66 GGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
* * *
19412597 CCCCCTATCCCTCATCAAACCTCAAGAACTCACACCTCCTT-AAGAGCATTTGAGATTTTATAGG
131 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* * *
19412661 TTTGCTGCTAGTAGCCATTAAAGTATCTGAAATGGGGACACTTTTTTCAAATGGTCGCAAAATCT
196 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * **
19412726 TGTACACTACGAGTTTTTAGCTGAAATTTTTTTGTATGCCTACAAAAATACAAGGATCACGTCCC
261 TGTACACTTCGAGTTTTTAGCTGAAATTTTTTTGTATGCCAACAAAAATACAAGGATCACGTCTA
* * * *
19412791 CCAAGTTTGGGGCCAAAACACCTGCGAAAAAAATTTAAAAAAATCCCGAACCGTAAAAAGTTTCA
326 CCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA
* *
19412856 AAAATCGTTAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
391 AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* * *
19412921 ATTGTATGACTTTACCAGCCATAACAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAAC
456 ATTGTATGAATTTACAAGCCATAA-AATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAAC
* * **
19412986 CCACCTACCACCCTATCGCTCCACGGCTTGTGCATCCCGTCTCTCTATCCGGCGTAGTGC-CCG-
520 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGC
* * * * *
19413049 C-C-CGCCCGCTCATTTCATCGGTTGGCTTAGGCATACGGTGTTTATTCCCAGTCTAAGATCTGA
585 CGCTCGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* ** * * * **
19413112 CCAGACCGAGGGTTG-CGGTAATAGGATCGACAGCACGTAGAGGGGGACCCGGCCGATCCTCGGC
650 CCAGACCGAGGGTTGTC-GCAGCAGGATTGGCAGCACATAGAGGGGGACCCGATCGATCCTCGGC
* * * ** * * *
19413176 ATACACATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTAGGTTGACATAGGCA
714 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCGCGCGCTCGTTTCGTGGGTTGACTTAGGCA
* * * * *
19413241 TACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTCAGTCTAAGATTGGACCAGACCGA
779 TACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGA
* *
19413306 GGGTTACGGCAGCACATGCTGGGCTCGAGCAAGTGCTGGTGCCG
844 GGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCG
* *
19413350 CATTTTTCTTTG-CTGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGATGGCATTGGG
1 CATTTTTCTTCGTC-GGGG---CA----C----CATCACCGGAGAACCTGACCGACGGCATTGGG
*
19413414 GTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGC
54 GTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
* *
19413478 CCCTTATATTGGTCCCCTATCCCTCATCAAACCTCGAGAACTCATACCCCCTTAAAGAGCATTTG
119 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* *
19413543 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTATTTCAAATG
184 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
19413608 GTCACAAAATCTTGTACACTTCGAGTTTTCAGCTG-AATTTTTTTGTGCACGCCACCAAAAATAC
249 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTTGT--ATGCCAACAAAAATAC
* * * *
19413672 AAGGATCACGTCTACTAAGTTTTGGGTCAAAACACCTT---AAAAAA---T------T-------
312 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAAC
*
19413718 -GT-----G----AAAAAT-A-G-AAAAT-------GAGTCGTCTTGCCATAAAACTTCACGTGA
377 CGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* *
19413763 AGGCTTAAGGGACCATTGTATGAGTTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGA
442 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATGGCATTGGCACACAGAAATATGA
* * *
19413828 AGATGTGCCTAAACCCACCTACCACCCAATCGATCCACGGCTTGCGCTTCCTGTCTCTCTGGCCG
506 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * * *
19413893 GTGTAGT--G-C-CCGC-CGACCGCTCGTTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCC
571 GCGTAGTGCGCCGCCGCTCGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCC
* * * *** *
19413953 AGTGTAAGATTGGACC-GAACCGAGGGTTG-CAGCAGCAGCATCAACAGCACGTAGAGGGGGACC
636 AGTCTAAGATCGGACCAG-ACCGAGGGTTGTC-GCAGCAGGATTGGCAGCACATAGAGGGGGACC
* * * * * *
19414016 CGATCGATCCCCGGCTTACGCATCCCACCCCTCTGGTCGGCTAAGTGCCCGCACGCTCGTTTCGT
699 CGATCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCGCGCGCTCGTTTCGT
* * * *
19414081 TGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAACCATACTGAGTTCATTCCCAGTCTAAG
764 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG
** * * * * *
19414146 ATCGGATTGAACCGAGGGTTACGGCAGCAGATGTTGGGCTCTG-GCATGTGCTGGTGCCAG
829 ATCGGACCGGACTGAGGGTTGCGGCAGCACATGCTGGGCTC-GAGCATGTGCTGGTGCC-G
* * ** * ** *
19414206 -ATTTTTATTCGTTGGGGCACCATCGTCGGAGAACATGACC-AGCGATATTGGGGTT-TGAGCGA
1 CATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACCGA-CGGCATTGGGGTTCCGA-CGA
*
19414268 TCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGCGTGCTGGTACTTGGCCCTTATATT
64 TCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
*
19414332 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAGAGAGCATTTGAGATTTTACA
129 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
* *
19414397 GGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTTTTC-AATGGTCACAACAT
194 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
**
19414461 CTTGTACACTTC-ACACTTTTAGCTG-AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
259 CTTGTACACTTCGA-GTTTTTAGCTGAAATTTTTTTGT--ATGCCAACAAAAATACAAGGATCAC
* *
19414524 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAA-CCCAAACCGCAAAAAG
321 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAG
* * * *
19414588 TTTCAAAAATCATGAAAAATCGAAAACGAGTCGTCTTGCCATCAAACTTCATGTAAAGGCTTAAG
386 TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
19414653 GGACCATTGTATGAATTTACAAGCCATTAAAATGGCATTGGCACACAGAAATATGAAGATGTGCC
451 GGACCATTGTATGAATTTACAAGCCA-TAAAATGGCATTGGCACACAGAAATATGAAGATGTGCC
19414718 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
515 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
19414756 CCGCCTTGCG
Statistics
Matches: 3612, Mismatches: 335, Indels: 259
0.86 0.08 0.06
Matches are distributed among these distances:
842 1 0.00
843 97 0.03
844 201 0.06
846 6 0.00
848 1 0.00
849 1 0.00
852 2 0.00
854 3 0.00
855 269 0.07
856 154 0.04
857 2 0.00
862 1 0.00
863 5 0.00
866 6 0.00
867 1 0.00
870 1 0.00
871 6 0.00
872 1 0.00
873 1 0.00
874 5 0.00
875 2 0.00
880 37 0.01
881 509 0.14
882 10 0.00
883 274 0.08
884 3 0.00
885 95 0.03
886 3 0.00
887 1 0.00
888 3 0.00
889 2 0.00
890 8 0.00
891 725 0.20
892 201 0.06
893 108 0.03
894 150 0.04
895 307 0.08
896 161 0.04
897 246 0.07
898 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (887 bp):
CATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
GGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
TGTACACTTCGAGTTTTTAGCTGAAATTTTTTTGTATGCCAACAAAAATACAAGGATCACGTCTA
CCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA
AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
ATTGTATGAATTTACAAGCCATAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACC
CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGCC
GCTCGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
CAGACCGAGGGTTGTCGCAGCAGGATTGGCAGCACATAGAGGGGGACCCGATCGATCCTCGGCTT
GCGCATCCCGCCCCTCTGGCCGGCTGAGTGCCCGCGCGCTCGTTTCGTGGGTTGACTTAGGCATA
CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGG
GTTGCGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCG
Found at i:19413274 original size:26 final size:26
Alignment explanation
Indices: 19413238--19413290 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19413228 GTTGACATAG
19413238 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
19413264 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19413290 G
1 G
19413291 ATTGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19415491 original size:765 final size:766
Alignment explanation
Indices: 19414005--19415520 Score: 2167
Period size: 765 Copynumber: 2.0 Consensus size: 766
19413995 AACAGCACGT
* * *
19414005 AGAGGGGGACCCGATCGATCCCCGGCTTACGCATCCCACCCCTCTGGTCGGCTAAGTGCCCGCAC
1 AGAGGGGGACCCGACCGATCCCCGACTTACGCATCCCACCCCTCTGGTCGGCTAAGCGCCCGCAC
* * *
19414070 GCTCGTTTCGTTGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAACCATACTGAGTTCATT
66 GCTCATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAACCAAACTGAGTTCATT
** * * * * *
19414135 CCCAGTCTAAGATCGGATTGAACCGAGGGTTACGGCAGCAGATGTTGGGCTCTGGCATGTGCTGG
131 CCCAGTCTAAGATCAAACTGAACCGAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGG
*** * * * *
19414200 TGCCAGATTTTTATTCGTTGGGGCACCATCGTCGGAGAACATGACCAGCGATATTGGGGTTTGAG
196 TGCCAGATTTTTATTCACCGGGGCACCATCGACGCAGAACATGACCAGCGATATTGAGGTTCGAG
** *
19414265 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGCGTGCTGGTACTTGGCCCTTATA
261 CGATCGGGGGGGCCAAGGGGTGTGCGCACATGATGTGCGATGCGTGCTGGAACTTGGCCCTTATA
*
19414330 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAGAGAGCATTTGAGATTTTA
326 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * *
19414395 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTTTTCAATGGTCACAACA
391 CAGGTTTACTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTTTTAAATGGTCACAAAA
* *
19414460 TCTTGTACACTTCACACTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACG
456 TCTTGTACACTTCACACTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACG
19414525 TCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAACCCAAACCGCAAAAAGTT
521 TCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAACCCAAACCGCAAAAAGTT
* * *
19414590 TCAAAAATCATGAAAAATCGAAAACGAGTCGTCTTGCCATCAAACTTCATGTAAAGGCTTAAGGG
586 TCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATCAAACTTCACGTAAAGGCTTAAGAG
* *
19414655 ACCATTGTATGAATTTACAAGCCATTAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTA
651 ACCATTCTATGAATTTACAAGCCATGAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTA
*
19414720 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCCCGCCTTGCGCCCAC
716 AACCCACCTACCACCCTATCGATCCACGACTTGCGCCCGCCTTGCGCCCAC
** * * * *
19414771 AGAGGGGGACCCGACCGATCCCCGACTTGGGCATCCCGCCTCTCTGGTCGGCTGAGCGCCCGTAC
1 AGAGGGGGACCCGACCGATCCCCGACTTACGCATCCCACCCCTCTGGTCGGCTAAGCGCCCGCAC
* * *
19414836 GCTCATTTTGTGGGTTGACTTAGGCATAC-AGAGTTCATTCCCAGTCTGAGCAAAC-GAAGTTCA
66 GCTCATTTCGTGGGTTGACTTAGGCATACGA-AGTTCATTCCCAGTCTAACCAAACTG-AGTTCA
* * *
19414899 TTCCCAGTC-AAGATCAAACTGGACCGAGGGTTGCGACAGTACATGCTGGGCTCGGGCATGTGCT
129 TTCCCAGTCTAAGATCAAACTGAACCGAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCT
* * * *
19414963 GGTGTC-GCATTTTTCTTCACCGGGGCACCATC-ACAGCAGAACCTGACC-GACGGTATTGAGGT
194 GGTGCCAG-ATTTTTATTCACCGGGGCACCATCGAC-GCAGAACATGACCAG-CGATATTGAGGT
* * * *
19415025 TCCG-GCGATC-GGGGGGCCAAGGGGTGTGTGCACATGATGTTCGATGGGT-ATCGGAACTTGGC
256 T-CGAGCGATCGGGGGGGCCAAGGGGTGTGCGCACATGATGTGCGATGCGTGCT-GGAACTTGGC
* *
19415087 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCGCACCCCCTTAAAGAGCTTTTGA
319 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
*
19415152 GATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTGAAATGG
384 GATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTTTT-AAATGG
** *
19415217 TCACAAAATCATT-TACACTTCGA-GTTTTTAGCTTAA-TTTTTTATGCATGCCAAAAAAAATAC
448 TCACAAAATC-TTGTACACTTC-ACACTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATAC
* * * * ** *
19415279 GAGGATCACGTCTACCAAGTTTGGGGCCAAAGCTCCTTCCGAAAGAATTTTAAAAAATGTCGAAC
511 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAA-CCCAAAC
* ** * * *
19415344 CGTAAAAAGTTTTGAAAATCATGGAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
575 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATCAAACTTCACGTAA
19415409 AGGCTTAAGAGACCATTCTATGAATTTACAAGCCATGAAAATGGCATTGGCACATC-GAAATATG
640 AGGCTTAAGAGACCATTCTATGAATTTACAAGCCATGAAAATGGCATTGGCACA-CAGAAATATG
19415473 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGC
704 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGC
19415521 ATCCCGTCTC
Statistics
Matches: 664, Mismatches: 74, Indels: 25
0.87 0.10 0.03
Matches are distributed among these distances:
763 1 0.00
764 241 0.36
765 299 0.45
766 123 0.19
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.25
Consensus pattern (766 bp):
AGAGGGGGACCCGACCGATCCCCGACTTACGCATCCCACCCCTCTGGTCGGCTAAGCGCCCGCAC
GCTCATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAACCAAACTGAGTTCATT
CCCAGTCTAAGATCAAACTGAACCGAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGG
TGCCAGATTTTTATTCACCGGGGCACCATCGACGCAGAACATGACCAGCGATATTGAGGTTCGAG
CGATCGGGGGGGCCAAGGGGTGTGCGCACATGATGTGCGATGCGTGCTGGAACTTGGCCCTTATA
TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
CAGGTTTACTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTTTTAAATGGTCACAAAA
TCTTGTACACTTCACACTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACG
TCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAACCCAAACCGCAAAAAGTT
TCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATCAAACTTCACGTAAAGGCTTAAGAG
ACCATTCTATGAATTTACAAGCCATGAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTA
AACCCACCTACCACCCTATCGATCCACGACTTGCGCCCGCCTTGCGCCCAC
Found at i:19416596 original size:896 final size:894
Alignment explanation
Indices: 19414770--19418317 Score: 4536
Period size: 896 Copynumber: 4.0 Consensus size: 894
19414760 CTTGCGCCCA
* * * * *
19414770 CAGAGGGGGACCCGACCGATCCCCGACTTGGGCATCCCGCCTCTCTGGTCGGCTGAGCGCCCGTA
1 CAGAAGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTA
* * *
19414835 CGCTCATTTTGTGGGTTGACTTAGGCATAC-AGAGTTCATTCCCAGTCTGAGCAAACGAAGTTCA
66 CGCTCATTTCGTGGGTTGACTTAGGCATACGAGAGTTCATTCCCAGTCTAAGC-AACGGAGTTCA
* ** ** *
19414899 TTCCCAGTCAAGATCAAACTGGACCGAGGGTTGCGACAGTACATGCTGGGCTCGGGCATGTGCTG
130 TTCCCAATCAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTG
* * * *
19414964 GTGTCGCATTTTTCTTCACCGGGGCACCAT---C--A-CA--GC--AGAACCTGACCGACGGTAT
195 GTGCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGCGGAGAACCTGATCGACGGCAT
* * * * * *
19415019 TGAGGTTCCGGCGATCGGGGGGCCAAGGGGTGTGTGCACATGATGTTCGATGGGT-ATCGGAACT
260 TGGGGTTCCGGCGATCGGGGGGCCGAGGGGTGTGCGCACATGATGTGCGATGGGTGCT-GGTACT
* *
19415083 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCGCACCCCCTTAAAGAGCTT
324 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
* * *
19415148 TTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTGAA
389 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAA
*
19415213 ATGGTCACAAAATCATT-TACACTTCGAGTTTTTAGCTTAA-TTTTTTATGCATGCCAAAAAAAA
454 ATGGTCACAAAATC-TTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGCC-AAAAAAA
* * * * **
19415276 TACGAGGATCACGTCTACCAAGTTTGGGGCCAAAGCTCCTTCCGAAAGAATTTTAAAAAATGTCG
517 TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTCCGAAAAAATTTTAAAAAATCCCG
** * * *
19415341 AACCGTAAAAAGTTTTGAAAATCATGGAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
582 AACCGTAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGAGTCATCTTGCCATGAAACTTCACG
* ** *
19415406 TGAAGGCTT-AAGAGACCATTCTATGAATTTACAAGCCATGAAAATGGCATTGGCACATCGAAAT
647 TGAAGGCTTAAAG-GACCATTGTATGAATTTACAAGCCAT-AAAATATCATTGGCACATAGAAAT
*
19415470 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTG
710 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* * * * * *
19415535 GTCGACGTAGTGCTCGCCCGCCTGCTCGCTCGTTTCATCAGTTGGCTTAGGCATACGAAGTTCAT
775 GCCGACGTAGTGCTCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA-
* * * * * ** * * * * *
19415600 TTCC-ATTTTAAGATCAGTCTGGACTGAGGGTTACGGCAACAGGATGGGCAGCACA
839 TTCCTAGTCTAAGATCGGACCGGACCAAGGGTTGCGGTAGCAGGATCGGCAGCACG
* * * * * *
19415655 CAGAGGGGGACCCGATCGATCCCCGGCTTGCACTTCCCG-CCCTCTGGCCGGCTGAGCGCCCATG
1 CAGAAGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTA
* * *
19415719 CGTTCGTTTCATGGGTTGACTTAGGCATACGA-AGTTCATTCCCAGTCTAAGCAACGGAGTTCAT
66 CGCTCATTTCGTGGGTTGACTTAGGCATACGAGAGTTCATTCCCAGTCTAAGCAACGGAGTTCAT
* * * ** *
19415783 TCCCAATCTAAGATCGGACCAAACCGAGGGTTACGGCAGCACATATTAGGCTCGGGCATGTGCTG
131 TCCCAATC-AAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTG
* * *
19415848 GTGACGCATTTTTCTTCGCCGGGGCACCATCATCGGAGCATCGTCGGAGAACATGATCGACGGCA
195 GTGCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCG-CGGAGAACCTGATCGACGGCA
* * * * *
19415913 TTCGGGTTCCGGCGATCAGGGGGGCCGGGGGGTGTGCGCACACGATGTGCAACGGGTGCTGGTAC
259 TTGGGGTTCCGGCGATC-GGGGGGCCGAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC
* *
19415978 TTGGCCCTTATATTGGCCCCCTATCCCTCAACAAACCTCAAGAACTCACACCCCCTTAAAGAGCA
323 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
19416043 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCA
388 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCA
*
19416108 AATGGTCACAAAATCTTGTACACTACGAGTTTTTAGCTTAATTTTTTTGTGCATGCCAAAAAAAC
453 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGCCAAAAAAA-
* *
19416173 TACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCATTTCGAAAAAATTTT-AAAAATCCCG
517 TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTCCGAAAAAATTTTAAAAAATCCCG
*
19416237 AACCGAAAAAAGTTTCAAAAAT-AGTGAAAAACAGAAAACGAGTCATCTTGCCATGAAACTTCAC
582 AACCGTAAAAAGTTTCAAAAATCA-TGAAAAACAGAAAACGAGTCATCTTGCCATGAAACTTCAC
* * *
19416301 GTGAAGGCTTAAAGGACCATTGTATGAATTTACAGGCCATAAAATATCATTGGCACGTAGGAATA
646 GTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAATATCATTGGCACATAGAAATA
* * *
19416366 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGACTCTCTGA
711 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
* *
19416431 CCGACATAGTGCTCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATGCGGAGTTCATT
776 CCGACGTAGTGCTCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * * *
19416496 CCTAGTCTAAGATTGGACCAGACCAAGGGTTGCAGTAGTAAGATTGGCAGCATG
841 CCTAGTCTAAGATCGGACCGGACCAAGGGTTGCGGTAGCAGGATCGGCAGCACG
* * * *** * * *
19416550 CAGAAGGGGACCCGACCTATCTCTGGCTTGCGCATCCCGCCCCTCTGGCATACGGAGCGCCTGCA
1 CAGAAGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTA
* *
19416615 CGTTCATTTCGTGGGTTGACTTAGGCTTACG-GAGTTCATTCCCAGTCT-----A---AG-----
66 CGCTCATTTCGTGGGTTGACTTAGGCATACGAGAGTTCATTCCCAGTCTAAGCAACGGAGTTCAT
*
19416666 -----ATC---A---GACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGG
131 TCCCAATCAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGG
* * * * * * *
19416720 TGCCGTATTTTTCTTCGTCGAGGCACCATC-CCGGAGCATCGCCGGACAACGTGA-CTGGCGGCG
196 TGCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCG-CGGAGAACCTGATC-GACGGCA
* * * * *
19416783 TTGGGGTTCTGGCGATCGGGGGAACCGGGGGGGGTGTGCTCACATAATGTGCGATGGGTGCTGGT
259 TTGGGGTTCCGGCGATCGGGGG-GCC--GAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
19416848 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
321 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
*
19416913 CATGTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAAGTGTTTGAAATGGGGACACTTTTT
386 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT-AAAGTGTTTGAAATGGGGACACTTTTT
* *
19416978 TCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAA
450 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGCCAAAAA
* * *
19417042 AATACAAGGATCACGTCTACCAAGATTGGGGCCAAAACTCATTTCAAAAAAATTTTAAAAAATCC
515 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTCCGAAAAAATTTTAAAAAATCC
* * *
19417107 CGAACCG-AAAAGGTTTCAAAAATCGTGAAAAACAGAAAACGACTCATCTTGCCATGAAACTTCA
580 CGAACCGTAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGAGTCATCTTGCCATGAAACTTCA
* *
19417171 CATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAATATCATTGGCACATAGAAAT
645 CGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAATATCATTGGCACATAGAAAT
* *
19417236 ATGAAGAGGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTG
710 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* * * * *
19417301 GTCGACGTAGTGCCTGCCCGCCCGCCCGCCCGTTCGTTTCGTGGGTTGTCTGAGGCATACGGAGT
775 GCCGACGTAGTG-CT---CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* * * *
19417366 TCTTTCCTAGTCTAAGATCGGATCGGACCAAGGGTTGCGGTGGCAGGATCAGCAGCACG
836 TCATTCCTAGTCTAAGATCGGACCGGACCAAGGGTTGCGGTAGCAGGATCGGCAGCACG
* * * * * * * * *
19417425 TAGAAGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCACCCTTCTGGCTGGCAGAGTGCCCGCA
1 CAGAAGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTA
* * *
19417490 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGCATACGGAGTTCATTCCCAGTTTAAGCATAT
66 CGCTCATTTCGTGGGTTGACTTAGGCATAC---G---A--GAGTTCATTCCCAGTCTAAGCA-AC
* **
19417555 GGCGTTCATTCCCAATCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGG
122 GGAGTTCATTCCCAATC-AAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGG
* * * * * * * *
19417620 CATGTGCTGGTGCCACATTCTTCTTTGTCGGGCCACCATCGCCAGAGCATCGCAGAGAACCTGAT
186 CATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGCGGAGAACCTGAT
* * * * *
19417685 CGACGTCGTTGGGGTTCCGACAATCGGGGGGGCCGAAGGGGTGTGCTCACATGATGTGCGATGGG
251 CGACGGCATTGGGGTTCCGGCGATC-GGGGGGCCG-AGGGGTGTGCGCACATGATGTGCGATGGG
*
19417750 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCGCGAGAACTCACACCCCCT
314 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* * *
19417815 TAAAGAGCATTTGAGATTTTACCGGTTCGCTGCCAGTAGCCATTAAAGGGTTTGAAATGGGGACA
379 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACA
* *
19417880 CTTTTTTCAAAAGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATAC
444 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGC
* * * *
19417945 CAACAAAAATACAAGGATCATGTCTACCAAGTTTTGGGCCAAAACTCCTTCCGAAAAAAATTTAA
509 CAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTCCGAAAAAATTTTAA
** * * *
19418010 AAAATGTCG-AGCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
573 AAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGAGTCATCTTGCCATGA
*
19418074 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA-ATGGCATTGGCA
638 AACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAATAT--CATTGGCA
*
19418138 CATAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
701 CATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
* * *
19418203 GTCTCTCTGGCCGATGTAGTGCCCGCCC-CTCCGCCCGCTCGTTTCGTCGGCTGGCTTAGGCATA
766 GTCTCTCTGGCCGACGTAGTGCTCGCCCGC-CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
* * * *
19418267 TGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
830 CGGAGTTCATTCCTAGTCTAAGATCGGACCGGACCAAGGGTTGCGGTAGCA
19418318 CATGCTGGCC
Statistics
Matches: 2315, Mismatches: 269, Indels: 136
0.85 0.10 0.05
Matches are distributed among these distances:
869 6 0.00
870 42 0.02
871 303 0.13
872 154 0.07
873 84 0.04
874 1 0.00
875 168 0.07
878 4 0.00
883 18 0.01
884 155 0.07
885 35 0.02
887 1 0.00
888 2 0.00
889 1 0.00
890 3 0.00
891 1 0.00
892 1 0.00
893 2 0.00
894 4 0.00
895 234 0.10
896 362 0.16
897 66 0.03
903 3 0.00
906 1 0.00
907 79 0.03
908 83 0.04
909 138 0.06
910 259 0.11
911 105 0.05
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (894 bp):
CAGAAGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTA
CGCTCATTTCGTGGGTTGACTTAGGCATACGAGAGTTCATTCCCAGTCTAAGCAACGGAGTTCAT
TCCCAATCAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGG
TGCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGCGGAGAACCTGATCGACGGCATT
GGGGTTCCGGCGATCGGGGGGCCGAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAAT
GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGCCAAAAAAATACA
AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTCCGAAAAAATTTTAAAAAATCCCGAACC
GTAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAA
GGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAATATCATTGGCACATAGAAATATGAAG
ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGAC
GTAGTGCTCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAG
TCTAAGATCGGACCGGACCAAGGGTTGCGGTAGCAGGATCGGCAGCACG
Found at i:19417575 original size:26 final size:26
Alignment explanation
Indices: 19417522--19417575 Score: 72
Period size: 26 Copynumber: 2.1 Consensus size: 26
19417512 AGGCATACGG
* *
19417522 AGCATACGGAGTTCATTCCCAGTTTA
1 AGCATACGGAGTTCATTCCCAATCTA
* *
19417548 AGCATATGGCGTTCATTCCCAATCTA
1 AGCATACGGAGTTCATTCCCAATCTA
19417574 AG
1 AG
19417576 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 4, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.24, G:0.19, T:0.30
Consensus pattern (26 bp):
AGCATACGGAGTTCATTCCCAATCTA
Found at i:19417986 original size:910 final size:906
Alignment explanation
Indices: 19416648--19418312 Score: 2592
Period size: 910 Copynumber: 1.8 Consensus size: 906
19416638 GGCTTACGGA
* *
19416648 GTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
1 GTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
** * * * * *
19416713 GTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCCCGGAGCATCGCCGGACAACGTGACTGG
66 GTGCTGGTGCCACATTCTTCTTCGTCGAGGCACCATCCCAGAGCATCGCCAGACAACCTGACTGA
* * * **
19416778 CGGCGTTGGGGTTCTGGCGATCGGGGGAACCGGGGGGGGTGTGCTCACATAATGTGCGATGGGTG
131 CGGCGTTGGGGTTCCGACAATCGGGGGAACCGGAAGGGGTGTGCTCACATAATGTGCGATGGGTG
*
19416843 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
196 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCGCGAGAACTCACACCCCCTTA
* *
19416908 AAGAGCATGTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAAGTGTTTGAAATGGGGACAC
261 AAGAGCATGTGAGATTTTACAGGTTCGCTGCCAGTAGCCATTAAAAGGGTTTGAAATGGGGACAC
* *
19416973 TTTTTTCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
326 TTTTTTCAAAAGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATACC
*
19417038 AAAAAATACAAGGATCACGTCTACCAAGATTGGGGCCAAAACTCATTTC-AAAAAAATTTTAAAA
391 AAAAAATACAAGGATCACGTCTACCAAGATTGGGGCCAAAACTCATTCCGAAAAAAA-TTTAAAA
* *
19417102 AATCCCGAACCG-AAAAGGTTTCAAAAATCGTGAAAAACAGAAAACGACTCATCTTGCCATGAAA
455 AATCCCG-ACCGTAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGACTCATCTTGCCATGAAA
19417166 CTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAATAT-CATTGGCACAT
519 CTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA-ATGCATTGGCACAT
*
19417230 AGAAATATGAAGAGGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
583 AGAAATATAAAGAGGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * * * * *
19417295 TCTTTGGTCGACGTAGTGCCTGCCCGCCCGC-CCGCCCGTTCGTTTCGTGGGTTGTCTGAGGCAT
648 TCTCTGGCCGACGTA--G--TGCCCGCCC-CTCCGCCCGCTCGTTTCGTCGGCTGGCTGAGGCAT
* * *
19417359 ACGGAGTTCTTTCCTAGTCTAAGATCGGATCGGACCAAGGGTTGCGGTGGCAGGATCAGCAGCAC
708 ACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGGTGGCAGGATCAGCAGCAC
19417424 GTAGAAGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCACCCTTCTGGCTGGCAGAGTGCCCGC
773 GTAGAAGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCACCCTTCTGGCTGGCAGAGTGCCCGC
19417489 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGCATACGGAGTTCATTCCCAGTTTAAGCATA
838 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGCATACGGAGTTCATTCCCAGTTTAAGCATA
19417554 TGGC
903 TGGC
* **
19417558 GTTCATTCCCAATCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCAT
1 GTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* *
19417623 GTGCTGGTGCCACATTCTTCTTTGTCG-GGCCACCATCGCCAGAGCATCG-CAGAGAACCTGA-T
66 GTGCTGGTGCCACATTCTTCTTCGTCGAGG-CACCATC-CCAGAGCATCGCCAGACAACCTGACT
* ** *
19417685 CGACGTCGTTGGGGTTCCGACAATCGGGGGGGCC-GAAGGGGTGTGCTCACATGATGTGCGATGG
129 -GACGGCGTTGGGGTTCCGACAATCGGGGGAACCGGAAGGGGTGTGCTCACATAATGTGCGATGG
19417749 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCGCGAGAACTCACACCCCC
193 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCGCGAGAACTCACACCCCC
* *
19417814 TTAAAGAGCATTTGAGATTTTACCGGTTCGCTGCCAGTAGCCATT-AAAGGGTTTGAAATGGGGA
258 TTAAAGAGCATGTGAGATTTTACAGGTTCGCTGCCAGTAGCCATTAAAAGGGTTTGAAATGGGGA
* *
19417878 CACTTTTTTCAAAAGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCAT
323 CACTTTTTTCAAAAGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAT
* * * *
19417943 ACCAACAAAAATACAAGGATCATGTCTACCAAGTTTTGGGCCAAAACTCCTTCCGAAAAAAATTT
388 ACC-A-AAAAATACAAGGATCACGTCTACCAAGATTGGGGCCAAAACTCATTCCGAAAAAAATTT
** * * * *
19418008 AAAAAATGTCGAGCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
451 AAAAAATCCCGACCGTAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGACTCATCTTGCCATG
*
19418073 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
516 AAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT-GCATTGGCA
*
19418138 CATAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
580 CATAGAAATATAAAGAGGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
* * *
19418203 GTCTCTCTGGCCGATGTAGTGCCCGCCCCTCCGCCCGCTCGTTTCGTCGGCTGGCTTAGGCATAT
645 GTCTCTCTGGCCGACGTAGTGCCCGCCCCTCCGCCCGCTCGTTTCGTCGGCTGGCTGAGGCATAC
*
19418268 GGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
710 GGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGG
19418313 CAGCACATGC
Statistics
Matches: 684, Mismatches: 61, Indels: 23
0.89 0.08 0.03
Matches are distributed among these distances:
906 1 0.00
907 79 0.12
908 82 0.12
909 143 0.21
910 276 0.40
911 103 0.15
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (906 bp):
GTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
GTGCTGGTGCCACATTCTTCTTCGTCGAGGCACCATCCCAGAGCATCGCCAGACAACCTGACTGA
CGGCGTTGGGGTTCCGACAATCGGGGGAACCGGAAGGGGTGTGCTCACATAATGTGCGATGGGTG
CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCGCGAGAACTCACACCCCCTTA
AAGAGCATGTGAGATTTTACAGGTTCGCTGCCAGTAGCCATTAAAAGGGTTTGAAATGGGGACAC
TTTTTTCAAAAGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATACC
AAAAAATACAAGGATCACGTCTACCAAGATTGGGGCCAAAACTCATTCCGAAAAAAATTTAAAAA
ATCCCGACCGTAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGACTCATCTTGCCATGAAACT
TCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGCATTGGCACATAGA
AATATAAAGAGGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
CTGGCCGACGTAGTGCCCGCCCCTCCGCCCGCTCGTTTCGTCGGCTGGCTGAGGCATACGGAGTT
CATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGGTGGCAGGATCAGCAGCACGTAGAAGG
GGACCCGGCCGATCCCCAGCTTGCGCATCCCACCCTTCTGGCTGGCAGAGTGCCCGCACGCTCGT
TTCGTGGGTTGACTTAGGCATACGGAGCATACGGAGTTCATTCCCAGTTTAAGCATATGGC
Found at i:19418914 original size:713 final size:717
Alignment explanation
Indices: 19417549--19419034 Score: 2225
Period size: 713 Copynumber: 2.1 Consensus size: 717
19417539 CCCAGTTTAA
* * * * *
19417549 GCATATGGCGTTCATTCCCAATCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACATGCTGGG
1 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGC
* * * * *
19417614 CTCGGGCATGTGCTGGTGCCACATTCTTCTTTGTCGGGCCACCATCGCCAGAGCATCGCAGAGAA
66 CTCCGACATGTACTGGTGCCACATTCTTCTTCGTCGGGCCACCATCGCCAGAGCATCCCAGAGAA
* * * *
19417679 CCTGATCGACGTCGTTGGGGTTCCGACAATCGGGGGGGCCGAAGGGGTGTGCTCACATGATGTGC
131 CCTGACCGACGGCATTGGGGTTCCGACAATCGGGGGGGCCGAAGGGGTGTGCGCACATGATGTGC
* *
19417744 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCGCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCGCAAGAACTCACA
** * * * * *
19417809 CCCCCTTAAAGAGCATTTGAGATTTTACCGGTTCGCTGCCAGTAGCCATTAAAGGGTTTGAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAAGTTCACTACCAATAGCCATTAAAAGGTCTGAAATG
* * *
19417874 GGGACACTTTTTTCAAAAGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGT
326 CGGACACTTTTTTCAAAAGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
19417939 GCATACCAACAAAAATACAAGGATCATGTCTACCAAGTTTTGGGCCAAAACTCCTTCCGAAAAAA
391 GCATACCAACAAAAATACAAGGATCACGTCTACCAAGTTTTGGGCCAAAACTCCTTCCGAAAAAA
* * *
19418004 ATTTAAAAAATGTCGAGCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
456 ATTTAAAAAATGTCGACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCATGC
19418069 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
521 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * *
19418134 GGCACATAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
586 GGCACACAGAAATATAAACATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCA
* ** * * *
19418199 TCCCGTCTCTCTGGCCGATGTAGTGCCC-GCC-CCT-CC-GCCCGCTCGTTTCGTCGGCTGGCTT
651 TCCCGTCTCTCTAGCCGACATAGTGCCCACCCGCCTGCCTGCCCGCTCGTTTCATCGGCTCGCTT
19418260 AG
716 AG
19418262 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGC
1 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGC
* * * * * * *
19418327 CTCCGACATGTACTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCTCCTGAGA
66 CTCCGACATGTACTGGTGCCACATTCTTCTTCGTCGGGCCACCATCGCCAGAGCATC-CCAGAGA
* * * * * **
19418392 ACCTGACCGGCGGCATTGGGGTTCTGGCGAT-TGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
130 ACCTGACCGACGGCATTGGGGTTCCGACAATCGGGGGGGCCGAAGGGGTGTGCGCACATGATGTG
*
19418456 CGATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCGCAAGAACTCAC
* *
19418521 ACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTACTACCAATAGCCATTAAAATGTCTGAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTCACTACCAATAGCCATTAAAAGGTCTGAAAT
*
19418586 GCGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTC-AGTTTTTAGCTGAATTTTTTTG
325 GCGGACACTTTTTTCAAAAGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
19418650 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG-TTTGGAGCCAAAACTCCTTCTGAAAA
390 TGCATACCAACAAAAATACAAGGATCACGTCTACCAAGTTTTGG-GCCAAAACTCCTTCCGAAAA
* * *
19418714 AATTTTAAAAAAT-TCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATAAGTCGTC
454 AAATTTAAAAAATGTC-G-ACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTC
*
19418778 ATGCCATTAAACTTCACGTG-AGTGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
517 ATGCCATGAAACTTCACGTGAAG-GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
*
19418842 GCATTGGCACACAGAAATATGAACATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTT
581 GCATTGGCACACAGAAATATAAACATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTT
* *
19418907 GCGCATCCCGTCTCTCTAGCCGACATAGTGCCCACCCGCCTGCCTGCCTGCTCGTTTCATCGGTT
646 GCGCATCCCGTCTCTCTAGCCGACATAGTGCCCACCCGCCTGCCTGCCCGCTCGTTTCATCGGCT
19418972 CGCTTAG
711 CGCTTAG
* * ** *
19418979 GCATACGGAGTTCATTCCCAGTCTAAGATCGAATTGGACTGAGGGTTGCGGCAGCA
1 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
19419035 GGATCGGCAG
Statistics
Matches: 693, Mismatches: 71, Indels: 14
0.89 0.09 0.02
Matches are distributed among these distances:
711 7 0.01
712 91 0.13
713 485 0.70
714 31 0.04
715 3 0.00
716 2 0.00
717 74 0.11
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.26
Consensus pattern (717 bp):
GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGC
CTCCGACATGTACTGGTGCCACATTCTTCTTCGTCGGGCCACCATCGCCAGAGCATCCCAGAGAA
CCTGACCGACGGCATTGGGGTTCCGACAATCGGGGGGGCCGAAGGGGTGTGCGCACATGATGTGC
GATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCGCAAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAAGTTCACTACCAATAGCCATTAAAAGGTCTGAAATG
CGGACACTTTTTTCAAAAGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
GCATACCAACAAAAATACAAGGATCACGTCTACCAAGTTTTGGGCCAAAACTCCTTCCGAAAAAA
ATTTAAAAAATGTCGACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCATGC
CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCACACAGAAATATAAACATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCA
TCCCGTCTCTCTAGCCGACATAGTGCCCACCCGCCTGCCTGCCCGCTCGTTTCATCGGCTCGCTT
AG
Found at i:19420479 original size:717 final size:697
Alignment explanation
Indices: 19419106--19420605 Score: 2108
Period size: 717 Copynumber: 2.1 Consensus size: 697
19419096 GCCGGCTGAG
* * * **
19419106 CGCCCGCACGCTCGTTCCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGG
1 CGCCCGCACGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAC
* * * * * * *
19419171 TCAGACCGAGGGTTGCAGCAGCACATGTTGGGCTCGGGCATGTGCTTGTGCCACAATTTTCTTCG
66 T-GGACCGAGGGTTGCGGCAGCACATGCTGGGCTAGGGCACGTGCTGGTGCCACAATTTTCTTCA
* * *
19419236 TCGAGGCACCATAGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGTCGGGG
130 TCGAGGCACCATAGCCGGAGAACCTGACCGGCAGCATTGGGCTTCCGACGATCGGGGGGCCGGGG
* * * * * *
19419301 GGTGTGCTCACATTATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATTCCTAA
195 GGTGTACGCACATGATGTACGATGGGTGCTGGTACATGGCCCTTATATTGGACCCCTATCCCTAA
* * *
19419366 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAATAG
260 TCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATGTGAGATTTTACAGGTTTGCTGCCAATAG
*** * * *
19419431 CCATTAAAGTGTCTGAAATGTTTACACTTTTTTCAAATGGTTACAAAATCTCGTACACTTCAAGT
325 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGATCACAAAATCTCGTACACATCAAGT
* ** *
19419496 TTTTAGCTGAATTTTTTTGTGTATGCCAAAAAAAATACAACGATACGGTCTGCCAAGTTTGGGGC
390 TTTTAGCTGAATTTTTTTGTGCACACCAAAAAAAATACAACGATACGGTCTACCAAGTTTGGGGC
* *
19419561 CAAAACTCCTTCCGAAAAAATTTTAAAAAATTTTGAACCGCAAAAAGTTTAAAAAATCATGAAAA
455 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTAAAAAATCATGAAAA
* *
19419626 ATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTT
520 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
*
19419691 ACAAGCAATAAAAATGGTATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTAACAACC
585 ACAAGCAATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTAACAACC
* *
19419756 TATCGATGCACGGCTTGCGCATCCTGTCTCTCTGCCCGGCGTAGTGCCCGC
650 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGCCCGGCGTAGTG--C-C
* *
19419807 CTGCCCGCCCGCTCGTTTCGTTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG
1 C-GCCCGCACGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-G
* *
19419872 ACTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTAGGGCACGTGCTGGTGCCGCATTTTTCTTC
64 ACTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTAGGGCACGTGCTGGTGCCACAATTTTCTTC
* * *
19419937 ATC-AGGGCACCATCGTCAGAGCATCGTCGGAGAACCTGACTGGCAGCGTTGGGCTTCCGGCGAT
129 ATCGA-GGCACCA---T---AG---C--CGGAGAACCTGACCGGCAGCATTGGGCTTCCGACGAT
*
19420001 CGGGGGGGCCGGGGGGGATGTACGCACGTGATGTACGATGGGTGCTGGTACATGGCCCTTATATT
182 C-GGGGGGCC-GGGGGG-TGTACGCACATGATGTACGATGGGTGCTGGTACATGGCCCTTATATT
* * *
19420066 GGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCTCTTAAAGAGCATGTGAGATTTTACA
244 GGACCCCTATCCCTAATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATGTGAGATTTTACA
* * *
19420131 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAGACTTTTTTCAAATGATCATAAAAT
309 GGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGATCACAAAAT
* *
19420196 CTTGTACACATCGAGTTTTTAGCTGAATTTTTTTGTGCACACCAAAAAAAAATACAA-GAATCAC
374 CTCGTACACATCAAGTTTTTAGCTGAATTTTTTTGTGCACACC-AAAAAAAATACAACG-AT-AC
* * * *
19420260 -GTCTACCAAGTTTGGGGTCAAAACTCTTTCTGAAAAAATTTTAAAAAATCTCGAACCGCAGAAA
436 GGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAA
* *
19420324 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCGTGAAACTTCACGTGAAGGCTTAA
501 GTTTAAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* *
19420389 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGC
566 GGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* * *
19420454 CTAAACCCACCT-ACCACCATATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGGCGTAGT
631 CTAAACCCACCTAACAACC-TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGCCCGGCGTAGT
19420518 GCC
695 GCC
19420521 CGCCCGCACGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAA
1 CGCCCGCACGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCG-A
* *
19420586 CTGAACCGAGGGTTGTGGCA
65 CTGGACCGAGGGTTGCGGCA
19420606 ACCAGATCAA
Statistics
Matches: 706, Mismatches: 71, Indels: 32
0.87 0.09 0.04
Matches are distributed among these distances:
701 2 0.00
702 120 0.17
703 2 0.00
705 1 0.00
708 2 0.00
711 1 0.00
712 1 0.00
713 111 0.16
714 9 0.01
715 7 0.01
716 199 0.28
717 249 0.35
718 2 0.00
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.26
Consensus pattern (697 bp):
CGCCCGCACGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAC
TGGACCGAGGGTTGCGGCAGCACATGCTGGGCTAGGGCACGTGCTGGTGCCACAATTTTCTTCAT
CGAGGCACCATAGCCGGAGAACCTGACCGGCAGCATTGGGCTTCCGACGATCGGGGGGCCGGGGG
GTGTACGCACATGATGTACGATGGGTGCTGGTACATGGCCCTTATATTGGACCCCTATCCCTAAT
CAAACCTCAAGAACTCACACCCCCTTAAAGAGCATGTGAGATTTTACAGGTTTGCTGCCAATAGC
CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGATCACAAAATCTCGTACACATCAAGTT
TTTAGCTGAATTTTTTTGTGCACACCAAAAAAAATACAACGATACGGTCTACCAAGTTTGGGGCC
AAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTAAAAAATCATGAAAAA
TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
CAAGCAATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTAACAACCT
ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGCCCGGCGTAGTGCC
Found at i:19420748 original size:26 final size:26
Alignment explanation
Indices: 19420712--19420764 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19420702 GTTGACTTAG
*
19420712 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
19420738 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19420764 G
1 G
19420765 ATTGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19421662 original size:26 final size:25
Alignment explanation
Indices: 19421632--19421683 Score: 77
Period size: 25 Copynumber: 2.0 Consensus size: 25
19421622 GTTGACTTAG
19421632 GCATACAGAGTTCATTCCCAATCTAA
1 GCATA-AGAGTTCATTCCCAATCTAA
* *
19421658 GCATAGGAGTTCATTCCCAGTCTAA
1 GCATAAGAGTTCATTCCCAATCTAA
19421683 G
1 G
19421684 ATCAGATCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 19 0.79
26 5 0.21
ACGTcount: A:0.31, C:0.25, G:0.17, T:0.27
Consensus pattern (25 bp):
GCATAAGAGTTCATTCCCAATCTAA
Found at i:19423428 original size:26 final size:26
Alignment explanation
Indices: 19423392--19423441 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
19423382 GTTGACTTAG
19423392 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19423418 GCATACGGAGTTCATTCCCAGTCT
1 GCATACGGAGTTCATTCCCAGTCT
19423442 TAGATCGGAC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.24, C:0.28, G:0.20, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19424317 original size:26 final size:26
Alignment explanation
Indices: 19424281--19424333 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19424271 GTTGACTTAG
19424281 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
19424307 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19424333 G
1 G
19424334 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19425392 original size:12 final size:12
Alignment explanation
Indices: 19425375--19425407 Score: 66
Period size: 12 Copynumber: 2.8 Consensus size: 12
19425365 GTGCTGGTAC
19425375 TTGGCCCCCATA
1 TTGGCCCCCATA
19425387 TTGGCCCCCATA
1 TTGGCCCCCATA
19425399 TTGGCCCCC
1 TTGGCCCCC
19425408 TATCCCTCAT
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 21 1.00
ACGTcount: A:0.12, C:0.45, G:0.18, T:0.24
Consensus pattern (12 bp):
TTGGCCCCCATA
Found at i:19426943 original size:26 final size:26
Alignment explanation
Indices: 19426913--19426966 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
19426903 TGGGTTGACT
* *
19426913 TAGGCATACGGAGTTCATTCCCAGTC
1 TAGGCAAACAGAGTTCATTCCCAGTC
19426939 TAGGCAAACAGAGTTCATTCCCAGTC
1 TAGGCAAACAGAGTTCATTCCCAGTC
19426965 TA
1 TA
19426967 AGATCGAAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.20, T:0.26
Consensus pattern (26 bp):
TAGGCAAACAGAGTTCATTCCCAGTC
Found at i:19427860 original size:26 final size:26
Alignment explanation
Indices: 19427824--19427873 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
19427814 GACTTAGGCA
*
19427824 TATGGAGTTCATTTCCAGTCTAAGCG
1 TATGGAGTTCATTCCCAGTCTAAGCG
19427850 TATGGAGTTCATTCCCAGTCTAAG
1 TATGGAGTTCATTCCCAGTCTAAG
19427874 ATCGGACTGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.20, G:0.22, T:0.34
Consensus pattern (26 bp):
TATGGAGTTCATTCCCAGTCTAAGCG
Found at i:19429640 original size:26 final size:26
Alignment explanation
Indices: 19429604--19429654 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
19429594 GTTGACTTGC
19429604 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
19429630 GCATACGGAGTTGATTCCCAATCTA
1 GCATACGGAGTTCATTCCCAATCTA
19429655 GGATCAGATC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.25, G:0.18, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19432859 original size:897 final size:897
Alignment explanation
Indices: 19425174--19483662 Score: 21630
Period size: 892 Copynumber: 63.9 Consensus size: 897
19425164 GTTGACTTAG
* * * *
19425174 GCATACGAAGTTCATTCCCAGTCCT-AGATTGGACCAGACCGAGGGTTGCGGCAGCAGATGCTGG
1 GCATACGGAGTTCATTCCCAGT-CTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * * * * *
19425238 GCTCGGGCATGTCCTGGTGCCGCATTTTTCTTCGCCCGGGCACCA--TC---GCA-----AGAGA
65 GCTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGA
* * * * * * * *
19425293 ACTTGACCGGTGACATTGGGCTTCCGACGATCGGGGGGGCCGGGGGGGCTGTTCGCACATAACGT
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGG-TGTGCGCACATGATGT
19425358 GCGATGGGTGCTGGTACTTGGCCCCCATATTGGCCCCCATATTGGCCCCCTATCCCTCATCAAAC
192 GCGATGGGTGCTGGTACTTGG--CCC---TT-------ATATTGGCCCCCTATCCCTCATCAAAC
* * *
19425423 CTTGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTCCCAGTAGCCATTA
245 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* * * *
19425488 AAGTGTCTAAAATGGGGACACTTTTTTAAAATGGTCAAAAAATCTTGTACACTTCGAGTGTTTAG
310 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* *
19425553 CTGAATTTTTTTGTGCATGCCAACAAAACTACAAGGATAACGTCTACCAAGTTTGGGGCCAAAAC
375 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * *
19425618 TCCTTTCGAAAAAAGTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAA
440 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* * * *
19425683 AATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCACTGTTTGAATTTACAAGC
505 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
*
19425748 CATAAAAAT-GCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
570 CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * * *
19425812 TCCACGGTTTACGCATCCCGTCTCTCTAGCCGGTGTAGTGCCCGCTCGCCCACCAGCGAACTCGT
635 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCC--CG--CTCGT
* * * * ** * *
19425877 TTCTTCGATTTGCTTAGGCATACGAAGTTCATTCCCAGTCTCTGACCGAACCAGACCGAGGGTTG
696 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG
* * *
19425942 CAGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCTGGCTTGCGCATCCCGCCCC
761 CGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
* * * *
19426007 TCTGGCCTGCTGATCGCCCGCACG--C--TT-GT---TT--CAT-GG--GAC-GA---C-TT---
826 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
19426051 AG-----
891 AGTCTAA
* * * *
19426053 GCATATGGAGTTCATTCCCAGTCGAAGATTGGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19426118 CTCAGGCGTGTGCTGGTGCCGTATTTTTCTTCGCCCGGGCACCA--TC---G--TCG--GG-GAA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* * * * * * *
19426173 CTTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-CGGGGGGCTGTTCACACATAACGTGC
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGG-TGTGCGCACATGATGTGC
*
19426237 GATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
**
19426302 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTATCAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
19426367 GGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
19426432 GCATGCCAAC-AAAATACAAGGATCACGTCTA-CAAGTTT-AGGCCAAAACTCCTTCCAAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
** ** *
19426494 TTTTAAAAAATCTCGAACCAAAAAAAGTTTCAAAAATCGTCCAAAATAGAAAACGAGTCATCTTG
454 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
19426559 CCATGAAACTTCACGCGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * * *
19426624 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCATGACTTGCAC
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * * *
19426689 ATCCCATCTCTCTGGCTGACATAGTGCCAGCCCGCCTACCCGCCCGCTCGTTTCCTCGGTTGGCT
649 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG----CCCGCCCGCTCGTTTCGTCGGTTGGCT
* * * * * * * *
19426754 TAGGTATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGATCGAGGGTTGCGACAGTAAGATCA
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCG
* * * ** * *
19426819 GTAGCACGTAGAGGGGGA-CCTAGCCGATCCCTAGCTTTCGCATCCCGCCCGTCTGTG-CGGCTG
775 GCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTG-GCCGGCTG
* * * * *
19426882 AGCACCCGTATGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAG
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ** * * *
19426942 GCAAACAGAGTTCATTCCCAGTCTAAGATCGAAACAAACCAAGGGATGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * *
19427007 CTCAAGCAAGTGCTGGGGCCGTATTTTTCTTCATCGAGGCACCATCGTC-GAGCCATCG-CTGGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAG-CATCGTC-GGA
* * * * *
19427070 GAACCTAACCGACGGCATAGGGCTTCCGACGATCGGGGGGGCCGTGGGGGGTGTGCGCACATGAT
127 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--GGGGGGTGTGCGCACATGAT
*
19427135 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
190 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
19427200 CACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGTCGGTAGCCATTAAAGTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * * * *
19427265 AATGGGGACGCTTGTTTCAAATGGTCACAAAATCTTGTACA-TCTCGAGGTCTTAGCTGAATTAT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAATTTT
*
19427329 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCGAAAACTCCTTCCGA
384 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* ** *
19427394 AAAAATTTTAAAAAATC-CTGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGACTC
449 AAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
* **
19427458 GTCTCGCCATGAAACTTCACGTGAAGGCTTAAGTTACCATTGTATGAATTTACAAGCCATAAAAA
513 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* *
19427523 TGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTCACGGC
578 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
19427588 TTGTGCATCCCGTCTCTCTGGTCGGCGTAGTGGCCGCCTGCCAGCCCGTCCGCTCGTTTCGTCGG
643 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGT-G-C-CC-GCCCGCCCGCCCGCTCGTTTCGTCGG
* * *
19427653 TTGGCTTAGGCATGCGGAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGGTTGCGGCAGCA
704 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCA
* * * * * *
19427718 AGATCAGCAGCACGCAGAGGGGGACCTGATCGATCCTCGGCTTGCGCATCCTGCCCCTCTGGCCG
769 GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * *
19427783 GCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTTCCAGTCTAA
834 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
19427847 GCGTATGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19427912 CT-CGGTTATGTGCTGGTGCCGCATTTTTC-T-TC---GC-CGA----GGCACCATCGTCGGAGA
66 CTCCGG-CATGTGCTGGTGCCGTATTTTTCTTCTCGGGGCACCATCTCGG-AGCATCGTCGGAGA
* * * * * **
19427966 ACCTGGCCGGTGGCGTTAGGGTTTCGAAGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* *
19428030 GATGGGTCCTGGTACTTGGCCCTTATATTGTCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
*
19428095 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCGGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
19428160 GGGACGCTTTTTTCAAATGGTCACAAAATGTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* ** *
19428225 GCGTGCCAGA-AAAAATACAAGGATCACGTCTACCAAGTTTGAAGCCAAAATTCCTTCCGAAAAA
389 GCATGCCA-ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * *
19428289 ATTTTAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
453 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
19428354 GCCATGAAACTTCACGTGAAGGCTTAAAGGACTATTGTATGAATTTACAAGCCATAAAAATGGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
19428419 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTCACGGCTTGCG
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* *
19428484 CATCCCGTCTCTCTGGTCC-GCGTAGTGCCCGCCCGCCAGCCCGCCCGCTCGTTTCATCAGTTGG
648 CATCCCGTCTCTCTGG-CCGGCGTAGTGCCCG--C-CC-GCCCGCCCGCTCGTTTCGTCGGTTGG
* * * * *
19428548 CTTAGACATGCAGAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGGTTGCGGCAGCAGGAT
708 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * ** *
19428613 CGGCAGCACGTAGAGGTGGACCCGGTCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
773 CGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* ** * *
19428678 AGCGCCCGCATGCTCGTTTCGTGGGTTGACTTAGGCATATAGAGTTCATTTCCAGTTTAA
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19428738 GCGTATGGAGTTCATTCCCAATCTAAAATCGGATCGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19428803 CTCGGGCATGTGCTGGTGCCATATTTTTCTTCGTC-GAG-A-CA---C----CATCGCCGGAGAA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* * * * *
19428858 CCTGACCGACGGCATTGGGTTTCCAGCGATCGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCG
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * *
19428923 ATGGGTGCTGGTACTTGGCCCTTATATGGGCCCCCTATCCCTCATCAGACCTAGAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* **
19428988 CCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTATGGTGT-TGGAAATG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-GAAATG
* * *
19429052 GGGACACTCTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGTATTGTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * *
19429117 GCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGTCAAAAATCCTTCCCAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * *
19429182 TTTTAAAAAATC-CGAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCTT
454 TTTTAAAAAATCTCG-AACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
19429246 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGCCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * *
19429311 TTGGCATGCAGAGATATGAAGATGTGCCGAAACCCACCTACCACCCTATCCATCCACGGCTTGCG
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * * * **
19429376 CATCCTGTCTCTCTGGTCGACGTAGTGCCCTCCCGCCTGCCCGTCCGCTTGTTTCATTAGTTGGC
648 CATCCCGTCTCTCTGGCCGGCGTAGTG----CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGC
* ** * * *
19429441 TTAGGCATACGGAGTTCATTCCCAGTCTAACATCGGACTGGATCGAGGGTTGCAGCAGTAGGATC
709 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATC
** * * * * * * * *
19429506 GATAGCATGCAGAGGGGGACTCGACCGATCCCCGGCTTGTGCATCTCACCCCACTGGTCGGTTGA
774 GGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * ** *
19429571 GTGCTCGCACGCTCGTTTCGTAAGTTGACTT-GCGCATACGGAGTTCATTCCCAATCTAA
839 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG-GCATACGGAGTTCATTCCCAGTCTAA
* * * * * * * *
19429630 GCATACGGAGTTGATTCCCAATCTAGGATCAGATCGGACTGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19429695 CTCGGGCATGTGCTGGTGTCGTATTTTTCTTCGTCGGGGCACCATCACCAGAGCATCATCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * * * *
19429760 ACCTGACCAGCGGCATTGGGGTTCCGACGAT----TGAG--GGGGGGTGTGTGCACATGATGTGT
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * *
19429819 GATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGGGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19429884 CCCCCTTAAAGAGCATTGGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTAAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * *
19429949 GGGACACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCAAGCTTTTAGCTGAATTTTTTTAT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* **
19430014 GCATGCCAACAAAAATACAAGGATCACGTCTACCAA-TTTGGGGCCAAAAATCCTTCTAAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
** * *
19430078 TTTTAAAAAATC-CGAAACCGTAAAAAGTTTTGAAAATTGTGAAAAACAGAAAACGAGTCGTCTT
454 TTTTAAAAAATCTCG-AACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
19430142 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTACGAATTTACAAGCCATAAAAATGGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * *
19430207 TTGGCATGCAGAAATATGAAGATGTGCCTAAACACACCTAGCACCCTATCGATTCACGGTTTGCG
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * *
19430272 CATCCCGTCTCTCTGGCTGGTGTAGTGCCCGCCCACCGGCCCGCTCATTTCATCGGTTGGCTTAG
648 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * ** * ** *
19430337 GCATACAGAGTTCATTCCTAGTCGAAGATCAAACCGGACCGAGGGTTGTAGCAGCAGGATCAGCA
713 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCA
* * *
19430402 GCACGTAGA-GGGGACCC-AGCTGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAACG
778 GCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG-A-G
* * * **
19430465 CCCGCCCGTACGCTCGTTTCGTTGGTTGACTGAGGCATACAAAGTTCATTCCCAGTCTAA
840 --CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * **
19430525 GCATACGGAGTTCATT-CCAGTCTAAGATCAGACCAGACCGAGGGTTGCCACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*** * *
19430589 CTCAATCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * *** ** * *
19430654 ACCTGACCGACGACATTGAAATTATGGCGATCGGGGGGGCCGGGGGGGTGTACACACATGATGTG
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTG
* * *
19430719 CGATGGGTGCTGGTACTAGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTTGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
19430784 ACCCCCTTAAAGTGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTTAATT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
19430849 GGGGACACTTTTTTTAAATGGTCACAAAATCTTGTAGACTTCGATTTTTTAGCTAAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * *
19430914 TGCATG-CAAAACAAAATGCAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
388 TGCATGCCAACA-AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
** * * *
19430978 AATTTTAAAAAATC-CAGAATTGTAAAAAGTTTCAAAAATAGTGAAAAATAGAAAACGACTCATC
452 AATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
19431042 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
** * * * * *
19431107 CATTGAAATGTACAAATATAAAGATGTGCCTAAACCCACCTACCACGCTATCGATCTACGGCTTG
581 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
** *
19431172 CGCATCCCGTCTCTCTGGCCGATGTAGTGCCTGCCTGCCCGCCCGCCCACCCTCCCGCCCGTTTC
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTG-C--CC-GCCCGCCCG--------CCCGCTCGTTTC
* * * * * *
19431237 GTCAGTTGGCTTAGGCATACGAAGTTCAATCCCAGTGTAAGATCTGACCAGATCGAGGGTTGCGG
699 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGG
* * * * * * * * *
19431302 TAGCAGGATCGGCAACACGCAGTGGGGGACCCGATCGATCTCGGGCTTGCACGTCCTGCCCCTCT
764 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * * * * *
19431367 GGCTGGCTGAGTGCTCACACGCTTGTTTCGTGGGTTGACTTAGGAATACGGAGTTCATTCCCAGT
829 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
19431432 CTAA
894 CTAA
* * **
19431436 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAAGGTTGCGGCAGCACATATTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** *
19431501 CT-CGACCATGTGCTGGTGCCACATTTTTCTTCACCGGGG---CA---C----CATCGTCGGAGA
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGA
* * *
19431555 ACCTGACCGGCGGCATTGGGGTTTCGGCGATCGGGGGGGCCGGGGGGTGTGTGCACATGATGCGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
19431620 GATGGGTGCTGGTACTTGGCCGTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19431685 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACCATTAAAGTGTATAAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* ** * *
19431750 GAGACTTTTTTTTCAAATGGTCACAAAAACTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * *
19431815 GCACGCCAACAAAAATACAAGGATCACGGCTACCAAGTTAGGGGCCAAAACTCCTTTCGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * * *
19431880 -TTTAAAAAATCTAGAACCGTAAAAAGTTTCAAAACTCGTGAAAAATAGAAAATGAGTTGTCTTC
454 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
19431944 CCATGAAACTTCACGTG-AGGTCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 CCATGAAACTTCACGTGAAGG-CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* **
19432008 TTGACACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * ** * * * *
19432073 CATCCCGTCTCTTTGGCCAGCGTAGTGCCCGCCCGCTTGGCCGCTCGTTCCGTCTGTTGGCTCAG
648 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * * * *
19432138 GTATACGGAGTTTATTCCCCA-TCCAAGATCGGTCCAGACCAAGGGTTGTGGCAGTAGGATCGGC
713 GCATACGGAGTTCATT-CCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGC
* * *
19432202 AGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCCAG-CCCTCTGGCCTGCTGAGC
777 AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCC-GCCCCTCTGGCCGGCTGAGC
* * * *
19432266 ACCCGCACGCTCGTTTCGTAGGTTGACTTAGGTATATGGAGTTCATTCCCAGTCTAA
841 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19432323 TCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATCAAGGGTTACGGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
19432388 C-CCGGCATGTGCTGGTGCTGTATTTTTCTTCACGGGGGCACCATCGTCGGAGCATCGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTCTC-GGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * **
19432452 ACCTGACCGGCGGCATTGGGATTCTGGCGATCGGGGGGGGGTCGGGGGGTGTGTACACATGATGT
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATC--GGGGGGGCCGGGGGGTGTGCGCACATGATGT
*
19432517 GCGATGGGTGCTGGTACTTGGCCCTTATATTCG-CCCCTATCCCTCATCAAACCTCGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
19432581 CAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
19432646 TGGGGACATTTTTTTCAAATGGTCACAAAAACTTGTACACTTCGAG-TTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19432710 ATGCACGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
19432775 AA-TTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCT
452 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19432839 TCCCATGAAACTTCACGTG-AGGTCTTAAGGGACCATTGTATGAATTTACAAGCCATGAAAATGG
517 TGCCATGAAACTTCACGTGAAGG-CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * * *
19432903 CATTGGCATGTAGAAATATCAAGTTGTGCCTAAACCCACCTACCACCCTATCGATTCACGACTTG
581 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
19432968 TGCATCCCGTCTCTCTGGCTGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * ** *
19433033 AGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGATCGAGGGTTATGGCAACAGGATCGG
711 AGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGG
* ** * * * *
19433098 CAACACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCACCCTTCTGGCCTGCTGAAC
776 CAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
*
19433163 GCCCGCACGCTCGTTTCATGGGTTGAC-T-----TA--G-G--CA-T---A--C---
841 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
19433200 G--T----AGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGT
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * **
19433259 CTCGGGCATGTGCTGGGGGCCGTATTTCTCTTCGCCGGGGGCACCATCGCTGGATCATCACCGGG
66 CTCCGGCATGTGCT-GGTGCCGTATTTTTCTTC-TC-GGGGCACCATCTC-GGAGCATCGTC-GG
* * * * * * * *
19433324 AGAAACCTGACCGACGACATT-GAGTT-CGCCTAT-TGGGGGGCCGAGGGGTGTGCGCACACGA-
126 AG-AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGAT
*
19433385 GTGGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTGGAGAAC
190 GT-GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * *
19433450 CCACACCCCCTGAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAG-AGCCATTAAAGTGTCTG
254 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
19433514 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACATTTCGAGTTTTTAGCTAAATTGT
319 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * ** * **
19433579 TTTGTGCAAGCCAATAAAAATACAAGGATCACGTCTACCATGTTTGAAGCCAAAAATCCTTCTAA
384 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * **
19433644 AAAAATTTAAAAAAATCTCGAATCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCG
449 AAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
**
19433709 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGGGCATTGTATGAATTTACAAGCCATAAAAAT
514 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
*
19433774 GCCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATGTGCCTAA
579 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC-----G-----
*
19433839 ACCCACCTACCACCCTATCGATCAACGACTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG
634 ----A--T-----CC-A-CG------G-CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* *
19433904 CCCGCCCGCCCGTCCGCTCATTTCATCGGTTGGCTTAGGCATAC-GAGGTTCATTCCCAGTCTAA
679 CCCGCCCG--C--CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA-GTTCATTCCCAGTCTAA
* ** * ** * * * **
19433968 GATTGGACTGGACCGAGGGTTACGGCAATAGGATCAGCAACGCGCAGAGGGGGACCCGGTCGATC
739 GATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATC
* * * * *
19434033 CTCGGCTTAG-GCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTGAGTTCAC
804 CCCGGCTT-GCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
19434097 TTAGGCATACGGAGTTCATTCCCAGTCTAA
868 TTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19434127 GCATATGAAGTTCATTCCCACTCTAAGATCGGACCTGACCGAGGGTTTCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * **
19434192 GT-CGAGCATGTGCTGGTGCCGTATTTTTC-T-TC---G-----TC-CGGAGTAACGTTAGAGAA
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTCTCGGGGCACCATCTCGGAGCATCGTCGGAGAA
*** * * * *
19434245 CCTGACCGATAGCATTAGGGTTCCGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTACG
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
*
19434310 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCTCGAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
19434375 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
19434440 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * *
19434505 CATGCCAAAAAAAAATACAATGATCACGTCCACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAA
390 CATGCC-AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG-AAAAA
* * * * **
19434570 AGTTTAAAAAATCTCGAACCGCAAAAAGCTTT-GAAAATTGCAAAAAATAGAAAACGAGTCGTCT
453 ATTTTAAAAAATCTCGAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* * * *
19434634 TGCCATGAAACTTCACATGAAGGCTTACGGGACCATTGTATGAATTTATAGGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * *
19434699 ATTGGCACT-CAAAAATCTGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTA
582 ATTGGCA-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * *
19434763 CACATCCCGTCTCTCTGACTGGCGTAATGCCCACCTGCCCGCCCGTCCGCTCATTTCGTCGGATG
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-GCCCGCCCGCCCGCTCGTTTCGTCGGTTG
* * * * * * * * *
19434828 GCTTAGGCATACAGAGTTCATTCCCAGTCTAATATCGGATCGGACCTAAGGTTACGGTAGCAGGG
707 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGA
* * *
19434893 TTGGCAGTACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
772 TCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* *
19434958 GAACGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
837 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * *
19435019 AAATACGGAGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCT--G
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
19435082 -T----CA-------------TATTTTTCTTCGCCGGGG---CA---C---G-ATCGTCGGAGAA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* * * * * * *
19435119 CCTGACCGACGGTATTAGGGTTCCGGCGATC-AGGGGGTC-GGGGGTGTGCACACATGATGTGCC
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* *
19435182 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATTAAACCTCGAGAACTCACAA
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
19435247 CCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTA-CCATTAAAGTGTCTTAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
*
19435311 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGTGTTTTTAGCTGAATTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* *
19435376 CATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGACCAAAACTCCTTCCGAAAAAA-
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * * *
19435440 TTTAGAAAAATCCCAAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
455 TTTA-AAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
19435505 CCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA-AAAAATTGGCA
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA-TGGCA
*
19435569 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATAC-ATCCACGGCTTGC
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT-CGATCCACGGCTTGC
* * * * *
19435633 GCATCCCGTCTCTCTGGCCAGCGTATTGCCCACCTGCCCGCCCGCTCGTTTCATCGGTTGGCTTA
647 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * * * * *
19435698 GGGATACGGAGTTCATTCCCAGTCCAAGATCGGACCGGACCGAGGGTTGCAGCAGCAGGATTGAC
712 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGC
* * * * *
19435763 AGCACGCAGAGGGGGACCCGACCAATCCCCAGCTTGTGCATCCCGCTCCTCTGGTCGGCTGAGCG
777 AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* *
19435828 CCCGCACG--C---TC----G-T--C-T---CATA---AGTTGA----C--T-TAG
842 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
19435858 GCATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGTAACATATGCTGGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19435923 CTCGGGCACGTGCTGGTGCCGTATTTTTCATCGTCGGGG---CA--T-----CATCATCGGAGAA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* * * * * * *
19435978 CCTGACCGGCGGCATTGGGGTTTCGACGATCGAGGGGG-CTGGGGGTGTGTGCACAGGATGTGCA
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* *
19436042 ATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCTAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
19436107 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
*
19436172 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACA---C------TT---TG-A--GTTTT-T-
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
**
19436220 -A-GCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGAACAAAACTCCTTCCGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * * * *
19436283 TTTAAGAAATCCCGGACCGTAAAAGGTTTCAAAAATCAGTGAAAAATAAAAAACGAGTCGTCTTG
455 TTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATC-GTGAAAAATAGAAAACGAGTCGTCTTG
*
19436348 GCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
*
19436413 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * *
19436478 ATCCTGTCTCTCTGGCTGGCGTAGTGCCCGCCCGTCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
649 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * ** * *
19436543 CATACGGAGTTCATTCCAAGTCTAAGAGCAGACCAGACCGAGGGTTGCGATAGCAGGATCGGTAT
714 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAG
* * * * *
19436608 CACGTAGAGGTGGACCC-AGCGATCCCTGGCTTGCGCATCCCGCGCCTCT----GG-T---CGCC
779 CACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
* *
19436664 TGCA----CGTTTCGTGGGTTGACTTGGGCATACGGAGTTCATTCCCAGTCTAA
844 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** *
19436714 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATTGGACCGAGGGTTGCGGCAGTACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** *
19436779 CT-CGAGCATGTGCTGGGGCCGCATTTTTCTT-TGCCAAGGCACCATCGTCGGAGCATCATCGGA
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTCT--CGGGGCACCATC-TCGGAGCATCGTCGGA
* * * ** * ** * * *
19436842 GAATCTGATCGACGGCATTAAGGTTTCGATGATC-TGGGGGCCGGGCTGGGTGTGTGCACTTGAT
127 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGG--GGGTGTGCGCACATGAT
*
19436906 ATGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
190 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
19436971 CACACCCCTTTAAAGAGCATATGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
19437036 AATGGGGACACTTTTTTCCAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
*
19437101 TTGTGCATGCCAACAAAAATACAAGGATCATGTC-AGCCAAGTTTGGGGCCAAAACTCCTTCCGA
385 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTA-CCAAGTTTGGGGCCAAAACTCCTTCCGA
* * ** *
19437165 AAAAATTTTAAAAAATCTCGAATCGAAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCG
449 AAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
** *
19437230 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGATGATTGTATGAATTTACAAACCATAAAAAT
514 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * * *
19437295 GGTATTGGCAGGCAGAAATATGAAAATGTGCCTAAACCCACCTACCACCCTATCAATCCACAGCT
579 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * *
19437360 TGTGCATCTCGTCTCTCTGGCCAGCGTAGTGCCCATCTGCCCGCCCGCCCGCTCATTTCGTCAGT
644 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-CC--C-GCCCGCCCGCCCGCTCGTTTCGTCGGT
* * * * * *
19437425 TGGCTTAGGCATACGGAGTTCATTACCAGCCTAAGATCAGACCGGATCGAGGGTTGCGGCAGCAA
705 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAG
* * * * ** * * *
19437490 GATCGGTAGCACGCAGAGGGGGACTCGGCTGATCCTTGGCTTACGCATCCCACCCCTCTGGCCGA
770 GATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* *
19437555 ATGAGCGCCCACACGCTCGTTTCGT-GG--G---T-----T---GA---C-TT---AG-----
835 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
19437592 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
19437657 CT-CGAGCATGTGCTGGTGCCATATTTTTCTTCGTCGGGGCACCA--TC---G---C--CGGAGA
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGA
* * * * * * *
19437711 ACCTGACCGACAGCATTAGGGTTCCGGTGATCGGGCGGGCAAGGGGGGTGTGTGCGCACATGAGG
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGC--CGGGGG-GTGTGCGCACATGATG
*
19437776 TGCGATGGGTGCTGGTACTTGG-CCTTCATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
191 TGCGATGGGTGCTGGTACTTGGCCCTT-ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
19437840 TAGACTCCCTTAAAGAGCATTTGAGA-TTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * * * *
19437904 AATGGGGACACTTTTTTCAAATGGTCACAGAATCCTGTACAGTTTGAGTTTTTAGCTGAAATTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
19437969 TTATGCATACCAATC-AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
385 TTGTGCATGCCAA-CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * **
19438033 AAAAATTTTCAAAAATCCCGAAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
449 AAAAATTTTAAAAAATCTCG-AACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
* * * *
19438098 GTCTTGCCCTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTTGCAAGCCATAAGAA
513 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * *
19438163 TGGAATTGGAATGCTA-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGG
578 TGGCATTGGCATGC-AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * * *
19438227 CTTGCGCATCCCATCTCTCTAGCCGGCGTAGTGCCAGCCCGCCCGCCCGCCCCCTCATTTCATTG
642 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCCGCCCGCCCGCTCGTTTCGTCG
* * * * *
19438292 GTTGGGTTAGGCATACGGAGTTGACTCCCAATCTAAGATCGGACCGGACCGA-----G-GGC--C
703 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGC
* *
19438349 ---AT-GGCAGCACGCAGAGGGGGACCCGGCCGA-CCCTCGGCTTACGCATCCCGCCCCTCTGGC
768 AGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCC-CGGCTTGCGCATCCCGCCCCTCTGGC
* *
19438409 CGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTTACTTAGGCATACGGAGTTCATTCCCAGTCTA
832 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
19438474 A
897 A
* * * *
19438475 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGACTGAGGGTTACGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * * *
19438540 CTTGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCCCCATCGCCGGAGCATTGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* *
19438605 ACCTGACCGGCGGCATTGGGGTTCCGGTGATCGGGGGGGGCCGGGGGGTGTGCGCACATCATGTG
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGGCCGGGGGGTGTGCGCACATGATGTG
** * * * * *
19438670 CGATGGGTGCTGGTACTTGGGACTTATACTGGCCCCCTACCCCTCATCAAACCTTGAGAAATTA-
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
19438734 AACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
19438799 GGGGACA-TTTTTTGCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
323 GGGGACACTTTTTT-CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* ** *
19438863 GTGCATGCCAACAAATATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAGCCTTCCAAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
19438928 AATTTTAAAAAA-CCCAAACCGTAAAAAGTTTTC-AAAATCGTGAAAAATAGAAAACGAGTCGTC
452 AATTTTAAAAAATCTCGAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
19438991 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTCATAAAAATGG
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
19439056 CATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCAAGGCTTG
581 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * ** * * * * *
19439121 CGCATCCCGTCTCCCTGGCAGGCGCGGTGCCTGCCCGCTCGTCCGCCCGTTTGTTTCTTCAGTTG
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG--C--CCGCCCGCTCGTTTCGTCGGTTG
* * * *
19439186 GCTTAGGCATACGGAGGTCATTCCCAGTCTAAGATCGGACCAGATC-ATGGGTTGTGGTAGCAGG
707 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGA-GGGTTGCGGCAGCAGG
** * * * * * * *
19439250 ATCAACAACATGTAGAGGGGGACCTGGCCGATCCCTAGG-TTGCACATCCCGCCCCTCTGGCCGG
771 ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCC-CGGCTTGCGCATCCCGCCCCTCTGGCCGG
* *
19439314 CTGATG-ACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
835 CTGA-GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
19439377 GCATACGGAGTTCATTCATAGTCTAAGCATACGGAGTTCGTTCCCAGTCTAAGAGCGGACCGGAT
1 GCATAC-G-G---------AG--T-----T-C--A-----TTCCCAGTCTAAGATCGGACCGGAC
* * * * *
19439442 CGAGGGTTACGGCAGCACATGCTTGGCT-CGAGCATGTGCTGGTGTCGCATTTTTCTTTGTCGGG
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCCG-GCATGTGCTGGTGCCGTATTTTTC-TTCTCGGG
* * * ** *
19439506 GCACCATCACCGGAGCATCATCGGAGAACCTGGCCGGCGGCATTGGCATTCCGGCAATCGGGGGG
103 GCACCATC-TCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGG
* * *
19439571 GCCGGGGGGTGTGCACACATGATGTGCGATGGGAGCCGGTACTTGGCCCTTATATTGGCCCCCTA
167 GCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
19439636 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
232 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
19439701 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
297 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
*
19439766 TTCGAGTTTTTAGCTGAAGTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA-CAATG
362 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAA-G
* *
19439830 TTTGGGGCTAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCTTAAAAAGTTTCAAAAAT
426 TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAAT
*
19439895 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGT
491 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
* * *
19439960 ATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTTCCTAAACCCATC
556 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACC
* * **
19440025 TACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCAGGCCGGTATAGT----GCCCGCCC
621 TACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCC
* * * * * **
19440086 GCCTGCTCGTTTTGTCGGTTGGCTTAGGCATACAGAGTTCATTCCTAGTCTAAAATTTGACC-GA
686 GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-
* * *
19440150 ACCGAGGGTTACGGCAGTAGGATTGGCAGCACGCAGAGGGGGACCC-ATCCGATCCCCGGCTTGC
750 ACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGC
* * * *
19440214 GCATCCCGCCCCTCTAGCCGGCTGAGCGGCCGCACGCTCATTTCGTGGGTTGACTTAGGGATACG
814 GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACG
* * *
19440279 AAGTTCGTTCCTAGTCTAA
879 GAGTTCATTCCCAGTCTAA
* * * * ** * *
19440298 GCATACAGAGTTCATTCCTAGTCTAAGATAGGATCAAACCGAGGGTTGTGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** * *
19440363 CTCGGGCATGTGCCGGTGCCACATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTC-GGAGCATCGTCGGAGA
* * * * *
19440428 ACCTGACCGGAGGCATTGGCGTTCCGACGATC-GGGGGGTCGGGGGGTGTGTGCACATGATGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
** * *
19440492 GACAGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * * *
19440557 CCCCCTTAAAAAGCATTTGAGATTTTACAAGTTTGCTGCCAATAGCCATTAAAGTGTCTAAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * *
19440622 GGAACACTCTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * * * *
19440687 GCATACCAACAAAAATACAAGGATCATGTCTACCATGTTTGTGGCCAAAACTCTTTTCGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * ** *
19440752 TTTTAAAAAATC-CTGAACCGCAAAAAGTCTCAAAAATTATGAAAAATAAAAAACGAGTCGTCTT
454 TTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
19440816 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCTATAAAAATGGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * *
19440881 TTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATTGATCCACTGCTTGCG
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * *
19440946 CATCCCATCTCTCTGGTCGACGTAGTGCCCGCCCGCCCGCCAGCTCGTTTTGTTGGTTGGCTTAG
648 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * *
19441011 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAAACCGAGGGTTACCGCAGGAGGATCGACA
713 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCA
* * * * * * * *
19441076 GCACGCATA-GGGGAGCCGATCGATCCTCGACTTGCGCATCCCGCCCCTCTAGCCAGCTGAGCAC
778 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* *
19441140 CCGCACGCTTGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19441195 GCATACGGAGTTCATTCCTAGTCTAAGATTGGACCGGACCGATGGTTACGGCAGCACTTGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * *
19441260 CTTTGGCATGTGCTGGTGCCGTATTTTTCTTCGCGGGG-A--A---C----CATCGCCGGAGAAC
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTCTCGGGGCACCATCTCGGAGCATCGTCGGAGAAC
* * *
19441315 CTGACCGGCGGCATTGGGGTTCCGGCGGTCGGGGGGGCCAGGGGGTGTGCGCACAGGATGTGCGA
131 CTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
19441380 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
196 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
*
19441445 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAATGGG
261 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
19441510 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
326 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * * * *
19441575 ATTCCAATAAAAATACAAGGATCACGTCAACCAATTTTGGGGCCAAAACGCCTTCCGAAAAAATT
391 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATT
* * ** * *
19441640 TTAAAAAATC-CTGAACCGCAAAAGGTTTTGAAAATCGTGAAAAATAAAAAATGAGTCGTCTTGC
456 TTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
*
19441704 CATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
520 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * *
19441769 GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCATGGCTTGCACA
585 GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * *
19441834 TCCCGTCTCTCTAGTCGACGTAGTGCCCGCCCGCCTGCCCGCCCGCTCGTTTCGTCGATTGGCTT
650 TCCCGTCTCTCTGGCCGGCGTAGTGCCCG--C-CC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTT
** *
19441899 AGGCATACGGAGTTCATTCCCAGTCTAAGATCGGGTCAGACCGAGGGTTGCGGCAGCAGGATTGG
711 AGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGG
* ** * * *
19441964 CAGCACACAGAGGGGGACCCTCCCTATCCCCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGC
776 CAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
* * ** *
19442029 GCCCGCGCGCTCGTTTCGTGCGTTGACTTAGGCATACACAGTTCATTCCC-GATCTGA
841 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG-TCTAA
* * * * * * * *
19442086 GCAAACGGAGTTCATTCTCAGTCTAAGATCGAATCAGACCGAGGGCTGTGGCAGCACATGCTTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
19442151 CTCGGGCATGTGCTAGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATTG-CTGGAG
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTC-GGAG
* * *
19442215 AACCTGACCGGCGGCATTGGGGTTCTGGCGATCGGGGGGTCGGGGGGGTGTGCGCACATGATGTG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* * * *
19442280 TGGTGGGTGCTGGTAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
19442345 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
19442410 GGGGACACTTTTTGCAAATGGACACAAAATCTTGTACACTTCGAGTTTTTATCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
19442475 TGCATGCCAACAAATATACAAGGATCACGTCTACCAAGTTTGGGGCTAAAAGTCCTTCCGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * ** *
19442540 ATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTT
453 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
19442605 GCCATGAAACTTCACGTGAAGGCTTAAGGGGCCATTGTATGAGTTTACAAGCCATAAAAATGGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
19442670 TTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCG
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* *
19442735 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCCGTCGCCCACTCGTTTCGTCGGTTGGCT
648 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC-GCC--CGCCCGCTCGTTTCGTCGGTTGGCT
* ** * * ** *
19442800 TAGGCATACGAAGTTGTTTCCCAGTCTAAGATCGGACCGGACCAAAAGTTGCGGCAGTAGGATCG
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCG
* * * * * *
19442865 GCAACACGCAGAGGGGGCCCCGACCAATCCCCGTCTTGCACATCCCACCCCTCTGGCCGGCTGAG
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * * *
19442930 TGCCCGCACGCTCGTTTCATGGGTTGACTTAGACATACAGAGTTCATTCCCAGTCTAG
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19442988 GCATACGGAGTTCATTTCCAGTCTAAGATCGGACCGGACCGAGGGCTGCAGTAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19443053 CT-CGAACATATGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCGTCGGAG
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAG
* * * * * ** * * * * *
19443117 AACCTAATCGACGGTATTTGGGTTCCGATGATCGAGGGGGCTGGGGGGACCCTCCCTATCCCCAG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGG--------TGTGCGCA-
* ** * **
19443182 CTTG-TGCATCCCGCCCCTCTGGTCTGCTGAGTACCCGCACGCTCGTTTCGTGGGT-TGACTTAG
184 CATGATG--T---G---CGATGG-GTGCTG-GTACTTG---GC-C----C-T---TAT-A-TT-G
** * ** ** ** ** * *
19443245 GCATACACAGTTCATTCCCGGTC-T-AAGCAAACG-GAGTTCATTCCCAGTCT-AAGATCGA-AT
224 GC---C-C-CCT-A-TCCC--TCATCAAAC-CTCGAGAACTCACACCCCCT-TAAAGAGC-ATTT
* ** * * * * **** * * ** *
19443305 CAGA-TCGA-GGGCTGTGGTAGCACATGCTTGGCTCGGGCATGTG-CT--AGTGCCG-CATTTTT
277 GAGATTTTACAGG-TTTGCT-GC-CA-G--TAGC-CATTAAAGTGTCTGAAATGGGGACACTTTT
** * * *** ** *** * * * * *
19443364 CTTCGTCA-GGGCACCATCGCCAG-AGCA-TTGCCGGAGAACCTGACCGGCGGCATTGGGGTTCT
335 -TTC-AAATGGTCACAAAATCTTGTA-CACTT--C-GAG-TTTTTA---GCTGAATT---TTTTT
* ******** * * ** * ** ** *
19443426 G-GCGATCGGGGGGTCGGGGGGTGTGCGCACATGAT-GTGTGGTGGGTGCTGGTAGTT-GGCCCT
387 GTGC-AT------GCCAACAAAAAT--ACA-AGGATCACGT-CT---ACCAAGT--TTGGGGCC-
** * * ** ** * * * * * *
19443488 TATATTGGCCCCCTATCCCTCATCAAACCTTAAGAACTCAC-ACCCCCTTAAAAAGCATTTGAGA
435 -A-A---AACTCCT-T-CC-GAAAAAATTTTAAAAAATCTCGA--ACCGTAAAAAG--TTTCA-A
* * * ** * * * * **
19443552 TTTTACAGGTTTCCTGCCAGTAGACATTAAAATGTGTAAAATGGGGACACTTTTTTCAAATTGTC
487 ----A-A------AT--C-GT-G--A--AAAAT-AG-AAAA---CGAGTCGTCTTGC-CA-TGAA
*** * * ** ***** * * * * * * * *
19443617 ACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGATTTTGTGCATGCCAAAAAAAAT-ACA-A
526 ACTTCA-CGTGAAGGCTT-AAGGGACCA-TTGTATGA-ATT-TACAAGCC-ATAAAAATGGCATT
** ** * * * * * ** *** ***
19443680 GG-AT-CACG-TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAA
585 GGCATGCA-GAAATATGAAG-AT-GTGCCTAAAC-CC-ACC--TACCACCCT-ATCGATC-C--A
* **** *** **** ****** * * * * ** * **
19443742 C--CGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAATG--AG-TCGTCTTGCCATGAAAC--T
639 CGGCTTGCGCA-TCCCGTCTCTC-TG-GCCGGCG-TAGTGCCCGCCCG-CCCGCC-CG-CTCGTT
** * * ** * * * ** * ***
19443800 TC-TCGTGAAGGCTTAAGGGACCAT-TGTA-TGAATTTTCAAG-CCAA-A--AAAAC-GACATTG
697 TCGTCG-GTTGGCTT-A-GG--CATACGGAGTTCA-TTCCCAGTCTAAGATCGGACCAGACCGAG
** *** ** * * ****** * * *
19443857 GCATGCAAAAATATGAAGAT-GTGCCTA-AACCCA-CCTATCACCCTATCGATCCACGGCTTGCG
756 GGTTGCGGCAGCA-G--GATCG-G-C-AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCG
* * * * * * * * *
19443919 CATCCCGTCTCTCTAGTCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
815 CATCCCGCCCCTCTGGCCGGC-T-GAG--CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCAT
** *
19443984 ATAGAGTTCATTCCCAGTGTAA
876 ACGGAGTTCATTCCCAGTCTAA
* ** * * * * * * ** **
19444006 G-ATTAGATCGGACTGAGAGTT-GCAG-CAGTAGGATCAG-CAGCACGCAGAGGG-GGACCCCCC
1 GCA-T--A-CGGAGT-TCA-TTCCCAGTC--TAAGATCGGACCGGAC-C-GAGGGTTG-CGGCAG
** * * * * * * *** *
19444066 CGATCCCCGACTTGCGCATCCCGCCCCTTTGGCCGGCTAAGCGCCCGCACGCTTATTGCGT-GGG
55 C-A--CATG-C-TGGGC-T-CCG-GCATGT-GCTGG-T----G-CCGTATTTTTCTT-C-TCGGG
* * ** * * * * * **
19444130 TTGACTTAGGCAT-ACGGAGTTCATTCCCAGTCTAAG-ATC-AAAC--TGG-ATCGAGGGTTGTG
103 --G-C--A-CCATCTCGGAG--CA-T--C-GTCGGAGAACCTGACCGGCGGCATTG-GGGTTCCG
* *** *** * * ** * * *
19444189 GCAGCA-CATGCTTGGCTCAGGCATGTGCTGGTGTCGCATTTTTTTCG-TCGGAGCATCGTCGGA
155 GC-G-ATC-GGGGGGGC-C-GGGGGGTG-T-GCG-CACATGATGTGCGAT-GG-G--T-G-CTG-
* * * ** *** * ** **** * *** *** *** * *
19444252 GAACCTGACCGATAGTATTGGGTTCCGA-CGATC-TGGGGGCC-CGGGGGGGT-GTGCGGACATG
205 GTACTTGGCCCTTA-TATTGGCCCCCTATCCCTCAT-CAAACCTC-GAGAACTCACACCCCCTTA
* * ** * * ** * ** ** * * **
19444313 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA-CCTC-GAG
267 AAGAGC-ATTTGAGATTTTAC-AGG---TT-TGCT-G-CCAGTA--GC-CATTAAAGTGTCTGA-
*** * ** *** * *** * **
19444376 AACT-CACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC-CATTAAAGT
320 AA-TGGGGACACTTTTTTCAA--A--TG-G---TCACA-AAAT-CT---TGTA-CAC-TTCGAGT
** ** * *** * * * ** *
19444439 GTGTAAAATGGGGACACTTTTTT-CAAATGGTC-ACAAAATCTTGCACA-CTTCGA-GTTTTTAG
369 -T-T-TTA-GCTGA-ATTTTTTTGTGCAT-GCCAACAAAA--ATACA-AGGATC-ACG--TCTA-
* * * * ** ** * ***
19444500 CTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGCCAAAA-CTC
421 C-CAA---GTTTG-G--GGCC---AAAACT-C---CTTC-CG---AAAAAATTTTAAAAAATCTC
*** * * * * * ** * *****
19444564 CTTCTGAAAAAATTTTTAAAAAATACCGACCCGTAAAAAGTTTCAAAA--A-TTGT-GAAAAATA
468 GAACCGTAAAAA-GTTTCAAAAAT--CG---TG-AAAAA--TAGAAAACGAGTCGTCTTGCCAT-
* * * * * * * **
19444625 GAAAACGAGTCGTCTTGCCATGAA-ACTTCACGTGAAGGC-TTAAGGGACCAATGTATGAATTTT
523 G-AAAC---T--TC---ACGTGAAGGCTT-AAG-GGA-CCATT---GTATGAAT-T-T--A----
*
19444688 CAAGTCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
565 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * *
19444753 ATCGATCCATGGCTTGCGCATCCCGTCTCTCTAGCAGGAGTAGT--------GCCCGCCCGCTCG
630 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCG
* * * * * * * *
19444810 TTTCATCGGTTGGCTTAGGCACATGGAGTTAATTCTCAGTCTAAGATCAGACCAGACCGAAGGCT
695 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * * * *
19444875 ACAGCAGCAGGATTGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCC
760 GCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
* * * ** * *
19444940 CTCTGGCTGGCTGAGCGCCCGCACGTTCATTTCAAGGGTCGGCTTAGGCATACGGAGTTCATTCC
825 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
19445005 CAGTCTAA
890 CAGTCTAA
* * **
19445013 GCATACGGAGTTCATTCCCAATCTAAGATTGGACCAAACCGAGGGTTGTC-GCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG-CGGCAGCACATGCTGG
* * * * * * *
19445077 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGGCATCATCGCCGGAGCATCGCCGAAG
65 GCTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAG
* * * * * **
19445142 AACTTGACTGACGGCATTGGGGTTTCGGTGATCGGAAGGGCCGGGGGGGTGTGCGCACATGATGT
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGT
*
19445207 GCGATGGGTGCTGGTACTTGGCCCTTATATTGCCCCCCTATCCCTCATCAAACCTCGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * *
19445272 CACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTACAGTTTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
19445337 TGGGGACACTTTTTTCAAATAGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
19445402 ATGCATGCCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGGCCAAAACTCCTTTCGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * ** * *
19445467 AATTTTAAAAAATCTCGAACCGCAAATAGTTTTGAAAATCATGAAAAATAGAAAATGAGTCGTCT
452 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19445532 TGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*** * *
19445597 ATTGGCACATAGAAATATGAAGATGTACCTAAACCCACCTACCACCCGATCGATCCACGGCTTGC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
19445662 GCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCACCCGCCCGCTCATTTCATCGGTTGG
647 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG----CCCGCCCGCTCGTTTCGTCGGTTGG
* * * ** * *
19445727 CTTAGGCATACGGAGTTCACTCCTAGTCTAAGATCAGA-CAGATTGAGGGTTGCGGTAGGAGGAT
708 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * *
19445791 CGGCAACACGTAGAGGGGGACCCGACCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCAGCTG
773 CGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * * *
19445856 AGCACCCGTACGCTCGTTTCGTGGGTTCACTTAGGCATATGGAGTTCATTCCCGGTCTAA
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
19445916 GCATACGGAGTTCATTCCCGGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGAATCAGAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---------A--C------CG-----GAC
* * * **
19445981 CGAGGGTTACGACTGCACATGCTGGGCTTGGGCATGTGCTGGTGCCGTATTTTTC-T-TC---G-
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCCGGCATGTGCTGGTGCCGTATTTTTCTTCTCGGGGC
* ** * * *
19446040 ------TCGAAGCATCAACGGAGAACCTGACCGACGGTATTGGGGTTCCGACGATCGGGGGGGGC
105 ACCATCTCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGGC
* * *
19446099 CGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATCTTTGCCCCCTATC
169 CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
* *
19446164 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCCTTTGAGATTTTACAGGTTTGCTACC
234 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
19446229 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
299 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* * *
19446294 CGAGTTTTTAGCTGAATTTTTTTGCGCATGCCAATAAAAATACAAGGATCACGTCTACTAAGTTT
364 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT
* * * ** * * *
19446359 GGGGCCAAAAATCCTTTCGAAAAAATTTAAAAAAATCTCGAATTGCAAAAAGTTTCGAAAATCAT
429 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGT
* * * * * *
19446424 GAAAAATATAAAACAAGTCGTCTTGTCATGAAACTTCATGTGAATGG-TTAAAGGACCGTTGTAT
494 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA-GGCTTAAGGGACCATTGTAT
* ***
19446488 GAATTTACAAGCCATAAAAAAGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTA
558 GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTA
** * * * * *
19446553 CCGTCTTATCGATCCACGTCTTACGCATCCCGTCTCTCTGGCCAGTGTAGTGCCCGCACACCCGC
623 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG----CCCGC
* * * * * ** * *
19446618 CTGCCCGCTCGTTTCATCGGTCGGCTTAGGCATATGGAGTTCATTCCCAGTCCAAGATCAAATCG
684 CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCA
* * * * * *
19446683 GACTGAGGGTTGTGGTAGCAGGATCGGCAGCATGTAGAGGGGGACCC-AGCCGATCCCCGGCTTA
749 GACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTG
* * *
19446747 CGCATCTCGCCTCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAAGCATAC
813 CGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
*
19446812 GGAGTTCATTGCCAG--T--
878 GGAGTTCATTCCCAGTCTAA
* ** *
19446828 -C-TA---AG---A-T--C---C---GATCGGACC--A---AGGGTTACGATAGCACATTCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** *
19446871 CT-CGAGCATGTGCTAGTGCCACATTTTTC-T-TC---G-------TCGGAGCATCGCCGGAGAA
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTCTCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* * * * *
19446923 CCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGAGGGGTGTACGCACATGATGTTCG
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * *
19446988 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCGCTCATCAAACCTGGAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * * * *
19447053 CCCCTTAAAGAGCATTTGGGATTTTACAAGTTTGCTACCAGTAGCCATTAAAGTATCCGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * * * * **** *
19447118 GGACACCTTTTTGAAATGGTC-CTAAACCCA-CCTGCCACCCTATCGA-TCCACAGCTTGCGCAT
325 GGACACTTTTTTCAAATGGTCAC-AAA---ATCTTG-TACACT-TCGAGTTTTTAGC-T--GAAT
* * ******* ** *** * ** ** *
19447180 CCCGTCTCTTTG-GC-TGGCATA-GTGCCCGCCCGCCCGCCCGTCCGCTGA-TTTCGTCGGTTGG
381 ----T-TTTTTGTGCATGCCA-ACAAAAATACAAG-GATCACGTCTACCAAGTTT-G--GG--GC
** ** * * * **** ** * * * ** *
19447241 C-TTAGGCATACAGAGTTCATTCCTAGTCTAAGATC-AG-ACCAGATTAAGGGTTACGGTAAGAG
434 CAAAACTCCTTCCGAAAAAATT--T--TAAAAAATCTCGAACC-G-TAAAAAGTTTC---AA-A-
* * ** * * * ***
19447303 GATCG-GTAGCACGTAGAGGGGGACACGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC-C
488 AATCGTG-A-AAAATAGA-----AAAC-G-AG-T---CGTCTTGC-CAT---GAAACT-T--CAC
*** * * ** * * * *** *
19447366 GACTG-AGTGCCCGCA-CG-CTCATT-TCGTGGGTTGACTTAGGCATACGGA-GTTCATT--C-T
533 G--TGAAG-G-CTTAAGGGAC-CATTGT-ATGAATTTAC-AAGCCATAAAAATG-GCATTGGCAT
* * * ** * * * * *
19447423 AGTCTA-AGCATACG--GA-GT-TC-ATTCCCAGTCTA--A--GTTTGGACTGCGC-CGAGGGTT
590 -G-C-AGA-AATATGAAGATGTGCCTAAACCCA-CCTACCACCCTATCGA-T-C-CAC--GGCTT
* * * * * * * * * * * * *
19447477 GCGGTAGCACAT-ACT-GGGCTCGG-GCATGTG-CTG---G--TGCCAC-AT-TTTTCTTCGCCT
645 GC-GCATCCCGTCTCTCTGGC-CGGCGTA-GTGCCCGCCCGCCCGCC-CGCTCGTTTCGTCG-GT
* * * ** * ** * * *
19447531 GGGC--ACG-ATCATCGGA--CCA-T--CAG-CGGAGAACGTGACCAGTGGCGTTGGGTTTCCGT
705 TGGCTTAGGCAT-A-CGGAGTTCATTCCCAGTCTAAGATCG-GACCAG-ACCG-AGGG-TTGCGG
* * * * * ** ** ** *
19447587 CGATCGAGG--GGGCCGGGA-G-GGAGGTGTGTGTACATGATGTGTGATGGGTGCTGGTACTTGG
764 C-AGC-AGGATCGG-CAGCACGCAGAGG-G-G-G-ACCCGA---CCGAT---CCCCGG--CTT-G
* *** ** *** ** * * * ** * **
19447648 CCCTTATATTGGCCCCCTATCCCTAATCAAACTTCGAGAACTCACATC-C-CCTTAAAGAGCATT
813 CGC--AT-CCCG-CCCC--T--CT-GGCCGGC-T-GAGCGCCCGCA-CGCTCGTT-TCGTGGGTT
* ** * * * ** * **
19447711 GAGGTTTTACAGGTTTGCTGCCAGTAGCAATT-AAAGTGTTT
865 GA---CTT--AGGCATAC-G-GAGT-TC-ATTCCCAGTCTAA
* * * * ** * * * ** * *
19447752 GAAATAGGGACACATT-TTTCAAATGGTCACAAAATCTTGTA-C--ACTTCGAGTTTTTAGCTGA
1 G-CATACGG--A-GTTCATTCCCA--GTC-TAAGATC--GGACCGGAC--CGAG-GGTT-GCGGC
** * ** ** ** * * * ** *** *
19447813 AGCTTTTTATGCAT-GCCAAC-AAAAATACAAGGAT-CACG--TCTACCAAGTTGGGGCAAAAAC
53 AGC---ACATGC-TGGGCTCCGGCATGTGC-TGG-TGC-CGTATTTTTCTTCTCGGGGC----AC
* * ** ** * *** * * * **** ****** ***
19447873 TCCTTTCAAAAAAT-TTTTAATAATCCTGAAC--C-GTA-AAAAGTTTTAAAAATCGTGAAAAAT
107 -CATCTCGGAGCATCGTCGGAGAA-CCTGACCGGCGGCATTGGGGTTCCGGCGATCG-G---GGG
* ***** * ** * ** ** * *
19447933 AGAAAACGAGTCGT-CTTACCATGAAACT-TCACG-TCAAG-GCT--TA-AGGGACCATTGTA-T
166 GGCCGGGGGGT-GTGCGCA-CATG--A-TGT-GCGAT-GGGTGCTGGTACTTGG-CCCTTATATT
***** * * * * * * * * **** * * * **
19447990 GAATTTACAAGCCAT-A-AAAATGGCATTG-GGA-TGCAGA-AATATAAAAATGTGC-CTAAACC
223 G-GCCCCCTATCCCTCATCAAA---CCTCGAGAACT-CACACCCCCT-TAAA-GAGCATTTGA--
* ** * * * * * *** * ** * * * * * ** *
19448049 CA-CCTACCACCCGATCGAT-CCACGGCTTGCGCA-TCCCGTCTCTCTAGTCGGCATAGTGCCTG
279 GATTTTA-CA--GGTTTGCTGCCA--G-TAGC-CATTAAAGTGTCTGAAATGGGGACACT-TTTT
* ***** * ** * * * * *
19448111 CCCGCCCGTCTGCCCACTCGTT-T-CA--TCG-GTTGGCTTAGGCATACGGAGTTCATTCCTAGT
336 TCAAATGGTC-ACAAAATC-TTGTACACTTCGAGTT--TTTA-GC-T---GAATT--TT-TTTGT
* * * * ** * * * **
19448171 -CTAAGATCAGACCGAAATGAGGGTTACAGCAGTAGGATCGGC-AACACGCATAGGGGGACCCGA
389 GC-ATG-CCA-A-C-AAA--A---ATACA--AGGATCA-CGTCTACCAAG--TTTGGGG--CC-A
** * * * *** ******* * * * * **** ***
19448234 TCGATCCCCGGCTTGCG-CATCCTGCCCTTCAGTCGGTTGAGCGCCTGCACGCTCGTTTC-ATGG
436 ---AAACTC--CTTCCGAAAAAATTTTAAAAAATC--TCGA--ACC-GTA-AAAAGTTTCAAAAA
* ** * * * * * * *
19448297 GC-TG--ACTTAGGCATACG-GT-GTTCATTCCCAGTCTAAGCAT-ACG-G-AGTTCATTCCAAG
490 TCGTGAAAAATA-GAAAACGAGTCG-TC-TTGCCA-T-GAAACTTCACGTGAAG-GC-TT--AAG
* ** * * * * * ** * * *
19448354 TCGAAGATTGGACCGGACCGAGGGTTGCGGCAGCACAT---GCTGGGC-TCGGGCATG-TG--CT
546 -GGACCATTGTA--TGA---A--TTTAC--AAGC-CATAAAAAT-GGCAT-TGGCATGCAGAAAT
* ** * ** **** ***** * * **** *
19448412 GGTGCCGCATTTTTCTTCGTCGGGGAACCATCGTCTGT-GCATCGC-CGGAGAAC-CTAATCGGC
598 -ATGAAG-ATGTGCCTAAACCCACCTACCA-C-CCTATCG-ATC-CACGGCTTGCGC--ATC-CC
* * * * *** *** ** * * *
19448474 GGCAT-TGTGGTTCCGATGATCG-AGGGGGCCGGGGGGGTGTGCGCACATGTGTGCGATGGGTGC
654 GTC-TCTCTGG--CCG--G--CGTA-GTGCCCGCCCGCCCGCCCGCTC--GT-TTCG-TCGGT--
* **** * * ** * ***
19448537 TGGTACTT-GGCCCTTATATTGGCCCCCTATCCCTCA-TCAAACCTCGAGAACTCACACC--CCC
705 TGG--CTTAGG--C--ATA-CGGAGTTC-ATTCC-CAGTCTAAGATCG-G-AC-CAGACCGAGGG
* *** *** ** * *** * * ** ** * *** *
19448598 TTAACGAGCATTTGAGATTTTACAGGTTTC-CTG-CCAGTAGCC-ATTAGAGTGTCTGAAATGGG
758 TT-GCG-GCAGCAG-GA-TCGGCA-G-CACGCAGAGGGGGACCCGA-CCGA-TCCCCGGCTTGCG
* * ***** * * * *** ** * * * ** ** *
19448660 GA-CACTTTTTTCAAATGGTC-AC-AAAATCTTGTACACTTCAAGTTTTTAGCTGAATT-TTTTT
815 CATCCCGCCCCTC---TGGCCGGCTGAGCGCCCGCACGC-TC--G--TTTCG-TGGGTTGACTTA
** * * **** *
19448721 GCGCATGCCAACAAAAATACAAGGATCATGTTTACCAA
871 G-GCAT----AC-GGAGTTC-ATTCCCA-G--T-CTAA
** ** ** * * * * * * * ** **
19448759 GTTTGGGACCAAAAATCGTTCCGAAAAAATTTTTAAACATCCCGAACCACGA-AAAGTTTTGAAA
1 GCAT---A-CGGAGTTCATTCC-----CA-GTCT-AAGAT--CGGACC-GGACCGAGGGTTG---
* ** * ** * * * ** ** *** **
19448823 ATCGTGAAAATAGAAAAC-GAGTCATCTTGCCATGAAACT--TAACGTGA--AGGC-T-TAAGGG
49 --CG-G-CAGCA-CATGCTG-GGC-TC-CGGCATG-TGCTGGTGCCGT-ATTTTTCTTCTCGGGG
* * * * ***** ** * * ** *
19448881 -ACCAT-T-GTATGAAT-TTAC--A-AGCCAT-AAAAATGGCATT-GGCATGCAGAAATATGAAG
104 CACCATCTCGGA-GCATCGT-CGGAGAACC-TGACCGGCGGCATTGGGGTTCCGGCGAT-CG--G
** * ******** * * * * * * * *
19448937 ATGTGCCTAAACCCACCTAC-CACCCT-ATCAAT-CCACGGCTTGCGCATCCCGTCTCTCTGGTC
163 GGGGGCC--GGGGGGTGTGCGCA-CATGAT--GTGCGATGG---GTGC-T--GGT-ACT-TGG-C
* * **** * * * * *** * * **** *
19448999 GGCGTAGTGCCCGCCCGCCCACCCGCCCGCTCGTTCCGTCGATTG-GCTTAGGCATACGGAGTTC
214 -CCTTA-TATTGGCCC-CCTATCC-CTC-ATCAAACC-TCGA--GAAC-T---CACACCCCCTTA
**** * * *** *** * * ** * * **
19449063 ATTCTCAGTCTAAGATCAGACCAGACCGAGGGTTG-CGGTAG-CAGGATCAGCAG-CACACAGAG
267 AAGAGCA-TTTGAGATTTTA-CAG---GTTTGCTGCCAGTAGCCATTA-AAG-TGTCTGA-A-A-
* * *** * ** * * ** * * * **** *
19449125 GGGGGACCCGGTCGATCCCCA-GCTTAC-GCATCTCG-ACCCTCTGGCCG-GCTGAGCGCCCGCA
322 TGGGGACAC--TTTTTTCAAATGGTCACAAAATCTTGTACACT-T---CGAGTTTTTAG-CTG-A
* * * ** * ** *
19449186 CGCTCGTTTTGTGGGTTGACTTAGGCGTACGGAGTTCATTTCCAGTCTAA-GATCGAAC--CGGA
379 --AT--TTTT-T-TG-TG-C--ATGCCAAC--A---AAAAT--A--C-AAGGATC--ACGTC-TA
* * * ** * * * **** * **** **** *
19449248 CCGAGGGTTGCGGCAGCACATGCTCACCTCGGGCATGTGTTGTGTCGCATTTTTCTTCGCTGGGG
421 CC-AAGTTTGGGGC--CA-AAACTC-CTTC-CGAAAAAATT-T-T--AAAAAATC-TCGAACCGT
* ** * * *** * * ** * * * * * ***
19449313 CACCA-TCGTCGGAGCGTCGACGAAGAACCT-GACTGACGGCATTGGTGTT-CCGACG-ATCGGG
475 AAAAAGT-TTC-AAAAATCG-TGAA-AA-ATAGA-AAAC-G-AGTCGTCTTGCC-ATGAAACTTC
** * ** ** ** * * ** * * * *
19449374 GGGCCGGGGGGGTGTGCG-CACATGATGTATGATGGGTGCTGGTACTCGGCCCTTATATTGGCCC
531 ACG-TGAAGGCTTAAGGGAC-CAT--TGTATGA---AT--T--TAC-AAGCCATAAAAATGG---
* * * ** * * * ** * * * * **
19449438 CCTATCGATCAT-CAAAAAT-TG-AGAACT--C-ACACCCTCTTAAAGAGCATTTGAGATTTTAC
581 -C-ATTG-GCATGCAGAAATATGAAGATGTGCCTAAACCCACCT-ACCACCCTAT-CGA-TCCAC
* * * * * ** ** ***** * **
19449497 AGGCCTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGCAAC-AC-TTTTTTCAAATGGTCACAA
640 -GGCTTGC-G-CA-T--CC-----CGTCTCT---CTGGC--CGGCGTAGTGCCCGCCCG-CCCGC
*** * * * * ** * ***** * * *** *
19449560 AATCTTGTATACTTCGATT-TTTTAGCTGAATGTTTTTGTGCA-TGCCA-AAAAAAATACAAGGA
688 CCGCTCGT-TTCGTCGGTTGGCTTAG--GCAT-ACGGAGTTCATTCCCAGTCTAAGAT-C--GGA
* * * * ** ** * * * *** **** * *
19449622 TCACGTCTACC-AAGTTTGGGGC--CAAAACTC--CTTC-CGAAAAAAGTTTAAAAAATCTCAAA
746 CCA-G---ACCGAGGGTTGCGGCAGCAGGA-TCGGCAGCACG-CAGAGGGGGACCCGA-C-CGAT
* * ** ** ***** * **** ** * ** *
19449681 CCCCTAAAAG-TTTCAAAAATCGTG-AAAAATAGAAAAC-GAGTCGTCTTGCCATGAAAC-TTCA
803 CCCC----GGCTTGC--GCATCCCGCCCCTCTGGCCGGCTGAG-CG-CCCG-CACG-CTCGTT-T
* * * ** *
19449742 CGTGAAGGCTTAAGGGACCATTGTATGAATTTAC-AAGCCATAAAAATGGCATTGGCA-TGT-A
857 CGTG--GG-TT----GA-C--T-TAGGCA--TACGGAG---T-----T--CATTCCCAGTCTAA
* * * ** * ** * ** * * *
19449803 GAAATATGAAGATGTGCCTAAACCCA-CCTACCACCCTATC-GATCC-ACGGCTTGC-GCATCCC
1 G-CATACG--GA-GT-TC-ATTCCCAGTCTAAGATCGGACCGGA-CCGA-GGGTTGCGGCA--GC
* * * * * * * * * *
19449864 GTCTTTCTGGTCGATGTAGTGCCAGCCCACCCGCCCGCCGG-CCCACTCATTTTGTCGGTTGGCT
56 -ACATGCT-G--G--G--CT-CC-G-GCA--TG--TGCTGGTGCC-GT-ATTTT-TC--TT--CT
** * ** * * * ** * *
19449928 -TAGGCATACGTAGTTCATTCCCAGCAGCAGGATCGGCAGCACGTAGAGGGGGCCCCGACCAATC
99 CGGGGC--AC-CA--TC--TCGGAGCATC--G-TCGG-AGAACCT-GA-CCGG---CG-GC-ATT
*** ** * ** *** * ** * * * * **
19449992 CCCG-TCTTGCACATC-TCGCCCCTCTGGCCGACTGAGCGC-C-CGCACGCT-CGTTTCGTG--G
146 GGGGTTCCGGC-GATCGGGGGGGC-C-GG-GGGGTGTGCGCACATG-ATG-TGCGATGGGTGCTG
* * ** ** * * * ** *** **
19450050 GTTGACTTAG-AC--ATACAGAG--TTC-ATTCC-CAGTCTAAGCATACG-GAGTTCATTTCCAG
205 G-T-ACTTGGCCCTTATATTG-GCCCCCTATCCCTCA-TC-AAACCT-CGAGAACTCACACCCCC
* **** *** **
19450107 TCT--A-AG-A-TCG-GACCGGACCGAGG---GCTG-CAGTAGCACATGCTAG-GCTCAAACATA
264 T-TAAAGAGCATTTGAGATTTTA-C-AGGTTTGCTGCCAGTAGC-CATTAAAGTG-TCTGA-A-A
* * * * * * ** * * * * ** *
19450161 TGCTGGTGCCGCATTTTTC--TTCGTCGGGGCACCATCGTCGAAGCATCGTCGGAGAACCTGATC
322 TG--GG-GACACTTTTTTCAAATGGTC---ACAAAATC-TTGTA-CA-CTTC-GAG---TTTTTA
* * ** * ******** ** * *
19450224 GACGGTATTTGGGTTCCGGTGATCGAGGGGGCCGGGGGGGTGTGCACACATAATC-TGTGATGGG
374 G-CTGAATTT---TT-TTGTG--C-A---TGCC-AACAAAAAT--ACA-AGGATCACGT-CT---
** ** * ** * ** ** ** * * * *
19450288 TGCTGGTACTT-GGCCCTTATATTGGCCTCCTATCCCTCACCAAACCTCGAGAACTCAC-ACCCC
420 ACCAAGT--TTGGGGCC--A-A---AACTCCT-T-CC-GAAAAAATTTTAAAAAATCTCGA-ACC
* * * * * * *
19450351 GTAAAGAGCATTTGAGATTGTACAGGTTTCCTGCTAGTAGCCATTAAAGTATCTAAAATAGGGAC
473 GTAAAAAG--TTTCA-A----A-A---AT-C-G-T-G-A---A--AAA-TA--GAAAA-CGAGTC
* ** ** * ** ** *
19450416 ACTCTTTTCA--AAAGGTCAC--AAAATCTT--GTACACTTCGAGTTTTTAGCTGAATTTTTTTG
513 -GTCTTGCCATGAAACTTCACGTGAAGGCTTAAG-GGAC--C-A--TTGTA--TGAA-----TT-
* * *** ** ** ** * * * **
19450475 TGCATGCCA-AGAAAA-AAAAAAGG-AT-CACG-TCTACCAAGTTTGGGGCCAAAAGTCCTTCCG
563 TACAAGCCATA-AAAATGGCATTGGCATGCA-GAAATATGAAG-AT-GTGCCTAAA--CCCACC-
* ** *** *** * **** * * ***** ****
19450535 AAAAAATTTTAAAAATTCC-CGAAC---CGCAAAAAGTTTCAAAAAT-TATG-AAAAATAGAAAA
621 -TACCACCCTATCGA-TCCACG-GCTTGCGCATCCCGTCTC-----TCT-GGCCGGCGTAGTGCC
** ** * ** * ** * * ** ***
19450594 CGAGTCGTCTTGCCATGAAAC--TTC-ACGTGAAGGCTTAAGGGACCAT-TGTA-TGAATTTAGA
677 CG-CCCG-CCCGCC-CG-CTCGTTTCGTCG-GTTGGCTT-A-GG--CATACGGAGTTCA-TTCCC
* ** ** * * ** * * ***
19450654 AGTCATAAAAAT-GG--C--A--TTGGCATGCAGAAATATGAATATGTGCCTAAGC-C-CA-CCT
732 AGTC-T-AAGATCGGACCAGACCGAGGGTTGCGGCAGCA-GGAT-CG-G-C--AGCACGCAGAGG
*** * ** ** * * * * *
19450709 ACCACCCTATTGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAATGCCCGCCCGCTCG
789 GGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC-TGA-G--CGCCCGCACG
* ** *
19450774 CTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
850 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** * * * * *
19450822 GGTCAGACCAGACCG-AGAGTTACGGCAG--TAGGATCGG-CAGCACATAGAGGG-TGAACCGGC
1 -G-CATA-CGGA--GTTCA-TT-C-CCAGTCTAAGATCGGACCGGAC--CGAGGGTTG---CGG-
* ** * * * * * * ***
19450882 CAATC-CCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA-CGCTCATTTCGTCG
52 C-AGCACATG-C-TGGGC-T-CCG--GC-AT-G--TGCTG-GTG-CCGTATTTTTC--TTC-TCG
* * * * ** * * * *** ** *
19450945 GTTGACTTAGGCAT-ACAGAGTTCAT--TC--CCAATCTAAGCTATGG-AGTT--CATTCCCAGT
101 G--GGC--A-CCATCTCGGAG--CATCGTCGGAGAACCTGACCGGCGGCA-TTGGGGTT-CC-GG
*** * * * * * * *** *
19451002 CTAAGATCGGACCGGAC-AGAGGTTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCA
156 C---GATCGGGGGGGCCGGGGGGTGT--G-C-GCACATGATGTGCGATGG---GTGCTGGT-AC-
**** *** * * *** * * * * ** * *
19451066 TATTTTTCTTCA-CCGGGGCACC-ATCGCGGGACCATCACC-GGAGAACCTGACCAGCGGCATTG
209 T-TGGCCCTT-ATATTGGCCCCCTATC-CCTCATCA-AACCTCGAGAA-CTCA-CA-CCCCCTTA
* ** * ******** * * * * ****
19451128 AAGTTTCGGCGATCGGGGGGCCGGTGGGTGTAC-GCACATGATGTGCGATGGGTGCTGGTACTTG
267 AAG----AGC-ATTTGAGATTTTACAGGTTTGCTGC-CA-G-T-AGCCATTAAAG-T-GT-C-T-
* * ** * * ** * * ** * ****
19451192 GCCCTTATATTGGCCCCCTATCCTTCATCAAA-CCTCA-AGAA-C-T-CACACCCCCA-TAAAGA
318 G-----AAATGGGGACACT-T--TT-TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
** * * * *
19451251 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC-ATTAAAGTGTCTGAAATGGGGA-CACTTT
374 GC---TGA-ATTTT-----TTTG-TG-CA-T-GCCAACAAAAAT-AC---AA---GGATCACGTC
** * * * **** ** * ***** **
19451314 TTTCAA--AT-GGTCACAAAA-TCTTGTACACTTCGAGTTTTTAAATGAAT-T-TTTTTGT-GCA
419 TACCAAGTTTGGGGC-CAAAACTCCT-T-C-CGAAAAAATTTTAAA-AAATCTCGAACCGTAAAA
* *** * ** * *** * **
19451372 TGCCAACAAAAAT-G-CAAGGAT-CATGTCTA-T-GT-TTGGGGCCA--AAACTCCTTC-CGAAA
479 AG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT---GCCATGAAA---CTTCACG-TG
*** *** * ** * ** * ** *
19451428 AAATTTTAAAAAATCCCGAACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCATC
536 AAGGCTTAAGGGA--CC--ATTGTATGAA-TTT-ACAAGCCAT-AAAAAT-GGCATTG-G-CA--
* * * ** ** *** * * **
19451493 TTGCCACGAAACTTCATG-TGAAG-GCTTAAGGGA-CCATTGTATGAATTTAGAAGCCATAAAAA
589 -TG-CA-GAAA--T-ATGAAGATGTGCCTAA---ACCCA-CCTACCACCCT---ATCGAT--CCA
* * * *** * ** * ** * ** *
19451555 TGGCATTG-GCATGCAG-AAATAT-G-AAG-AT-GTGCCTAAACCCACCTACCAC-C-C-TATCG
639 CGGC-TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCC--CGCCCGCCCGCC-CGCTCGTTTCG
*** * * ** ** * * ** * * **
19451611 ATC-CACGGCTT-GCGCATCCCGTCTCTC-TGGCC-GACGTAGTGCCCGCCCG-CCCGCCCGCTC
700 -TCGGTTGGCTTAG-GCATACGGAGT-TCATTCCCAGTC-TA-AGATCG---GACCAGACCG-AG
* ** ** * ***** * * **
19451671 GTTTCGTCGGTTGGCTTAGGCATACGG-AGTTCATTTCTTGTCTAAGATCAGACCGGA-CCGAGG
756 GGTT-G-CGG-CAGC--AGG-AT-CGGCAG--CA-CGC-AGAGGGGGACCCGACC-GATCCCCGG
* ** ** ** * ** * * ** *
19451734 GTTGCGACAGT-AGGATCGGC-AGCACGTGGAGGAG-GACCCG-A--C-CGATCCCCGGCTTG--
809 CTTGCG-CA-TCCCGCCCCTCTGGC-C--GGCTGAGCG-CCCGCACGCTCGTTTCGTGGGTTGAC
* *** * ** * **
19451790 -T--GCATCCCGCCCCTCCGGTCGGCTGAGGGT-TGTG
868 TTAGGCAT-ACG-GAGTTCATTC--C-CA--GTCT-AA
* * * *** * *
19451824 GCA-AC-AAGTTCAGT---AGTAC-ATAGAGTTGGACCGAGCCAATCCCCTGCTTGC-GCATC-C
1 GCATACGGAGTTCATTCCCAGT-CTA-AGA-TCGGACCG-G---A-CCGAGGGTTGCGGCAGCAC
* **** ** * * * *** * * * *
19451881 -CGCCCCTCTGCCCACA-GAGC--G-CCCGCACACTTGTT-TCGTGGGTTGACTTAGGCATACGG
58 ATGCTGGGCT-CCGGCATGTGCTGGTGCCGTATTTTTCTTCTCG-GGG--CAC-CA-TC-T-CGG
* * * * * *** *** ** **
19451940 AGTTCATTCCCAGTC-TA-AGCAT-A-CGGAGTTCATTCCCAG-T-CTAAGATCGGACTGGATCG
115 AG--CA-T--C-GTCGGAGAACCTGACCGGCG-GCATT-GGGGTTCCGGCGATCGG-GGGGGCCG
* * * * * * * * *
19451999 AGGGTTGCAGCAGCACATGCTG-G-GCTCGG-GCAT-GTGC-TGATGCCGCATTTTTCTTCGTCG
171 GGGGGTG-TGC-GCACATGATGTGCGATGGGTGC-TGGTACTTG--GCC-C--TTAT-AT--T-G
* * * * * * * ** * ** *
19452059 AGGCACC-AT-CGTCGGAGC-ATCACTGGAGAACCTGAC-CGGCGGCTT--TG-GGGTTCCGACG
224 -GCCCCCTATCCCTC--ATCAAAC-CTCGAGAA-CTCACAC--CCCCTTAAAGAGCATT-TGA-G
*** * * * ** *** *
19452117 ATCGGGGGGGACGGGGGGGGTGTGC-GCACATGATGTGTGATTGGTGCTGGTACTTTGCCCTTAT
280 AT-----TTTAC-----AGGTTTGCTGC-CA-G-T-AGCCATTAAAG-T-GT-C--TG-----AA
* * * ** *** ** * * *
19452181 AT-TGGCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCTCTTAAAGAGCATTTGAGATTTT
321 ATGGGGACACT-T---TTTTCAAA---TG-G---TCACAAAATCTTGTACA-C-TTCGAGTTTTT
** ** * ** * * * * ** *
19452245 A-C--AGGTTTGCTGCTAGTA-GCC-ATTAAAGTGTCTGAAATGGGGA-CACTTTTTTCAA--AT
373 AGCTGAATTTTTTTG-T-GCATGCCAACAAAAAT-AC---AA---GGATCACGTCTACCAAGTTT
* * **** ** ** * * ** * * **
19452302 -GGTCACAAAA-TCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAAT
429 GGGGC-CAAAACTCCT-T-C-CGAAAAAATTTTA---AAA-AATCTCGAAC-CG-TAA-AAAGTT
* ** * ** * * ** *
19452365 ACAAGGATCATGTCTACAAGTTTGGGGCCAAAA-AAG--GAT-TT-CCGAAAAAATTTTCAAAAA
483 TCAAAAATC--GT-GA-AA-AAT--AG--AAAACGAGTCG-TCTTGCC-ATGAAA-CTTC----A
* * ** *** * * * * *
19452425 TC-TCGAA-CCGTAA-AAAGTTTTG-A-AAATCGTGA-AA--AATAGAAAATGAGTCGTCTTGCC
532 -CGT-GAAGGCTTAAGGGACCATTGTATGAAT--TTACAAGCCATA-AAAATG-G-C--ATTGGC
* * * ** *** ** * * *** *
19452482 ATG-A-AACTTAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATAGCAT
588 ATGCAGAA-AT-A--TGAA-G---ATGTG-CC--TAAACCCACCTACCA-CCCTATCGAT-CCA-
* * *** *** * ** ** * *** * **
19452545 TGGCACATAGAAATATGAAGATGTGC-CTAAACCAACCTACCACCCTATAGATCCAAGGCTTGCG
639 CGG--C-TTG-CGCATCCCG-TCT-CTCT-GGCCGGCGTAGTGCCC----G--CC--CGCCCGC-
** * * ** * * * * ** * * * *
19452609 CATCCCGTCTC-TCTGGCCGACGTAGTGCCTGCCCGCCCGTTCGTTTCGTCGATTGGCTTAGGCA
688 CCGCTCGTTTCGTC-GGTTGGCTTAG-GCAT--ACG-GAGTTC-ATTC--CCA--GTC-TAAG-A
** * *
19452673 TACGGAGTTCATTCCAGTCTAAGATCGAATCGGACTGAGGGTTATGGCAGCAAGATCGGCAACAC
741 T-C-G-G---A---C---C----A--G-A-C---C-GAGGGTTGCGGCAGCAGGATCGGCAGCAC
* * * * *
19452738 ACAGAGGGGGACCTGACCGATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGT
782 GCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGC
* * ** *
19452803 ATGCTTGTTTCGTGGGTTGGTTTAGGCATACAGAGTTCATTCCCAGTCTAA
847 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * *
19452854 GCATACAAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * **
19452919 CT-CGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACTATCGTCGGAGCATCGCCGTTG
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAG
* *
19452983 AACCTGA-CGGCGGCATTGGGGTTCCGGTGAGC-GGGGGGCCGGGGGAGTGTGCGCACATGATGT
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGG-GTGTGCGCACATGATGT
* * *
19453046 GCGATGGGTGCCGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCG
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * *
19453111 CACCCCCTTAAAGTGCATTTGAGATTTTACATGTTTGCTGCCAGTAGCCGTTAAAGTGCCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
19453176 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * * * * * *
19453241 GTCCATCCCAAAAAAAAAGACAAGCATCATGTATACCAAGTTTGGGGCCAAAACTGCTTCCGAAG
387 GTGCATGCC-AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* **
19453306 TAATTTTAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTAAT
451 AAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
19453370 CTTGCCATGAAACTTCACGTAAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
19453435 GCATTGACA-GACAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCT
580 GCATTGGCATG-CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
19453499 TGTGCATCCCGTCTCTCTGG-CGGACGTA--G--CTCCCGCCCGCCCGCTCATTTCGTCGGTTGG
644 TGCGCATCCCGTCTCTCTGGCCGG-CGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* * * * *
19453559 CTTAGTCATACGGAGTTCATTCCCAGTCTAAGAT-TGACCGGACTGAGGGTTACGGCAGCAGGAT
708 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGAT
* ** * *
19453623 CGGCAGCACGCAGCGGGGGACTTGACCGATCCCCGGCTTGCGCATTCCGCCCCTCTAGCCGGCTG
773 CGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * *
19453688 AGCACCCGCACGTTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
19453748 GCATATGCAGTTCATTCTCAGTCTAAGATCAGACTGGATCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** * * **
19453813 CTCAGGCATGTGCTGCTGCCACATTTTTCTT-TGCCGGGGCACCATCGCCGAAGCATCACCGGAG
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTCT--CGGGGCACCATC-TCGGAGCATCGTCGGAG
* * * * * *
19453877 AACCTGATCGACGGCATTGGGGTTCCGACGATC-GGGGGGCTGGGGGGTGTGTGCCCATGATGTG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* *
19453941 CGATTGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
19454006 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
19454071 AGGGACAC-TTTTTCATATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * *
19454135 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGCTTGGGACCAAAACTCCTTCAGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * *
19454200 A-TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTCAAAAATAGAAAACGAGTCGTCTT
453 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
19454264 GCCATGAAACTTCACGTGAAGTCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * * *
19454329 TTGCCAAGAAGAAATATGAAGATGTACCTAAACCCACCTACCACCTTATCGATCCACGGCTTACG
583 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
19454394 CATCCCGTCTCTCTGTCCGGCGTAGTGCCCGCCCACCCGCTCGCTCGTTTCGTCGGTTGGCTTAG
648 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * *
19454459 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCGGCAGAAGGATTGGCA
713 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCA
*
19454524 GCACACAGA-GGGG----GACC--T----GG--T-CG-AT-------C-C---CC-G--GAGCGC
778 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* * * *
19454560 CCGCACGCTCGTTTCGTGGGTTGGCTTCGGCATACGGAGTTTATTCCTAGTCTAA
843 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** *
19454615 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCAAATGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * *
19454680 CT-CGAGCATATGCTGGTGCCACATTTTTCTTCGTCGGGGTACCATCGTCGGAGCATTGTCGGAG
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAG
* * * * * *
19454744 AACCTGATCGACGGCATTAGGGTTCCGACGATCGGGGGGGCCGGGAAGGGTGTGCGCATAAGATG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGG--GGGTGTGCGCACATGATG
19454809 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
19454874 ACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
19454939 ATGGGGAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* ** *
19455004 TGTGCATGCCAA-AAAATGTACAAGGATCACGTCTAATATGTTTGGGGCCAAAACT-CTTGCCG-
386 TGTGCATGCCAACAAAA-ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CCGA
* * * * *
19455066 AAAAATTTTCAAAAAGTCCCCAACCGCAAAAAGTTT-AGAAAATCATGAAAAATAGAAAACGAGT
449 AAAAATTTT-AAAAAATCTCGAACCGTAAAAAGTTTCA-AAAATCGTGAAAAATAGAAAACGAGT
* * *
19455130 CATCTTGCCATGAAACTTCACGTGAAGGCTCAACGGACCATTGTATGAATTTACAAGCCATAAAA
512 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
*
19455195 ATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
577 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * *
19455260 CTTGTGCATCCTGTCTCTCTAGCCGGTGCAGTGCCCGCCCGCCCGCCGGCCCGCTCGTTTCGTCG
642 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG--C-CC-GCCCGCTCGTTTCGTCG
* * * *
19455325 GTCGGCTTAGGCATACGGAGTTCATCCCCAGTCTAAGATCAGACCGGACCGAGGGTTGC-GCTAG
703 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGC-AG
* * * * * * *
19455389 CAAGATCGGCAGCACGCAGAGGAGGACCCGGCTGATCCCCGACTTGCGCAT-CCGCCTCTCTGGT
767 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* ** * *
19455453 CGACTGAGCGCCCATAAGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTA
832 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
19455518 A
897 A
* * * * * * * *
19455519 GCATGCGGAGTTCATTCTCATTCTAAGATCGGATCAGACCGTGGGTTGCGGCAACACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
19455584 CTCGGGAATATGGTGGTGCCGCATTTCTCTTCGTCGGGG---CA---C----CATCGTCGGAGAA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* * *
19455639 CCTGACCGACGGCATTGGGGTTCCGGTGATCGGAGGGGCCGGGGGGGTGTGCGCACATGATGTGC
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGC
** *
19455704 GATGGGTGCTGGTACTTGGCCCTTATATTCACCCCCTATCCCTCATCAAACCTCAAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
19455769 CCCCCTTAAAGATCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19455834 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAAGTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * ** * * * *
19455899 GCATGCCAAAAAAAATACAAGGATCACGTCCACCAAGTTTGGGGTGAAAACGCCTTCTGAAATAT
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * * *
19455964 TTTTAAAAAATCCCGAACCATAAAACGTTTAAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTG
454 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
19456029 CCATGAAACTTCACGTGAAGGCCTAAGGGACCATTGTATGAATTTATAAGCCATAAAAATGGCAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
*** *
19456094 TGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* ** *
19456159 ATCCCGTCTCTCTAGCCGATGTAGTGCCCGCCTGCCCGCCCGCCCCCTCGTTTCGTCGGTTGGCT
649 ATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * * * *
19456224 TAGGCATACGGAGTTCATTCCCAGTCTCAGATC-GACCAGACTGAGGGTTACAGCAGCAAGATCG
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCG
* ** * *
19456288 GTAGCACATAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCACCCCTCTGGCCGGCTGAG
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * ** *
19456353 CGCCTGCACGCTCGTTTCGTGAGTTGACTTAGGCATACAAAGTTCGTTCCCAGTCTAA
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19456411 GCATATGGAGTTCATTCACAGTCTAAGATCGGACCAGACCGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * ** *
19456476 CT-CGAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCTTAGCATCGTCGTAG
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAG
* * *
19456540 AACCTGACCGTCGGCATTAGGGTTCCGACGATCGGGGGGGCCGAGGGGGTGTGCGCACATGATGT
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGTGTGCGCACATGATGT
* *
19456605 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCTAACCTCGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
19456670 CA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19456734 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* **
19456799 GTGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGGTAAAA-TCCTTCCGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** *
19456863 AATTTCAAAAAATC-CAGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATATAAAA-GAAGTCGT
452 AATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG-AGTCGT
* *
19456926 CTTGCCATGAAACTTCACGTGAAGTCTTAAGGCACCATTGTATGAATTTACAAGCCATAAAAATG
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
19456991 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTT
580 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * * * *
19457056 GCGCATCCCGTCTCTTTTGTCGACGTAGTGCCCG---TCCAG-TCGCTCGTTTCATCGGTTGGCT
645 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* ** ** * * * *
19457117 TAGGCTTGTGGAGTTCATTCCCAGTCTAAGATCAAACCGGATCGAGGGTTGTGGCAGCTGGATCG
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCG
* * * * * *
19457182 GCAACACACAGAAGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCTGGCTGAG
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * * * *
19457247 CCCCCGCACGTTCGTTTCGTGGGTTGACCTAGGCATACGGAGTTCATTGCTAGTCCAA
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19457305 GCGTACGGAGTTCATTCTCAGTCTAAGATTGGATCGGATCGAGGGTTGTC-GCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG-CGGCAGCACATGCTGG
* * * * * * **
19457369 GCTCGGGCGTTTGCTGATGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAG
65 GCTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAG
* * * *
19457434 AACCTGATCGGCGGCATTGGGGTTCCGACGATCGAGGGGGCCGAGGGGGTGTGCACACATGATGT
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGTGTGCGCACATGATGT
*
19457499 GCGATGGGTGCTGGTACTTGGCCGTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
19457564 CACCCCCATAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
19457629 TGGGGATACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
19457694 GAGCATGCCAAAAAAAATACAAGGATCACATCTACCAGGTTTGGGGCCAAAACTCCTTCCAAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** * * *
19457759 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGATTAGTCT
452 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
** *
19457824 TGCCATGAAACTTCACAAGAAGGCTTAAGGGACCATTGTATGAACTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * *
19457889 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGTTCCACGACTTGC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
19457954 GCATCCCGTCTCTCTGGCCGGCATAGT----GCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTTA
647 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * ** *
19458015 GGCATATGGAGTTCATTCCCAGTCTAAGATCAGACTGGACCAAGGGTT-----A-C--GA----C
712 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGC
*
19458068 AGCACGCAGAGGGGGA--C--CCGA-------C---CG-ATCCCGCCCCTCTGGCCGGCTGAGTG
777 AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * *
19458118 CCCGCACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTGTAA
842 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
**
19458174 G-AT-C-G-G---A---CC-G----A-AT----------CGAGGGTTGCGATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
19458213 CT-GGAGCATGTGCTGGTGGCGCATTTTTCTTTTCGGGGCACCATCACCGGAGCATCATCGGAGA
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTCTCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* *
19458277 ACCTGACCGGCGGCATT-GGGTTCCGACGATCGGGGGGGTCGGGGGGGGTGTGCGCACATGATGT
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGG-C-CGGGGGGTGTGCGCACATGATGT
* ** * *
19458341 GCGATGGGTACCAGTACGTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTTGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
19458405 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19458470 TGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19458535 -TGCATGCCAA-AAAAATACAAGGATCACATCAACCAAGTTTAGGGCCAAAAATCCTTCC-AGAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA-AA
* **
19458597 AAATTTTAAAAAAAC-CTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGT
451 AAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
19458661 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAGGCCATAAAAATG
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *** * * * *
19458726 GCACTGGCACATAGAAATATAAAGATGTGCCTAAACTCACCTACCACCCTATCGATCTACAGCTT
580 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
19458791 GCGTATCCCGTCTTTCTGGCCGACGTAGTGCCCGCCCGCCCTCCCGCTCGTTTCGTTGGTTGGCT
645 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * * * * * *
19458856 TAGGCATACAGAGTTCATTCCCAGTCGAAGATCGGACCTGACCAAGGGTTGCGGTAGTAGGATTG
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCG
* * * * * * *
19458921 GCAACATGCA-AAGGGGACCCGACCGATCCTCGGCTTGTGCATCCTGCCCCTCTGGCCGGTTGAG
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * * *
19458985 TGCCCGTAGGCTCGTTTCGTGGGATGACTTAGGCATACGGAGTTCAATCCCAGTCTAA
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * ** *
19459043 GCAAACAGAGTTCATTCCCAGTCTAA-AGTCGGACCAGACTGAGGTTTAAGGCAGAACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGA-TCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
** *** * * *
19459107 GCTTGGGCATGTGCTGGTGCTACATTTTTCTT-TGCTGGGGCACCATCGCTGGAGCATCGCCAGA
65 GCTCCGGCATGTGCTGGTGCCGTATTTTTCTTCT-C-GGGGCACCATCTC-GGAGCATCGTCGGA
* * * * * * *
19459171 GACCCTGACCGGTGGCATTGGGGTTTCGACGATCGAGGGGGTCGGGGGGGTGTGCACACATGATG
127 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGGGCCGGGGGGTGTGCGCACATGATG
*
19459236 TGCGATGGGTGCTGGTACTTGG-CCTTATCTTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
19459300 ACACCCCCTTAAAAAGCATCTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
19459365 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
19459430 TGTGCATGCCAACAAAAATACAAGGATTACATCTACCAAGTTTAGGGCCAAAACTCTTTCCGAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * * *
19459495 AAATTTTAAAAAATCCCGAGCCGCAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAATCGTC
451 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
19459560 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
19459625 CATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACTGCTTG
581 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * *
19459690 CGCATCCCGTCTCTCTAGCCAGCGTAGTGCCCGCCCGTCCGCCCGCCTGCTCGTTTCATCGGTTG
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG--C--CCGCCCGCCCGCTCGTTTCGTCGGTTG
* * * *
19459755 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-GAGATCGGACCGAGGGTTGTGGCAGCAAG
707 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCG-GACCAGACCGAGGGTTGCGGCAGCAGG
* ** * * * * *
19459819 ATCGGTATTACGCATAAGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTTTGGCCTGC
771 ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * * * * *
19459884 TGAACGCCTGTACGCTCGTTTCGTGGTTTGTCTTAGGCATACGAAGTTCATTCCCAGCCTAA
836 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * **
19459946 GCATATGGAGTTCATTCCCAGTCCAAGATCGGATCGGACCGAGGGTTGCAACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19460011 CTCGGGCATGTGCTGATGCCGTATTTTTCTTCACCGGGGCACCATCGTCAGAGTATCGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * * *
19460076 ACCTGACCGGCGACATTGGGGTTTCC-GTGATCGGGGGGGCCGGGGGGTGTACGAACATGATATG
129 ACCTGACCGGCGGCATTGGGG-TTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* * * *
19460140 TGATGAGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCTAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
** ** *
19460205 ACCCCCTTAAAGAGTGTTTTTCGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAA
258 ACCCCCTTAAAGAG-CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * *
19460270 TGGGTACACTTTTTTGAAATGGTCACAAAATGTTGTACACTTCGAGTTTTTAGCTGAATTTCTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* *
19460335 GTGCATGCCAGCAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTCCGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * ** * * * *
19460400 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATTGTGACAAATAGAAAAGGAGTTGTCT
452 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19460465 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCCTTGTGTGAATTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *** * *
19460530 ATTTGCACATAGAAATATGAAGATGTGCCTAAACCAACCTA-CACCCTATCGATCCACGGCTTAC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * ** *
19460594 GCATCACATCTCTCTGGCCGACGTAAAGCCCGCCCGCCCCCTCGCCCGCTCGTTTCATCGGTTGG
647 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG---CC-CGCCCGCTCGTTTCGTCGGTTGG
* * *
19460659 CTTAGGCATAAGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGAT
708 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * * * * ** * *
19460724 CGACAGCACGCAGAGGGGG-CCCCAGCTGATCTCCGTCTTGCACATCCCGTGCCTCTTGTCGGCT
773 CGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* *
19460788 GAGCGCCCGCACGCTCATTTC--------A--T-GG--T--TGA---CA-T---AG-----
837 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
19460822 GCATACGGAGTTCATTCACAGTCTAAGATTGGACCGGACCGAGGGTTACGGCTGCACATGCT-GG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19460886 -T--GCCA----CAT--T----T-TTCTTC--ATCAGGGCACCATCACCGGAGCATCG-CTGGAG
66 CTCCGGCATGTGC-TGGTGCCGTATTTTTCTTCTCGGGGCACCATC-TCGGAGCATCGTC-GGAG
* * * * * * * *
19460934 AACTTGATCGGCAGTATTTGGGTTTCGGCGATCGAGGGGGCCGGGGGGTGTGCGCACATAATGTG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTG
*
19460999 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
19461064 ACCCCCTTAAAGAGCATTAGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGCCTTAAGT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
19461129 GGGGACACTTTTTTCAAATGGTCACAAAATCATGTACACTTTGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
19461194 TGCATGCCAA-AAAAATATAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTGCGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * **
19461258 TTTTTTAAAAATC-CTGAACAGCAAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGTC
453 ATTTTAAAAAATCTC-GAACCG-TAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * **
19461322 TTGCCAGGAAACTTCACGTGAAGGCTTAAGGGACCACTGTATGAATTTACAAGTGATAAAAATGG
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
19461387 CACTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCATG
581 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
19461452 CG-AGTCCCATCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCCCGCTCG-TTCGTCGATT
646 CGCA-TCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG--C--CCGCCCGCTCGTTTCGTCGGTT
* * ** * * * **
19461515 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGGCTGGATCGAGGGTTGTGGCAGAAAA
706 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGG
* *** * * * *
19461580 ATCTGCAGCATTTAGATGGGGACTCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTTTGGCCGGC
771 ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * * * * * * *
19461645 TGAGCACGCACACGTTCGTTCCATGAGTTGACTCAGGCATACGGAGTTCGTTCCCAGTCTAA
836 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * **
19461707 GCATACAGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGTAGCACATGCTAAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * *
19461772 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCTGAGGTACCATCATCGG-GTCAT-GCCGAAG
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTCTC-GGGGCACCATC-TCGGAG-CATCGTCGGAG
* * * *
19461835 AACCTGATCGGCGGCA-TGGGGTTCCGGTGATC-GGGGGGCCGGGGGATGTGCACACATGATGTG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* *
19461898 CGATGGGTGCTCGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
19461963 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-AGAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA-AA
*
19462027 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * * *
19462092 TTGCATGCCAAGAAAAATACAAGGATCACATCTTCCAAGTTTTGGGCCAAAACTCCATCCGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
19462157 AATTTTAAAAAATCTCAAACCGTAAAAAGTTTCCAAAATCGTGAAAAATAAAAAACGAGTCGTAT
452 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
19462222 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
***
19462287 ATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
19462352 GCATCCCATCTCTATGGTCGGCGTAGTGCCTGCCCGCCCGCCCGCTCGCCTGCTCGTTTCGTCGG
647 GCATCCCGTCTCTCTGGCCGGCGTA--G--TGCCCGCCCGCCCG--C-CC-GCTCGTTTCGTCGG
* * * * *
19462417 TTGGCTTAGGCATACGGAGTTCATAT-CCAGTCTAAGATCGGACCGGACTGAGGATTACAGCAGC
704 TTGGCTTAGGCATACGGAGTTCAT-TCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGC
* * * * ** ** * **** * *
19462481 A-CAT-GGCGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCACCGG--GGCACCATCGCCGG
768 AGGATCGGC-AGCAC--GCA-GAGGGGGACCCG-ACCGATC--C-CCGGCTTGC-GCATC-CC--
** * * * * **** * ** *
19462542 AGAACCTGACCGG-CGGCATTG-GGGTTCCG-ACGATCGGGGGGGCCGGGGGGA--T-GTGCACA
821 -GCCCCT--CTGGCCGGC--TGAGCG-CCCGCACGCTC-GTTTCG-TGGGTTGACTTAG-GCATA
* * * ** **
19462601 CATGATGTGCGATGGGTGCTGGTACTTG
877 C-GGA-GTTC-AT---TCCCAGT-CTAA
* **** * * ** ** *** ***
19462629 GCCCTTATATTGGCCCCCTATCCCTCA-TCAAACCTCGAGAACACACACC--CCCTTAAAG-AGC
1 G--C--ATA-CGGAGTTC-ATTCC-CAGTCTAAGATCG-G-AC-CGGACCGAGGGTTGCGGCAGC
** * *** * ** * ** * ** * ** * ** *
19462690 ATTTG-AGATTTAACAGGTTTGCTGCCAGAAGCCATTAAAGTGTCTGAAAT-GTGGACACTTTTT
56 ACATGCTGGGCT--CCGGCATG-TG-CTGGTGCC-GT-ATTTTTCT--TCTCG-GGGCAC-CATC
* * ** * * ** ** ** * ******** * * *** **
19462753 TC--A-AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
111 TCGGAGCATCGTCGGAGAA-CCTG-AC-CGGCG-GCATTGGGGTTCCGGCGATCGGGGGGGCCGG
****** * * * * * * **** * *** *
19462815 AAAAAATACAAGGATCACG-TCTACCAAGTTTGGG-GCCAAAACTCCT-TCCGAAAAAATTTGAA
172 GGGGTGTGC--GCA-CATGATGT-GC--G-ATGGGTGCTGGTACT--TGGCC-CTTATA-TTG--
*** ** * * ** * * * ******* * *
19462877 AAAATCCC-AAACCGCA-AAAAGTTTTGAAAATCGTGA-AAAATAGAAAACAAGTCGTCTTGCCA
224 --GCCCCCTATCCCTCATCAAA-CCTCGAGAA-C-TCACACCCCCTTAAA-GAG-CAT-TTG--A
* * * * * * * *
19462939 TGAAACTTCACGTGAAGGCTTAAG-GGACCATTGTATG-AATTTACAA--GCCATAAAAACGGCA
279 -G--ATTTTAC----AGG-TT-TGCTG-CCA--GTA-GCCA-TTA-AAGTGTC-T-GAAATGG--
* * * * * * * *****
19463000 TTGG-CA-TGTATAAATATGAAGAT-GTCCCTAAACTCACCTAGCACCCTATCGA-TCCACGGCT
325 --GGACACT-T-T---TTTCAA-ATGGTCAC-AAA---ATCTTGTACACT-TCGAGTTTTTAGC-
* ** * * ** * * ** ** * *** *
19463061 TGCGCATCCCTTTTCT-C-TGGCCAGC-GTAGTGC-CCGCCCAC-TCGTTTCGTCGGTTGGCTTA
376 T--GAAT-TTTTTTGTGCAT-GCCAACAAAAATACAAGGATCACGTC--TACCAAGTTTGG----
** * ** * *** ** * ** *** * *
19463121 GG-CATATGGAGTTCATTCCCAGCCTAAGATGGGACCAGA-CT-G-AGGGT-TGTAGTAGT--AG
431 GGCCA-A---AACTCCTT-CC-G-AAAAAATTTTAAAAAATCTCGAACCGTAAAAAGT-TTCAAA
* *** * ** * **** ** * **
19463179 GATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTC-TGGCCG
488 AATC-GT-G-A-A-A-AATAGAAAACGA--G-T---CGTCTTGC-CATGAAACTTCACGT-GAAG
* ** * * * * * *** ** **
19463243 G-TTGAGCGCCCGCATGCTTGTTTCATTGGTTGACTTAGGCATACGGA-GTTTATTCCCA-GTC-
539 GCTTAAG-GGAC-CA---TTGTATGAAT--TT-AC-AAGCCATAAAAATG-GCATTGGCATG-CA
* ** * * ** * ** * ** * * * *
19463304 TAAGCATG-CGA-GT-TC-ATTCCCAGTCTAAGATCGGATCGGA-CCGA-GGGTTACGGCAGCAC
593 GAAATATGAAGATGTGCCTAAACCCA-CCTACCACCCTATC-GATCC-ACGGCTTGC-GCATCCC
* * * * * * * ** ** * *
19463363 AT-GCT-AGGCTCGAGCAT-GTG-CTG---G--TGTCACATTTTTCTTCATCGG--GGC--A-AC
654 GTCTCTCTGGC-CG-GCGTAGTGCCCGCCCGCCCG-CCCGCTCGT-TTCGTCGGTTGGCTTAGGC
* * * ** * * * * *
19463414 ATCCACGGAGAACCTAACTGGCAG-CATTAG---GGTTCCTG--CGATCGGG--GGGGCCAG-GG
715 AT--ACGGAG---TTCATTCCCAGTC-TAAGATCGG-ACCAGACCGA--GGGTTGCGG-CAGCAG
* * * * * ** * * *** ** **
19463470 GGT-GTGC-GCA--CATG-GTGTG-CGC-ACAGATTTTACAGGTTTGCTGCCA-GAAGCCATTAA
770 GATCG-GCAGCACGCA-GAGGGGGACCCGACCGA--TCCCCGGCTTGC-G-CATCCCGCCCCTCT
* * * * ** * * * ** * ** ** *
19463527 AG-TGTCTTAAATG--GGGACACTTTTTTCAAAT-GGTCACAAAATCTTATACACTTC-GAGTT-
829 GGCCGGC-TGAGCGCCCGCACGCTCGTTTC--GTGGGT----TGA-CTTAGGCA-TACGGAGTTC
* ** * *
19463586 TTTAGCTGAATTTTTTATGCA
885 ATT--C-CCA--GTCTA---A
* *** * * ** * * * * ** * ** * ** *
19463607 TGCCAAAAAAAATACAAGCATCACGTCTACCAAATTTGGGGCCAAAAC-A-CCTT-CCG-AAAAA
1 -G-CATACGGAGTTCATTC-CCA-GTCTA--AGA--TCGGACCGGACCGAGGGTTGCGGCAGCAC
** **** *** * *** * * *** ****** * *** *
19463668 ATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATTGTGAAAAAT-AGAAAACAAGTCGTCT
58 ATGCT--GGGCTCCGGCA-TGT--GCTGGTGC-CGTATT-TTTCTTCTCGGGGCACCA-TC-TC-
* * * * * * * * * * ** ** * ******
19463732 TGCCATGAAACTTCACGTGAAGGCTTA-AGG-GACCATTGTATGAATTTACAAGCCATAAAAATG
113 -G-GA-GCATCGTC-GGAGAA-CCTGACCGGCG-GCATTG---G-GGTT-CCGGCGATCGGGGGG
*** ** ** * **** *** * *
19463795 GCATTGGCATGTAG-AAATATGAAGATGTGCCGA--AACCCACCTAC-T-ACCCTATCGATCCAC
167 GCCGGGGGGTGT-GCGCACAT---GATGTG-CGATGGGTGCTGGTACTTGGCCCT-T--AT--AT
* * * *** * * ** * * * **
19463855 T-GCTTGCGC-ATCCCGTCTCTCTGGCCGGCATAGTGCCCGC-CCGCCCGTT--CGTTTCATCGG
222 TGGC--CCCCTATCCC-TC-ATCAAACC-TC-GAGAACTCACACC-CCC-TTAAAG-AGCAT---
* * * *** * * * * ***
19463915 TTG-GCTTAGGCATACGAAGTTCATTCCCAGT---C--T-AAGATCCGACTGCACTGAGGGTTGC
275 TTGAGATT----TTAC-AGGTTTGCTGCCAGTAGCCATTAAAG-T--GTCTGAAATG-GGGACAC
***** * **** * *** * * *****
19463973 -GGCAACAAGATCGGCATCACACAGAGGGGGT-C-CGGTCGA-TCCCTGGCTTGCGCATCCCGCC
331 TTTTTTCAA-AT-GG--TCACA-AAATCTTGTACAC-TTCGAGTTTTTAGC-T--GAAT-TTTTT
** * ** ** ** * * * * *** ** **
19464034 CCT-C-TGGCCAGC-TGAACGCCCGCACGCTCGT-TTCGTGGGTTGACTTAGG-CATACGGAGTT
386 TGTGCAT-GCCAACAAAAATACAAGGA-TCACGTCTAC-CAAGTT---TGGGGCCA-A---AACT
* *** * * *** **
19464094 CATTCCCAGTCTAAGCATACAGAGTTCATT-CCTAATCT--AAGCATACGGAG-TTCATTCCCAA
441 CCTT-CC-G---AA--A-A-A-A-TT--TTAAAAAATCTCGAACCGTAAAAAGTTTCA---AAAA
* * * * * ** * ** *
19464155 TC-T--AAGATCAGACTAGACCGAG-GGT-TACGGCACCACATGCTTGGC-TCG--GGCATT-TG
490 TCGTGAAAAAT-AGA--A-AACGAGTCGTCT-TGCCATGA-A-ACTTCACGT-GAAGGC-TTAAG
* * * *** * * * *** **
19464211 CTGGTGCCGTATTTTTCTTCGACAGGGCACCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTT
546 --GG-ACC--A-TTGT-AT-GA-A-TTTA-CA-AG-C-CATAA----A--AATGGCATT-GGCAT
* ** ** ** * * * * * **** * * * * *
19464276 TCAGCGATCGGGGGGGCTGGGGCGGCTATACGCACATGA-TGTGCGATTGGTGC-TGGTACTTGG
590 GCAGAAAT--ATGAAGAT-GTGC--CTAAACCCACCT-ACCACCCTATCGATCCACGG--CTT-G
* *** * ** ** * ** ** * * * ** *
19464339 CCCTTATATTGT-TCCCCTATCCCTCATCA-AACCTCGAGAACTCACACCC-C-C-TTAAAGAGC
646 CGC--ATCCCGTCT-CTCTGGCCGGCGT-AGTGCC-C--GCCCGCCCGCCCGCTCGTT-TCG-TC
** * ** * * * ** * ***
19464399 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT-AAATTGTCTGAA-ATGGGGACACTTTTT
702 GGTTG-G--CTT--AGGCATAC-G-GAGT--TCATTCCCA--GTCT-AAGAT-CGGAC-C--AGA
* ** * ** * * * **** * * *** ****
19464462 TC-A--AATG-GTCA-CAAAATCTTGTA-CACTTC-GAGTTTTTAGCTGA-ATTTTTTTGTGCAT
751 CCGAGGGTTGCGGCAGCAGGATC-GGCAGCAC-GCAGAG-GGGGACCCGACCGATCCCCG-GC-T
** * * * ** ** * * ** * * ***
19464519 GTGAC-CAAAAATACAAGGATCACGTCTACGAAGTTTG-G-GGCC-AAAACTCCTTCCAAAAAAA
811 -TG-CGC----AT-C-CCG--CCCCTCT-GGCCGGCTGAGCGCCCGCACGCTCGTTTC----GTG
** * * ** *** *** *
19464580 TTTTAAAAAATCTCAAACCA-AAAAAGTT--TTGAAAATCATGAA
861 GGTT----GA-CT-TAGGCATACGGAGTTCATTCCCAGTC-T-AA
** ** * * **
19464622 AAATA-GAAAACGAG-TCATCTTGCCC--TGAAAGTTCACGTGA-AGG-CTTAAGGGACCATTGT
1 GCATACG-----GAGTTCA--TT-CCCAGTCTAAGAT--CG-GACCGGAC-CGAGGG-----T-T
** * * ** ** * ** *
19464681 AAGAATTTACAGGCCATAAAAATGGCATTGGCACTTAGAAATATGAAGATGTGCCTAAAGCCACT
48 --G------C-GG-CA-GCACAT-GC--TGG-GCTCCGGCATGTGCTG--GTGCC----G-TA-T
** * * *** * * * * *** * * ** *
19464746 TACCATCCTATCGATCCACGA-CTTGCA-CATC--CCG-TCTCTCTGGCCGGC-GCAGTGCCCGC
90 T--TTTCTTCTCGGGGCACCATCTCGGAGCATCGTCGGAGAAC-CTGACCGGCGGCATTG-GGGT
* ** *** *** ** * * * * ** * * *
19464805 T-CGCCTGCCCGCTCGTTTC-GTCGGT-TG-G--C-TTA-G-GC-ATACGGAGTTCATTCCTAG-
151 TCCGGC-GATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGAT-GGGTGCTGGTACTTGGC
* * * * *** ***** * * * * * * * * *
19464859 TCTAAGATTGG-ACTAGATCAAGGGTTATAA--TAGA-AAGATCGACA--GCATGCAGATGGGGA
214 CCTTATATTGGCCCCCTATCCCTCATCA-AACCTCGAGAA-CTC-ACACCCCCT-TA-AAGAGCA
*** ** * * *** *
19464918 CCCGATCGATCCT-C-GGCTTGC-G-CA-TCCCGCCACTCGTTTCGTGGGTTACAGCAGAAAGAC
274 TTTGA--GATTTTACAGGTTTGCTGCCAGT--AGCCA-T--TAAAGT--G-T----CTG-AA-A-
* ** * * * * *
19464978 TGAGCGCCCGCACGCTCGTTTC--GTGGGT----TAA-CTTAG-GCA-TACAGAGTTCATTCCCA
322 TG-G-G---G-ACACTTTTTTCAAAT-GGTCACAAAATCTT-GTACACTTC-GAGTT--TT--TA
** * *** * * * * * * *
19465034 GTCCAAGATTATAGAGTTG-ATTCCCAATCTAATAT-CGAACCAGACCGAGGGTTGCGGCAGCAC
374 G-CTGA-ATTTTTTTG-TGCA-TGCCAA-CAAAAATAC-AA--GGATC-A-CG-T-C--TA-C-C
* * * * *** ** * * **** **** ** * * * **
19465097 ATGCTGGGCTAGGGCATGTGCTGGTGCCGCATTTTTCTTTGTCGAGGCACCATTGCCG-AAGCA-
423 AAGTTTGG---GGCCA-AAACTCCTTCCGAAAAAAT-TTTAAAAAATCTCGA--ACCGTAAAAAG
* * * ***** ** ** * * ** * ****** * *
19465160 TCATCAGAGAA-CCTG-ACCGGCGGCATTGGGT-TTCCGGCAATCGGGGGGGC-CG-G-GGGGTG
481 T-TTCA-AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT-GAAACTTCACGTGAAGGCT-
* ** ** * * * * * * *
19465219 T--GCG-CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT-CCCT-C
542 TAAGGGAC-CAT--TGT---ATGAAT--T--TAC-AAGCCATAAAAATGG---CAT-TGGCATGC
* ** * ** * * ** * * * * ** *
19465279 ATCAAACCTCAAGAACT--C-ACACCC-CTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
592 A-GAAATATGAAGATGTGCCTAAACCCAC-CT-ACCACCCTAT-CGA-TCCAC-GGCTTGC-G-C
* * * * **** * * ***** ** ** *
19465340 AGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTGCACTT
649 A-T--CC-----CGTCTCT---CT--GG-C-C-GGCGT--AGT-G-CCCGCCCGCCCGCCCGC-T
* * * *** * ** * * * *
19465405 CGAGTTT-TTAAATGAATTTTTTTATGCATACCAAAAAAAAATACAAAGATCAC-GTCTACCAAG
693 C--GTTTCGT---CG-GTTGGCTTAGGCATA-C-----GGAGTTC--A-TTCCCAGTCT---AAG
* * * * *** ***** * * * * ** * * *
19465468 TTTGGCTCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTGGAACCGCAAAAAGTTTCAAAAAT
740 ATCGG-ACC-AGA---C--C-G----AGGGTTGCGGCAGCAGGATCGGCAGCACG---C--AGAG
* * *** ** ** ** **** ** * ** *
19465533 CGTGA-AAAATAGAAAACGAGTTGTCTTGC-CATGAAACTTCAC-GTGAAGGCTTAAG-G---G-
788 GGGGACCCGACCG-ATCCCCG--G-CTTGCGCATCCCGCCCCTCTG-GCCGGC-TGAGCGCCCGC
* * ** * * ** ** * * ** *
19465590 AC-CAT--TGT-ATGAATTTAC-AACCCATA-AAAATGGCATTGGCACG-CAGAA
847 ACGC-TCGTTTCGTGGGTTGACTTAGGCATACGGAGT-TCATTCCCA-GTC-TAA
** ** * ** * ** * ** * * * * * *
19465638 ATATAAAGATGTGCCTAAACCCA-CCTACCACCCTATC-GATTC-ATGGCTTGC-GCATCCCGT-
1 GCATACGGA-GT-TC-ATTCCCAGTCTAAGATCGGACCGGA-CCGA-GGGTTGCGGCAGCACATG
** * * *** ** *
19465698 CT-CTCTGGCCGGCGTAT-TGCCCGCCCGCTCGTCGGCTCGCTCGCTTCGTCGGTTGGCTTAGTC
61 CTGGGCT--CCGGC--ATGTG-CTG---G-T-G-CCG-TATTTTTCTTC-TCGG--GGC--A-CC
* ** * * * * * *** *
19465761 AT-ACGGAGTTCATTCCCAGTCTAAG-ATCGGACCGAACCGAAGGTTGTGGCAGCAGGATCGACA
108 ATCTCGGAG--CA-T--C-GTCGGAGAACCTGACCG-GCGGCA--TTG-GGGTTCCGG--CG--A
* * * * * * * *
19465824 GCACGTAGAGGGGGACCCGGTCGATCCCCGGCT-TACGAATCCTGCCCCTCTGGTCGGTTGAGCG
159 --TCG--G-GGGGG--CCGG--G------GGGTGTGCGCA-CATG---ATGT-G-C-GATG-G-G
* * * * *** * * *
19465888 CCTGCACGATTGTTTCATGG--GTTA-ACTTAGGCATACGGAGTTCATTCC-CAGTCTAAGCATA
200 --TG--C---TGGTACTTGGCCCTTATA-TT-GGC---C--CCCT-ATCCCTCA-TC-AAACCT-
** *** ** * ** * * * * * * *
19465949 CG-GAGTTCATTTCCAGTCT-AAGATCAGATCAGA----CCGAGGGTTAC-GGCAGCA--CGTT-
247 CGAGAACTCACACCCCCT-TAAAGAGCATTTGAGATTTTAC-AGGTTTGCTGCCAGTAGCCATTA
* * * * * * *** * * * * *
19466004 -TGGGCTCGGGCAAGTGTTGGTGTCGTATTTTTCTTCAGCGGGGCAC--CATCGTCGAAAAACCT
310 AAGTG-TC-TG-AAATG--GG-GAC--ACTTTT-TTCAAATGGTCACAAAATC-TTG-TACA-CT
* *** * * **** * * ******* * *
19466066 GACCGACGGCATCAG--G-GTTCCGATGATCGGAGGGGCCAGGGGGTGTGCGCACATGAT-ATGC
363 --TCGA-GTTTTTAGCTGAATTTTTTTG-T-GCA--TGCCAACAAAAAT--ACA-AGGATCA--C
* * * * * * * ** **** ** * ** ***
19466127 GATGGGT-GCTAGTACTT-GGCCCTTATATTGGCC--CCCTATCCCTCATCAAACCTGGAGAACT
416 G-T--CTACCAAGT--TTGGGGCC-AAAACT--CCTTCCGAAAAAATTTTAAAAAATCTCGAAC-
** *** * * * * * * *** * * * *
19466188 CACACCCA-CTT-AAAGAGCAT-ATGAGATTTTACA-G-GT-TTGC-TGCCA-GTAGC-T---GT
472 CGTAAAAAGTTTCAAAAATCGTGA-AAAATAGAAAACGAGTCGT-CTTGCCATGAAACTTCACG-
* * * * * * ** *
19466241 TAAAGTGTCTGAAATGGGGA-CACTTTTTTCAAATGGT-C--G-CA-AAATCTTGTACACTTCGA
534 TGAAG-G-CT-TAA--GGGACCA-TTGTAT-GAAT-TTACAAGCCATAAA-AATG-GCA-TT-G-
** * *** * ** * *** *
19466300 GTTTTTAGCTG-AATATTTTTG-TGCATGCC-AAGA--AAAATACAATGGTCA-CG-TCCACCAA
586 G--CAT-GCAGAAATA-TGAAGATG--TGCCTAA-ACCCACCTACCACCCT-ATCGATCCA-C-G
* * **** * * ****** ** ***** * ******* *
19466358 GTTTGGGGCCA-AAAATC-CTTTCGAAAAAATTTTAAAAAATCCCGAACCG-TAAAAAATTTCAA
641 GCTT-GCG-CATCCCGTCTCTCTGGCCGGCGTAGT--GCCCGCCCG-CCCGCCCGCTCGTTTC-G
**** *** * * * * ** ** ** *
19466420 AAATTATGAAAAATA-GAAAAC-AAGTCGTC-TTGCCA-TGAAACTTC--ACGTGA---AGGCTT
700 TCGGT-TG--GCTTAGGCATACGGAGT--TCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * *** *** * * ** *** ***** *
19466476 AAG-GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG-CATGTAGAAATATAAAGAT
760 --GCGG--CA--GCA-GGATCGGC-AG-CACGCAGA-GG---GGGACCCG-ACCGATCCCCGGCT
** * * * *
19466539 GTGC-CTAAACC-CACCTACT-ACC--CT-ATCGATCCACAGCTTGCGCATCCCGTCTCTC-TGG
811 -TGCGC-ATCCCGCCCCT-CTGGCCGGCTGAGCG--CC-C-GC--ACGC-T--CGT-T-TCGT-G
* *** * * ** * * ** * *
19466597 CAGGTAT-AGTGCCCGCCTGCCCGTCCGCTCGTTTTGTCGGTTGGCTTAG
861 --GGT-TGACT-TAGGCAT--ACG-GAGTTC--ATTCCCAG-T--C-TAA
* * *
19466646 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGACA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC-G--GCA-G--C-ACA
* ** * ** * **** * ***
19466711 -GCACATAGAGGGGGTCCCGGTCGAT-CCCTGACTTACGCATCCCACTCCTCTGGTCGG-TTGAG
59 TG--C-T----GGGCT-CCGG-C-ATGTGCTG-GTGCCGTATTTTTCTTCTC-GG--GGCACCA-
* * ** * ** ** *** *
19466773 TGCCCGCACGC-TCGTTTCGTG-G--GTTGACTTAGGCATACAAAGTTAATTCCCAGTCTAAGCA
109 T-CTCGGA-GCATCG--TCG-GAGAACCTGAC--CGGC-GGCATTG-GGGTT-CC-GGC---G-A
* * ** *** ** * * **** *
19466834 TCCGGAGTTCATTCCCAGTCTAAGAT-CGAACCCGATCGAGGGTTGCGGCACCCCATGCTGG-GC
159 TCGGGGGGGC---CGGGGGGT--G-TGCG--CAC-AT-GA-TG-TGC-G-A-TGGGTGCTGGTAC
* * * ** * * *** * * * *
19466897 TCGGGCATT-TGCTGAG-GCCGTATTTTTCTTCGGAAGGGCACCATCGTCGGAGCATCGTCAGAG
209 TTGGCCCTTATATTG-GCCCCCTATCCCTCATC--AA----A-C--C-TC-GAG-AAC-TCACAC
** * ** * * * ** ** * ** * **
19466960 AACCTGACCGA-CGGTATTGGGGTTCCAACGATCGAG-GGGTCGGGGGAGGTGTGTGCACATTGC
260 CCCCTTAAAGAGC-AT-TTGAGATT-TTAC-A--G-GTTTG-C-TGCCA---GT-AGC-CATTAA
** * * ** ** * **
19467023 A-TG-C-GCGATGGGTGCTGGTCATTGGCCCTTATATTGGCCCTATCCCTCATCAAACCTCAAGA
311 AGTGTCTGAAAT--G-G--GG--A----CACTT-T-TT--TCAAAT-GGTCA-CAAA-ATCTTG-
* ** * **
19467085 AACTCACACCCCTTAAAGAGCATTT-G-AG-ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
357 ---T-ACA---CTT--CGAGTTTTTAGCTGAATTTT-----TTTG-TG-CA-T-GCCAACAAA--
** * * ** * ***
19467147 GTTTGA-AATGGGGA-CACTTTTTTTCAA---T-GGTCACAAAATCTTGTGCACTT-CG--AGTT
402 -AAT-ACAA---GGATCAC-GTCTACCAAGTTTGGGGC-CAAAA-C---T-C-CTTCCGAAAAAA
* * * ** * * * ** *
19467203 TTTTAAATGAATTTTTTTATGCATACC--AAAAAAATACAAAGATCACGTCTACCAAGTTTGGCT
454 TTTTAAA--AA---ATCT-CG-A-ACCGTAAAAAGTTTCAAAAAT--CGT-GA--AA-AATAG--
** * * ** ** * * **
19467266 CCAAAAC---TCCGTC-TG--AAAAAATTTTA--AAAAATC-T--GGAACC---GCAAAAAGTTT
503 --AAAACGAGT-CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TTT
* ** * * * * * *
19467317 CAAAAATCGTGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
564 -ACAAGCCAT-AAAAAT-G---GC-A-TTGGCATG-CA-GAAA--T-A--TGAA-G---ATGTG-
** *** ** * * *** * * * * *** *
19467382 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG-TATGTAGAAATATAAAGATGTGC-CT
609 CC--TAAACCCACCTACCA-CCCTATCGAT-CCA-CGGCT-TG-CG---CATCCCG-TCT-CTCT
** ** * * * *** ** * * ** ** *
19467445 AAACCCACCTACTACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGC--AGGTATA-GT
662 -GGCCGGCGTAGTGCCCGCCCG--CC-C-GCCCGCTCGTTTCGTCGGT-TGGCTTAGGCATACG-
**** * * * * *** * **
19467507 GCCCGCCTGCCC-GTC--CGCTCGTTTC-G-TC---GGTT--GGC-TTAGGCATACGG-AGTTCA
720 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGG-AT-CGGCAG--CA
* ***** * * * * ** * * * * **
19467560 TTCCCAGTCTAAGATCGGACCAAACCAAGGGTTGCAGTAGCAGGATCGACAGCACATAGAGGGGG
781 --CGCAGAGGGGGACCCGACCGATCCCCGGCTTGC----GC---ATC--CCGCCCCT----CTGG
* * * * *
19467625 TCCCGG-TCGATC-CCTGACTTACGCATCCCACTCCTCTGGTCGGTTGAGTGCCCGCACGCTCGT
831 --CCGGCT-GAGCGCCCG-C--ACGC-T--C-GT--T-TCGTGGGTTG-----------------
** *
19467688 TTCGTGGGTTGACTTAGGCATACAAAGTTAATTCCCAGTCTAA
866 -----------ACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19467731 GCATCCGGAGTTCATTCCCAGTCTAAGATCGAACCCGATCGAGGGTTGCGGCACCCCATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19467796 CTCGGGCATTTGCTGAG-GCCGTATTTTTCTTC-GGAAGGGCACCATCGTCGGAGCATCGTCAGA
66 CTCCGGCATGTGCTG-GTGCCGTATTTTTCTTCTCG--GGGCACCATC-TCGGAGCATCGTCGGA
* * ** * * * *
19467859 GAACCTGACCGACGGTATTGGGGTTCCAACGATCGAGGGGTCGGGGGGAGGTGTGTGCACATGAT
127 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGC-CGGGG-GGTGTGCGCACATGAT
*
19467924 GCGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
190 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
** *
19467989 CACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTTAGTAGCCATTAAATTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
19468053 AATGGGGACATTTTTTTCAAATGGTCACCAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * *
19468118 TTATGCATGCGAACAAAAATACAAGGATCACGTTTACCAAGTTTGGGGCCAAAACTCCTTTCGAG
385 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* ** * ** *
19468183 AAAATTTTGAAAAATCTCGAACCAAAAAAAGTTTTAAAAATTATAAAAAATAGAAAACGAGTCGT
450 AAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
19468248 CTTGCCATGAAACCTCACGTGAAGGCTTAAGGGACCATTGTAAGAATTTACACGCCATAAAAATG
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
19468313 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATTGATCCACAGCTT
580 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
19468378 GCGCATCCTGTCTCTCTGGCCGGCGTAGTGCCCGCCCTCCCGCCCGCTTGCTCATTTTGTCGATT
645 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CC-C--GCTCGTTTCGTCGGTT
* * * * *
19468443 GGCTTAGGCATACGGAGTTCATTCCCA-TCTAAGATCAGACCAGACTGAGGGTTACAGCAGCAAG
706 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGG
* * * * * *
19468507 ATTGGTAGCACGCAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCAGGGCGGC
771 ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * *
19468572 TGAGCG-CCGACACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCTCATTCCAA
836 TGAGCGCCCG-CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
19468634 GCATACAGAGTTGATTTCCAATCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * *
19468699 CTAGGGCATGTGCTGGTGCCGCATTTTTCTTCGTTGAGGCACCAT-TGCCGGAGCATCGTCGGAG
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCT--CGGAGCATCGTCGGAG
*
19468763 AACCTGACC-GCGGCATT-GGGTTCC-G-AATC-GGGGGGCCGGGGGGGGTGTGCGCACATGATG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--GGGGGGTGTGCGCACATGATG
19468823 TGCGATGGGTGCTGGTACTTGG-CCTTATATTGGCCCCCTATCCCTCATCAAACCTCG-GAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * * *
19468886 ACA-CCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGCAG-CATTAAAGTGTTTAAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
19468949 ATGGGGACACTTTTTTC-AAT-GTCAC-AAATCTTGTACACTTCGAG-TTTTAGCTGTATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * ** * ** *
19469010 TGTGCAAGCCAAAAAAAATACAAGGATCACGTCTACTGAGTTTGAGGTGAAAACTCCTTCGGAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * *
19469075 AAATTTTAAAAAATC-CTGAACTGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGT
451 AAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
19469139 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAATCCATAAAAATG
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
19469204 GCATTGGCATGCATAAATATGAAGATGTACCTAAACCAACATACCACCCTATCGATCCACGGCTT
580 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * * * *
19469269 GCACATCTCATATCTCTGGTCGGCGTAATGCCCGCCTGCCCGTCCGCTCGTTTCGTCGGTTGGCT
645 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * * * * ** * *
19469334 TAGGCATACGGAGTTTATTCCTAGTCTAAGATCAGACCAAACCAAGGGTTATGGCTGCTA-GATT
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGC-AGGATC
* * * * * *
19469398 GGCAGCATGAAGAGGGGGACCCGACCAATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGTTGG
774 GGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * *
19469463 GCGCCCGCATGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTCA
839 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19469522 GCATACGGAGTTCATTCCTAGTCTAAGATCAGACTGGACTGAGGGTTGCAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * ** * * *
19469587 CT-CGAGCATGTGCTGGGGCAGCATTTTTCCTCACCGGTCCACCATTGTCAGAGCATCGCCGGAG
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCA-TCTCGGAGCATCGTCGGAG
* * * *
19469651 AACTTGACCGGTGGCATTAGGGTTCTGGCGATCGGGGGGGCCGAGGGGGGTGTGCGCACATGATG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--GGGGGGTGTGCGCACATGATG
* *
19469716 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTT
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
19469781 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
19469846 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACGCTTCGAGTTTTTAGCTGAATTGTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
19469911 TGTGCATTCCAACAAAAATACAAGGATCACGTCTACCATGTTAGGGGCCAAAACTCCTTCCAAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * *
19469976 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAATGAGTCGTC
451 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * *
19470041 TTGCCAATGGAAAACTTTCACGTGAAGGCTTAAGGGGAACCAATTGTTTTTAATTTTACCAGCCA
516 TTGCC-AT-G-AAAC-TTCACGTGAAGGCTTAA-GGG-ACC-ATTG-TATGAA-TTTACAAGCCA
*
19470106 TAAAAATGGTATTTGGCATGCA-AAATATGAAGATGTGCCTAAACCCACCTACCACACCTATCGA
572 TAAAAATGGCA-TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAC-CCTATCGA
* * * * * * * *
19470170 TCCACGGCTTACGCATCCCGGTCTCTCCGGCAGGCATAGTTGCTCGCCCGCCCGCCTGCTTGTTC
635 TCCACGGCTTGCGCATCCC-GTCTCTCTGGCCGGCGTAG-TGCCCGCCCGCCCGCCCGCTCGTTT
* * ** *
19470235 CGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGACCAAACC-GAATCGAGGGTTGC
698 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGC
* * * * * * * *
19470299 GGTAGCAGGATCGGCAGCATGAAGAGGGGGACCCGATCGATCCTCGGCTTGTGCATGCTGCCCCT
762 GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* * *
19470364 CTGGCCGGCTGAGCGCCCGCACGCACGTTTCGTGGTTTGACTTAGGCATACGAAGTTCATTCCCA
827 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
*
19470429 GCCTAA
892 GTCTAA
** ** * * * ** * *
19470435 GCATATAGAGTTCATTCCCAGTCTAAGATAAGATCAGACCGAAGGTTGCACCAACACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * * * **
19470500 CTCGGGCATGTGCTAGG-GATGCATTTTTCTTTGTCGGGGCACCATCGCCAGAGCATCGTTAGAG
66 CTCCGGCATGTGCT-GGTGCCGTATTTTTC-TTCTCGGGGCACCATC-TCGGAGCATCGTCGGAG
*
19470564 AACCTGACCGGCGGCATTGGGGTTCCGGGGATC-GGGGGGCCGGGGAGGTGTGCGCATATGATGT
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGG-GGTGTGCGC-----A---
*
19470628 GCGATGGGTGATGGTGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
184 -C-A----TGA---TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
* * *
19470693 CAAACCTTGAGAACTCACACCCCCTTAAAGAGCATGTGAGATTTTACAGGTTTGCTACCAGTAGC
240 CAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
* *
19470758 TATTAAAGTGTCTCAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
305 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
* * ** * *
19470823 TTTACCTGAATTTATTTGTGCGCGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGAC
370 TTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
* * * * * * *
19470888 AAAACTCCTTCTGAAAAAATTGTAAAAAATCCCAAACCGCAAATAGTTTTAAAAATCGTGAAAAA
435 AAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAA
*
19470953 TAGGAAACGAGTCGTCTTGCCATG-AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
500 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
19471017 CAAGCCATAAAAATGGCATTGGCATGCAGAAACATGAAGATGTGCCTAAACCCACCTACCACCTT
565 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
** * *
19471082 ATCGATCCACGGCTTGCGCATCCCGTCTCTC-CACCGGCGTAGTGCCCGCCCGCCCGACCGCCCG
630 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCG
* * * **
19471146 CTAATCTCGTCGGTTGGCTGAGGCATATGGAGTTCATTCCCAATCTAAGATTAGACCAGA-CGAG
695 -T--T-TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGA-
** * * * *** **
19471210 GGGTTGTAGCAGGAGGATGGGCAACACGCAGAGGGGGACCCGGTTGATCCCCGGCTTATGCATCC
755 GGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCC
* ** * * **
19471275 TGCCCCTCTGGTTGGCTGAGCACCCGCACGCTCGTTTTGTGGG-TGACTTAGGCATATAGAGTTC
820 CGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
19471339 ATTCCCAGTCTAA
885 ATTCCCAGTCTAA
* * *
19471352 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19471417 CT-CGACCATGTGCTGGTGTCGCATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATCG-CTAGA
66 CTCCG-GCATGTGCTGGTGCCGTATTTTTC-TTCTCGGGGCACCATC-TCGGAGCATCGTC-GGA
* * * * *
19471480 GAACCTGGCCGCCGGCATTGGGGTTCCAGCGATTGGGGGGGCCCGGGGGGGTGTGTGCACATGAT
127 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGG-CC-GGGGGGTGTGCGCACATGAT
* * *
19471545 ATGCAATGAGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
190 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
19471610 CACACCCACTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGCAGCCTTTAAAGTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
*
19471675 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * * * ** *
19471740 TTGTGCACGCCAAGAAAAATAAAAGAATCATGTCTACCAATTTTGGGGCCAAAACTGTTTTCGAA
385 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * ** * * * * * *
19471805 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAACAAAAAATGCGACGT
450 AAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
19471870 CTTGCCATGAAACTTCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
19471935 GCATTGGCCTGTAGAAATATGAAGATGTGCCTAAACGCACCTACCACCCTATCGATCCACAGCTT
580 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* *** *
19472000 GCGCATGCCGTCTCTCTGTTAGGCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCT
645 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * * * *
19472065 TAGGCATACGGAGTTCATTCCCAGTCTAAGATC-AAGCAAGACTGAGGGTTACGGTAGCAGGATC
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA-CCAGACCGAGGGTTGCGGCAGCAGGATC
** * * * *
19472129 GGCAGCACGCAGAGGGGGACCCGGTCGAACCCCGGCTTGCACATCCTGCCCCTCTGGCAGGCTGA
774 GGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
*
19472194 ACGCCCGCACGCTCGTTTCGT-GG--G---T-----T---GA--T--TT---AG-----
839 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
19472227 GCATACGGAGTTCATTCCCAATCTAAGATCGGACAGGACCGAGGGTTACGGCAACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** ** * *
19472292 CTCAAGCATGTGCTGGCACCGCATTTTTCTTCATCGGGGCACCATCGCCGGAGCATCGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * ** *
19472357 ACCTGACCGACGGCATTGGGGTTCAGGCGATCGGGGGGG-CGGGGGGTGTGCAAACATGATGTGT
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * * *
19472421 GATGGGTGCTGGTACTTGGACCATATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTTACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19472486 CCCCCTTACAA-AGCATTTGAGATTTTGCAGGTTTGCTGTCAGTAGCAATTAAAGTGTCTGAAAT
259 CCCCCTTA-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
19472550 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACGCTTCGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
19472615 TGCATTCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCCGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * *
19472679 ATTTTCACAAATC-CTGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
453 ATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19472743 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
19472808 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTATCACCCTATCGATCCATGACTTGC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
19472873 GCATCCCATCTCTCTGGCTGGCGTA------G--CGCCCACCCGCTCATTTCATCGGTTGGCTTA
647 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * * * * *
19472930 GCCATACGGAGTTCATTCCCAGTCTAACATCAGACC-GAACCAAGGGTTGCGACAGCAGGATCGA
712 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGGCAGCAGGATCGG
* * * * * * *
19472994 CAGCACGCAAAGGGGGACCCGATCGATCCTCGGCTTGTGCATCCCGCCCCTCTGCCCGGTTGAGT
776 CAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
* * * *
19473059 GACCGTACGC-AGATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T--
841 GCCCGCACGCTCG-TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
19473112 -C-TA---AG---A-T--C-G-----GATC--A---GACTGAGGGTTACGACAACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19473155 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCAGGGCACCGTCGTCGGACCATCGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * * ** *
19473220 ACCTGACCGGTGGCATTCGGGTTCTGACGATCGGGGGGGCTAGGGGGTGTGCGCACATGACGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
19473285 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
19473350 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATA
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19473415 GGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
19473480 GCATGCCAACAAAAATAGAAGGATCACGTATACCAAGTTTGGGG-------------C-------
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * *
19473525 --------AATC-C--A---T--AAAGTTTCAAAAATCGTGAAAAATAAAAAATGAGTCGTTTTG
454 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
19473574 CCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAGGGCAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * *
19473639 TGGCATGCAAAAATATGAAGATGTGCCTAAACCCAGCTACCACCCTATCGATACACGACTTACGC
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * *
19473704 ATCCTGTCTCTTTGGCAGGCGTAGTGCCCGCCCATCCGCCCGCCCGCTCATTTCGTTGGTTGGCT
649 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCG--C--CCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * * ** * *
19473769 TAGGCATACGGAGTTCTTTCACAGTCTAAGATCGAACCAGATTGAGGGTTGTGGCAGCAGGATTG
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCG
* * * ** * * **
19473834 GTAGCACGTAGAGGGGGACCCAACTAATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGATTGAG
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
*
19473899 CGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19473957 GCATACGGAGTCCATTCCCAATCTAAGATCGGATCGGACCGAGGGTTACAGCAACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * * * **
19474022 CTCAAGCATTTGCAGGTGCCGTATTTTTCTTCACCGGGGTACCATCGTCAGAGCATCACCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * * * *
19474087 ACCTGACCCGCAGCATTGGGGTTCCGGTGAACGGTGGGG-C------TG-G-G-----GGTGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* ** *
19474138 GATGGGTGCTGGTACTTGGCCCTTCTATTGGCCTTCTATCCCTCATCAAACCTCGAGAACTGACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
19474203 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTACCCATTAAACTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
19474268 GCGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTA-CATGAA-TTTTTTA
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC-TGAATTTTTTTG
* *
19474331 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCCAAAACTCCTGCCGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* ** **
19474396 ATTTT-AAAAATCCCGAACCCCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAAC-AGGTCGTCT
453 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA-GTCGTCT
* * *
19474459 TGCCATG-ACCTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTTCAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * * *
19474523 ATTGGCACGCA-AAATATAAAGATGTGCCTAATCCCACCTGCCACCCTATCAATCCACGGCTTGC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
19474587 GCATCCCGTCTCTCTGGCCGGCATAGAGCCCGCCTGCCCGCCCGCCCGCTCGTTTCGTCAGTTAG
647 GCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
** * * * * * *
19474652 CTTAGGCATATAGAGCTCATTCCTAGTCTAAGATCAGATCGGACCGAGGGTTGTGGCAGCAGGAT
708 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * * * * * * * *
19474717 CGACAGCATGCAGAGGGGGACCAGGCCGATCCCCGACTTGCGTATCCTGCCCCTCTAGCTGGTTG
773 CGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * * *
19474782 AGCGCCCGTATGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTAATTCCCAGTCTAA
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
19474842 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACC-GACTGAGGGTTACGACAGCACATGATAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
19474906 TTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGGCACCATCGTTGGAGCATCGTCGAAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * * * * * *
19474971 ACCTGATCGACAGCATTAGGGTTCCGACGATCGGGGGGTCGGGGGGGTGTGCGTACATGATGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* *
19475036 GATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19475101 CCCACTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
19475166 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACATTTTGAGTTTTTAGCTGAATGTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
19475231 GCATGCCAACAAAAATACAAGGATCACGTCTACCAGGTTTGGGGCCAAAACTCCTTCCCAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * *
19475296 TTTTAAAAAATCTCGAACCGCAAAAAGTTTCACAAATCATGAAAAATAGAAAACTAGTCGTCTTG
454 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* * **
19475361 CCATGAAACTTTACGTGAAGGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTACAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
19475426 TGGCTTGCAGAAATATGAGGATGAGCCTAAACCCACCTACCACCCTATCGATCCTCGGCTTGCGC
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * *
19475491 ATCCTGTCTCTCTGGCCGACGTAGTGACCGCCCGTCCGCCCGCCTGCTCGTTTCGTCGATTGGCT
649 ATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * * * *
19475556 TAGGTAAACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCATGATCG
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCG
* * *
19475621 ACAGGACGCAGA--GGG----G--C-A--CCCGG--T-CG-ATCCCAG--ACT-T-----GC--A
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCC-GCCCCTCTGGCCGGCTGA
* *
19475661 ---CCCGTACGCTCGTTTCGTGGGTTGACTTACGCATACGGAGTTCATTCCCAGTCTAA
839 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
19475717 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
19475782 CTCGGGCATGTACTGGTGCCATATTTTTCTTCGTCGGGG---CA---C----CATCGTCGGAGAA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* ** * *
19475837 CCTGACCGACGGCATTGGGGTTCCGATGATCAGGGGGGCCGGGGGGGTGTGCGCACATAATGTGC
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGC
*
19475902 GATGGGTGCTGGTAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
*
19475967 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCCGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
19476032 GGGAAACGTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
19476097 GCATACCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACACCTTCCGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * * *
19476161 TTTAAAAAAATCCCGAACCGCAAAAAGTGTAAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
454 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
19476226 CCATGAAACTTCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * *
19476291 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACTACCCTATCGATCCATGGCTTGTGC
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
*
19476356 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGG
649 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * * * * ** * *
19476421 CATACGGAGTTCATTCCCAGTCTAAAATCTGACCGGACTGAGGATTACGATAGCAAGATTGGCAG
714 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAG
* * * * * *
19476486 CACGTAGAGTGGGACTCGGA-TGATCCCCGGCTTGCGCATCCC-TCCCTCTGGCCGACTGAGCGC
779 CACGCAGAGGGGGAC-CCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
19476549 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * **
19476604 GCATACGAAGTTCATTGCCAGTCTAAGATCGAACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * * * *
19476669 CTCGGGCAAGTCCTGGTGCTGCATTTTTCTTCGCCGGGGCACCATCGTCGAAACCTCGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * *
19476734 ACCTGATCGGCCGCATTGGGGTTCCGACGAT---------C-GGGGGTGTGCACACATGATGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * *
19476789 GATGGGCGCTGGTACTTGGCCCTTATTTTGGCCCCCTATCCCTTATCAAACCTTC-AGAACTCAC
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAACTCAC
* * *
19476853 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCTATTAAAGTGTCTAAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
19476918 GGGGACACTTTTTTCAAATGGTCACAAAGTCTTGTGCACTTCGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * * * * * *
19476983 CGCATCCCAAAAAAAATACAACGATCACATCTACCAACTTTGGGGCTAAAAGTCCTTCCAAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
*
19477048 ATTTTAAAAAATGC-CAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
453 ATTTTAAAAAAT-CTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
19477112 TGCCATGAAACTTCACGTGAATGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
19477177 ATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTAC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
19477242 GCATCCCGTCTCTCTGGCCAGCGTAGTGGCCGCCCGCCTGCCTGCTCGCTCGTTTTGTCGGTTGG
647 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-C--CC-GCCCGCTCGTTTCGTCGGTTGG
* * ** * ** *
19477307 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGAGGGTTTTGACAATAAGAT
708 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * ** * * ** **
19477372 CGACAGTACGCTGAGGGGGACCCGGTCGATCCCCGGCTTACGCATTCTACCCCTCTGGCCATCTG
773 CGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * * *
19477437 AGCGCCCGCTCGCTTGTTTCTTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAA
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
19477497 GCATACGAAGTTCCTTCCCAGTCTAAGATCAGACCGGACTGAGAGTTGCGACAGCACTTGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
19477562 CTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCAGAGCATCGCCGGGGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
*
19477627 ACCTGACCGGCGGCA------TT---G-GA-----GGGGCCGGGGGGTGTGCACACATGATGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* *
19477677 GATGGGTGCTGCTACCTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * * *
19477742 CCCCCTTAAAGGGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCGATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
** * * *
19477807 GGGACTTTTTTTTCAAATGG-CTACGAAATGTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTG
324 GGGACACTTTTTTCAAATGGTC-ACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
** *
19477871 TGCATGCTGACAAAAATACAAGGATCACGTCTA-AAACGTTTGGGGCCAAAACTCCTTCCGAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAA-GTTTGGGGCCAAAACTCCTTCCGAAAA
* * *
19477935 AATTTTAAAAAATAC-CGAACCCTAAAAGGTTTCAAAAATCGTGAAAAATAGAAAACTAGTCGTC
452 AATTTTAAAAAAT-CTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* *
19477999 TTGCCATGAAACTTCACGTGAATGCTTAAGGGACCATTGTATTAATTTACAAGCCATAAAAATGG
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
19478064 CATTGGCATGCAGAAATATGAAGATGTTCCCAAACCCACCTACCACCCTATCGATCCACGGCTTG
581 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * *
19478129 CGCAT-CC--CTCTCTGGCCGGGGTAGTGCCCGCGCGCCCGCCCGCTTGTTTCGTCGATTGGCTT
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * * * *
19478191 AGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACTGAGGGTTGTGGCAGCAGGATTGA
711 AGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGG
* * *
19478256 CAGCACGCAGAGGGGGACCCGACAGATCCCCAGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGC
776 CAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
* * * *
19478321 GCTCACACGCTCGTTTCATGGGTTGACTCAGGCATACGGAGTTCATTCCCAGTCTAA
841 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19478378 GCATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGGACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *** *
19478443 CTCGGGCATGTGCTGGTGCTACATTTTTCTTCATCAGGGCACCATCGTCGGAGCATCGTCGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTCGGAGA
** ** *
19478508 ACCTGACC-GCGGCATTGGGGTTCCTACGATCCTGGGGGCCGGGGGGTGTGCACACATGATGTGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* *
19478572 GATCGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATACCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
19478637 CCCCCTTAAGAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
259 CCCCCTTAA-AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
19478702 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTGCACTTCGAGTTTTCAGTTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
*
19478767 TGCATGCCAACAAAAATACAAGGATCAGGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* ** * * * *
19478832 ATTTTAAACAATC-CTGAACCACAAAAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCT
453 ATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
** * * *
19478896 TGAGATGAAACTTCACGTGATGGCTTAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * * *
19478961 ATTCGCATGTAGAAATATAAAGATGTGCCTAAACCCACCTCCCACACTATCGATCCACGGCTTGC
582 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * *
19479026 GCATCCCGACTCTGTGGCCGGTGTAGT----GCCCACCCGCCCGCTCATTTCGTCGGCTGGCTTA
647 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * * * * * * * *
19479087 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGATCGAGGATTGTGGCAGCAAGATCAGT
712 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGC
* * *
19479152 AGCACGCAGAGGGGGACCCGACCAATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
777 AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
*
19479217 CCCGCACGCTGGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
842 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19479273 GCATACGAAGTTCCTTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCGACAGCACTTGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
19479338 CTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA--TC---G---C--CGGAGAA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAGAA
* * * *
19479393 CCTGACCGACAGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATAATGTGCG
130 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
19479457 ATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
19479521 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
19479586 GGACACTTTCTTCAAATGGTCACAAAATCTTGTGCACTTCGAGTTTTCAGCTGAATTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
19479651 CATGCCAGCAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* ** * * * *
19479716 TTTAAACAATC-CTGAACCACAAAAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCTTG
455 TTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
** * * *
19479780 AGATGAAACTTCACGTGATGGCTTAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGCAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * *
19479845 TGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTCCCACCCTATCGATCCACGACTTTCGT
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * ** * * * *
19479910 ATCCCATCTCTTTGGATGACGTAGT----ACCCGCCTGCCCGCTCGTTTCGTCGGTTGGCATAGG
649 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * * ** **
19479971 CATACGGAGTTCATTCCCAGTCTAACATCAGACC-GAACTGAGGGTTACGATAGCAGGATCAACA
714 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGGCAGCAGGATCGGCA
* * * * *
19480035 ACACGGAGAGGGAGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCAGCTGAGCGC
778 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* *
19480100 CCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
843 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
19480155 GCATACGGAGTTCATTCCCAGTCTAACATCGAACCGGATCGAGGGTTGCGGCAGCACATG-TCGA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT-GG
19480219 GCT-CGAGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCA--T-----CA---TCGGAG
65 GCTCCG-GCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATCTCGGAGCATCGTCGGAG
* * * * *
19480273 AACCTGACCGACGGCA-TGGGGTTTCGGCGATCGGGGGGGTCGGGGGGGGTGTGTGCACATGTTG
128 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGG-C-CGGGGGGTGTGCGCACATGATG
* *
19480337 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCAAGAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
19480402 ACACCCCCTTAAAGAGGATTTGAGATTTTATAGATTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
19480467 ATGGGGACAC-TTTTTCAAACGGTCACCAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * *
19480531 TGTGCATGCCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGACCAAAACTCCTTGCGAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* *
19480596 AAATTTTAAAAAATCTCGAACCGAAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
451 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
19480661 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
** * * * *
19480726 CATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACTAACCTATCGATCCATGGCATG
581 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
19480791 CGCATCCCGTCTCTCTGGCCGGCATAGTGCCCACACACCCGCCCGGCCACTCATTTCATCGGTTG
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-C-CGCCCGCCCGCCCGCTCGTTTCGTCGGTTG
* * * * *
19480856 GCTTAGGCATATGGAGTTCATTCCTAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGTAGGA
707 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGA
* * * ** * * * * * * *
19480921 TCGACAGCACGTAGAGTGACACCCGACTGATCCCCGACTTACGCATCCCACCCCTCTAGTCGGTT
772 TCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
** * * * *
19480986 GAGC-CCCGCACGCTCGGATCGAGGGGGACTCGATCGATCCTT-GGCTTGC-G-CTTCCCACCCC
837 GAGCGCCCGCACGCTCGTTTC--GTGGG--T---T-GA--CTTAGGCATACGGAGTT--CA----
** *
19481047 TTTGGCAGGCTAA
886 -TTCCCAGTCTAA
*** * ** *** * ** * ** * * * * *
19481060 GCGCCCGCACACTCATTTCGTGGGT-TGACTTAGG--CATACGGA-GTTCATTC-CCAG-ACTAA
1 GCATACGGA-GTTCA-TTC-CCAGTCTAAGATCGGACCGGACCGAGGGT--TGCGGCAGCAC-AT
* * * ******* *
19481119 GCATACGGAGTTCTTTCC-CCA-GT-CTAAGATCGAACCGGACCGAGGGT-T-GTGGCAGCACAT
60 GC-T--GG-G--C--TCCGGCATGTGCT--GGT-G--CCGTATTTTTCTTCTCGGGGCA-C-CAT
* * * * * *****
19481179 GCTTGGCTCAGGCAT-GTGCTGGTGCCACATTTTTCTTCATCGG-GGCACCAACG--CCGAAGC-
110 -CTCGG---A-GCATCGT-C-GGAG--A-A-----CCTGACCGGCGGCATTGGGGTTCCG--GCG
*** * ** * *
19481239 ATCGTCGGAGAACCTAACAGGCGTCATTGGG-GTTCTG-ACGATCGGGGGGGCCGGGGAGGGGTG
158 ATCG--GG-GGGGC---C-GG-G-----GGGTGTGC-GCAC-AT--GATGTG-C---GA-TGG-G
* * ** ** *
19481302 TGCACACATGATGTGCAATGGGTTCTGGTACTCGGCCCTTATATTGGCCCCCTATCCCTCATCAA
200 TG----C-TG--GT--ACTTGGCCCTTATA-TTGGCCC------------CCTATCCCTCATCAA
* * *
19481367 AGCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCAT
243 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
19481432 TAAAGCGTCTTAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
308 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * *
19481497 AGCTGAATTTTTTTGTGCACGCCAACAAAAATACAAGCATCACGTCTACCAATTTTGGGGCCAAA
373 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * *
19481562 ACTCCTTCCCAAAAAATTTTAAAAAATC-CTGAACCGCAAAAAGTTTCAAAAATCTTGAAAAATA
438 ACTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
* * *
19481626 GAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAAGCTTAAAGGACCATTGTATGAATTTACA
502 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* *
19481691 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTACCTAAACCCACCAACCACCCTAT
567 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* *
19481756 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGTC-TAGTGCCCGCCCGCCCGCCCACTCGTT
632 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTT
* * ** *
19481820 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATTGAGGGTTAC
697 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGC
* * * * * * * *
19481885 GGTAGTAGGATTGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGACTTGTGCATCCTGCCCTT
762 GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
*** * *
19481950 CTGGCTTACTGAGCGCCCGTACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
827 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
19482015 GTCTAA
892 GTCTAA
* * * * * *
19482021 GCATATGGAGTTCATT-CCATTCTAAGATCGGACCAGACCGAAGGTTGTGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19482085 CTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGCTGGGGCACCAACGTCGGAGCATCGTTGGAGA
66 CTCCGGCATGTGCTGGTGCCGTATTTTTCTTCTC-GGGGCACCATC-TCGGAGCATCGTCGGAGA
* * * *
19482150 ACCTGACCGGCGGCATTGGGGTTTCGGTGATCGGGGGGCCCGGGGGGTGTGCGCACATGATATGC
129 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* *** * *
19482215 AAT-GGTGCTCACACTTGGCCCTTATATTGGCCCCTTATCCCTTATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19482279 CCCCCTTAAAGAGCCTTTTAGATTTTACAGGTTTGCTGCCAGTAGTCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
19482344 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * **
19482409 GCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGCGCCAAAACTTTTTCCGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * * * *
19482474 TTTTAAAAAATCCCGAACAGCAAAAAGTTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTG
454 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
19482539 CCATAAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
519 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
*
19482604 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
584 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
** ** * *
19482669 ATCGTGTCTCTCTGGCCGGCGTAGTGCCCAACCGCCCGCCCGCTCGTTTTGTCAGTTGGCTTAGG
649 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * ** * ***
19482734 CATACAGAGTTCATTCCCAGTCTAACATCGGACC-GAACTGAATGTTACAATAGCAGGATCGGCA
714 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGGCAGCAGGATCGGCA
** *
19482798 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGTGCCTCTGGCCGGTTGAGCGC
778 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
*
19482863 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTCA
843 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
19482918 GCATA-GGAAGTTCATCCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGTTGG
1 GCATACGG-AGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * *
19482982 GCTCGGGCATGTGCTGGTGTCGCA-TTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CTGGA
65 GCTCCGGCATGTGCTGGTGCCGTATTTTTCTTC-TCGGGGCACCATC-TCGGAGCATCGTC-GGA
* * * * *
19483045 GAACCTGACCGGCGGCATAGGGGTTCCGACGATCGAGGGGGCCGGGGGGAGTGCGAACATGATGT
127 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGT
*
19483110 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACGCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
19483175 CACCCCTTTAAAGCGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19483240 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* *
19483305 GTGCATGCCAACAAAAATACAGGGATCTCGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
19483369 AAGTTTTAAAAAATC-CTGAACCGTAAAAATTTTCAAAAATTGTGAAAAAAAGAAAACGAGCCGT
452 AA-TTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* *
19483433 CTTTCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG--T--A--T-C-A---ATTAAAA--
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
19483485 GC-----CAT-----AA-AT----ATGTGCCTAAACCCACCTACCACCCTATCGAACCACAGCTT
580 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
19483535 GCGCTTCCCGTCTCTCTGGCTGGGGTAGTGCCCACCCGTCCGCCCGCCTGCTCGTTTCGTCGGTT
645 GCGCATCCCGTCTCTCTGGCCGGCGTAGTG----CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTT
* *
19483600 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGGCAGCA
706 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCA
19483663 CATGCTGGGC
Statistics
Matches: 43639, Mismatches: 9660, Indels: 8627
0.70 0.16 0.14
Matches are distributed among these distances:
829 177 0.00
832 1 0.00
834 8 0.00
835 3 0.00
837 6 0.00
838 4 0.00
839 300 0.01
840 11 0.00
841 349 0.01
842 217 0.00
843 394 0.01
844 5 0.00
845 1 0.00
846 16 0.00
847 2 0.00
848 2 0.00
849 11 0.00
850 2 0.00
851 2 0.00
852 53 0.00
853 183 0.00
854 9 0.00
855 10 0.00
856 90 0.00
857 142 0.00
858 384 0.01
859 269 0.01
860 134 0.00
861 151 0.00
862 153 0.00
863 663 0.02
864 326 0.01
865 627 0.01
866 263 0.01
867 387 0.01
868 214 0.00
869 853 0.02
870 287 0.01
871 604 0.01
872 713 0.02
873 211 0.00
874 160 0.00
875 257 0.01
876 238 0.01
877 55 0.00
878 108 0.00
879 146 0.00
880 36 0.00
881 329 0.01
882 708 0.02
883 153 0.00
884 562 0.01
885 538 0.01
886 593 0.01
887 886 0.02
888 1023 0.02
889 135 0.00
890 363 0.01
891 1716 0.04
892 2440 0.06
893 459 0.01
894 1446 0.03
895 968 0.02
896 1646 0.04
897 1312 0.03
898 1160 0.03
899 782 0.02
900 611 0.01
901 746 0.02
902 1676 0.04
903 1687 0.04
904 655 0.02
905 541 0.01
906 45 0.00
907 176 0.00
908 21 0.00
909 29 0.00
910 80 0.00
911 117 0.00
912 132 0.00
913 330 0.01
914 114 0.00
915 629 0.01
916 171 0.00
917 223 0.01
918 230 0.01
919 169 0.00
920 117 0.00
921 235 0.01
922 172 0.00
923 28 0.00
924 8 0.00
925 15 0.00
926 17 0.00
927 106 0.00
928 641 0.01
929 263 0.01
930 19 0.00
931 28 0.00
932 29 0.00
933 78 0.00
934 11 0.00
935 7 0.00
936 5 0.00
937 20 0.00
938 30 0.00
939 19 0.00
940 34 0.00
941 45 0.00
942 21 0.00
943 33 0.00
944 14 0.00
945 21 0.00
946 26 0.00
947 14 0.00
948 21 0.00
949 41 0.00
950 38 0.00
951 29 0.00
952 23 0.00
953 15 0.00
954 11 0.00
955 33 0.00
956 8 0.00
957 21 0.00
958 37 0.00
959 31 0.00
960 87 0.00
961 56 0.00
962 20 0.00
963 31 0.00
964 25 0.00
965 42 0.00
966 31 0.00
967 32 0.00
968 48 0.00
969 25 0.00
970 32 0.00
971 28 0.00
972 22 0.00
973 50 0.00
974 206 0.00
975 80 0.00
976 70 0.00
977 67 0.00
978 209 0.00
979 367 0.01
980 151 0.00
981 107 0.00
982 76 0.00
983 62 0.00
984 66 0.00
985 31 0.00
986 46 0.00
987 42 0.00
988 66 0.00
989 46 0.00
990 49 0.00
991 55 0.00
992 70 0.00
993 40 0.00
994 53 0.00
995 51 0.00
996 43 0.00
997 36 0.00
998 56 0.00
999 60 0.00
1000 46 0.00
1001 38 0.00
1002 52 0.00
1003 77 0.00
1004 61 0.00
1005 76 0.00
1006 69 0.00
1007 123 0.00
1008 84 0.00
1009 53 0.00
1010 69 0.00
1011 85 0.00
1012 57 0.00
1013 87 0.00
1014 97 0.00
1015 63 0.00
1016 75 0.00
1017 89 0.00
1018 133 0.00
1019 71 0.00
1020 61 0.00
1021 61 0.00
1022 45 0.00
1023 38 0.00
1024 451 0.01
1025 335 0.01
1026 407 0.01
1027 780 0.02
1028 1872 0.04
1029 414 0.01
1030 451 0.01
1031 426 0.01
1032 482 0.01
1033 415 0.01
1034 360 0.01
1035 328 0.01
1036 365 0.01
1037 566 0.01
1038 387 0.01
1039 312 0.01
1040 327 0.01
1041 331 0.01
1042 340 0.01
1043 288 0.01
1044 327 0.01
1045 288 0.01
1046 221 0.01
1047 227 0.01
1048 159 0.00
1049 187 0.00
1050 171 0.00
1051 151 0.00
1052 165 0.00
1053 226 0.01
1054 134 0.00
1055 166 0.00
1056 188 0.00
1057 845 0.02
1058 332 0.01
1059 239 0.01
1060 156 0.00
1061 96 0.00
1062 348 0.01
1063 111 0.00
1064 102 0.00
1065 134 0.00
1066 174 0.00
1067 338 0.01
1068 127 0.00
1069 123 0.00
1070 187 0.00
1071 147 0.00
1072 160 0.00
1073 156 0.00
1074 283 0.01
1075 103 0.00
1076 89 0.00
1077 94 0.00
1078 62 0.00
1079 46 0.00
1080 87 0.00
1081 40 0.00
1082 49 0.00
1083 73 0.00
1084 83 0.00
1085 127 0.00
1086 86 0.00
1087 56 0.00
1088 70 0.00
1089 54 0.00
1090 66 0.00
1091 62 0.00
1092 123 0.00
1093 60 0.00
1094 56 0.00
1095 47 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (897 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCCGGCATGTGCTGGTGCCGTATTTTTCTTCTCGGGGCACCATCTCGGAGCATCGTCGGAGAAC
CTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATT
TTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
CCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCA
CGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:19433832 original size:30 final size:30
Alignment explanation
Indices: 19433798--19433860 Score: 126
Period size: 30 Copynumber: 2.1 Consensus size: 30
19433788 GAAATATGAA
19433798 GATGTGCCTAAACCCACCTACCACCCTATC
1 GATGTGCCTAAACCCACCTACCACCCTATC
19433828 GATGTGCCTAAACCCACCTACCACCCTATC
1 GATGTGCCTAAACCCACCTACCACCCTATC
19433858 GAT
1 GAT
19433861 CAACGACTTG
Statistics
Matches: 33, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
30 33 1.00
ACGTcount: A:0.27, C:0.41, G:0.11, T:0.21
Consensus pattern (30 bp):
GATGTGCCTAAACCCACCTACCACCCTATC
Found at i:19436724 original size:26 final size:26
Alignment explanation
Indices: 19436688--19436740 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19436678 GTTGACTTGG
19436688 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19436714 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19436740 G
1 G
19436741 ATCGGATTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19438485 original size:26 final size:26
Alignment explanation
Indices: 19438449--19438501 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19438439 GTTTACTTAG
19438449 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19438475 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19438501 G
1 G
19438502 ATTGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19439388 original size:26 final size:26
Alignment explanation
Indices: 19439351--19439429 Score: 122
Period size: 26 Copynumber: 3.0 Consensus size: 26
19439341 GTTGACTTAG
*
19439351 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
**
19439377 GCATACGGAGTTCATTCATAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19439403 GCATACGGAGTTCGTTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19439429 G
1 G
19439430 AGCGGACCGG
Statistics
Matches: 47, Mismatches: 6, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 47 1.00
ACGTcount: A:0.28, C:0.24, G:0.20, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19441199 original size:26 final size:26
Alignment explanation
Indices: 19441169--19441221 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19441159 GTTGACTTAG
19441169 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19441195 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19441221 G
1 G
19441222 ATTGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19442993 original size:26 final size:26
Alignment explanation
Indices: 19442963--19443012 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
19442953 TTGACTTAGA
19442963 CATACAGAGTTCATTCCCAGTCTAGG
1 CATACAGAGTTCATTCCCAGTCTAGG
* *
19442989 CATACGGAGTTCATTTCCAGTCTA
1 CATACAGAGTTCATTCCCAGTCTA
19443013 AGATCGGACC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.26, C:0.26, G:0.18, T:0.30
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAGTCTAGG
Found at i:19445016 original size:26 final size:26
Alignment explanation
Indices: 19444987--19445039 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19444977 GTCGGCTTAG
*
19444987 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19445013 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19445039 G
1 G
19445040 ATTGGACCAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19445425 original size:890 final size:878
Alignment explanation
Indices: 19444139--19447138 Score: 3445
Period size: 915 Copynumber: 3.4 Consensus size: 878
19444129 GTTGACTTAG
** ** * ** * *
19444139 GCATACGGAGTTCATTCCCAGTCTAAGATCAAACTGGATCGAGGGTTGTGGCAGCACATGCTTGG
1 GCATAC-GAGTTCATTCCCA-TCTAAGATCGGAC-CAACCGAGGGTTACGACAGCACATGCTGGG
* *
19444204 CTCAGGCATGTGCTGGTGTCGCATTTTT-TTCGTCG-GAGCATC---G--TCG--GAGAACCTGA
63 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGA-CATCGGAGCATCGCCGAGAACCTGA
** * * * *
19444260 CCGATAGTATT-GGGTTCCGACGATCTGGGGGCCCGGGGGGGTGTGCGGACATGATGTGCGATGG
127 CCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGG
19444324 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
191 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
* * * *
19444389 TTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTGTAAAATGGGGAC
256 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
*
19444454 ACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
321 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
19444519 CCAAAAAAAATACAAGGATCACGTCTACCAAGTTT-GCCAAAACTCC-TTCTGAAAAAATTTTTA
386 CCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGCCAAAACTCCTTTC-GAAAAAA-TTTTA
* * * **
19444582 AAAAATAC-CGACCCGTAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
449 AAAAAT-CTCGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAT
* * *
19444646 GAAACTTCACGTGAAGGCTTAAGGGACCAATGTATGAATTTTCAAGTCATAAAAATGGCATTGGC
513 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
*** *
19444711 ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCC
578 ACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
*
19444776 CGTCTCTCTAGCAGGAGTAGTG-CCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCACATGGAGTT
643 CGTCTCTCTAGCAGGAGTAGTGCCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATATGGAGTT
* * * * * * * *
19444840 AATTCTCAGTCTAAGATCAGACCAGACCGAAGGCTACAGCAGCAGGATTGGCAGCACGTAGAGGG
708 CATTC-CAGTCTAAGATCAGA-CAGACTGAGGGTTGCGGTAGCAGGATCGGCAGCACGTAGAGGG
*
19444905 GGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCTGGCTGAGCGCCCGCACGTTCAT
771 GGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGTTCAT
*
19444970 TTCAAGGGTCGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 TTCAAGGGTCGGCTTAAGCATACGGAGTTCATTCCCAGTCTAA
* *
19445013 GCATACGGAGTTCATTCCCAATCTAAGATTGGACCAAACCGAGGGTTGTCG-CAGCACATGCTGG
1 GCATAC-GAGTTCATTCCC-ATCTAAGATCGGACC-AACCGAGGGTT-ACGACAGCACATGCTGG
19445077 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGGCATCATCGCCGGAGCATCGCCGAAG
62 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGA-G-A-CAT---CGGAGCATCGCCG-AG
* * * ** **
19445142 AACTTGACTGACGGCATTGGGGTTTCGGTGATCGGAAGGGCCGGGGGGGTGTGCGCACATGATGT
120 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGT
*
19445207 GCGATGGGTGCTGGTACTTGGCCCTTATATTGCCCCCCTATCCCTCATCAAACCTCGAGAACTCA
184 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * * *
19445272 CACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTACAGTTTCTGAAA
249 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAA
* *
19445337 TGGGGACACTTTTTTCAAATAGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
314 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
19445402 ATGCATGCCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGGCCAAAACTCCTTTCGAAAA
379 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT--GGCCAAAACTCCTTTCGAAAA
* * *
19445467 AATTTTAAAAAATCTCGAACCGCAAATAGTTTTGAAAATCATGAAAAATAGAAAATGAGTCGTCT
442 AATTTTAAAAAATCTCGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCT
* *
19445532 TGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGGC
507 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
19445597 ATTGGCACATAGAAATATGAAGATGTACCTAAACCCACCTACCACCCGATCGATCCACGGCTTGC
572 ATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
19445662 GCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCACCCGCCCGCTCATTTCATCGGTTGG
637 GCATCCCGTCTCTCTAGCAGGAGTAGT--------G--C-CCCGCCCGCTCGTTTCATCGGTTGG
* * * *
19445727 CTTAGGCATACGGAGTTCACTCCTAGTCTAAGATCAGACAGATTGAGGGTTGCGGTAGGAGGATC
691 CTTAGGCATATGGAGTTCATTCC-AGTCTAAGATCAGACAGACTGAGGGTTGCGGTAGCAGGATC
* * * *
19445792 GGCAACACGTAGAGGGGGACCCGACCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCAGCTGA
755 GGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGA
** *
19445857 GCACCCGTACGCTCGTTTCGTGGGTTCACTTAGGCATATGGAGTTCATTCCCGG-TCTAAGCATA
820 G----CG--C-C-CG---C--ACGTTCA-TT--TCA-A-GG-G-----T--CGGCT-TAAGCATA
*
19445921 CGGAGTTCATTCCCGGTCTAA
858 CGGAGTTCATTCCCAGTCTAA
* * *
19445942 GCATACAGAGTTCATTCCCAGTCTAAGATCGAATCAGACCGAGGGTTACGACTGCACATGCTGGG
1 GCATAC-GAGTTCATTCCCA-TCTAAGATCGGACCA-ACCGAGGGTTACGACAGCACATGCTGGG
* *
19446007 CTTGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGA-AGCATC--A--A-CG--GAGAACCTGA
63 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGA-CATCGGAGCATCGCCGAGAACCTGA
* *
19446064 CCGACGGTATTGGGGTTCCGACGATCGGGGGGGGCCGGGGGGTGTGCGCACATGATGTGTGATGG
127 CCGACGGCATTGGGGTTCCGACGATC-GGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGG
* *
19446129 GTGCTGGTACTTGGCCCTTATCTTTGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
191 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
*
19446194 TTAAAGAGCCTTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
256 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
*
19446259 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGCGCATG
321 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* * * *
19446324 CCAATAAAAATACAAGGATCACGTCTACTAAGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTAA
386 CCAAAAAAAATACAAGGATCACGTCTACCAAGTTT--GGCCAAAACTCCTTTCGAAAAAATTTTA
** * * *
19446389 AAAAATCTCGAATTGCAAAAAGTTTCGAAAATCATGAAAAATATAAAACAAGTCGTCTTGTCATG
449 AAAAATCTCGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
* * * *
19446454 AAACTTCATGTGAATGG-TTAAAGGACCGTTGTATGAATTTACAAGCCATAAAAAAGGCATTGGC
514 AAACTTCACGTGAA-GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
** * * *
19446518 ACATAGAAATATGAAGATGTGCCTAAACCCACCTACCGTCTTATCGATCCACGTCTTACGCATCC
578 ACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* * *
19446583 CGTCTCTCTGGCCAGTGTAGT-GCCCGCACACCCGCCTGCCCGCTCGTTTCATCGGTCGGCTTAG
643 CGTCTCTCTAG-CAG-G-AGTAG--TG-----CC-CC-GCCCGCTCGTTTCATCGGTTGGCTTAG
* * * *
19446647 GCATATGGAGTTCATTCCCAGTCCAAGATCAAATCGGACTGAGGGTTGTGGTAGCAGGATCGGCA
696 GCATATGGAGTTCATT-CCAGTCTAAGATCAGA-CAGACTGAGGGTTGCGGTAGCAGGATCGGCA
* * *
19446712 GCATGTAGAGGGGGACCC-AGCCGATCCCCGGCTTACGCAT-CTCGCCTCTCTGGCCGGCTGAGC
759 GCACGTAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCT-GCCCCTCTGGCCGGCTGAGC
* * ** * * *
19446775 GCCCGCACGCTCGTTTCGTGGGTTGACTTAAGCATACGGAGTTCATTGCCAG--T--
822 GCCCGCACGTTCATTTCAAGGGTCGGCTTAAGCATACGGAGTTCATTCCCAGTCTAA
* *
19446828 -C-TA--AG---A-T--C--C---GATCGGACC-A---AGGGTTACGATAGCACATTCTGGGCTC
1 GCATACGAGTTCATTCCCATCTAAGATCGGACCAACCGAGGGTTACGACAGCACATGCTGGGCTC
* * *
19446874 GAGCATGTGCTAGTGCCACATTTTTC-T--TC--G---TCGGAGCATCGCCGGAGAACCTGACCG
66 GGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGACATCGGAGCATCGCC-GAGAACCTGACCG
* * *
19446931 ACGGCATTGGGGTTCCGACGATCGGGGGGGCCGAGGGGTGTACGCACATGATGTTCGATGGGTGC
130 ACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
* * *
19446996 TGGTACTTGGCCCTTATATTGGCCTCCTATCGCTCATCAAACCTGGAGAACTCACACCCCCTTAA
195 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
* * * * *
19447061 AGAGCATTTGGGATTTTACAAGTTTGCTACCAGTAGCCATTAAAGTATCCGAAATGGGGACACCT
260 AGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
*
19447126 TTTTGAAATGGTC
325 TTTTCAAATGGTC
19447139 CTAAACCCAC
Statistics
Matches: 1832, Mismatches: 201, Indels: 197
0.82 0.09 0.09
Matches are distributed among these distances:
856 2 0.00
858 1 0.00
860 1 0.00
861 4 0.00
863 170 0.09
864 80 0.04
867 1 0.00
869 7 0.00
872 1 0.00
874 77 0.04
875 10 0.01
877 2 0.00
878 5 0.00
881 3 0.00
884 3 0.00
885 1 0.00
886 3 0.00
888 2 0.00
889 15 0.01
890 284 0.16
891 2 0.00
892 198 0.11
893 18 0.01
894 3 0.00
897 1 0.00
898 2 0.00
900 2 0.00
902 2 0.00
903 83 0.05
904 56 0.03
905 1 0.00
907 2 0.00
908 2 0.00
909 2 0.00
910 2 0.00
911 3 0.00
912 2 0.00
913 1 0.00
914 5 0.00
915 532 0.29
916 97 0.05
917 4 0.00
918 4 0.00
919 3 0.00
920 1 0.00
921 3 0.00
922 1 0.00
923 1 0.00
926 4 0.00
927 1 0.00
928 5 0.00
929 117 0.06
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (878 bp):
GCATACGAGTTCATTCCCATCTAAGATCGGACCAACCGAGGGTTACGACAGCACATGCTGGGCTC
GGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGACATCGGAGCATCGCCGAGAACCTGACCGA
CGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
GAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
AAAAATACAAGGATCACGTCTACCAAGTTTGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATC
TCGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAA
ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
TAGCAGGAGTAGTGCCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATATGGAGTTCATTCCAG
TCTAAGATCAGACAGACTGAGGGTTGCGGTAGCAGGATCGGCAGCACGTAGAGGGGGACCCGACC
GATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGTTCATTTCAAGGGTC
GGCTTAAGCATACGGAGTTCATTCCCAGTCTAA
Found at i:19445926 original size:26 final size:26
Alignment explanation
Indices: 19445890--19445968 Score: 131
Period size: 26 Copynumber: 3.0 Consensus size: 26
19445880 GTTCACTTAG
*
19445890 GCATATGGAGTTCATTCCCGGTCTAA
1 GCATACGGAGTTCATTCCCGGTCTAA
19445916 GCATACGGAGTTCATTCCCGGTCTAA
1 GCATACGGAGTTCATTCCCGGTCTAA
* *
19445942 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCGGTCTAA
19445968 G
1 G
19445969 ATCGAATCAG
Statistics
Matches: 50, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.25, C:0.25, G:0.22, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCGGTCTAA
Found at i:19447439 original size:25 final size:26
Alignment explanation
Indices: 19447405--19447456 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
19447395 GTTGACTTAG
*
19447405 GCATACGGAGTTCATT-CTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19447430 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19447456 G
1 G
19447457 TTTGGACTGC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 16 0.64
26 9 0.36
ACGTcount: A:0.27, C:0.23, G:0.21, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19450097 original size:26 final size:26
Alignment explanation
Indices: 19450061--19450112 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
19450051 TTGACTTAGA
19450061 CATACAGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
* *
19450087 CATACGGAGTTCATTTCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
19450113 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.25, G:0.17, T:0.29
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAGTCTAAG
Found at i:19450358 original size:877 final size:879
Alignment explanation
Indices: 19447301--19462450 Score: 10997
Period size: 894 Copynumber: 17.0 Consensus size: 879
19447291 TTACGGTAAG
* * *
19447301 AGGATCGGTAGCACGTAGAGGGGGACACGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
1 AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * * *
19447366 GACTGAGTGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CTAGTCTAA
66 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19447430 GCATACGGAGTTCATTCCCAGTCTAAGTTTGGACTGCG-CCGAGGGTTGCGGTAGCACATACTGG
131 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCG-GACCGAGGGTTGCGGCAGCACATGCTGG
* * * * * *
19447494 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCTGGGCACGATCATCGGACCATCAG-CGGA
195 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATC-GTCGGA
* * * * * * *
19447558 GAACGTGA-CCAGTGGC-GTTGGGTTTCCGTCGATCGAGGGGGCCGGGAGGGAGGTGTGTGTACA
259 GAACCTGATCGA-CGGCATTTGGG-TTCCGACGATCGAGGGGGCC-GG-GGG-GGTGTGCGCACA
* * *
19447621 TGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAAACTTCGAG
319 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* * *
19447686 AACTCACATCCCCTTAAAGAGCA-TTGAGGTTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGT
384 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* * * *
19447750 TTGAAATAGGGACACATTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAG
449 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * * * *
19447815 CTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG-TTGGGGCAAAAACTCCTTT
514 TTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * *
19447879 C-AAAAAATTTTTAATAATCCTGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAG
579 CGAAAAAATTTTAAAAAATCCCGAACCCT-AAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAG
* *
19447943 TCGTCTTACCATGAAACTTCACGTCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
643 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * * *
19448008 AATGGCATTGGGATGCAGAAATATAAAAATGTGCCTAAACCCACCTACCACCCGATCGATCCACG
708 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * * * * * *
19448073 GCTTGCGCATCCCGTCTCTCTAGTCGGCATAGT----GCCTGCCCGCCCGTCTGCCCACTCGTTT
773 GCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTT
*
19448134 CATCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGAAATGAGGGTTACA
838 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCC----C--AG-T-----C-----------T--A
19448199 GC
878 GC
* * * * * * *
19448201 AGTAGGATCGGCAACACGCATAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCTTC-A
1 ---AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * *
19448265 GTCGGTTGAGCGCCTGCACGCTCGTTTCATGGGCTGACTTAGGCATACGGTGTTCATTCCCAGTC
63 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
19448330 TAAGCATACGGAGTTCATTCCAAGTCGAAGATTGGACCGGACCGAGGGTTGCGGCAGCACATGCT
128 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT
* * * *
19448395 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCATCGTCTGTGCATCGCCGG
193 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGG
* * *
19448460 AGAACCTAATCGGCGGCA-TTGTGGTTCCGATGATCGAGGGGGCCGGGGGGGTGTGCGCACATG-
258 AGAACCTGATCGACGGCATTTG-GGTTCCGACGATCGAGGGGGCCGGGGGGGTGTGCGCACATGA
19448523 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
322 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * *
19448588 TCACACCCCCTTAACGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAGAGTGTCTG
387 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
19448653 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTT
452 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * * *
19448718 TTTGCGCATGCCAACAAAAATACAAGGATCATGTTTACCAAGTTTGGGACCAAAAATCGTTCCGA
517 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * * *
19448783 AAAAATTTTTAAACATCCCGAACCACGAAAAGTTTTGAAAATCGTG-AAAATAGAAAACGAGTCA
582 AAAAATTTTAAAAAATCCCGAACC-CTAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCG
*
19448847 TCTTGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
646 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
*
19448912 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCT
711 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
19448977 TGCGCATCCCGTCTCTCTGGTCGGCGTAGT----GCCCGCCCGCCCACCCGCCCGCTCGTTCCGT
776 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGT
* *
19449038 CGATTGGCTTAGGCATACGGAGTTCATTCTCAGTCTAAGATCAGACC
841 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC-----T-AG--C
* ** *
19449085 AGACCGAGGGTTGCGGTAGCAGGATCAGCAGCACACAGAGGGGGGACCCGGTCGATCCCCAGCTT
1 AG---GA----T-C-G--GCA-G--CA-C-G----TAGA-GGGGGACCCGACCGATCCCCGGCTT
* * * *
19449150 ACGCATCTCGACCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTGGGTTGAC-T-----T-
45 GCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
* *
19449208 ---AG----------G-C---G--TACGGAGTTCATTTCCAGTCTAAGATCGAACCGGACCGAGG
110 CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG
*** * *
19449254 GTTGCGGCAGCACATGCTCACCTCGGGCATGTG-TTGTGTCGCATTTTTCTTCG-CTGGGGCACC
175 GTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACC
* * *
19449317 ATCGTCGGAGCGTCGACGAAGAACCTGA-CTGACGGCA-TTGGTGTTCCGACGATCG-GGGGGCC
239 ATCGTCGGAGCATCGTCGGAGAACCTGATC-GACGGCATTTGG-GTTCCGACGATCGAGGGGGCC
** *
19449379 GGGGGGGTGTGCGCACATGATGTATGATGGGTGCTGGTACTCGGCCCTTATATTGGCCCCCTATC
302 GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
** ** * * **
19449444 GATCATCAAAAATTGAGAACTCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGCCTGCTGCC
367 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
** *
19449509 AGTAGCCATTAAAGTGTCTGAAATGGCAACACTTTTTTCAAATGGTCACAAAATCTTGTATACTT
432 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* *
19449574 CGATTTTTTAGCTGAATGTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
497 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * *
19449639 GGGGCCAAAACTCCTTCCGAAAAAAGTTTAAAAAATCTCAAACCCCTAAAAGTTTCAAAAATCGT
562 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAA-CCCTAAAAGTTTTAAAAATCGT
19449704 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
626 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
*
19449769 AATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTAC
691 AATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
* * * * *
19449834 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTTTCTGGTCGATGTAGTGCCAGCCCACCCGCC
756 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCC
* * * * *
19449899 CGCCGGCCCACTCATTTTGTCGGTTGGCTTAGGCATACGTAGTTCATTCCCAG-C-AGC
821 CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAGC
* * * * *
19449956 AGGATCGGCAGCACGTAGAGGGGGCCCCGACCAATCCCCGTCTTGCACATCTCGCCCCTCTGGCC
1 AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * *
19450021 GACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGACATACAGAGTTCATTCCCAGTCTAA
66 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19450086 GCATACGGAGTTCATTTCCAGTCTAAGATCGGACCGGACCGAGGGCTGCAGTAGCACATGCTAGG
131 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*** * *
19450151 CTCAAACATATGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCGTCGGAGA
196 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* ** * * *
19450216 ACCTGATCGACGGTATTTGGGTTCCGGTGATCGAGGGGGCCGGGGGGGTGTGCACACATAATCTG
261 ACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* * *
19450281 TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCACCAAACCTCGAGAACTCAC
326 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * * * *
19450346 A-CCCCGTAAAGAGCATTTGAGATTGTACAGGTTTCCTGCTAGTAGCCATTAAAGTATCTAAAAT
391 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
19450410 AGGGACACTCTTTTCAAAAGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
456 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
19450475 TGCATGCCAAGAAAAAA-AAAAGGATCACGTCTACCAAGTTTGGGGCCAAAAGTCCTTCCGAAAA
521 TGCATGCCAA-AAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * **
19450539 AATTTTAAAAATTCCCGAACCGCAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGTCT
585 AATTTTAAAAAATCCCGAACC-CTAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19450604 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGTCATAAAAATGGC
649 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * *
19450669 ATTGGCATGCAGAAATATGAATATGTGCCTAAGCCCACCTACCACCCTATTGATCCATGGCTTGC
714 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
19450734 GCATCCCGTCTCTCTGGCCGACGTAAT------------GCCCGCCCGCTCGCTCATTTCGTCAG
779 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGG
19450787 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGGTCAGACCAGACCGAGAGTTACGGC
844 TTGGCTTAGGCATACGGAGTTCATT-CC---C--A-GT----------C------TA--GC
* * * * * *
19450848 AGTAGGATCGGCAGCACATAGAGGGTGAACCGGCCAATCCCCGACTTGCGCATCCCGCCCCTCTG
1 ---AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * *
19450913 GCCGGCTGAGCGCCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACAGAGTTCATTCCCAATC
63 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * *
19450978 TAAGC-TATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACAGAGGTTTACGACAGCACATGCT
128 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT
** ** * **
19451042 GGGCTCGGGCATGTGCTGGTGCCATATTTTTCTTCACCGGGGCACCATCG-CGGGACCATCACCG
193 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTC-GGAGCATCGTCG
* * * * * *
19451106 GAGAACCTGA-CCAGCGGCA-TTGAAGTTTCGGCGATCG-GGGGGCC-GGTGGGTGTACGCACAT
257 GAGAACCTGATCGA-CGGCATTTG-GGTTCCGACGATCGAGGGGGCCGGGGGGGTGTGCGCACAT
* *
19451167 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCTCAAGA
320 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
*
19451232 ACTCACACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
385 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
**
19451297 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAAATGAATT
450 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * *
19451362 TTTTTGTGCATGCCAACAAAAATGCAAGGATCATGTCT---ATGTTTGGGGCCAAAACTCCTTCC
515 TTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
** * *
19451424 GAAAAAATTTTAAAAAATCCCGAACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGT
580 GAAAAAATTTTAAAAAATCCCGAACCCT-AAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGT
* * * *
19451489 CATCTTGCCACGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAA
644 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
19451554 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
709 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
19451619 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGT--------GCCCGCCCGCCCGCCCGCTCGTTTC
774 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTTC
19451676 GTCGGTTGGCTTAGGCATACGGAGTTCATTTCTTGTCTAAGATCAGACCGGACCGAGGGTTGCGA
839 GTCGGTTGGCTTAGGCATACGGAGTTCA---------T----T-----C---CC-A--G-T-C--
* *
19451741 CAGT
876 TAGC
* * * * *
19451745 AGGATCGGCAGCACGTGGAGGAGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCCGGTC
1 AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* *** * ** * * * * * *
19451810 GGCTGAGGGTTGTGGCA-ACAAG-TTCAGT-AG-T-ACATAGAG-TTGGACCGAG-CCAATCCC-
66 GGCTGAGCG--CCCGCACGCTCGTTTC-GTGGGTTGACTTAG-GCAT--ACGGAGTTCATTCCCA
* * *** * * * * * * *
19451867 --CT--GC-T--TGCG--CA-TCCC-G-C--CCCTCTG-CC-CACAGAGCG--CCCGCA-CACTT
125 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACAT
* ** * *** *** **
19451913 GTTTCG-T-GGG--T-TGACT--TAG--GCA---TACGGAGTTC-ATTC-CCA--GTCTAAGCAT
190 GCTGGGCTCGGGCATGTG-CTGGT-GCCGCATTTTTCTTCG-TCGGGGCACCATCGTCGGAGCAT
* ** * * ** * * * * * ****
19451962 --ACGGAGTTCAT--TC--C--CAGTCTAAGATCGGACTGGATCGAGGGTTGCAGCAGCACATGC
252 CGTCGGAGAACCTGATCGACGGCA-TTTGGGTTCCGAC--GATCGAGGG-GGCCG-GGGGGGTG-
* * ** ** ** * * ** * * **
19452019 TGGGCTCGGGCATGTGCTGAT-GCCGCATTTTTCTT----CGTCGA--GG-CACC-ATCGTCGGA
311 TGCGCACATG-ATGTGC-GATGGGTGC-TGGTACTTGGCCCTTATATTGGCCCCCTATC-CCTCA
* * * * ** * ** * *** *
19452075 GC-ATCACTGGAGAACCTGAC-CGGCGGCTT--TG-GGGTTCCGACGATCGGGGGGGACGGGGGG
372 TCAAAC-CTCGAGAA-CTCACAC--CCCCTTAAAGAGCATT-TGA-GAT-----TTTAC-----A
* * ** * * * ** * * **
19452135 GGTGTGC-GCACATGATGTGTGATT--GGTG-CTGGTACT-TTG-CCCTTATATTGGCCCCTATC
421 GGTTTGCTGC-CA-G-T-AGCCATTAAAGTGTCT-GAAATGGGGACACTT-T-TT---TCAAAT-
** * * * * ** *
19452194 CCTCATC-AAACCTTG-AGAAC-TCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTT-TGC
475 GGTCA-CAAAATCTTGTA-CACTTC-GA--GT-TT--TTAGC---TGA-ATTTT----TTTGTGC
* * *** * * ** *
19452255 -TGCTAGTAGCCATTA-AA-G-T---GTCTGA--AA---TGGGG---ACACTTTTTTC----AAA
524 ATGCCA-AAAAAAATACAAGGATCACGTCT-ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * ** * * *** * * ** * *
19452301 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATA
587 T-TTTAAAAAATCCCGAACCCTAAAAG-TTTTA---AAA----ATCGTG-A--AAAATAGAAA-A
* * * * *** * ** ** ** * **
19452366 CAAG--GATCATGTC-T-ACAAGTTTGGGGC-CAAAAAAGGATTTCCGAAAAAATTTTCAAAAAT
639 CGAGTCG-TCTTGCCATGA-AA-CTT----CAC-GTGAAGG-CTTAAGGGACCATTGT-ATGAAT
* * ** ** * *
19452426 CT-CGAA-CCGTAAAAA--GTTTTGAAAAT-CGTGAAAAATAGAAAATGAGTCGTCTTGCCATGA
694 TTAC-AAGCCATAAAAATGGCATTG-GCATGC-AGAAATAT-G--AA-GA-T-G---TGCC-T-A
** * * * ** * * * **** **
19452486 AACTTAACGTGA--AGGCTTAAGGGA-CCATTGTATGAATTTACAAGCCATAAAAATAGCAT-TG
745 AAC-CCACCT-ACCA-CCCT-ATCGATCCA-CG---G--CTTGC--G-CAT-CCCGTCTC-TCTG
* * *** ** ** * **** * *
19452547 GCACATAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATAGATCCAAGGCTTGCGCAT
795 GC-C---G----ACG--TA-GTGCC-CGCCCGCCCGCCCGCCCGCCCGCT-C---G-TTTCG--T
* ** * * * * * **
19452612 CCCGTCT--CTCT-GGCCGACGTAGTGCCTGCCCGCCCGTTCGTTTC
841 -CGGT-TGGCT-TAGGCATACGGAGTTCAT--TC-CCAG-TC-TAGC
* *** * * * * *
19452656 -GTCGATTGGCTTAGGCA--TACG-GAGTTCATTCCAGTCTAAGATCGAATCGGACTGAGGGTTA
1 AG--GATCGGC--A-GCACGTA-GAG-GGGGA--CCCGAC--CGATC----C---C---CGGCT-
* * * * ** * * *
19452717 TGGCAGCAAGAT-CGGCAACACACAGAGGGGGACCTGACCGATCCCTGACTTGCGCATCCCGCCC
44 T-GC-GC---ATCCCGC--CCCTCTG-GCCGG--CTGAGCG--CCC-G-C--ACGC-T--CG--T
* * * * * * * ** * *
19452781 CTC-TGGCCGGCTGAGCGCCCGTATGCTTGTTTCGTGGGTTGGTT--TAGGCATACAGAGTTCAT
88 TTCGT-G--GGTTGA-----CTTAGGC---ATACG-GAGTTCATTCCCAGTC-T--A-AG--CA-
* * * *
19452843 TCCCAGTCTAAGCATACAAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAG
134 T---A--C---G------GAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAG
* *
19452908 CACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACTATCGTCGGAGC
185 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGC
* ** * * ** * *
19452973 ATCGCCGTTGAACCTGA-CGGCGGCATTGGGGTTCCGGTGAGCG-GGGGGCCGGGGGAGTGTGCG
250 ATCGTCGGAGAACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCGGGGGGGTGTGCG
*
19453036 CACATGATGTGCGATGGGTGCCGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
315 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* * * * *
19453101 TGAGAACTCGCACCCCCTTAAAGTGCATTTGAGATTTTACATGTTTGCTGCCAGTAGCCGTTAAA
380 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
*
19453166 GTGCCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
445 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
* * * * * *
19453231 GAATTTTTTTGTCCATCCCAAAAAAAAAGACAAGCATCATGTATACCAAGTTTGGGGCCAAAACT
510 GAATTTTTTTGTGCATGCC-AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* ** * * *
19453296 GCTTCCGAAGTAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
574 CCTTCCGAAAAAATTTTAAAAAATCCCGAACCCT-AAAAGTTTTAAAAATCGTGAAAAATAGAAA
** *
19453361 ACGAGTAATCTTGCCATGAAACTTCACGTAAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
638 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* *
19453426 ATAAAAATGGCATTGACA-GACAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGA
703 ATAAAAATGGCATTGGCATG-CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * *
19453490 TCCACGGCTTGTGCATCCCGTCTCTCTGGCGGACGTA----------G--CTCCCGCCCGCCCGC
767 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGC
* *
19453543 TCATTTCGTCGGTTGGCTTAGTCATACGGAGTTCATTCCCAGTCTAAGATTGACCGGACTGAGGG
832 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT-CC---C--AG--T-------C------
19453608 TTACGGCAGC
876 -T-----AGC
* * ** * *
19453618 AGGATCGGCAGCACGCAGCGGGGGACTTGACCGATCCCCGGCTTGCGCATTCCGCCCCTCTAGCC
1 AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * * *
19453683 GGCTGAGCACCCGCACGTTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
66 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
19453748 GCATATGCAGTTCATTCTCAGTCTAAGATCAGACTGGATCGAGGGTTGTGGCAGCACATGCTGGG
131 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * * **
19453813 CTCAGGCATGTGCTGCTGCCACATTTTTCTTTGCCGGGGCACCATCGCCGAAGCATCACCGGAGA
196 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* *
19453878 ACCTGATCGACGGCATTGGGGTTCCGACGATCG-GGGGGCTGGGGGGTGTGTGC-C-CATGATGT
261 ACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCGGGGGG-GTGTGCGCACATGATGT
* *
19453940 GCGATTGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCA
325 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
19454005 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
390 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
19454070 TAGGGACAC-TTTTTCATATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTT
455 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
19454134 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGCTTGGGACCAAAACTCCTTCAGAAAA
520 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * *
19454199 AA-TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTCAAAAATAGAAAACGAGTCGTCT
585 AATTTTAAAAAATCCCGAACC-CTAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19454263 TGCCATGAAACTTCACGTGAAGTCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGC
649 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * * * *
19454328 ATTGCCAAGAAGAAATATGAAGATGTACCTAAACCCACCTACCACCTTATCGATCCACGGCTTAC
714 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
19454393 GCATCCCGTCTCTCTGTCCGGCGTAGT--------GCCCGCCCACCCGCTCGCTCGTTTCGTCGG
779 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGG
19454450 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA--
844 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAGC
* * * * * ** *** * * * **** ***
19454484 A-GATCAGACCGGAC-T-GAGGGTTGCG-GCAGAAGGATTGGCAGC--ACACAGAGGGGGAC-CT
1 AGGATC-GGCAGCACGTAGAGGG--G-GACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
** * * * *
19454542 GGTCGATCCCCGGAGCGCCCGCACGCTCGTTTCGTGGGTTGGCTTCGGCATACGGAGTTTATTCC
62 GG-C---CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * ** *
19454607 TAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCAAATGTTGCGACAGCAC
123 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCAC
* * * * *
19454672 ATGCTGGGCTCGAGCATATGCTGGTGCCACATTTTTCTTCGTCGGGGTACCATCGTCGGAGCATT
188 ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATC
* * *
19454737 GTCGGAGAACCTGATCGACGGCATTAGGGTTCCGACGATCGGGGGGGCCGGGAAGGGTGTGCGCA
253 GTCGGAGAACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCGGG-GGGGTGTGCGCA
* *
19454802 TAAGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
317 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
*
19454867 AGAACTCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
382 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
*
19454932 GTCTGAAATGGGGAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
447 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
** ** *
19454997 ATTTTTTTGTGCATGCCAAAAAATGTACAAGGATCACGTCTAATATGTTTGGGGCCAAAACT-CT
512 ATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * * *
19455061 TGCCG-AAAAATTTTCAAAAAGTCCCCAACCGCAAAAAG-TTTAGAAAATCATGAAAAATAGAAA
577 T-CCGAAAAAATTTT-AAAAAATCCCGAACC-CTAAAAGTTTTA-AAAATCGTGAAAAATAGAAA
* * *
19455124 ACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTCAACGGACCATTGTATGAATTTACAAGCC
638 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
*
19455189 ATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
703 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * ** *
19455254 CCACGGCTTGTGCATCCTGTCTCTCTAGCCGGTGCAGTGCCCGCCCGCCCG-CCG---GCCCGCT
768 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCT
*
19455315 CGTTTCGTCGGTCGGCTTAGGCATACGGAGTTCATCCCCAGTCTAAGATCAGACCGGACCGAGGG
833 CGTTTCGTCGGTTGGCTTAGGCATACGGAG-T--T---CA---T----T-----C---CC-A--G
19455380 TTGCGCTAGC
874 -T---CTAGC
* * * * * * * *
19455390 AAGATCGGCAGCACGCAGAGGAGGACCCGGCTGATCCCCGACTTGCGCAT-CCGCCTCTCTGGTC
1 AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* ** * *
19455454 GACTGAGCGCCCATAAGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
66 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * * *
19455519 GCATGCGGAGTTCATTCTCATTCTAAGATCGGATCAGACCGTGGGTTGCGGCAACACATGCTAGG
131 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19455584 CTCGGGAATATGGTGGTGCCGCATTTCTCTTCGTCGGGG---CA----C----CATCGTCGGAGA
196 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * **
19455638 ACCTGACCGACGGCATTGGGGTTCCGGTGATCG-GAGGGGCCGGGGGGGTGTGCGCACATGATGT
261 ACCTGATCGACGGCATTTGGGTTCCGACGATCGAG-GGGGCCGGGGGGGTGTGCGCACATGATGT
** *
19455702 GCGATGGGTGCTGGTACTTGGCCCTTATATTCACCCCCTATCCCTCATCAAACCTCAAGAACTCA
325 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
19455767 CACCCCCTTAAAGATCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAA
390 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
19455832 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAAGTTTTTT
455 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* ** * * *
19455897 GTGCATGCCAAAAAAAATACAAGGATCACGTCCACCAAGTTTGGGGTGAAAACGCCTTCTGAAAT
520 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
19455962 ATTTTTAAAAAATCCCGAACCATAAAACGTTTAAAAAATCGTGAAAAATAGAAAATGAGTCGTCT
585 AATTTTAAAAAATCCCGAACCCTAAAA-GTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19456027 TGCCATGAAACTTCACGTGAAGGCCTAAGGGACCATTGTATGAATTTATAAGCCATAAAAATGGC
649 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*** *
19456092 ATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGC
714 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
19456157 GCATCCCGTCTCTCTAGCCGATGTAGTGCCCGCCTGCCCGCCCG--C-CCC-CTCGTTTCGTCGG
779 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGG
19456218 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTCAGATCGACC
844 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCT---A--G--C
* *
19456261 AGACTGAGGGTTACAGCAGCAAGATCGGTAGCACATAGAGGGGGACCCGACCGATCCCCAGCTTG
1 AG---GA----T----C-G---G--C---AGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTG
* * *
19456326 CGCATCCCACCCCTCTGGCCGGCTGAGCGCCTGCACGCTCGTTTCGTGAGTTGACTTAGGCATAC
46 CGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
** * * * *
19456391 AAAGTTCGTTCCCAGTCTAAGCATATGGAGTTCATTCACAGTCTAAGATCGGACCAGACCGAGGG
111 GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGG
* * * **
19456456 TTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCAT
176 TTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAT
** ** * * * * * *
19456521 CACCTTAGCATCGTCGTAGAACCTGACCGTCGGCATTAGGGTTCCGACGATCGGGGGGGCCGAGG
241 CGTCGGAGCATCGTCGGAGAACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCGGGG
*
19456586 GGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
306 GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
* *
19456651 ATCTAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTA
371 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
19456715 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
436 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
* *
19456780 TTTTTAGCTGAATGTTTTTGTGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGG
501 TTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGG
** * * * *
19456845 GTAAAA-TCCTTCCGAAAAAATTTCAAAAAATCCAGAACCGTAAAAAGTTTTGAAAATCGTGAAA
566 CCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCCT-AAAAGTTTTAAAAATCGTGAAA
* * *
19456909 AATATAAAA-GAAGTCGTCTTGCCATGAAACTTCACGTGAAGTCTTAAGGCACCATTGTATGAAT
630 AATAGAAAACG-AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
* *
19456973 TTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACAAC
694 TTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * *
19457038 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTTGTCGACGTAGT--------GCCCG---TC
759 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGC
* * * * **
19457092 CAG-TCGCTCGTTTCATCGGTTGGCTTAGGCTTGTGGAGTTCATTCCCAGTCTAAGATC
824 CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT-AG--C
* * *
19457150 AAACCGGATCGAGGGTTGTGGCAGCTGGATCGGCAACACACAGAAGGGGACCCGATCGATCCCCG
1 --A--GGATC---------GGCAGC---A-C-G-------TAGAGGGGGACCCGACCGATCCCCG
* * * * *
19457215 GCTTGCGCATCCTGCCCCTCTGGCTGGCTGAGCCCCCGCACGTTCGTTTCGTGGGTTGACCTAGG
41 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGG
* * * * * * * *
19457280 CATACGGAGTTCATTGCTAGTCCAAGCGTACGGAGTTCATTCTCAGTCTAAGATTGGATCGGATC
106 CATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
* * *
19457345 GAGGGTTGTC-GCAGCACATGCTGGGCTCGGGCGTTTGCTGATGCCGCATTTTTCTTCGTCGGGG
171 GAGGGTTG-CGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG
* ** * *
19457409 CACCATCGCCGGAGCATCACCGGAGAACCTGATCGGCGGCATTGGGGTTCCGACGATCGAGGGGG
235 CACCATCGTCGGAGCATCGTCGGAGAACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGG
* * *
19457474 CCGAGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCGTTATATTGGCCCCCTA
300 CCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* *
19457539 TCCCTCATCAAACCTCGAGAACTCACACCCCCATAAAGAGCATTTGAGATTTTATAGGTTTGCTG
365 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * *
19457604 CCAATAGCCATTAAAGTGTCTGAAATGGGGATACTTTTTTCAAATAGTCACAAAATCTTGTACAC
430 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * * *
19457669 TTCGAGTTTTTAGTTGAATTTTTTTGAGCATGCCAAAAAAAATACAAGGATCACATCTACCAGGT
495 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
* * *
19457734 TTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATC
560 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCCT-AAAAGTTTTAAAAATC
* * * **
19457799 ATGAAAAATAGAAAACGATTAGTCTTGCCATGAAACTTCACAAGAAGGCTTAAGGGACCATTGTA
624 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* * *
19457864 TGAACTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCA
689 TGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCT
* * * *
19457929 ACCACCCTATCGTTCCACGACTTGCGCATCCCGTCTCTCTGGCCGGCATAGT------------G
754 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG
* *
19457982 CCCGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTA--
819 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAGC
* * * * ** * ** *
19458041 A-GATCAGACTGGAC-CA-AGGGTTACGACAGCACGCAGAGGGGGACCCGAC---CG-ATCCCGC
1 AGGATC-GGCAGCACGTAGAGGGGGAC--CCG-AC-C-GA----TCCCCGGCTTGCGCATCCCGC
* * *
19458099 CCCTCTGGCCGGCTGAGTGCCCGCACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATT
56 CCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
* **
19458164 CCCAGTGTAAG-AT-C-G-G---A---CC-G----A-AT----------CGAGGGTTGCGATAGC
121 CCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGC
* * **
19458203 ACATGCTGGGCT-GGAGCATGTGCTGGTGGCGCATTTTTCTT-TTCGGGGCACCATCACCGGAGC
186 ACATGCTGGGCTCGG-GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGC
* * * * *
19458266 ATCATCGGAGAACCTGACCGGCGGCA-TTGGGTTCCGACGATCGGGGGGGTCGGGGGGGGTGTGC
250 ATCGTCGGAGAACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGG-CCGGGGGGGTGTGC
* ** *
19458330 GCACATGATGTGCGATGGGTACCAGTACGTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACC
314 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
19458394 TTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
379 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
*
19458459 AGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
444 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * * *
19458524 TGAATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACATCAACCAAGTTTAGGGCCAAAAAT
509 TGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * *
19458587 CCTTCC-AGAAAAATTTTAAAAAAACCTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAA
574 CCTTCCGA-AAAAATTTTAAAAAATCCCGAACCCT-AAAAGTTTTAAAAATCGTGAAAAATAGAA
*
19458651 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAGGC
637 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* *** * *
19458716 CATAAAAATGGCACTGGCACATAGAAATATAAAGATGTGCCTAAACTCACCTACCACCCTATCGA
702 CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * *
19458781 TCTACAGCTTGCGTATCCCGTCTTTCTGGCCGACGTAGT--------GCCCGCCCGCCCTCCCGC
767 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGC
* *
19458838 TCGTTTCGTTGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCGAAGATCGGACCTGACC
832 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC-----T---A---G--C
* * * * * * *
19458899 AAGGGTTGCGGTAGTAGGATTGGCAACATGCAAAGGGGACCCGACCGATCCTCGGCTTGTGCATC
1 -A-GGAT-CGGCAGCACG--T------A-G--AGGGGGACCCGACCGATCCCCGGCTTGCGCATC
* * * * * *
19458964 CTGCCCCTCTGGCCGGTTGAGTGCCCGTAGGCTCGTTTCGTGGGATGACTTAGGCATACGGAGTT
52 CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
* * * * * * **
19459029 CAATCCCAGTCTAAGCAAACAGAGTTCATTCCCAGTCTAA-AGTCGGACCAGACTGAGGTTTAAG
117 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA-TCGGACCGGACCGAGGGTTGCG
* * ** *
19459093 GCAGAACATGCTGGGCTTGGGCATGTGCTGGTGCTACATTTTTCTTTG-CTGGGGCACCATCG-C
181 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTC
* * * * ** * * *
19459156 TGGAGCATCGCCAGAGACCCTGACCGGTGGCATTGGGGTTTCGACGATCGAGGGGGTCGGGGGGG
245 -GGAGCATCGTCGGAGAACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCGGGGGGG
* *
19459221 TGTGCACACATGATGTGCGATGGGTGCTGGTACTTGG-CCTTATCTTGGCCCCCTATCCCTCATC
309 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
* *
19459285 AAACCTCGAGAACTCACACCCCCTTAAAAAGCATCTGAGATTTTACAGGTTTGCTGCCAGTAGCC
374 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
*
19459350 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTT
439 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * * * *
19459415 TTAGCTGAATGTTTTTGTGCATGCCAACAAAAATACAAGGATTACATCTACCAAGTTTAGGGCCA
504 TTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* * * **
19459480 AAACTCTTTCCGAAAAAATTTTAAAAAATCCCGAGCCGCAAAAAGTTTCGAAAATCGTGAAAAAT
569 AAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACC-CTAAAAGTTTTAAAAATCGTGAAAAAT
*
19459545 AGAAAACGAATCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
633 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
*
19459610 AAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
698 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * *
19459675 TCGATCCACTGCTTGCGCATCCCGTCTCTCTAGCC-AGCGTAGT----GCCCGCCCGTCCGCCCG
763 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCCCGCCCG
* *
19459735 CCTGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG-
827 CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT-AGC
* *
19459788 ATGAGATCGGACCGAGGGTTGTGGCAGCAAGATCGGTATTACGCATAAGGGGACCCGGCCGATCC
1 A-G-GAT-----C---------GGCAGC---A-C-G---TA-G---AGGGGGACCCGACCGATCC
* * * * * * *
19459853 CCGGCTTGCGCATCCCGCCCCTTTGGCCTGCTGAACGCCTGTACGCTCGTTTCGTGGTTTGTCTT
38 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
* * * * *
19459918 AGGCATACGAAGTTCATTCCCAGCCTAAGCATATGGAGTTCATTCCCAGTCCAAGATCGGATCGG
103 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGG
** * * **
19459983 ACCGAGGGTTGCAACAGCACATGCTGGGCTCGGGCATGTGCTGATGCCGTATTTTTCTTCACCGG
168 ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGG
* * * * * * * *
19460048 GGCACCATCGTCAGAGTATCGTCGGAGAACCTGACCGGCGACATTGGGGTTTCCG-TGATCGGGG
233 GGCACCATCGTCGGAGCATCGTCGGAGAACCTGATCGACGGCATTTGGG-TTCCGACGATCGAGG
* * * * *
19460112 GGGCC-GGGGGGTGTACGAACATGATATGTGATGAGTGCTGGTACTTGGCCCTTATATTGGCCCC
297 GGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* * ** **
19460176 TTATCCCTCATCAAACCTCTAGAACTCACACCCCCTTAAAGAGTGTTTTTCGATTTTACAGGTTT
362 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG-CATTTGAGATTTTACAGGTTT
* * * *
19460241 GCTGCCAGTAGCCATTAAAGTGTCTTAAATGGGTACACTTTTTTGAAATGGTCACAAAATGTTGT
426 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* **
19460306 ACACTTCGAGTTTTTAGCTGAATTTCTTTGTGCATGCCAGCAAAAATACAAGGATCACGTCTACC
491 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACC
* * *
19460371 AAGTTTGGGGCCAAAACTTCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAA
556 AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACC-CTAAAAGTTTTAAA
* * * * *
19460436 AATTGTGACAAATAGAAAAGGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCCT
620 AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
* * *** *
19460501 TGTGTGAATTTACAAGCCATAAAAATGGCATTTGCACATAGAAATATGAAGATGTGCCTAAACCA
685 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCC
* * * **
19460566 ACCTA-CACCCTATCGATCCACGGCTTACGCATCACATCTCTCTGGCCGACGTAAAGCCCGCCCG
750 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG
* * *
19460630 --C-CCC-CTCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATAAGGAGTTCATTCCCAGTCTAAG
815 CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT-AG
19460691 ATC
879 --C
* * * * *
19460694 AGACCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGCCCCAGCTGATCTCCG
1 --A---G---GA----T-C-G--GCA-G--C-AC-GTA-G-AG-GGGGACCCGA-CCGATCCCCG
* * ** * * *
19460759 TCTTGCACATCCCGTGCCTCTTGTCGGCTGAGCGCCCGCACGCTCATTTC--------A--T-GG
41 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGG
* * *
19460813 --T--TGA---CA-T---AG-----GCATACGGAGTTCATTCACAGTCTAAGATTGGACCGGACC
106 CATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
* * * * ** **** ** * **
19460862 GAGGGTTACGGCTGCACATGCTGGTGC-C--ACAT-T--T--TTCTTCATCAGGGCACCATCACC
171 GAGGGTTGCGGCAGCACATGCTGG-GCTCGGGCATGTGCTGGTGCCGCAT-TTTTCTTCGTC-GG
* * * * * *
19460919 GG-AGCATCG-CTGGAGAACTTGATCGGCAGTA--T--TTG--GG--TTTCGG---CGATCGA--
233 GGCACCATCGTC-GGAGCA-TCG-TCGG-AGAACCTGATCGACGGCATTTGGGTTCCGA-CGATC
* * * * * * * * *
19460969 G-GGGGCCGGGGGGTGTGCGCACATAATG-TGCGATG-GGTGCTGGTACTTGGCCCTTATATTGG
293 GAGGGGGCCGGGGGGGTGTGCGCA-CATGAT--G-TGCGATG--GGTGC-TGG----TA-CTTGG
** ** *** * * * * * *** *
19461031 CCC-CCTA-T--CCTTC-ATCAAACCTCGAGAA-CTC-ACACCCCCTTAAAGAGCATT--AGAG-
346 CCCTTATATTGGCCCCCTATCCCTCATC-A-AACCTCGAGA---ACTCACACCCCCTTAAAGAGC
* * * * ***
19461086 ATTTTACAGGTTTGCTGCCA-G-TAGCCATTAAAGT-GCC-TT-AA------G---TGGGGACAC
406 A-TTT-GAGATTT--T-ACAGGTTTG-C-TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
19461137 TTTTTTCAAATGGTCACAAAATCATGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
464 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* * * *
19461202 -AAAAAAATATAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTGCGAAAAATTTTTTAA
529 AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* ** * ** *
19461266 AAATCCTGAACAGCAAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGTCTTGCCAGGA
594 AAATCCCGAAC--CCTAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* ** *
19461331 AACTTCACGTGAAGGCTTAAGGGACCACTGTATGAATTTACAAGTGATAAAAATGGCACTGGCAT
657 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
*
19461396 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCATGCG-AGTCCC
722 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA-TCCC
* * *
19461460 ATCTCTCTGGCCGACGTAGT----GCCCGCCCGCCCGTCCGCCCGCTCG-TTCGTCGATTGGCTT
786 GTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
19461520 AGGCATACGGAGTTCATTCCCAGTCTAAGATTGGGC
851 AGGCATACGGAGTTCATTCCCAGTCT---A----GC
* * * * *
19461556 TGGATCGAGGGTTGTGGCAGAAAAATCTGCAGCATTTAGATGGGGACTCGGCCGATCCCCGGCTT
1 AGGATC---------GGC------A---GCA-C--GTAGAGGGGGACCCGACCGATCCCCGGCTT
* * * * * * * * *
19461621 GCGCATCCCGCCCCTTTGGCCGGCTGAGCACGCACACGTTCGTTCCATGAGTTGACTCAGGCATA
45 GCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
* * * *
19461686 CGGAGTTCGTTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGG
110 CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG
* ** * *
19461751 GTTGCGGTAGCACATGCTAAGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG-CTGAGGTACC
175 GTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACC
* * * * * **
19461815 ATCATCGG-GTCAT-GCCGAAGAACCTGATCGGCGGCA-TGGGGTTCCGGTGATCG-GGGGGCC-
239 ATCGTCGGAG-CATCGTCGGAGAACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCG
* * *
19461875 GGGGGATGTGCACACATGATGTGCGATGGGTGCTCGTACTTGGCCCTTATATTGGCCCCCTATCC
303 GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
*
19461940 CTCATGAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
368 CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
* *
19462005 GTAGCCATTAAAGTGTCT-AGATTGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTT
433 GTAGCCATTAAAGTGTCTGA-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* * * *
19462069 CGAGTTTTTAGCTGAATTTTTTTTTGCATGCCAAGAAAAATACAAGGATCACATCTTCCAAGTTT
497 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * * * **
19462134 TGGGCCAAAACTCCATCCGAAAAAATTTTAAAAAATCTCAAACCGTAAAAAGTTTCCAAAATCGT
562 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCCT-AAAAGTTTTAAAAATCGT
* *
19462199 GAAAAATAAAAAACGAGTCGTATTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
626 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
***
19462264 AATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTAC
691 AATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
* * * * *
19462329 CACCCTATCGATCCACGGCTTGCGCATCCCATCTCTATGGTCGGCGTAGTGCCTGCCCGCCCGCC
756 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCC
* *
19462394 CGCTCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATAT-CCAGTCTA
821 CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT-TCCCAGTCTA
19462451 AGATCGGACC
Statistics
Matches: 11379, Mismatches: 1902, Indels: 1934
0.75 0.13 0.13
Matches are distributed among these distances:
838 1 0.00
839 248 0.02
840 7 0.00
841 174 0.02
842 97 0.01
843 99 0.01
848 1 0.00
849 1 0.00
850 71 0.01
851 5 0.00
853 4 0.00
854 8 0.00
855 18 0.00
856 22 0.00
857 84 0.01
858 292 0.03
859 73 0.01
860 16 0.00
861 32 0.00
862 20 0.00
863 21 0.00
864 24 0.00
865 64 0.01
866 41 0.00
867 231 0.02
868 38 0.00
869 180 0.02
870 191 0.02
871 156 0.01
872 214 0.02
873 17 0.00
874 31 0.00
875 35 0.00
876 494 0.04
877 689 0.06
878 111 0.01
879 12 0.00
880 16 0.00
881 78 0.01
882 16 0.00
883 16 0.00
884 20 0.00
885 76 0.01
886 28 0.00
887 28 0.00
888 23 0.00
889 28 0.00
890 256 0.02
891 266 0.02
892 802 0.07
893 346 0.03
894 829 0.07
895 441 0.04
896 508 0.04
897 60 0.01
898 262 0.02
899 333 0.03
900 216 0.02
901 451 0.04
902 409 0.04
903 809 0.07
904 516 0.05
905 6 0.00
906 22 0.00
907 22 0.00
908 18 0.00
909 3 0.00
910 3 0.00
911 8 0.00
912 12 0.00
913 11 0.00
914 9 0.00
915 8 0.00
916 7 0.00
917 6 0.00
918 7 0.00
922 6 0.00
923 1 0.00
924 3 0.00
925 3 0.00
926 1 0.00
927 9 0.00
928 5 0.00
929 3 0.00
930 1 0.00
931 4 0.00
932 5 0.00
933 6 0.00
934 15 0.00
935 13 0.00
936 4 0.00
937 3 0.00
938 11 0.00
939 8 0.00
940 17 0.00
941 1 0.00
942 6 0.00
943 4 0.00
944 3 0.00
945 3 0.00
946 2 0.00
947 10 0.00
948 1 0.00
949 2 0.00
951 3 0.00
952 1 0.00
953 1 0.00
955 4 0.00
957 5 0.00
958 6 0.00
959 5 0.00
960 4 0.00
961 10 0.00
962 2 0.00
963 4 0.00
967 1 0.00
968 1 0.00
970 2 0.00
971 6 0.00
972 4 0.00
973 1 0.00
975 2 0.00
977 1 0.00
980 5 0.00
981 8 0.00
982 5 0.00
983 1 0.00
984 3 0.00
987 1 0.00
988 2 0.00
989 4 0.00
990 6 0.00
991 16 0.00
992 22 0.00
993 20 0.00
994 10 0.00
995 3 0.00
996 7 0.00
997 24 0.00
998 5 0.00
999 8 0.00
1000 12 0.00
1001 7 0.00
1002 15 0.00
1003 6 0.00
1004 16 0.00
1005 4 0.00
1006 10 0.00
1007 31 0.00
1008 11 0.00
1009 2 0.00
1010 4 0.00
1011 9 0.00
1012 11 0.00
1013 14 0.00
1014 3 0.00
1015 11 0.00
1016 8 0.00
1017 12 0.00
1018 18 0.00
1019 13 0.00
1020 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (879 bp):
AGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
ACCTGATCGACGGCATTTGGGTTCCGACGATCGAGGGGGCCGGGGGGGTGTGCGCACATGATGTG
CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
ATTTTAAAAAATCCCGAACCCTAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTT
GGCTTAGGCATACGGAGTTCATTCCCAGTCTAGC
Found at i:19451968 original size:26 final size:26
Alignment explanation
Indices: 19451932--19451984 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19451922 GTTGACTTAG
19451932 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19451958 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19451984 G
1 G
19451985 ATCGGACTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19452865 original size:26 final size:26
Alignment explanation
Indices: 19452828--19452880 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19452818 GTTGGTTTAG
*
19452828 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
19452854 GCATACAAAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
19452880 G
1 G
19452881 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.26, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACAAAGTTCATTCCCAGTCTAA
Found at i:19453752 original size:26 final size:26
Alignment explanation
Indices: 19453722--19453774 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19453712 GTTGACTTAG
*
19453722 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGCAGTTCATTCCCAGTCTAA
* *
19453748 GCATATGCAGTTCATTCTCAGTCTAA
1 GCATACGCAGTTCATTCCCAGTCTAA
19453774 G
1 G
19453775 ATCAGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGCAGTTCATTCCCAGTCTAA
Found at i:19454618 original size:26 final size:26
Alignment explanation
Indices: 19454589--19454641 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19454579 GTTGGCTTCG
* *
19454589 GCATACGGAGTTTATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19454615 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19454641 G
1 G
19454642 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19455522 original size:26 final size:26
Alignment explanation
Indices: 19455493--19455545 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19455483 GTTGACTTAG
19455493 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* * * *
19455519 GCATGCGGAGTTCATTCTCATTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19455545 G
1 G
19455546 ATCGGATCAG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19460719 original size:903 final size:900
Alignment explanation
Indices: 19458148--19462469 Score: 4339
Period size: 903 Copynumber: 4.8 Consensus size: 900
19458138 GTTGACTTAG
* * * * *
19458148 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGAATCGAGGGTTGCGATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAACAGCACATGCTGGG
* ** **
19458213 CT-GGAGCATGTGCTGGTGGCGCATTTTTCTT-TTCGGGGCACCATCACCGGAGCATCATCGGAG
66 CTCGG-GCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGAGCATCGCCGGAG
* *
19458276 AACCTGACCGGCGGCATT-GGG-TTCCGACGATCGGGGGGGTCGGGGGGGGTGTGCGCACATGAT
130 AACCTGACCGGCGGCATTGGGGTTTCCG-CGATCGGGGGGG-C-CGGGGGGTGTGCGAACATGAT
* ** * *
19458339 GTGCGATGGGTACCAGTACGTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTTGAGAACT
192 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
*
19458403 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
257 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTA
*
19458468 AATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
322 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
19458533 TTTGCATGCCAAAAAAATACAAGGATCACATCAACCAAGTTTAGGGCCAAAAATCCTTCC-AGAA
387 TGTGCATGCCAAAAAAATACAAGGATCACATCTACCAAGTTTAGGGCCAAAACTCCTTCCGA-AA
* * * *
19458597 AAATTTTAAAAAAACCTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTC
451 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
19458662 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAGGCCATAAAAATGG
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * * *
19458727 CACTGGCACATAGAAATATAAAGATGTGCCTAAACTCACCTACCACCCTATCGATCTACAGCTTG
581 CATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * *
19458792 CGTATCCCGTCTTTCTGGCCGACGTAGTGCCCGCCCG--CCCT--CCCGCTCGTTTCGTTGGTTG
646 CGCATCCCATCTCTCTGGCCGACGTAGTGCCCGCCCGCCCCCTCGCCCGCTCGTTTCGTCGGTTG
* * * * * * *
19458853 GCTTAGGCATACAGAGTTCATTCCCAGTCGAAGATCGGACCTGACCAAGGGTTGCGGTAGTAGGA
711 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCAAGA
* * * * * * * * *
19458918 TTGGCAACATGCA-AAGGGGACCCGACCGATCCTCGGCTTGTGCATCCTGCCCCTCTGGCCGGTT
776 TCGGCATCACGCATAAGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTTTGGCCGGCT
** * * * *
19458982 GAGTGCCCGTAGGCTCGTTTCGTGGGATGACTTAGGCATACGGAGTTCAATCCCAGTCTAA
841 GAACGCCCGTACGCTCGTTTCAT-GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19459043 GCAAACAGAGTTCATTCCCAGTCTAA-AGTCGGACCAGACTGA-GGTT-TAAGGCAGAACATGCT
1 GCATACGGAGTTCATTCCCAGTCTAAGA-TCGGACCGGACCGAGGGTTGCAA--CAGCACATGCT
* ** ** * * * *
19459105 GGGCTTGGGCATGTGCTGGTGCTACATTTTTCTTTGCTGGGGCACCATCGCTGGAGCATCGCCAG
63 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGAGCATCGCCGG
* * * *
19459170 AGACCCTGACCGGTGGCATTGGGGTTT-CGACGATCGAGGGGGTCGGGGGGGTGTGC-ACACATG
128 AGAACCTGACCGGCGGCATTGGGGTTTCCG-CGATCG-GGGGGGCCGGGGGGTGTGCGA-ACATG
*
19459233 ATGTGCGATGGGTGCTGGTACTTGG-CCTTATCTTGGCCCCCTATCCCTCATCAAACCTCGAGAA
190 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
* *
19459297 CTCACACCCCCTTAAAAAGCATCTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
255 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* *
19459362 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGT
320 TAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-T
* *
19459427 TTTTGTGCATGCCAACAAAAATACAAGGATTACATCTACCAAGTTTAGGGCCAAAACTCTTTCCG
384 TTTTGTGCATGCCAA-AAAAATACAAGGATCACATCTACCAAGTTTAGGGCCAAAACTCCTTCCG
* *
19459492 AAAAAATTTTAAAAAATCCCGAGCCGCAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAATC
448 AAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTC
19459557 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
513 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
** *
19459622 TGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACTGC
578 TGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * *
19459687 TTGCGCATCCCGTCTCTCTAGCC-AGCGTAGTGCCCGCCCGTCCGCC-CGCCTGCTCGTTTCATC
643 TTGCGCATCCCATCTCTCTGGCCGA-CGTAGTGCCCGCCCG-CCCCCTCGCCCGCTCGTTTCGTC
* *
19459750 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-GAGATCGGACCGAGGGTTGTGGCA
706 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCG-GACCGGACCGAGGGTTGCGGCA
* *
19459814 GCAAGATCGGTATTACGCATAAGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTTTGG
770 GCAAGATCGGCATCACGCATAAGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTTTGG
* * * * * *
19459879 CCTGCTGAACGCCTGTACGCTCGTTTCGTGGTTTGTCTTAGGCATACGAAGTTCATTCCCAGCCT
835 CCGGCTGAACGCCCGTACGCTCGTTTCATGG-TTGACTTAGGCATACGGAGTTCATTCCCAGTCT
19459944 AA
899 AA
* * *
19459946 GCATATGGAGTTCATTCCCAGTCCAAGATCGGATCGGACCGAGGGTTGCAACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAACAGCACATGCTGGG
* * ** * * *
19460011 CTCGGGCATGTGCTGATGCCGTATTTTTCTTCACCGGGGCACCATCGTCAGAGTATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGAGCATCGCCGGAGA
* * * * *
19460076 ACCTGACCGGCGACATTGGGGTTTCCGTGATCGGGGGGGCCGGGGGGTGTACGAACATGATATGT
131 ACCTGACCGGCGGCATTGGGGTTTCCGCGATCGGGGGGGCCGGGGGGTGTGCGAACATGATGTGC
* * *
19460141 GATGAGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCTAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
** **
19460206 CCCCCTTAAAGAGTGTTTTTCGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAAT
261 CCCCCTTAAAGAG-CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAAT
* * *
19460271 GGGTACACTTTTTTGAAATGGTCACAAAATGTTGTACACTTCGAGTTTTTAGCTGAATTTCTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT-TTTG
* * * *
19460336 TGCATGCCAGCAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTCCGAAAAA
389 TGCATGCCA-AAAAAATACAAGGATCACATCTACCAAGTTTAGGGCCAAAACTCCTTCCGAAAAA
* * * * *
19460401 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATTGTGACAAATAGAAAAGGAGTTGTCTT
453 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
19460466 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCCTTGTGTGAATTTACAAGCCATAAAAATGGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * *
19460531 TTTGCACATAGAAATATGAAGATGTGCCTAAACCAACCTA-CACCCTATCGATCCACGGCTTACG
583 TTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* ** *
19460595 CATCACATCTCTCTGGCCGACGTAAAGCCCGCCCGCCCCCTCGCCCGCTCGTTTCATCGGTTGGC
648 CATCCCATCTCTCTGGCCGACGTAGTGCCCGCCCGCCCCCTCGCCCGCTCGTTTCGTCGGTTGGC
* * *
19460660 TTAGGCATAAGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATC
713 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCAAGATC
* * * * * * * * * * ** *
19460725 GACAGCACGCAGAGGGGGCCCCAGCTGATCTCCGTCTTGCACATCCCGTGCCTCTT-GTCGGCTG
778 GGCATCACGCATAAGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCT-TTGGCCGGCTG
* * *
19460789 AGCGCCCGCACGCTCATTTCAT-G--G---T-----T---GA---CA-T---AG-----
842 AACGCCCGTACGCTCGTTTCATGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** *
19460822 GCATACGGAGTTCATTCACAGTCTAAGATTGGACCGGACCGAGGGTTACGGCTGCACATGCTGGT
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAACAGCACATGCTGG-
* * * ** ***** * * * * * * *
19460887 GC-C--ACATTTTTCT--T-CATCAGGGCACCATCACC--GG-AGCATCGCTGGAGAACTTGATC
65 GCTCGGGCA-TGTGCTGGTGCCGCA-TTTTTCTTCACCGGGGCACCATCACCGGAGCA-TCG-CC
* ** ***** * **
19460943 GGCAGTATTTGGGTTTCGGCGATCGAGGG-GGCCG-G---GGGGTGTGCGCACATAATGTGCGAT
126 GG-AGAACCTGACCGGCGGC-ATTG-GGGTTTCCGCGATCGGGG-G-G-GC-C-----G-G-G--
* * *** *** *** * * * * * * * *
19461003 GGGTGCTG-GTACTTGGCCCTTATATTGGCCCCCT-ATCCTT---CATCAAACCTCGAGAACTCA
175 GGGTG-TGCGAACAT-GATGTGCGA-TGG-GTGCTGGTACTTGGCCCTTATA--TTG-G--CCCC
* * * * * ** * *** *** * * ***
19461063 C-A-CCCCCTTAAAGAGCATTAGAGATTTTACA--GGTTTGCTG-CCA-GT-AGCCATTA-A---
231 CTATCCCTCATCAA-A-C-CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
*
19461117 --------AGT-GCC-TT-AA--G-------TGGGGACACTTTTTTCAAATGGTCACAAAATCAT
293 TTGCTGCCAGTAGCCATTAAAGTGTCTTAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
* * *
19461162 GTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAATATAAGGATCACGTCTAC
358 GTACACTTCGAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAAAAAAATACAAGGATCACATCTAC
* * * * * * *
19461227 CAAGTTTGGGGCCAAAACTCCTTGCGAAAAATTTTTTAAAAATCCTGAACAGCAAAAAAGTTTCA
422 CAAGTTTAGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGC-AAAAAGTTTCG
** *
19461292 AAAATTATGAAAAATAGAAAACGAGTCGTCTTGCCAGGAAACTTCACGTGAAGGCTTAAGGGACC
486 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* ** * ***
19461357 ACTGTATGAATTTACAAGTGATAAAAATGGCACTGGCATGCAGAAATATGAAGATGTGCCTAAAC
551 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAAC
*
19461422 CCACCTACCACCCTATCGATCCACGGCATGCG-AGTCCCATCTCTCTGGCCGACGTAGTGCCCGC
616 CCACCTACCACCCTATCGATCCACGGCTTGCGCA-TCCCATCTCTCTGGCCGACGTAGTGCCCGC
* *
19461486 CCG-CCCGTCCGCCCGCTCG-TTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
680 CCGCCCCCT-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * * * * * * *** * * *
19461549 ATTGGGCTGGATCGAGGGTTGTGGCAGAAAAATCTGCAGCATTTAGATGGGGACTCGGCCGATCC
744 ATCGGACCGGACCGAGGGTTGCGGCAGCAAGATCGGCATCACGCATAAGGGGACCCGGCCGATCC
* * *
19461614 CCGGCTTGCGCATCCCGCCCCTTTGGCCGGCTGAGCACGCAC--ACGTTCGTTCCATGAGTTGAC
809 CCGGCTTGCGCATCCCGCCCCTTTGGCCGGCTGA--ACGCCCGTACGCTCGTTTCATG-GTTGAC
* *
19461677 TCAGGCATACGGAGTTCGTTCCCAGTCTAA
871 TTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *** **
19461707 GCATACAGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGTAGCACATGCTAAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAACAGCACATGCTGGG
* * * * * *
19461772 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCTGAGGTACCATCATCGG-GTCAT-GCCGAAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGAG-CATCGCCGGAG
* * *
19461835 AACCTGATCGGCGGCA-TGGGG-TTCCGGTGATC-GGGGGGCCGGGGGATGTGC-ACACATGATG
130 AACCTGACCGGCGGCATTGGGGTTTCC-GCGATCGGGGGGGCCGGGGGGTGTGCGA-ACATGATG
* *
19461896 TGCGATGGGTGCTCGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAAACCTCGAGAACTC
193 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
19461961 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC-TAG
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTA-
* *
19462025 ATTGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAGTTTTTAGCTGAATTTTT
322 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTT
* * * *
19462090 TTTTGCATGCCAAGAAAAATACAAGGATCACATCTTCCAAGTTTTGGGCCAAAACTCCATCCGAA
386 TTGTGCATGCCAA-AAAAATACAAGGATCACATCTACCAAGTTTAGGGCCAAAACTCCTTCCGAA
* * * * *
19462155 AAAATTTTAAAAAATCTCAAACCGTAAAAAGTTTCCAAAATCGTGAAAAATAAAAAACGAGTCGT
450 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGT
*
19462220 ATTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
515 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
19462285 GCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
580 GCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
19462350 GCGCATCCCATCTCTATGGTCGGCGTAGTGCCTGCCCGCCCGCCCGCTCGCCTGCTCGTTTCGTC
645 GCGCATCCCATCTCTCTGGCCGACGTA--G--TGCCCGCCCGCCCCCTCGCCCGCTCGTTTCGTC
*
19462415 GGTTGGCTTAGGCATACGGAGTTCATAT-CCAGTCTAAGATCGGACCGGACTGAGG
706 GGTTGGCTTAGGCATACGGAGTTCAT-TCCCAGTCTAAGATCGGACCGGACCGAGG
19462470 ATTACAGCAG
Statistics
Matches: 2790, Mismatches: 473, Indels: 319
0.78 0.13 0.09
Matches are distributed among these distances:
857 71 0.03
858 323 0.12
859 65 0.02
860 5 0.00
862 1 0.00
865 1 0.00
867 2 0.00
868 2 0.00
869 3 0.00
870 27 0.01
871 9 0.00
872 14 0.01
873 37 0.01
874 17 0.01
875 19 0.01
876 62 0.02
877 4 0.00
878 1 0.00
879 2 0.00
880 3 0.00
881 4 0.00
882 8 0.00
883 10 0.00
884 15 0.01
885 75 0.03
886 14 0.01
887 18 0.01
888 22 0.01
889 6 0.00
890 6 0.00
891 9 0.00
892 1 0.00
893 1 0.00
894 5 0.00
895 80 0.03
896 231 0.08
897 29 0.01
898 266 0.10
899 252 0.09
900 64 0.02
901 4 0.00
902 129 0.05
903 486 0.17
904 384 0.14
905 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (900 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAACAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGAGCATCGCCGGAGA
ACCTGACCGGCGGCATTGGGGTTTCCGCGATCGGGGGGGCCGGGGGGTGTGCGAACATGATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTGTG
CATGCCAAAAAAATACAAGGATCACATCTACCAAGTTTAGGGCCAAAACTCCTTCCGAAAAAATT
TTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
GCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
CCCATCTCTCTGGCCGACGTAGTGCCCGCCCGCCCCCTCGCCCGCTCGTTTCGTCGGTTGGCTTA
GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCAAGATCGGC
ATCACGCATAAGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTTTGGCCGGCTGAACG
CCCGTACGCTCGTTTCATGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:19461710 original size:26 final size:26
Alignment explanation
Indices: 19461681--19461733 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19461671 GTTGACTCAG
* *
19461681 GCATACGGAGTTCGTTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19461707 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19461733 G
1 G
19461734 ATCAGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19463488 original size:13 final size:13
Alignment explanation
Indices: 19463470--19463494 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
19463460 GGGGCCAGGG
19463470 GGTGTGCGCACAT
1 GGTGTGCGCACAT
19463483 GGTGTGCGCACA
1 GGTGTGCGCACA
19463495 GATTTTACAG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.16, C:0.24, G:0.40, T:0.20
Consensus pattern (13 bp):
GGTGTGCGCACAT
Found at i:19464118 original size:26 final size:26
Alignment explanation
Indices: 19464082--19464160 Score: 131
Period size: 26 Copynumber: 3.0 Consensus size: 26
19464072 GTTGACTTAG
*
19464082 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
19464108 GCATACAGAGTTCATTCCTAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19464134 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19464160 G
1 G
19464161 ATCAGACTAG
Statistics
Matches: 48, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.30, C:0.25, G:0.16, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19465948 original size:26 final size:26
Alignment explanation
Indices: 19465918--19465970 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19465908 GTTAACTTAG
19465918 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19465944 GCATACGGAGTTCATTTCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19465970 G
1 G
19465971 ATCAGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19467320 original size:900 final size:896
Alignment explanation
Indices: 19463494--19483655 Score: 20757
Period size: 900 Copynumber: 22.5 Consensus size: 896
19463484 GTGTGCGCAC
* *
19463494 AGATTTTACAGGTTTGCTGCCAGAAGCCATTAAAGTGTCTTAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
19463559 GTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAA-TTTTTTATGCATGCCAAAAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAATACA
* * * * * *
19463623 AGCATCACGTCTACCAAATTTGGGGCCAAAACACCTTCCGAAAAAATTTTAAAAAATCCCAAACC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* ** *
19463688 GTAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
*
19463753 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* * *
19463818 GATGTGCCGAAACCCACCTACTACCCTATCGATCCACTGCTTGCGCATCCCGTCTCTCTGGCCGG
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGG
* * *
19463883 CATAGTGCCCGCCCGCCCGT----TCGTTTCATCGGTTGGCTTAGGCATACGAAGTTCATTCCCA
390 CGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * ** * * * * * * *
19463944 GTCTAAGATCCGA-CTGCACTGAGGGTTGCGGCAACAAGATCGGCATCACACAGAGGGGG-TCCG
455 GTCTAAGATCAGACCAG-ACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
* * *
19464007 GTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCAGCTGAACGCCCGCACGCTCGTTTCGTGG
519 GTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* *
19464072 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCTAATCTAAGCA
584 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAG-A
* * *
19464137 TACGGAGTTCATTCCCAATCTAAGATCAGACTAGACCGAGGGTTACGGCACCACATGCTTGGCTC
648 T-C---G---------AA-C------C---C--GACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * *
19464202 GGGCATTTGCTGGTGCCGTATTTTTCTTCGACAGGGCACCA---TC---G--TCG---GAGAACC
688 GGGCATGTGCTGGTGCCGCATTTTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACC
* * * * *
19464256 TGACCGGCGGCATTGGGGTTTCAGCGATCGGGGGGGCTGGGGCGGCTATACGCACATGATGTGCG
753 TGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGC-GGGG-GGGTGTGCGCACATGATGTGCG
* *
19464321 ATTGGTGCTGGTACTTGGCCCTTATATTGTTCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
816 ATGGGTGCTGGTACTTGGCCCTTATATTG-GCCCCTATCCCTCATCAAACCTCGAGAACTCACA-
19464386 CCCCTTAAAGAGCATTTG
879 CCCCTTAAAGAGCATTTG
*
19464404 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAATTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
** *
19464469 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGTGACCAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA-AAAAAATACA
* ** *
19464534 AGGATCACGTCTACGAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCAAACC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* ** * * *
19464599 -AAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCCTGAAAGTTCACGTGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* * *
19464663 GGCTTAAGGGACCATTGTAAGAATTTACAGGCCATAAAAATGGCATTGGCACT-TAGAAATATGA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA-TGCAGAAATATGA
* * * *
19464727 AGATGTGCCTAAAGCCACTTACCATCCTATCGATCCAC-GACTTGCACATCCCGTCTCTCTGGCC
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAG-CTTGCGCATCCCGTCTCTCTGGCC
* * * *
19464791 GGCGCAGTGCCCGCTCGCCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
388 GGCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* ** * * ** * * * * * *
19464856 TAGTCTAAGATTGGACTAGATCAAGGGTTATAATAGAAAGATCGACAGCATGCAGATGGGGACCC
453 CAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCC
*
19464921 GATCGAT-CCTCGGCTTGCGCATCCCGCCACTCGTTTCGTGGGTTACAGCAGAAAGACTGAGCGC
518 GGTCGATCCCT-GGCTTGCGCATCCCGCC-C-C---TC-T-GG-T----C-G---G-CTGAGCGC
* * * *
19464985 CCGCACGCTCGTTTCGTGGGTTAACTTAGGCATACAGAGTTCATTCCCAGTCCAAG-ATTATAGA
565 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA-TACAGA
* * * * *
19465049 GTTGATTCCCAATCTAATATCGAACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTAGGGCAT
629 GTTCATTCCCAGTCTAAGATCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAT
* * * * * *
19465114 GTGCTGGTGCCGCATTTTTCTTTGTC-GAGGCACCATTGCCGAAGCATCATCAGAGAACCTGACC
694 GTGCTGGTGCCGCATTTTTCTTCGGCAG-GGCACCATCGTCGGAGCATCGTCAGAGAACCTGACC
* * *
19465178 GGCGGCATTGGGTTTCCGGCAATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
758 GGCGGCATTGGGGTTCCGGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
*
19465243 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCTTTA
823 CTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC-TTA
19465308 AAGAGCATTTG
886 AAGAGCATTTG
*
19465319 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* ** * *
19465384 GTCACAAAATCTTGTGCACTTCGAGTTTTTAAATGAATTTTTTTATGCATACCAAAAAAAAATAC
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC--AAAAAAATAC
* ** *
19465449 AAAGATCACGTCTACCAAGTTTGGCTCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTGGAAC
129 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAAC
* *
19465514 CGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * *
19465579 AGGCTTAAGGGACCATTGTATGAATTTACAACCCATAAAAATGGCATTGGCACGCAGAAATATAA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* **
19465644 AGATGTGCCTAAACCCACCTACCACCCTATCGATTCATGGCTTGCGCATCCCGTCTCTCTGGCCG
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
* * * *
19465709 GCGTATTGCCCGCCCGCTCGTCGGCTCGCTCGCTTCGTCGGTTGGCTTAGTCATACGGAGTTCAT
389 GCGTAGTGCCCGCCCGC-C--CGTC-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* ** * * *
19465774 TCCCAGTCTAAGATCGGACC-GAACCGAA-GGTTGTGGCAGCAGGATCGACAGCACGTAGAGGGG
450 TCCCAGTCTAAGATCAGACCAG-ACC-AAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGG
* * * * * * * *
19465837 GACCCGGTCGATCCCCGGCTTACGAATCCTGCCCCTCTGGTCGGTTGAGCGCCTGCACGATTGTT
513 GACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTT
* * * *
19465902 TCATGGGTTAACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTTCCAGTC
578 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTC
* * * * * * * * *
19465967 TAAGATC-AGATCAGACCGAGGGTTACGGCAGCACGT-TTGGGCTCGGGCAAGTGTTGGTGTCGT
643 TAAGATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGC
* * * **
19466030 ATTTTTCTTCAGCGGGGCACCATCGTC---G-A-----A-A-AACCTGACCGACGGCATCAGGGT
707 ATTTTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGT
** * ** * *
19466084 TCCGATGATCGGAGGGGCCAGGGGGTGTGCGCACATGATATGCGATGGGTGCTAGTACTTGGCCC
772 TCCGGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
* *
19466149 TTATATTGGCCCCCTATCCCTCATCAAACCTGGAGAACTCACACCCACTTAAAGAGCATATG
837 TTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCC-CTTAAAGAGCATTTG
**
19466211 AGATTTTACAGGTTTGCTGCCAGTAGCTGTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
19466276 GTCGCAAAATCTTGTACACTTCGAGTTTTTAGCTGAATATTTTTGTGCATGCCAAGAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * *
19466341 ATGG-TCACGTCCACCAAGTTTGGGGCCAAAAATCCTT-TCGAAAAAATTTTAAAAAATCCCGAA
130 A-GGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-GAAAAAATTTTAAAAAATCTCGAA
* * * *
19466404 CCGTAAAAAATTTCAAAAATTATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTG
193 CCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* *
19466469 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATA
258 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATG
* *
19466534 AAGATGTGCCTAAACCCACCTACTACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCA
323 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCC
** * *
19466599 GGTATAGTGCCCGCCTGCCCGTCCGCTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
388 GGCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* ** *
19466664 CAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGACAGCACATAGAGGGGGTCCC
453 CAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCC
* * * * * *
19466729 GGTCGATCCCTGACTTACGCATCCCACTCCTCTGGTCGGTTGAGTGCCCGCACGCTCGTTTCGTG
518 GGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGTG
** * * *
19466794 GGTTGACTTAGGCATACAAAGTTAATTCCCAGTCTAAGCATCCGGAGTTCATTCCCAGTCTAAGA
583 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGA
* * * * *
19466859 TCGAACCCGATCGAGGGTTGCGGCACCCCATGCTGGGCTCGGGCATTTGCTGAG-GCCGTATTTT
648 TCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTG-GTGCCGCATTTT
* * * **
19466923 TCTTCGGAAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGACGGTATTGGGGTTCCAA
712 TCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * *
19466988 CGATCGAGGGGTCGGGGGAGGTGTGTGCACATTGCATGCGCGATGGGTGCTGGT-CATTGGCCCT
777 CGATCGGGGGGGCGGGGG-GGTGTGCGCACA-TG-ATGTGCGATGGGTGCTGGTAC-TTGGCCCT
*
19467052 TATATTGG-CCCTATCCCTCATCAAACCTCAAGAAACTCACACCCCTTAAAGAGCATTTG
838 TATATTGGCCCCTATCCCTCATCAAACCTCGAG-AACTCACACCCCTTAAAGAGCATTTG
*
19467111 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTTC-AAT
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTTCAAAT
* ** * *
19467175 GGTCACAAAATCTTGTGCACTTCGAGTTTTTTAAATGAATTTTTTTATGCATACCAAAAAAATAC
65 GGTCACAAAATCTTGTACACTTCGAG-TTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAATAC
* ** * *
19467240 AAAGATCACGTCTACCAAGTTTGGCTCCAAAACTCCGTCTGAAAAAATTTTAAAAAATCTGGAAC
129 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAAC
* *
19467305 CGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * *
19467370 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGTATGTAGAAATATAA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* *
19467435 AGATGTGCCTAAACCCACCTACTACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCAG
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
** *
19467500 GTATAGTGCCCGCCTGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
389 GCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* * * ** *
19467565 AGTCTAAGATCGGACCAAACCAAGGGTTGCAGTAGCAGGATCGACAGCACATAGAGGGGGTCCCG
454 AGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
* * * * * *
19467630 GTCGATCCCTGACTTACGCATCCCACTCCTCTGGTCGGTTGAGTGCCCGCACGCTCGTTTCGTGG
519 GTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
** * * *
19467695 GTTGACTTAGGCATACAAAGTTAATTCCCAGTCTAAGCATCCGGAGTTCATTCCCAGTCTAAGAT
584 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGAT
* * * * *
19467760 CGAACCCGATCGAGGGTTGCGGCACCCCATGCTGGGCTCGGGCATTTGCTGAG-GCCGTATTTTT
649 CGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTG-GTGCCGCATTTTT
* * * **
19467824 CTTCGGAAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGACGGTATTGGGGTTCCAAC
713 CTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCCGGC
* * * *
19467889 GATCGAGGGGTCGGGGGGAGGTGTGTGCACATGATGCGCGATGGGTGCTGGTACTTGGCCCTTAT
778 GATCGGGGGGGC-GGGGG-GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
19467954 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCTTAAAGAGCATTTG
841 ATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCTTAAAGAGCATTTG
** * *
19468011 AGATTTTACAGGTTTGCTGTTAGTAGCCATTAAATTGTCTGAAATGGGGACATTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
19468076 GTCACCAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCGAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * *
19468141 AGGATCACGTTTACCAAGTTTGGGGCCAAAACTCCTT-TCGAGAAAATTTTGAAAAATCTCGAAC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-GAAAAAATTTTAAAAAATCTCGAAC
** * * * *
19468205 CAAAAAAAGTTTTAAAAATTATAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACCTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* *
19468270 AGGCTTAAGGGACCATTGTAAGAATTTACACGCCATAAAAATGGCATTGGCATGCAGAAATATGA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* * *
19468335 AGATGTGCCTAAACCCACCTACCATCCTATTGATCCACAGCTTGCGCATCCTGTCTCTCTGGCCG
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
* * * * *
19468400 GCGTAGTGCCCGCCCTCCCGCCCGCTTGCTCATTTTGTCGATTGGCTTAGGCATACGGAGTTCAT
389 GCGTAGTGCCCGCCCGCCCG-TC-C--GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
** * * * * *
19468465 TCCCA-TCTAAGATCAGACCAGACTGAGGGTTACAGCAGCAAGATTGGTAGCACGCAGAGGGGGA
450 TCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGA
* * * * *
19468529 CCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCAGGGCGGCTGAGCG-CCGACACGCTCGTTT
515 CCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCG-CACGCTCGTTT
* * * * * * *
19468593 CGTGGGTTGACTTAGGCATACGAAGTTCATTCTCATTCCAAGCATACAGAGTTGATTTCCAATCT
579 CGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCT
* * *
19468658 AAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTAGGGCATGTGCTGGTGCCGCAT
644 AAGATCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCAT
* * *
19468723 TTTTCTTCGTTG-A-GGCACCATTGCCGGAGCATCGTCGGAGAACCTGACC-GCGGCATT-GGGT
709 TTTTCTTCG--GCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGT
* *
19468784 TCC-G-AATCGGGGGGCCGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG-C
772 TCCGGCGATCGGGGGGGC-GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCC
*
19468846 CTTATATTGGCCCCCTATCCCTCATCAAACCTCG-GAACTCACACCCTTTAAAGAGCATTTG
836 CTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCTTAAAGAGCATTTG
* * *
19468907 AGATTTTACAGGTTTGCTGCCAGCAG-CATTAAAGTGTTTAAAATGGGGACACTTTTTTC-AAT-
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
19468969 GTCAC-AAATCTTGTACACTTCGAG-TTTTAGCTGTATTTTTTTGTGCAAGCCAAAAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAATACA
** * ** *
19469032 AGGATCACGTCTACTGAGTTTGAGGTGAAAACTCCTTCGGAAAAAATTTTAAAAAATC-CTGAAC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTC-GAAC
* * *
19469096 TGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* *
19469161 AGGCTTAAGGGACCATTGTATGAATTTACAATCCATAAAAATGGCATTGGCATGCATAAATATGA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* * * * * * * * *
19469226 AGATGTACCTAAACCAACATACCACCCTATCGATCCACGGCTTGCACATCTCATATCTCTGGTCG
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
* * * *
19469291 GCGTAATGCCCGCCTGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTTATTCCT
389 GCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* *** * * *
19469356 AGTCTAAGATCAGACCAAACCAAGGGTTATGGCT-GCTA-GATTGGCAGCATGAAGAGGGGGACC
454 AGTCTAAGATCAGACCAGACCAAGGGTTGCAG-TAGC-AGGATCGGCAGCACGCAGAGGGGGACC
** * * * * * * * *
19469419 CGACCAATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGTTGGGCGCCCGCATGCTCGTTTCAT
517 CGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGT
* * *
19469484 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTCAGCATACGGAGTTCATTCCTAGTCTAAG
582 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAG
** * * * * *
19469549 ATC-AGACTGGACTGAGGGTTGCAGCAGCACATGCTGGGCTCGAGCATGTGCTGGGGCAGCATTT
647 ATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTT
* * * * * * * * * * * *
19469613 TTCCTC-ACCGGTCCACCATTGTCAGAGCATCGCCGGAGAACTTGACCGGTGGCATTAGGGTTCT
711 TTCTTCGGCAGG-GCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCC
19469677 GGCGATCGGGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCT
775 GGCGATCGGGGGGG-CG-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCT
*
19469742 TATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTTACACCCCCTTAAAGAGCATTTG
838 TATATTGGCCCC-TATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
*
19469803 AGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
19469868 GTCACAAAATCTTGTACGCTTCGAGTTTTTAGCTGAATTGTTTTGTGCATTCCAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * ** *
19469933 AGGATCACGTCTACCATGTTAGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* * *
19469998 GTAAAAAGTTTCGAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCAATGGAAAACTTTCACG
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC-AT-G-AAAC-TTCACG
* * * *
19470063 TGAAGGCTTAAGGGGAACCAATTGTTTTTAATTTTACCAGCCATAAAAATGGTATTTGGCATGCA
256 TGAAGGCTTAA-GGG-ACC-ATTG-TATGAA-TTTACAAGCCATAAAAATGGCA-TTGGCATGCA
* *
19470128 -AAATATGAAGATGTGCCTAAACCCACCTACCACACCTATCGATCCACGGCTTACGCATCCCGGT
315 GAAATATGAAGATGTGCCTAAACCCACCTACCAC-CCTATCGATCCACAGCTTGCGCATCCC-GT
* * * * * *
19470192 CTCTCCGGCAGGCATAGTTGCTCGCCCGCCCG-CCTGCTTGTTCCGTCGGTTGGCTTAGGCATAC
378 CTCTCTGGCCGGCGTAG-TGCCCGCCCGCCCGTCC-GCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * * * * *
19470256 AGAGTTCATTCCCAGTCTAAGACCAAACC-GAATCGAGGGTTGCGGTAGCAGGATCGGCAGCATG
441 GGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCAAGGGTTGCAGTAGCAGGATCGGCAGCACG
* * * * * *
19470320 AAGAGGGGGACCCGATCGAT-CCTCGGCTTGTGCATGCTGCCCCTCTGGCCGGCTGAGCGCCCGC
505 CAGAGGGGGACCCGGTCGATCCCT-GGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGC
* * * * *
19470384 ACGCACGTTTCGTGGTTTGACTTAGGCATACGAAGTTCATTCCCAGCCTAAGCATATAGAGTTCA
569 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCA
* * * * ** * *
19470449 TTCCCAGTCTAAGAT-AAGATCAGACCGAAGGTTGCACCAACACATGCTAGGCTCGGGCATGTGC
634 TTCCCAGTCTAAGATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGC
** * * * * * *
19470513 TAGG-GATGCATTTTTCTTTGTCGGGGCACCATCGCCAGAGCATCGTTAGAGAACCTGACCGGCG
698 T-GGTGCCGCATTTTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCG
* * *
19470577 GCATTGGGGTTCCGGGGATCGGGGGGCCGGGGAGGTGTGCGCATATGATGTGCGATGGGTGATGG
762 GCATTGGGGTTCCGGCGATCGGGGGGGCGGGGGGGTGTGCGC-----A----C-A----TGA---
* *
19470642 TGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAAC
810 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAAC
*
19470707 TCACACCCCCTTAAAGAGCATGTG
874 TCACA-CCCCTTAAAGAGCATTTG
* * *
19470731 AGATTTTACAGGTTTGCTACCAGTAGCTATTAAAGTGTCTCAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * **
19470796 GTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAATTTATTTGTGCGCGCCAAAAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAATACA
* * * *
19470861 AGGATCACGTCTACCAAGTTTGGGGACAAAACTCCTTCTGAAAAAATTGTAAAAAATCCCAAACC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* * * *
19470926 GCAAATAGTTTTAAAAATCGTGAAAAATAGGAAACGAGTCGTCTTGCCATG-AACTTCACGTGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
*
19470990 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAACATGAA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* * **
19471055 GATGTGCCTAAACCCACCTACCACCTTATCGATCCACGGCTTGCGCATCCCGTCTCTC-CACCGG
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGG
* * * *
19471119 CGTAGTGCCCGCCCGCCCGACCGCCCGCTAATCTCGTCGGTTGGCTGAGGCATATGGAGTTCATT
390 CGTAGTGCCCGCCCGCCCGTCCGCTCG-T--T-TCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * * * * *
19471184 CCCAATCTAAGATTAGACCAGACGAGGGGTTGTAGCAGGAGGATGGGCAACACGCAGAGGGGGAC
451 CCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGAC
* * ** * * * *
19471249 CCGGTTGATCCCCGGCTTATGCATCCTGCCCCTCTGGTTGGCTGAGCACCCGCACGCTCGTTTTG
516 CCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCG
**
19471314 TGGG-TGACTTAGGCATATAGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAA
581 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAA
* * ** *
19471378 GATC-AGACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCGACCATGTGCTGGTGTCGCATT
646 GATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATT
* * * * *
19471442 TTTCTTTGTCGGGGCACCATCGTCGGAGCATCG-CTAGAGAACCTGGCCGCCGGCATTGGGGTTC
710 TTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTC-AGAGAACCTGACCGGCGGCATTGGGGTTC
* * * * * *
19471506 CAGCGATTGGGGGGGCCCGGGGGGGTGTGTGCACATGATATGCAATGAGTGCTGGTACTTGGCCC
774 CGGCGATCGGGGGGG--CGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
19471571 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCACTTAAAGAGCATTTG
837 TTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCC-CTTAAAGAGCATTTG
* *
19471633 AGATTTTACAGGTTTGCTGCCAGCAGCCTTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
19471698 GTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCACGCCAAGAAAAATAAA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * * * * *
19471763 AGAATCATGTCTACCAATTTTGGGGCCAAAACT-GTTTTCGAAAAAATTTTAAAAAATCCCGAAC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-GAAAAAATTTTAAAAAATCTCGAAC
** * * * * *
19471827 CGCAAAAAGTTTTGAAAATCATGAAAAACAAAAAATGCGACGTCTTGCCATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * *
19471892 AGGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCCTGTAGAAATATGA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* * ***
19471957 AGATGTGCCTAAACGCACCTACCACCCTATCGATCCACAGCTTGCGCATGCCGTCTCTCTGTTAG
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
19472022 GCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
389 GCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* ** * *
19472087 AGTCTAAGATCA-AGCAAGACTGAGGGTTACGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCC
454 AGTCTAAGATCAGA-CCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCC
* * * * *
19472151 GGTCGAACCCCGGCTTGCACATCCTGCCCCTCTGG-CAGGCTGAACGCCCGCACGCTCGTTTCGT
518 GGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTC-GGCTGAGCGCCCGCACGCTCGTTTCGT
* *
19472215 GGGTTGATTTAGGCATACGGAGTTCATTCCCAATCTAAG-AT-C-G-G---------A--C----
582 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAG
* * ** **
19472261 A--G-----GACCGAGGGTTACGGCAACACATGCTGGGCTCAAGCATGTGCTGGCACCGCATTTT
647 ATCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTT
** * * * * *
19472319 TCTTCATCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCAGG
712 TCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCCGG
** * * *
19472384 CGATCGGGGGGGC-GGGGGGTGTGCAAACATGATGTGTGATGGGTGCTGGTACTTGGACCATATA
777 CGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
19472448 TTGGCCCCATATCCCTCATCAAACCTCGAGAACTTACACCCCCTTACAA-AGCATTTG
842 TTGGCCCC-TATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTA-AAGAGCATTTG
* * *
19472505 AGATTTTGCAGGTTTGCTGTCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
19472570 GTCACAAAATCTTGTACGCTTCGAGTTTTTAGCTGAATTTTTTTGTGCATTCCAAAAAAATACAA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAATACAA
* * * * *
19472635 GGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCCGAAAAAATTTTCACAAATC-CTGAACT
131 GGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTC-GAACC
*
19472699 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
*
19472764 GGCTTAAGGGACCATTGTATGAGTTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* * * *
19472829 GATGTGCCTAAACCCACCTATCACCCTATCGATCCA-TGACTTGCGCATCCCATCTCTCTGGCTG
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAG-CTTGCGCATCCCGTCTCTCTGGCCG
* * * *
19472893 GCGTA--G--CG-CC-CAC--CCGCTCATTTCATCGGTTGGCTTAGCCATACGGAGTTCATTCCC
389 GCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* * * *
19472950 AGTCTAACATCAGACC-GAACCAAGGGTTGC-GACAGCAGGATCGACAGCACGCAAAGGGGGACC
454 AGTCTAAGATCAGACCAG-ACCAAGGGTTGCAG-TAGCAGGATCGGCAGCACGCAGAGGGGGACC
* * ** * * * * *
19473013 CGATCGAT-CCTCGGCTTGTGCATCCCGCCCCTCTGCCCGGTTGAGTGACCGTACGC-AGATTTC
517 CGGTCGATCCCT-GGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCG-TTTC
*
19473076 ATGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-T--A-AG---A-T--C-G----
580 GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTA
* * * *
19473121 -GATC--A---GACTGAGGGTTACGACAACACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATT
645 AGATCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATT
* * * * * * *
19473180 TTTCTTCGTCAGGGCACCGTCGTCGGACCATCGTCGGAGAACCTGACCGGTGGCATTCGGGTTCT
710 TTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCC
* ** *
19473245 GACGATCGGGGGGGCTAGGGGGTGTGCGCACATGACGTGCGATGGGTGCTGGTACTTGGCCCTTA
775 GGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
19473310 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
840 TATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
* * *
19473369 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATAGGGACATTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
19473434 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGTGCATGCCAACAAAAATAGA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
*
19473499 AGGATCACGTATACCAAGTTTGGGG-C--AA-T-C--C-----------------A--T------
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* * * * *
19473532 ----AAAGTTTCAAAAATCGTGAAAAATAAAAAATGAGTCGTTTTGCCATGAAACATCACGTGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* *
19473593 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAGGGCATTGGCATGCAAAAATATGAA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* * * * * *
19473658 GATGTGCCTAAACCCAGCTACCACCCTATCGATACAC-GACTTACGCATCCTGTCTCTTTGGCAG
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAG-CTTGCGCATCCCGTCTCTCTGGCCG
* * * *
19473722 GCGTAGTGCCCGCCCATCCGCCCGCCCGCTCATTTCGTTGGTTGGCTTAGGCATACGGAGTTCTT
389 GCGTAGTGCCCG--C--CCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* *** ** * * * *
19473787 TCACAGTCTAAGATC-GAACCAGATTGAGGGTTGTGGCAGCAGGATTGGTAGCACGTAGAGGGGG
450 TCCCAGTCTAAGATCAG-ACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGG
** * * * * * ** *
19473851 ACCC-AACTAATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGATTGAGCGCCCGCACGCTTGTT
514 ACCCGGTC-GATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTT
* * *
19473915 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTCCATTCCCAATC
578 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTC
* * * * * * ** * * *
19473980 TAAGATCGGATCGGACCGAGGGTTACAGCAACACATGCTGGGCTCAAGCATTTGCAGGTGCCGTA
643 TAAGATCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
** * * * ** * * *
19474045 TTTTTCTTCACCGGGGTACCATCGTCAGAGCATCACCGGAGAACCTGACCCGCAGCATTGGGGTT
708 TTTTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTT
* * * *
19474110 CCGGTGAACGGTGGGGC-------TG-G-G-----GGTGTGCGATGGGTGCTGGTACTTGGCCCT
773 CCGGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCT
* * *
19474161 TCTATTGGCCTTCTATCCCTCATCAAACCTCGAGAACTGACACCCCCTTAAAGAGCATTTG
838 TATATTGGCC-CCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
* * *
19474222 AGATTTTACAGGTTTGCTGCCAGTACCCATTAAACTGTCTGAAATGGCGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
19474287 GTCATAAAATCTTGTACACTTCGAGTTTTTA-CATGAA-TTTTTTATGCATGCCAACAAAAATAC
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGC-TGAATTTTTTTGTGCATGCCAA-AAAAATAC
* * * *
19474350 AAGGATCACGTCTACCAAGTTTGGTGCCAAAACTCCTGCCGAAAAAATTTT-AAAAATCCCGAAC
129 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAAC
* ** * *
19474414 CCCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAAC-AGGTCGTCTTGCCATG-ACCTTCACGTG
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA-GTCGTCTTGCCATGAAACTTCACGTG
* * * *
19474477 AAGGCTTAAGGGACCGTTGTATGAATTTTCAAGCCATAAAAATGGCATTGGCACGCA-AAATATA
258 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATG
* * * *
19474541 AAGATGTGCCTAATCCCACCTGCCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
323 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCC
* * * * * ** *
19474606 GGCATAGAGCCCGCCTGCCCGCCCGCCCGCTCGTTTCGTCAGTTAGCTTAGGCATATAGAGCTCA
388 GGCGTAGTG--C-CC-GCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * ** * * *
19474671 TTCCTAGTCTAAGATCAGATCGGACCGAGGGTTGTGGCAGCAGGATCGACAGCATGCAGAGGGGG
449 TTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGG
* * * * * * * * * *
19474736 ACCAGGCCGATCCCCGACTTGCGTATCCTGCCCCTCTAG-CTGGTTGAGCGCCCGTATGCTCGTT
514 ACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTC-GGCTGAGCGCCCGCACGCTCGTT
* * *
19474800 TCATGGGTTGACTTAGGCATACAGAGTTAATTCCCAGTCTAAGCATAC-GAAGTTCATTCCCAGT
578 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAG-AGTTCATTCCCAGT
* * * * * *
19474864 CTAAGATC-AGA-CCGACTGAGGGTTACGACAGCACATGATAGGTTCGGGCATGTGCTGGTGCCG
642 CTAAGATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCG
* * * * * *
19474927 CATTTTTCTTCGTC-GAGGCACCATCGTTGGAGCATCGTC-GAAGAACCTGATCGACAGCATTAG
706 CATTTTTCTTCGGCAG-GGCACCATCGTCGGAGCATCGTCAG-AGAACCTGACCGGCGGCATTGG
* * * *
19474990 GGTTCCGACGATCGGGGGGTCGGGGGGGTGTGCGTACATGATGTGCGATGGGTGCTGGTACATGG
769 GGTTCCGGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
*
19475055 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCACTTAAAGAGCATTTG
834 CCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCC-CTTAAAGAGCATTTG
* *
19475120 AGATTTTATAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
19475185 GTCACAAAATCTTGTACATTTTGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* **
19475250 AGGATCACGTCTACCAGGTTTGGGGCCAAAACTCCTTCCCAAAAAATTTTAAAAAATCTCGAACC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* * *
19475315 GCAAAAAGTTTCACAAATCATGAAAAATAGAAAACTAGTCGTCTTGCCATGAAACTTTACGTGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* ** * *
19475380 GGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTACATTGGCTTGCAGAAATATGAG
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* * * * *
19475445 GATGAGCCTAAACCCACCTACCACCCTATCGATCCTCGGCTTGCGCATCCTGTCTCTCTGGCCGA
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGG
* * * *
19475510 CGTAGTGACCGCCCGTCCGCCCG-CCTGCTCGTTTCGTCGATTGGCTTAGGTAAACGGAGTTCAT
390 CGTAGT----GCCCGCCCGCCCGTCC-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * * * * * * *
19475574 TCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCATGATCGACAGGACGCAGAGGGGCA
450 TCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGA
* *
19475639 CCCGGTCGA----T--C---C-CA----G----ACT--T--GC--A---CCCGTACGCTCGTTTC
515 CCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTC
* *
19475677 GTGGGTTGACTTACGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTA
580 GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTA
* * * * **
19475742 AGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTACTGGTGCCATATT
645 AGATCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATT
* * *
19475807 TTTCTTCGTCGGGGCACCA---TC---G--TCG---GAGAACCTGACCGACGGCATTGGGGTTCC
710 TTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCC
** * * *
19475861 GATGATCAGGGGGGCCGGGGGGGTGTGCGCACATAATGTGCGATGGGTGCTGGTAGTTGGCCCTT
775 GGCGATC-GGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
19475926 ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
839 ATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
* * *
19475986 AGATTTTACAGGTTTGCTGCCCGTAGCCATTAAAGTGTCTGAAATGGGGAAACGTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
19476051 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGTGCATACCAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * * *
19476116 AGGATCACGTCTACCAAGTTT-GGGCCAAAACACCTTCCGAAAAAATTTAAAAAAATCCCGAACC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* * *
19476180 GCAAAAAGTGTAAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
*
19476245 GGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* ** *
19476310 GATGTGCCTAAACCCACCTACTACCCTATCGATCCATGGCTTGTGCATCCCGTCTCTCTGGCCGG
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGG
19476375 CGTAGTGCCCGCCCGCCCG-CTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
390 CGTAGTGCCCGCCCGCCCGTC-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* * * ** * * * * * * *
19476439 AGTCTAAAATCTGACCGGACTGAGGATTAC-GATAGCAAGATTGGCAGCACGTAGAGTGGGACTC
454 AGTCTAAGATCAGACCAGACCAAGGGTTGCAG-TAGCAGGATCGGCAGCACGCAGAGGGGGACCC
* * * *
19476503 GGAT-GATCCCCGGCTTGCGCATCCC-TCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGT
518 GG-TCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGT
*
19476566 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAAGTTCATTGCCAGTCTAA
582 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAG-AGTTCATTCCCAGTCTAA
** * * *
19476630 GATCGAACTAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAAGTCCTGGTGCTGCATTT
646 GATCGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTT
* * * * * * * *
19476695 TTCTTCGCCGGGGCACCATCGTCGAAACCTCGTCGGAGAACCTGATCGGCCGCATTGGGGTTCCG
711 TTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCCG
* * *
19476760 ACGAT--------C--GGGGGTGTGCACACATGATGTGCGATGGGCGCTGGTACTTGGCCCTTAT
776 GCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* *
19476815 TTTGGCCCCCTATCCCTTATCAAACCTTC-AGAACTCACACCCCCTTAAAGAGCATTTG
841 ATTGG-CCCCTATCCCTCATCAAACC-TCGAGAACTCACA-CCCCTTAAAGAGCATTTG
* * *
19476873 AGATTTTACAGGTTTGCTGCCAATAGCTATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * * *
19476938 GTCACAAAGTCTTGTGCACTTCGAGTTTTTAGCTGAATTTTTTTGCGCATCCCAAAAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAATACA
* * * * * ** *
19477003 ACGATCACATCTACCAACTTTGGGGCTAAAAGTCCTTCCAAAAAAATTTTAAAAAATGC-CAAAC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAT-CTCGAAC
* *
19477067 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* *
19477132 ATGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGAAGAAATATGA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* * * *
19477197 AGATGTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCCA
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
* * *
19477262 GCGTAGTGGCCGCCCGCCTGCCTGCTCGCTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCAT
389 GCGTAGTGCCCGCCCGCC--CGT-C-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * * *
19477327 TCCCAGTCTAAGAT-TGAACCAGACCGAGGGTTTTGACAATA--A-GATCGACAGTACGCTGAGG
450 TCCCAGTCTAAGATCAG-ACCAGACCAAGGG--TTG-CAGTAGCAGGATCGGCAGCACGCAGAGG
* * * ** * ** * *
19477388 GGGACCCGGTCGATCCCCGGCTTACGCATTCTACCCCTCTGGCCATCTGAGCGCCCGCTCGCTTG
511 GGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCG
* * * *
19477453 TTTCTTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAAGCATAC-GAAGTTCCTTCCCA
576 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAG-AGTTCATTCCCA
* * * * * *
19477517 GTCTAAGATC-AGACCGGACTGAGAGTTGCGACAGCACTTGCTGGGCTCAGGCATGTGCTGGTGC
640 GTCTAAGATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
* * ** * * * *
19477581 CGCATTTTTCTTCGTCGGGGCACCATCACCAGAGCATCGCCGGGGAACCTGACCGGCGGCA----
704 CGCATTTTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGG
* * * *
19477642 --TT---G-GA-----GGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGCTACCTGG
769 GGTTCCGGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
*
19477696 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGGGCATTTG
834 CCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
* * * **
19477761 AGATTTTATAGGTTTGCTACCAGTAGCGATTAAAGTGTCTGAAATGGGGACTTTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * * * *
19477826 G-CTACGAAATGTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATGCTGACAAAAATAC
66 GTC-ACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC-CAAAAAAATAC
* *
19477890 AAGGATCACGTCTA-AAACGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATAC-CGA
129 AAGGATCACGTCTACCAA-GTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAT-CTCGA
* * *
19477953 ACC-CTAAAAGGTTTCAAAAATCGTGAAAAATAGAAAACTAGTCGTCTTGCCATGAAACTTCACG
192 ACCGC-AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
* *
19478017 TGAATGCTTAAGGGACCATTGTATTAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATA
256 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATA
* * *
19478082 TGAAGATGTTCCCAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CC--CTCTCTGG
321 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGG
* * * * *
19478144 CCGGGGTAGTGCCCGCGCGCCCGCCCGCTTGTTTCGTCGATTGGCTTAGGCATACGGAGTTCATT
386 CCGGCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
** ** ** * * *
19478209 CCCAGTCTAAGATTGGACCAGACTGAGGGTTGTGGCAGCAGGATTGACAGCACGCAGAGGGGGAC
451 CCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGAC
* ** * * * *
19478274 CC-GACAGATCCCCAGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCGCTCACACGCTCGTTTC
516 CCGGTC-GATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTC
* * **
19478338 ATGGGTTGACTCAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTA
580 GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTA
* * * * **
19478403 AGATC-AGACCAGACTGAGGGTTGCGACAGGACATGCTGGGCTCGGGCATGTGCTGGTGCTACAT
645 AGATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCAT
** *
19478467 TTTTCTTCATCAGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC-GCGGCATTGGGGTTC
709 TTTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTC
** ** * * *
19478531 CTACGATCCTGGGGGCCGGGGGGTGTGCACACATGATGTGCGATCGGTGCTGGTACTTGGCCCTT
774 CGGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
*
19478596 ATATTGGCCCCCTATACCTCATCAAACCTCGAGAACTCACACCCCCTTAAGAGAGCATTTG
839 ATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAA-AGAGCATTTG
19478657 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
19478722 GTCACAAAATCTTGTGCACTTCGAGTTTTCAGTTGAATTTTTTTGTGCATGCCAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * *
19478787 AGGATCAGGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAACAATC-CTGAAC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTC-GAAC
* * * * **
19478851 CACAAAAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCTTGAGATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * * * * *
19478916 TGGCTTAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTCGCATGTAGAAATATAA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* * * * *
19478981 AGATGTGCCTAAACCCACCTCCCACACTATCGATCCACGGCTTGCGCATCCCGACTCTGTGGCCG
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
* * * *
19479046 GTGTAGTGCCCACCCG--C--CCGCTCATTTCGTCGGCTGGCTTAGGCATACGGAGTTCATTCCC
389 GCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* * * * * ** * * * *
19479107 AGTCTAAGATCAGATCGGATCGAGGATTGTGGCAGCAAGATCAGTAGCACGCAGAGGGGGACCCG
454 AGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
** * * * *
19479172 ACCAATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTGGTTTCGTGG
519 GTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
*
19479237 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAAGTTCCTTCCCAGTCTAAGA
584 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAG-AGTTCATTCCCAGTCTAAGA
* * * * *
19479301 TC-AGACCGGACTGAGGGTTGCGACAGCACTTGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTT
648 TCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTT
* * * * *
19479365 TCTTCGTCGGGGCACCA---TC---GC--CG---GAGAACCTGACCGACAGCATTGGGGTTCCGA
712 TCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* *
19479419 CGATC-GGGGGGCCGGGGGGTGTGCGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
777 CGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
19479483 TTGGCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
842 TTGGCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
* *
19479539 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTCTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
19479604 GTCACAAAATCTTGTGCACTTCGAGTTTTCAGCTGAATTTTTTTGTGCATGCCAGCAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA-AAAAAATACA
* *
19479669 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAACAATC-CTGAAC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTC-GAAC
* * * * **
19479733 CACAAAAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCTTGAGATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * * *
19479798 TGGCTTAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* * * * * **
19479863 AGATGTGCCTAAACCCACCTCCCACCCTATCGATCCAC-GACTTTCGTATCCCATCTCTTTGGAT
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAG-CTTGCGCATCCCGTCTCTCTGGCC
* * * *
19479927 GACGTAGTACCCGCCTG--C--CCGCTCGTTTCGTCGGTTGGCATAGGCATACGGAGTTCATTCC
388 GGCGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* ** * ** * * *
19479988 CAGTCTAACATCAGACC-GAACTGAGGGTTAC-GATAGCAGGATCAACAACACGGAGAGGGAGAC
453 CAGTCTAAGATCAGACCAG-ACCAAGGGTTGCAG-TAGCAGGATCGGCAGCACGCAGAGGGGGAC
** * * * * *
19480051 CCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCAGCTGAGCGCCCGCACGCTTGTTTCG
516 CCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCG
* *
19480116 TGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
581 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAA
* * * * * *
19480181 CATCGAACCGGATCGAGGGTTGCGGCAGCACATG-TCGAGCTCGAGCATGTGCTGGTGCCGTATT
646 GATCGAACCCGACCGAGGGTTGCGGCAGCACATGCT-GGGCTCGGGCATGTGCTGGTGCCGCATT
* * * *
19480245 TTTCTTCGTCGGGGCACCA---T-----CATCG---GAGAACCTGACCGACGGCA-TGGGGTTTC
710 TTTCTTCGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCC
* *
19480298 GGCGATCGGGGGGGTCGGGGGGGGTGTGTGCACATGTTGTGCGATGGGTGCTGGTACTTGGCCCT
775 GGCGATCGGGGGGG-C-GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCT
* *
19480363 TATATTGGCCCCTTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGGATTTG
838 TATATTGGCCCC-TATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
* * *
19480424 AGATTTTATAGATTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTCAAACG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
*
19480488 GTCACCAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* *
19480553 AGGATCACGTCAACCAAGTTTGGGACCAAAACTCCTTGC-GAAAAAATTTTAAAAAATCTCGAAC
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CTGAAAAAATTTTAAAAAATCTCGAAC
*
19480617 CGAAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
194 CGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
**
19480682 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGA
259 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
* * ** *
19480747 AGATGTGCCTAAACCCACCTACTAACCTATCGATCCATGGCATGCGCATCCCGTCTCTCTGGCCG
324 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
* * * * * * *
19480812 GCATAGTGCCCACACACCCGCCCGGCCACTCATTTCATCGGTTGGCTTAGGCATATGGAGTTCAT
389 GCGTAGTG--C-C-CGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * * * * * * * * **
19480877 TCCTAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGTAGGATCGACAGCACGTAGAGTGACA
450 TCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGA
* * * * * * * **
19480942 CCC-GACTGATCCCCGACTTACGCATCCCACCCCTCTAGTCGGTTGAGC-CCCGCACGCTCGGAT
515 CCCGGTC-GATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTT
* * * * * * * ** ** ** *
19481005 CGAGGG-GGAC-TCGATCGATCCTTGG-CTTGCGCTTCCCACCCCTTTGGCAGGCTA-AG--C-G
579 CGTGGGTTGACTTAG-GC-ATAC--GGAGTT-C-ATTCCCA-GTC-TAAGCATAC-AGAGTTCAT
* ** * ** ***** ** ** * **
19481063 CCCGCACACTCATTTCGTGGGTTGACTTAGGCATACGG-AGTTCATTCCCA-GACTAAGCATAC-
635 TCC-CAGTCTAAGATCG-AACCCGACCGAGGGTTGCGGCAG--CA----CATG-CTGGGC-T-CG
* * * * **** * * *
19481125 GG-A-GTTCT--TTCCCCAGTCTAAGATC-GAACCGG-ACCGAGGGTTGT-GGCAGCACATGCTT
689 GGCATGTGCTGGTGCCGCA-TTTTTCTTCGGCA-GGGCACC-A---TCGTCGG-AG--CAT-C--
* ** * ** **** * * *** ** ** ****
19481183 GGCTCAG-GCATGTG-CTGGTGCCACATTTTTCTTCATCGGGGCACCAACGCCGAAGCATCGTCG
742 -G-TCAGAGAACCTGAC-CG-GCGGCATTGGGGTTC--CGGCG-ATCGGGGGGGCGGGGGGGT-G
* * * * * * ** *** *** *
19481246 -GAGAACCTAACAG-GCGTCATTGGGGTTCTGACG-ATCGGGGGGGCCGGGGAGGGGTGTGCACA
799 TGCGCACATGA-TGTGCG--A-T-GGGTGCTG--GTA-C---TTGGCC-CTTA-TATTG-GC-CC
** * *** * ** * ***
19481308 C-AT-GAT-GTGCAATGGGTTCTG-GTACT--CGGCCCTTATATTG-GCCCCCT-
849 CTATCCCTCAT-CAA--ACCTC-GAGAACTCACACCCCTTA-A-AGAG-CATTTG
**** * * * * * * * * * * *** * *
19481355 ATCCCTCATCAAAGCTTG-AGAACTCA-CACCCCCTTAAAGAGCATTTGAGAT-TTTATAGGTTT
1 AGATTTTA-C-AGGTTTGCTG--C-CAGTA-GCCATTAAAGTG--TCTGAAATGGGGACA-CTTT
* * * * * * ** * ** ** * *** *
19481417 GCTGCCAGTAGCCATTAAAGC--GT---CTT--A---AAT-GGGGACACTTTTTT-CAAATGGTC
57 -TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA-ATTTTTTTGTGCAT-GCC
* ** * * * * * *
19481470 -ACAAAAT-CTTGTA-CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCACGCCAACAAAAATACA
119 AAAAAAATACAAGGATCA---C--G--TCTA-C-CAA---GTTTG-G---GGC--CAAAACT-C-
* ** ** * *
19481532 AGCATCACGTCTACCAATTTTGGGGCCAAAACTCCTTCCCAAAAAATTTTAAAAAATCCTGAACC
164 --C-T-TC-TGAAAAAATTTT-----AAAAAAT-C-T--C--------------------GAACC
* *
19481597 GCAAAAAGTTTCAAAAATCTTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* *
19481662 AGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* * * *
19481727 GATGTACCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGT
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGG
* *
19481792 C-TAGTGCCCGCCCGCCCGCCCACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
390 CGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* *** * * * *
19481856 GTCTAAGATCAGACCGGATTGAGGGTTACGGTAGTAGGATTGGCAGCACGCAGAGGGGGACCCGG
455 GTCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGG
* * * * * * ** * *
19481921 CCGATCCCCGACTTGTGCATCCTGCCCTTCTGG-CTTACTGAGCGCCCGTACGCTCATTTCGTGG
520 TCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTC-GGCTGAGCGCCCGCACGCTCGTTTCGTGG
** *
19481985 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATT-CCATTCTAAGAT
584 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGAT
* * * * * *
19482049 CGGACCAGACCGAAGGTTGTGACAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTC
649 CGAACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC
* * ** * *
19482114 TTC-GCTGGGGCACCAACGTCGGAGCATCGTTGGAGAACCTGACCGGCGGCATTGGGGTTTCGGT
714 TTCGGC-AGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCCGGC
* * * * ***
19482178 GATCGGGGGGCCCGGGGGGTGTGCGCACATGATATGCAAT-GGTGCTCACACTTGGCCCTTATAT
778 GATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* * *
19482242 TGGCCCCTTATCCCTTATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCCTTTT
843 TGGCCCC-TATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
*
19482298 AGATTTTACAGGTTTGCTGCCAGTAGTCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
*
19482363 GTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * ** * * *
19482428 AGGATCACATCTACCAAGTTTGGCGCCAAAACTTTTTCCGAAAAAATTTTAAAAAATCCCGAACA
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACC
* * * *
19482493 GCAAAAAGTTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATAAAACTTCACATGAA
195 GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
*
19482558 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
260 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* **
19482623 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCGTGTCTCTCTGGCCGG
325 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGG
** * * * *
19482688 CGTAGTGCCCAACCGCCCGCCCGCTCGTTTTGTCAGTTGGCTTAGGCATACAGAGTTCATTCCCA
390 CGTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * * * *
19482753 GTCTAACATCGGACC-GAACTGAA-TGTTACAATAGCAGGATCGGCAGCACGCAGAGGGGGACCC
455 GTCTAAGATCAGACCAG-AC-CAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCC
** * ** * *
19482816 GACCGATCCCCGGCTTGCGCATCCCGTGCCTCTGGCCGGTTGAGCGCCCGCACGCTCGTTTCGTG
518 GGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGTG
* * *
19482881 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTCAGCATA-GGAAGTTCATCCCCAGTCTAAG
583 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAG-AGTTCATTCCCAGTCTAAG
* * *
19482945 ATC-AGACCAGACCGAGGGTTGCGGCAGCACATGTTGGGCTCGGGCATGTGCTGGTGTCGCA-TT
647 ATCGA-ACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTT
* * * *
19483008 TTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CTGGAGAACCTGACCGGCGGCATAGGGGTTCC
711 TTCTTCGGCAGGGCACCATCGTCGGAGCATCGTC-AGAGAACCTGACCGGCGGCATTGGGGTTCC
* * * * *
19483072 GACGATCGAGGGGGCCGGGGGGAGTGCGAACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
775 GGCGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* *
19483137 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACGCACACCCCTTTAAAGCGCATTTG
840 TATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC-TTAAAGAGCATTTG
*
19483196 AGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
1 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
*
19483261 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACA
66 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACA
* * *
19483326 GGGATCTCGTCTACCAAGTTTGGGGCCAAAACTCCTTC-CAAAAAAGTTTTAAAAAATC-CTGAA
130 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA-TTTTAAAAAATCTC-GAA
* * ** * * *
19483389 CCGTAAAAATTTTCAAAAATTGTGAAAAAAAGAAAACGAGCCGTCTTTCCATGAAACTTCACGTG
193 CCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
*
19483454 AAGGCTTAAGGGACCATTG--T--A--T-C-A---ATTAAAA--GC-----CAT-----AA-AT-
258 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATG
* * *
19483494 ---ATGTGCCTAAACCCACCTACCACCCTATCGAACCACAGCTTGCGCTTCCCGTCTCTCTGGCT
323 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCC
* *
19483556 GGGGTAGTGCCCACCCGTCCGCCCG-CCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
388 GGCGTAGTG----CCCGCCCGCCCGTCC-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
* *
19483620 ATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGC
448 ATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGC
19483656 GGCAGCACAT
Statistics
Matches: 16389, Mismatches: 2166, Indels: 1430
0.82 0.11 0.07
Matches are distributed among these distances:
829 177 0.01
831 1 0.00
833 2 0.00
838 2 0.00
839 2 0.00
840 3 0.00
841 166 0.01
842 5 0.00
843 1 0.00
846 1 0.00
847 1 0.00
850 2 0.00
852 51 0.00
853 178 0.01
854 1 0.00
855 2 0.00
856 2 0.00
857 1 0.00
858 4 0.00
859 2 0.00
860 3 0.00
861 106 0.01
862 13 0.00
863 285 0.02
864 207 0.01
865 291 0.02
866 250 0.02
867 114 0.01
868 3 0.00
869 1 0.00
870 68 0.00
871 242 0.01
872 200 0.01
873 11 0.00
874 72 0.00
875 200 0.01
876 65 0.00
877 1 0.00
878 4 0.00
879 3 0.00
880 13 0.00
881 305 0.02
882 700 0.04
883 49 0.00
884 535 0.03
885 418 0.03
886 74 0.00
887 709 0.04
888 970 0.06
889 20 0.00
890 23 0.00
891 557 0.03
892 506 0.03
893 252 0.02
894 55 0.00
895 433 0.03
896 626 0.04
897 394 0.02
898 622 0.04
899 235 0.01
900 1356 0.08
901 331 0.02
902 510 0.03
903 423 0.03
904 177 0.01
905 24 0.00
906 67 0.00
907 3 0.00
908 5 0.00
909 8 0.00
910 337 0.02
911 131 0.01
912 22 0.00
913 315 0.02
914 109 0.01
915 240 0.01
916 83 0.01
917 436 0.03
918 191 0.01
919 26 0.00
920 19 0.00
921 123 0.01
922 15 0.00
923 22 0.00
924 4 0.00
925 19 0.00
926 6 0.00
927 12 0.00
928 302 0.02
929 16 0.00
930 13 0.00
931 15 0.00
932 96 0.01
933 13 0.00
934 10 0.00
935 11 0.00
936 13 0.00
937 22 0.00
938 11 0.00
939 20 0.00
940 5 0.00
941 20 0.00
942 11 0.00
943 21 0.00
944 12 0.00
946 10 0.00
947 9 0.00
948 8 0.00
949 8 0.00
950 9 0.00
951 1 0.00
952 1 0.00
953 1 0.00
954 14 0.00
955 9 0.00
956 1 0.00
957 11 0.00
958 6 0.00
959 2 0.00
961 1 0.00
962 3 0.00
963 1 0.00
964 7 0.00
965 9 0.00
966 5 0.00
967 8 0.00
968 8 0.00
969 2 0.00
970 14 0.00
971 11 0.00
972 8 0.00
973 4 0.00
974 133 0.01
975 22 0.00
976 5 0.00
977 2 0.00
978 5 0.00
979 187 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (896 bp):
AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAATACAA
GGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCG
CAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAG
ATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGGC
GTAGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
TCTAAGATCAGACCAGACCAAGGGTTGCAGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGT
CGATCCCTGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCG
AACCCGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
CGGCAGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGAT
CGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCTTAAAGAGCATTTG
Found at i:19469526 original size:26 final size:26
Alignment explanation
Indices: 19469496--19469545 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
19469486 GTTGACTTAG
19469496 GCATACGGAGTTCATTCCCAGTCTCA
1 GCATACGGAGTTCATTCCCAGTCTCA
*
19469522 GCATACGGAGTTCATTCCTAGTCT
1 GCATACGGAGTTCATTCCCAGTCT
19469546 AAGATCAGAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.22, C:0.28, G:0.20, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTCA
Found at i:19470650 original size:17 final size:17
Alignment explanation
Indices: 19470625--19470659 Score: 52
Period size: 17 Copynumber: 2.1 Consensus size: 17
19470615 GCGCATATGA
19470625 TGTGCGATGGGTGATGG
1 TGTGCGATGGGTGATGG
* *
19470642 TGTGTGATGGGTGCTGG
1 TGTGCGATGGGTGATGG
19470659 T
1 T
19470660 ACTTGGCCCT
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
17 16 1.00
ACGTcount: A:0.09, C:0.06, G:0.51, T:0.34
Consensus pattern (17 bp):
TGTGCGATGGGTGATGG
Found at i:19471362 original size:26 final size:26
Alignment explanation
Indices: 19471326--19471378 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19471316 GGTGACTTAG
*
19471326 GCATATAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19471352 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19471378 G
1 G
19471379 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19473967 original size:26 final size:26
Alignment explanation
Indices: 19473931--19473983 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19473921 GTTGACTTAG
* *
19473931 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTCCATTCCCAATCTAA
19473957 GCATACGGAGTCCATTCCCAATCTAA
1 GCATACGGAGTCCATTCCCAATCTAA
19473983 G
1 G
19473984 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.28, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTCCATTCCCAATCTAA
Found at i:19474853 original size:26 final size:26
Alignment explanation
Indices: 19474816--19474868 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
19474806 GTTGACTTAG
19474816 GCATACAGAGTTAATTCCCAGTCTAA
1 GCATACAGAGTTAATTCCCAGTCTAA
*
19474842 GCATAC-GAAGTTCATTCCCAGTCTAA
1 GCATACAG-AGTTAATTCCCAGTCTAA
19474868 G
1 G
19474869 ATCAGACCGA
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.32, C:0.25, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTAATTCCCAGTCTAA
Found at i:19475532 original size:898 final size:898
Alignment explanation
Indices: 19473532--19483662 Score: 11633
Period size: 896 Copynumber: 11.3 Consensus size: 898
19473522 GGCAATCCAT
* * * *
19473532 AAAGTTTCAAAAATCGTGAAAAATAAAAAATGAGTCGTTTTGCCATGAAACATCACGTGAAGGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
* *
19473597 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAAGGGCATTGGCATGCAAAAATATGAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * * * * * *
19473662 TGCCTAAACCCAGCTACCACCCTATCGATACACGACTTACGCATCCTGTCTCTTTGGCAGGCGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * * *
19473727 GTGCCCGCCCATCCGCCCGCCCGCTCATTTCGTTGGTTGGCTTAGGCATACGGAGTTCTTTCACA
196 GTGCCCG--C--CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * * ** * *
19473792 GTCTAAGATC-GAACCAGATTGAGGGTTGTGGCAGCAGGATTGGTAGCACGTAGAGGGGGACCCA
257 GTCTAAGATCAG-ACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCG
** * ** *
19473856 ACTAATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGATTGAGCGCCCGCACGCTTGTTTCGTGG
321 ACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* * *
19473921 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTCCATTCCCAATCTAAGAT
386 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGAT
* * * * * ** * * *
19473986 CGGATCGGACCGAGGGTTAC-AGCAACACATGCTGGGCTCAAGCATTTGCAGGTGCCGTATTTTT
451 CAGACCAGACCGAGGGTTGCGA-CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTT
** * * ** *
19474050 CTTCACCGGGGTACCATCGTCAGAGCATCACCGGAGAACCTGACCCG-CAGCATTGGGGTTCCG-
515 CTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGA-CCGACGGCATTGGGGTTCCGA
*** * * *
19474113 -G-T-GAACGGT---GGGGCTG-G-G-----GGTGTGCGATGGGTGCTGGTACTTGGCCCTTCTA
579 CGATCGGGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
** *
19474165 TTGGCCTTCTATCCCTCATCAAACCTCGAGAACTGACACCCCCTTAAAGAGCATTTGAGATTTTA
644 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * * *
19474230 CAGGTTTGCTGCCAGTACCCATTAAACTGTCTGAAATGGCGACACTTTTTTCAAATGGTCATAAA
709 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
*
19474295 ATCTTGTACACTTCGAGTTTTTA-CATGAA-TTTTTTATGCATGCCAACAAAAATACAAGGATCA
774 ATCTTGTACACTTCGAGTTTTTAGC-TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * *
19474358 CGTCTACCAAGTTTGGTGCCAAAACTCCTGCCGAAAAAATTTT-AAAAATCCCGAACCCCAA
838 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGCAA
** *
19474419 AAAGTTTTGAAAATCGTGAAAAATAGAAAAC-AGGTCGTCTTGCCATG-ACCTTCACGTGAAGGC
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGA-GTCGTCTTGCCATGAAACTTCACGTGAAGGC
* * * *
19474482 TTAAGGGACCGTTGTATGAATTTTCAAGCCATAAAAATGGCATTGGCACGCA-AAATATAAAGAT
65 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
* * * *
19474546 GTGCCTAATCCCACCTGCCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCAT
130 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGT
* * * ** * *
19474611 AGAGCCCGCCTGCCCGCCCGCCCGCTCGTTTCGTCAGTTAGCTTAGGCATATAGAGCTCATTCCT
195 AGTG--C-CC-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* * * * *
19474676 AGTCTAAGATCAGATCGGACCGAGGGTTGTGGCAGCAGGATCGACAGCATGCAGAGGGGGACCAG
256 AGTCTAAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCG
* * * * * * * * *
19474741 GCCGATCCCCGACTTGCGTATCCTGCCCCTCTAGCTGGTTGAGCGCCCGTATGCTCGTTTCATGG
321 ACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* *
19474806 GTTGACTTAGGCATACAGAGTTAATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGAT
386 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGAT
* * * * *
19474871 CAGACC-GACTGAGGGTTACGACAGCACATGATAGGTTCGGGCATGTGCTGGTGCCGCATTTTTC
451 CAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC
* * * * * *
19474935 TTCGTCGAGGCACCATCGTTGGAGCATCGTCGAAGAACCTGATCGACAGCATTAGGGTTCCGACG
516 TTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACG
* * *
19475000 ATCGGGGGGTCGGGGGGGTGTGCGTACATGATGTGCGATGGGTGCTGGTACATGGCCCTTATATT
581 ATCGGGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
* * *
19475065 GGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCACTTAAAGAGCATTTGAGATTTTATA
646 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
*
19475130 GGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
711 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
* * *
19475195 CTTGTACATTTTGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGT
776 CTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGT
* *
19475260 CTACCAGGTTTGGGGCCAAAACTCCTTCCCAAAAAATTTTAAAAAATCTCGAACCGCAA
841 CTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGCAA
* * * * *
19475319 AAAGTTTCACAAATCATGAAAAATAGAAAACTAGTCGTCTTGCCATGAAACTTTACGTGAAGGTT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
** * *
19475384 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTACATTGGCTTGCAGAAATATGAGGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * * *
19475449 AGCCTAAACCCACCTACCACCCTATCGATCCTCGGCTTGCGCATCCTGTCTCTCTGGCCGACGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * * * *
19475514 GTGACCGCCCGTCCGCCCGCCTGCTCGTTTCGTCGATTGGCTTAGGTAAACGGAGTTCATTCCCA
196 GT----GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * * * *
19475579 GTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCATGATCGACAGGACGCAGAGGGGCACCCG-
257 GTCTAAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA
* * *
19475643 --G-T---CGA--T---C--CCAG--ACT-T-----GC--A---CCCGTACGCTCGTTTCGTGGG
322 CCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* *
19475682 TTGACTTACGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
387 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC
* * * * * **
19475747 GGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTACTGGTGCCATATTTTTCT
452 AGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
*
19475812 TCGTCGGGG---CA----C----CATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGATGA
517 TCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGA
* *
19475866 TCAGGGGGG-CCGGGGGGGTGTGCGCACATAATGTGCGATGGGTGCTGGTAGTTGGCCCTTATAT
582 TC-GGGGGGTCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
19475930 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
645 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* * *
19475995 AGGTTTGCTGCCCGTAGCCATTAAAGTGTCTGAAATGGGGAAACGTTTTTCAAATGGTCACAAAA
710 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* *
19476060 TCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGTGCATACCAACAAAAATACAAGGATCACG
775 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACG
* *
19476125 TCTACCAAGTTT-GGGCCAAAACACCTTCCGAAAAAATTTAAAAAAATCCCGAACCGCAA
840 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGCAA
* * *
19476184 AAAGTGTAAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGGT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
19476249 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * *
19476314 TGCCTAAACCCACCTACTACCCTATCGATCCATGGCTTGTGCATCCCGTCTCTCTGGCCGGCGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
*
19476379 GTGCCCGCCCGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
196 GTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * ** * * * * * * *
19476444 AAAATCTGACCGGACTGAGGATTACGATAGCAAGATTGGCAGCACGTAGAGTGGGACTCGGA-TG
261 AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGAC-CCGACCG
* * *
19476508 ATCCCCGGCTTGCGCATCCC-TCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
325 ATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
*
19476572 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTGCCAGTCTAAGATC-GA
390 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAG-
* * * * *
19476636 ACTAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAAGTCCTGGTGCTGCATTTTTCTTC
454 ACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
* * * * * * *
19476701 GCCGGGGCACCATCGTCGAAACCTCGTCGGAGAACCTGATCGGCCGCATTGGGGTTCCGACGA--
519 GTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
* * *
19476764 ------T-C-GGGGGTGTGCACACATGATGTGCGATGGGCGCTGGTACTTGGCCCTTATTTTGGC
584 GGGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
*
19476821 CCCCTATCCCTTATCAAACCTTC-AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
649 CCCCTATCCCTCATCAAACC-TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* * * *
19476885 TTTGCTGCCAATAGCTATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAGTCT
713 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * * * * *
19476950 TGTGCACTTCGAGTTTTTAGCTGAATTTTTTTGCGCATCCCAAAAAAAATACAACGATCACATCT
778 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * * * * *
19477015 ACCAACTTTGGGGCTAAAAGTCCTTCCAAAAAAATTTTAAAAAATGCCAAACCGTAA
843 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGCAA
*
19477072 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAATGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
*
19477137 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGAAGAAATATGAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * *
19477202 TGCCTAAACCCACCTACCACCATATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCCAGCGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * *
19477267 GTGGCCGCCCGCCTGCCTGCTCGCTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
196 GTGCCCGCCCG-C--CC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * ** * ** * * *
19477332 GTCTAAGAT-TGAACCAGACCGAGGGTTTTGACAATAAGATCGACAGTACGCTGAGGGGGACCCG
257 GTCTAAGATCAG-ACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCG
** * * * ** ** * * * *
19477396 GTCGATCCCCGGCTTACGCATTCTACCCCTCTGGCCATCTGAGCGCCCGCTCGCTTGTTTCTTTG
321 ACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* *
19477461 GTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAAGCATACGAAGTTCCTTCCCAGTCTAAGAT
386 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGAT
* * * * *
19477526 CAGACCGGACTGAGAGTTGCGACAGCACTTGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTC
451 CAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC
** * * * *
19477591 TTCGTCGGGGCACCATCACCAGAGCATCGCCGGGGAACCTGACCGGCGGCA------TT--G--G
516 TTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACG
* * *
19477646 A----GGGG-CCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGCTACCTGGCCCTTATATT
581 ATCGGGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
* *
19477706 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGGGCATTTGAGATTTTATA
646 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
* * ** *
19477771 GGTTTGCTACCAGTAGCGATTAAAGTGTCTGAAATGGGGACTTTTTTTTCAAATGG-CTACGAAA
711 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC-ACAAAA
* * **
19477835 TGTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATGCTGACAAAAATACAAGGATCACG
775 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACG
*
19477900 TCTA-AAACGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATACCGAACC-CTAA
840 TCTACCAA-GTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGC-AA
* * *
19477960 AAGGTTTCAAAAATCGTGAAAAATAGAAAACTAGTCGTCTTGCCATGAAACTTCACGTGAATGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
*
19478025 TAAGGGACCATTGTATTAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * *
19478090 TTCCCAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CC--CTCTCTGGCCGGGGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * *
19478152 GTGCCCGCGCGCCCGCCCGCTTGTTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
196 GTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
** * * * *
19478217 AAGATTGGACCAGACTGAGGGTTGTGGCAGCAGGATTGACAGCACGCAGAGGGGGACCCGACAGA
261 AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGA
* * * *
19478282 TCCCC-AGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCGCTCACACGCTCGTTTCATGGGTTG
326 TCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
* * *
19478346 ACTCAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGA
390 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGA
* * ** *
19478411 CCAGACTGAGGGTTGCGACAGGACATGCTGGGCTCGGGCATGTGCTGGTGCTACATTTTTCTTCA
455 CCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* *
19478476 TCAGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCG-CGGCATTGGGGTTCCTACGATCC
520 TCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGAT-C
* * *
19478540 TGGGGG-CCGGGGGGTGTGCACACATGATGTGCGATCGGTGCTGGTACTTGGCCCTTATATTGGC
584 GGGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
*
19478604 CCCCTATACCTCATCAAACCTCGAGAACTCACACCCCCTTAAGAGAGCATTTGAGATTTTACAGG
649 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA-AGAGCATTTGAGATTTTACAGG
19478669 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
713 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * * *
19478734 TGTGCACTTCGAGTTTTCAGTTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAGGTCT
778 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* *
19478799 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAACAATCCTGAACCACAA
843 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC-GAACCGCAA
* * * * ** *
19478856 AAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCTTGAGATGAAACTTCACGTGATGGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
* * * * *
19478921 TAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTCGCATGTAGAAATATAAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * * * *
19478986 TGCCTAAACCCACCTCCCACACTATCGATCCACGGCTTGCGCATCCCGACTCTGTGGCCGGTGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * *
19479051 GT----GCCCACCCGCCCGCTCATTTCGTCGGCTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
196 GTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * *
19479112 AAGATCAGATCGGA-TCGAGGATTGTGGCAGCAAGATC-AGTAGCACGCAGAGGGGGACCCGACC
261 AAGATCAGACCGGACT-GAGGGTTGCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGACC
* * *
19479175 AATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTGGTTTCGTGGGTT
324 GATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
*
19479240 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCCTTCCCAGTCTAAGATCAG
389 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAG
* * * *
19479305 ACCGGACTGAGGGTTGCGACAGCACTTGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTC
454 ACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
*
19479370 GTCGGGGCACCA---TC---G---C--CGGAGAACCTGACCGACAGCATTGGGGTTCCGACGATC
519 GTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
*
19479424 GGGGGG-CCGGGGGGTGTGCGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG-
584 GGGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
19479487 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
649 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
* *
19479552 TTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTCTTCAAATGGTCACAAAATCTT
714 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
* * *
19479617 GTGCACTTCGAGTTTTCAGCTGAATTTTTTTGTGCATGCCAGCAAAAATACAAGGATCACGTCTA
779 GTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
* *
19479682 CCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAACAATCCTGAACCACAA
844 CCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC-GAACCGCAA
* * * * ** *
19479738 AAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCTTGAGATGAAACTTCACGTGATGGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
* * *
19479803 TAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * * * * * ** *
19479868 TGCCTAAACCCACCTCCCACCCTATCGATCCACGACTTTCGTATCCCATCTCTTTGGATGACGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * *
19479933 GT----ACCCGCCTGCCCGCTCGTTTCGTCGGTTGGCATAGGCATACGGAGTTCATTCCCAGTCT
196 GTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * ** * * * *
19479994 AACATCAGACCGAACTGAGGGTTACGATAGCAGGATCAACAACACGGAGAGGGAGACCCGACCGA
261 AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGA
* * * *
19480059 TCCCCGGCTTGCGCATCCCACCCCTCTGGCCAGCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGA
326 TCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
* * *
19480124 CTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAACATC-GAA
391 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAG-A
* * * * * *
19480188 CCGGATCGAGGGTTGCGGCAGCACATG-TCGAGCTCGAGCATGTGCTGGTGCCGTATTTTTCTTC
455 CCAGACCGAGGGTTGCGACAGCACATGCT-GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
* *
19480252 GTCGGGGCACCA---T-----CA---TCGGAGAACCTGACCGACGGCA-TGGGGTTTCGGCGATC
519 GTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
* * *
19480305 GGGGGGGTCGGGGGGGGTGTGTGCACATGTTGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
584 -GGGGGGTC-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
* * * *
19480370 GCCCCTTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGGATTTGAGATTTTATAG
647 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
* * *
19480435 ATTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTCAAACGGTCACCAAATC
712 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
19480499 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
777 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
* * * *
19480564 AACCAAGTTTGGGACCAAAACTCCTTGCGAAAAAATTTTAAAAAATCTCGAACCGAAA
842 TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGCAA
*
19480622 AAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
**
19480687 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * * * *
19480752 TGCCTAAACCCACCTACTAACCTATCGATCCATGGCATGCGCATCCCGTCTCTCTGGCCGGCATA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * * * * * *
19480817 GTGCCCACACACCCGCCCGGCCACTCATTTCATCGGTTGGCTTAGGCATATGGAGTTCATTCCTA
196 GTG--C-C-CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * * * * **
19480882 GTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGTAGGATCGACAGCACGTAGAGTGACACCCGA
257 GTCTAAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA
* * * * * * ** *
19480947 CTGATCCCCGACTTACGCATCCCACCCCTCTAGTCGGTTGAGC-CCCGCACGCTCGGATCGAGGG
322 CCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTC--GTG
* * * ** * *** *
19481011 GGACTCGATCGATCCTT-GGCTTGC-G-CTTCCCACCCCTTTGGCAGGCTAAGCGCCCGCACA-C
385 GG--T---T-GA--CTTAGGCATACGGAGTT--CA-----TTCCCAGTCTAAGCATACG-A-AGT
*** * * * *
19481072 TCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGACTAAGCATACGGAGTTCTTTCC
433 TCA-TTC-CCAG-T--C-TAAG-AT-C--AG---A---CCAGAC----C-GA-GG-G---TTGCG
* * * * * * * ** *
19481137 CCAGTCTAAGATCGAACCGGAC-CGAGG-GT-TG-TGGCAG-CACATGCTTGGC-TCAGGCATGT
472 ACAG-C--ACAT-G--CTGGGCTCG-GGCATGTGCTGG-TGCCGCAT--TTTTCTTC-GTC--G-
** * **** * * * * * * * ** *
19481196 GCTGGTGCCA-CAT-TTTTCTTCATCGGGGCACC-AACGCCGA-AGCATCGTCGGAGAACCTA--
523 G--GGCACCATCGTCGGAGCATCGTCGGAGAACCTGA--CCGACGGCAT--T-GGGGTTCCGACG
* * *** ** * *
19481255 A-C-AGGCGTCATTGGGGT-T-CTG-ACGATCGGGGGGGCCGGGGAGGGGTGTGCACACATGATG
581 ATCGGGGGGTCCGGGGGGTGTGC-GCAC-AT--GATGTG-C---GA-TGG-GTG----C-TG--G
* * ** ** * * *
19481315 TGCAATGGGTTCTGGTACTCGGCCCTTATATTGGCCCCCTATCCCTCATCAAAGCTTGAGAACTC
629 T--ACTTGGCCCTTATA-TTGGCCC------------CCTATCCCTCATCAAACCTCGAGAACTC
* * *
19481380 ACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGCGTCTTAA
679 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
19481445 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
744 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
19481510 TGTGCACGCCAACAAAAATACAAGCATCACGTCTACCAATTTTGGGGCCAAAACTCCTTCCCAAA
809 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
19481575 AAATTTTAAAAAATCCTGAACCGCAA
874 AAATTTTAAAAAATCC-GAACCGCAA
* * *
19481601 AAAGTTTCAAAAATCTTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAAGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
*
19481666 TAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * *
19481731 TACCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGTC-TA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
*
19481795 GTGCCCGCCCGCCCGCCCACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
196 GTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * * *
19481860 AAGATCAGACCGGATTGAGGGTTACGGTAGTAGGATTGGCAGCACGCAGAGGGGGACCCGGCCGA
261 AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGA
* * * *** * *
19481925 TCCCCGACTTGTGCATCCTGCCCTTCTGGCTTACTGAGCGCCCGTACGCTCATTTCGTGGGTTGA
326 TCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
* * * *
19481990 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATT-CCATTCTAAGATCGGAC
391 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGAC
* * *
19482054 CAGACCGAAGGTTGTGACAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCG-
456 CAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGT
* * * * **
19482118 CTGGGGCACCAACGTCGGAGCATCGTTGGAGAACCTGACCGGCGGCATTGGGGTTTCGGTGATCG
521 C-GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG
* * * ***
19482183 GGGGGCCCGGGGGGTGTGCGCACATGATATGCAAT-GGTGCTCACACTTGGCCCTTATATTGGCC
585 GGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* * * *
19482247 CCTTATCCCTTATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCCTTTTAGATTTTACAGGTT
650 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
*
19482312 TGCTGCCAGTAGTCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
715 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* *
19482377 TACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACATCTAC
780 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* ** *
19482442 CAAGTTTGGCGCCAAAACTTTTTCCGAAAAAATTTTAAAAAATCCCGAACAGCAA
845 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGCAA
* * * * *
19482497 AAAGTTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATAAAACTTCACATGAAGGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
*
19482562 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
**
19482627 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCGTGTCTCTCTGGCCGGCGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
** * * *
19482692 GTGCCCAACCGCCCGCCCGCTCGTTTTGTCAGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCT
196 GTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * ** * *** *
19482757 AACATCGGACCGAACTGAATGTTACAATAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGA
261 AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGA
* ** *
19482822 TCCCCGGCTTGCGCATCCCGTGCCTCTGGCCGGTTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
326 TCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
* * *
19482887 CTTAGGCATACGGAGTTCATTCCCAGTCTCAGCATAGGAAGTTCATCCCCAGTCTAAGATCAGAC
391 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGAC
* * *
19482952 CAGACCGAGGGTTGCGGCAGCACATGTTGGGCTCGGGCATGTGCTGGTGTCGCA-TTTTCTTCGT
456 CAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGT
* *
19483016 CGGGGCACCATCGTCGGAGCATCG-CTGGAGAACCTGACCGGCGGCATAGGGGTTCCGACGATCG
521 CGGGGCACCATCGTCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG
* *
19483080 AGGGGG-CCGGGGGGAGTGCGAACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
585 -GGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
* * *
19483144 CCCCTATCCCTCATCAAACCTCGAGAACGCACACCCCTTTAAAGCGCATTTGAGATTTTACAGGT
649 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
*
19483209 TTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
714 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
* * *
19483274 GTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAGGGATCTCGTCTA
779 GTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
*
19483339 CCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAAGTTTTAAAAAATCCTGAACCGTAA
844 CCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTTAAAAAATCC-GAACCGCAA
* * * * *
19483395 AAATTTTCAAAAATTGTGAAAAAAAGAAAACGAGCCGTCTTTCCATGAAACTTCACGTGAAGGCT
1 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
*
19483460 TAAGGGACCATTG--T--A--T-C-A---ATTAAAA--GC-----CAT-----AA-AT----ATG
66 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * * * *
19483497 TGCCTAAACCCACCTACCACCCTATCGAACCACAGCTTGCGCTTCCCGTCTCTCTGGCTGGGGTA
131 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* *
19483562 GTGCCCACCCGTCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
196 GTG----CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* **
19483627 GTCTAAGATCGGACCGGACCAAGGGTTGCGGCAGCA
257 GTCTAAGATCAGACCGGACTGAGGGTTGCGGCAGCA
19483663 CATGCTGGGC
Statistics
Matches: 7924, Mismatches: 1028, Indels: 597
0.83 0.11 0.06
Matches are distributed among these distances:
861 99 0.01
862 2 0.00
864 1 0.00
865 262 0.03
866 249 0.03
868 2 0.00
870 65 0.01
873 3 0.00
874 80 0.01
875 87 0.01
876 60 0.01
877 1 0.00
878 1 0.00
880 8 0.00
881 314 0.04
882 703 0.09
883 48 0.01
884 526 0.07
885 425 0.05
886 71 0.01
887 438 0.06
888 674 0.09
889 4 0.00
890 5 0.00
891 26 0.00
892 245 0.03
893 194 0.02
894 5 0.00
895 395 0.05
896 743 0.09
897 317 0.04
898 600 0.08
899 92 0.01
900 63 0.01
901 63 0.01
902 170 0.02
903 2 0.00
904 1 0.00
905 13 0.00
906 4 0.00
907 4 0.00
908 7 0.00
909 9 0.00
911 1 0.00
912 2 0.00
913 3 0.00
914 2 0.00
917 1 0.00
918 3 0.00
919 2 0.00
921 1 0.00
922 8 0.00
923 6 0.00
924 7 0.00
925 18 0.00
926 13 0.00
927 12 0.00
928 11 0.00
929 7 0.00
930 10 0.00
932 7 0.00
933 6 0.00
935 9 0.00
936 7 0.00
937 9 0.00
938 4 0.00
939 2 0.00
940 1 0.00
942 5 0.00
943 6 0.00
944 1 0.00
946 1 0.00
947 2 0.00
948 5 0.00
949 6 0.00
950 9 0.00
951 13 0.00
952 7 0.00
953 4 0.00
954 4 0.00
955 6 0.00
956 4 0.00
959 3 0.00
960 4 0.00
961 14 0.00
963 2 0.00
965 11 0.00
966 13 0.00
967 3 0.00
968 3 0.00
971 1 0.00
973 4 0.00
974 133 0.02
975 13 0.00
976 1 0.00
978 101 0.01
979 312 0.04
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (898 bp):
AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
GTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGA
TCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGAC
CAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGT
CGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGG
GGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCGAACCGCAA
Found at i:19475720 original size:26 final size:26
Alignment explanation
Indices: 19475691--19475743 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19475681 GTTGACTTAC
19475691 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19475717 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19475743 G
1 G
19475744 ATCGGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19476615 original size:26 final size:26
Alignment explanation
Indices: 19476578--19476630 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19476568 GTTGACTTAG
*
19476578 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19476604 GCATACGAAGTTCATTGCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19476630 G
1 G
19476631 ATCGAACTAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19477508 original size:26 final size:26
Alignment explanation
Indices: 19477471--19477523 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19477461 GTTGACTTAG
* *
19477471 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19477497 GCATACGAAGTTCCTTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19477523 G
1 G
19477524 ATCAGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19478382 original size:26 final size:26
Alignment explanation
Indices: 19478352--19478404 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19478342 GTTGACTCAG
19478352 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19478378 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19478404 G
1 G
19478405 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19479019 original size:896 final size:895
Alignment explanation
Indices: 19475661--19483645 Score: 8605
Period size: 882 Copynumber: 8.9 Consensus size: 895
19475651 CAGACTTGCA
* *
19475661 CCCGTACGCTCGTTTCGTGGGTTGACTTACGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * *
19475726 GTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAT
66 GTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* **
19475791 GTACTGGTGCCATATTTTTCTTCGTCGGGG---CA---C----CATCGTCGGAGAACCTGACCGA
131 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCACGTCGGAGCATCGTCGGAGAACCTGACCG-
* * * *
19475846 CGGCATTGGGGTTCCGATGATCAGGGGGGCCGGGGGGGTGTGCGCACATAATGTGCGATGGGTGC
195 CGGCATTGGGGTTCCGACGATCCGGGGGGCC-GGGGGGTGTGCACACATGATGTGCGATGGGTGC
*
19475911 TGGTAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
259 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
* * *
19475976 AGAGCATTTGAGATTTTACAGGTTTGCTGCCCGTAGCCATTAAAGTGTCTGAAATGGGGAAACGT
324 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* *
19476041 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGTGCATACCAA
389 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* *
19476106 CAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACACCTTCCGAAAAAATTTAAAAAA
454 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * * * *
19476170 ATCCCGAACCGCAAAAAGTGTAAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
519 ATCCTGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
*
19476235 TTCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
584 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
* * *
19476300 GAAATATGAAGATGTGCCTAAACCCACCTACTACCCTATCGATCCATGGCTTGTGCATCCCGTCT
649 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG-CT
*
19476365 CTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
713 CTCTGGCCGGCGTAGTGCCCG-CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
* * * * * * * *
19476430 TTCATTCCCAGTCTAAAATCTGACCGGACTGAGGATTACGATAGCAAGATTGGCAGCACGTAGAG
777 TTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCGACAGCACGCAGAG
* * * * *
19476495 TGGGACTCGGA-TGATCCCCGGCTTGCGCATCCC-TCCCTCTGGCCGACTGAGCG
842 GGGGAC-CCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
*
19476548 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * *
19476613 GTTCATTGCCAGTCTAAGATC-GAACTAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCA
66 GTTCATTCCCAGTCTAAGATCAG-ACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCA
* * * * * * *
19476677 AGTCCTGGTGCTGCATTTTTCTTCGCCGGGGCACCATCGTCGAAACCTCGTCGGAGAACCTGATC
130 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA-CGTCGGAGCATCGTCGGAGAACCTGA-C
* * *
19476742 GGCCGCATTGGGGTTCCGACGAT---------C-GGGGGTGTGCACACATGATGTGCGATGGGCG
193 CGCGGCATTGGGGTTCCGACGATCCGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTG
* *
19476797 CTGGTACTTGGCCCTTATTTTGGCCCCCTATCCCTTATCAAACCTTC-AGAACTCACACCCCCTT
258 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAACTCACACCCCCTT
* * *
19476861 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCTATTAAAGTGTCTAAAATGGGGACAC
322 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* * * *
19476926 TTTTTTCAAATGGTCACAAAGTCTTGTGCACTTCGAGTTTTTAGCTGAATTTTTTTGCGCATCCC
387 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* * * * * * *
19476991 AAAAAAAATACAACGATCACATCTACCAACTTTGGGGCTAAAAGTCCTTCCAAAAAAATTTTAAA
452 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* ** *
19477056 AAATGCC-AAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
517 AAAT-CCTGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
*
19477120 AACTTCACGTGAATGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
581 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
* * *
19477185 GAAGAAATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTACGCATCCCG
646 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
* * * *
19477250 TCTCTCTGGCCAGCGTAGTGGCCGCCCGCCTGCCTGCTCGCTCGTTTTGTCGGTTGGCTTAGGCA
711 -CTCTCTGGCCGGCGTAGT----GCCCGCC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * ** ** * *
19477315 TACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGAGGGTTTTGACAATAAGATCGACAGTA
770 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCGACAGCA
* ** * * ** **
19477380 CGCTGAGGGGGACCCGGTCGATCCCCGGCTTACGCATTCTACCCCTCTGGCCATCTGAGCG
835 CGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * * * *
19477441 CCCGCTCGCTTGTTTCTTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAAGCATACGAA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * *
19477506 GTTCCTTCCCAGTCTAAGATCAGACCGGACTGAGAGTTGCGACAGCACTTGCTGGGCTCAGGCAT
66 GTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
** * * *
19477571 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCAGAGCATCGCCGGGGAACCTGACCG
131 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA-CGTCGGAGCATCGTCGGAGAACCTGACC-
19477636 GCGGCA------TT--G--GA-----GGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGC
194 GCGGCATTGGGGTTCCGACGATCCGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGC
* *
19477686 TGCTACCTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
259 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
* * * * **
19477751 AGGGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCGATTAAAGTGTCTGAAATGGGGACTTTT
324 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * * **
19477816 TTTTCAAATGG-CTACGAAATGTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATGCTG
389 TTTTCAAATGGTC-ACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
*
19477880 ACAAAAATACAAGGATCACGTCTA-AAACGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
453 ACAAAAATACAAGGATCACGTCTACCAA-GTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* * *
19477944 AAATACC-GAACC-CTAAAAGGTTTCAAAAATCGTGAAAAATAGAAAACTAGTCGTCTTGCCATG
517 AAAT-CCTGAACCAC-AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
* *
19478007 AAACTTCACGTGAATGCTTAAGGGACCATTGTATTAATTTACAAGCCATAAAAATGGCATTGGCA
580 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* *
19478072 TGCAGAAATATGAAGATGTTCCCAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CC
645 TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
* * *
19478136 -CTCTCTGGCCGGGGTAGTGCCCGCGCGCCCGCCCGCTTGTTTCGTCGATTGGCTTAGGCATACG
710 GCTCTCTGGCCGGCGTAGTGCCCGC-CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * ** * *
19478200 GAGTTCATTCCCAGTCTAAGATTGGACCAGACTGAGGGTTGTGGCAGCAGGATTGACAGCACGCA
774 GAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCGACAGCACGCA
* * *
19478265 GAGGGGGACCCGACAGATCCCCAGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCG
839 GAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * * *
19478322 CTCACACGCTCGTTTCATGGGTTGACTCAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
*
19478387 GTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGGACATGCTGGGCTCGGGCAT
66 GTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
** * *
19478452 GTGCTGGTGCTACATTTTTCTTCATCAGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCG
131 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA-CGTCGGAGCATCGTCGGAGAACCTGACCG
* * *
19478517 CGGCATTGGGGTTCCTACGATCCTGGGGGCCGGGGGGTGTGCACACATGATGTGCGATCGGTGCT
195 CGGCATTGGGGTTCCGACGATCCGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCT
*
19478582 GGTACTTGGCCCTTATATTGGCCCCCTATACCTCATCAAACCTCGAGAACTCACACCCCCTTAAG
260 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA-
19478647 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
324 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * *
19478712 TTTTCAAATGGTCACAAAATCTTGTGCACTTCGAGTTTTCAGTTGAATTTTTTTGTGCATGCCAA
389 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* *
19478777 CAAAAATACAAGGATCAGGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAACA
454 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * * **
19478842 ATCCTGAACCACAAAAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCTTGAGATGAAAC
519 ATCCTGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* * * * *
19478907 TTCACGTGATGGCTTAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTCGCATGTA
584 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
* * *
19478972 GAAATATAAAGATGTGCCTAAACCCACCTCCCACACTATCGATCCACGGCTTGCGCATCCCGACT
649 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG-CT
* * * * *
19479037 CTGTGGCCGGTGTAGTG--C-CCACCCGCCCGCTCATTTCGTCGGCTGGCTTAGGCATACGGAGT
713 CTCTGGCCGGCGTAGTGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* * * ** * * *
19479099 TCATTCCCAGTCTAAGATCAGATCGGA-TCGAGGATTGTGGCAGCAAGATC-AGTAGCACGCAGA
778 TCATTCCCAGTCTAAGATCGGACCGGACT-GAGGGTTACGACAGCAGGATCGA-CAGCACGCAGA
* * *
19479162 GGGGGACCCGACCAATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
841 GGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* *
19479217 CCCGCACGCTGGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * *
19479282 GTTCCTTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCGACAGCACTTGCTGGGCTCAGGCAT
66 GTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
19479347 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA--TC---G---C--CGGAGAACCTGACCGA
131 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCACGTCGGAGCATCGTCGGAGAACCTGACCG-
* * *
19479402 CAGCATTGGGGTTCCGACGAT-CGGGGGGCCGGGGGGTGTGCGCACATAATGTGCGATGGGTGCT
195 CGGCATTGGGGTTCCGACGATCCGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCT
19479466 GGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
260 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
*
19479530 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTT
325 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* * * *
19479595 CTTCAAATGGTCACAAAATCTTGTGCACTTCGAGTTTTCAGCTGAATTTTTTTGTGCATGCCAGC
390 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
*
19479660 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAACAA
455 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* * * **
19479725 TCCTGAACCACAAAAAGTTTCCAAAATCATGAAAATTAGAAAACAAGTCGTCTTGAGATGAAACT
520 TCCTGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * *
19479790 TCACGTGATGGCTTAAAGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
585 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
* * * * * *
19479855 AAATATAAAGATGTGCCTAAACCCACCTCCCACCCTATCGATCCACGACTTTCGTATCCCATCTC
650 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC-GCTC
* ** * * * *
19479920 TTTGGATGACGTAGT--AC-CCGCCTGCCCGCTCGTTTCGTCGGTTGGCATAGGCATACGGAGTT
714 TCTGGCCGGCGTAGTGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
* * * * * * *
19479982 CATTCCCAGTCTAACATCAGACCGAACTGAGGGTTACGATAGCAGGATCAACAACACGGAGAGGG
779 CATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCGACAGCACGCAGAGGG
* * *
19480047 AGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCAGCTGAGCG
844 GGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* *
19480099 CCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * *
19480164 GTTCATTCCCAGTCTAACATC-GAACCGGA-TCGAGGGTTGCGGCAGCACATG-TCGAGCTCGAG
66 GTTCATTCCCAGTCTAAGATCAG-ACCAGACT-GAGGGTTGCGACAGCACATGCT-GGGCTCGGG
*
19480226 CATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCA--T-----CA---TCGGAGAACCTGAC
128 CATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCACGTCGGAGCATCGTCGGAGAACCTGAC
* * * * ** *
19480281 CGACGGCA-TGGGGTTTCGGCGATCGGGGGGGTCGGGGGGGGTGTGTGCACATGTTGTGCGATGG
193 CG-CGGCATTGGGGTTCCGACGATCCGGGGGG-C-CGGGGGGTGTGCACACATGATGTGCGATGG
* *
19480345 GTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCAAGAACTCACACCCCC
255 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
* * *
19480410 TTAAAGAGGATTTGAGATTTTATAGATTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
320 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
* *
19480475 AC-TTTTTCAAACGGTCACCAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
385 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* * *
19480539 CCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGACCAAAACTCCTTGCGAAAAAATTTTA
450 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTA
19480604 AAAAAT-CTCGAACCGA-AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
515 AAAAATCCT-GAACC-ACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
19480667 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
578 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
** * * * *
19480732 CACACAGAAATATGAAGATGTGCCTAAACCCACCTACTAACCTATCGATCCATGGCATGCGCATC
643 CATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * *
19480797 CCGTCTCTCTGGCCGGCATAGTGCCCACACACCCGCCCGGCCACTCATTTCATCGGTTGGCTTAG
708 CCG-CTCTCTGGCCGGCGTAGTGCCCGC-CGCCCGCCC-G---CTCGTTTCGTCGGTTGGCTTAG
* * * * * * *
19480862 GCATATGGAGTTCATTCCTAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGTAGGATCGACA
767 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCGACA
* * ** * * * * * * *
19480927 GCACGTAGAGTGACACCCGACTGATCCCCGACTTACGCATCCCACCCCTCTAGTCGGTTGAGC-
832 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
** * * * * **
19480990 CCCGCACGCTCGGATCGAGGGGGACTCGATCGATCCTT-GGCTTGC-G-CTTCCCACCCCTTTGG
1 CCCGCACGCTCGTTTC--GTGGG--T---T-GA--CTTAGGCATACGGAGTT--CA-----TTCC
* *** * ** * ** ** * * * * * ** *
19481052 CAGGCTAAGCGCCCGCACACTCATTTCGTGGGT-TGACTTAG-GCATACGGAGTTCATTCCCAGA
49 CAGTCTAAGCATACGGA-GTTCATTCCCAGTCTAAGA-TCAGACCAGACTGAG--GGTT-GC-GA
* * ** ** ** * * ****** *
19481115 CTAAGCATACGGAGTTCTTTC-CCCA-GT-CTAAGATCGAACCGGACCGAGGGTT-GT-GGCAGC
108 C--AGCACATGCTGGGC--TCGGGCATGTGCT--GGT-G--CCGCA-TTTTTCTTCGTCGG-GGC
* * * * * * * *****
19481175 A-CATGCTTGGCTCAGGCAT-GTGCTGGTGCCACATTTTTCTTCATCGGGGCACCAACG--CCGA
162 ACCACG-TCGG---A-GCATCGT-C-GGAG--A-A-----CCTGACCGCGGCATTGGGGTTCCGA
* * ** **** * ***** * * * * * ***
19481236 AGCATCGTCGGAGAACCTAACAGGCGT-CATTGGGGTTCTGACGATCGGGGGGGCCGGGGAGGGG
212 CG-ATC--CGGGGGGCC-GGGGGGTGTGCACACATGATGTG-CGAT---GGGTG-CTGGTACTTG
** ** * ***** * *** *** ** * * ****
19481300 TGTGCACACA-TGATGTGCAATGGGTTC-TGGTA-CTCG-GCCCTTATATTGGCCCCC-TATCCC
268 -GCCCTTATATTGGCCCCCTAT-CCCTCATCAAACCTCGAGAACTCACA----CCCCCTTAAAGA
* *** * * * ** ** ** ** *
19481360 TCATCAAAG-CTTGAGA-ACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCC
327 GCATTTGAGATTTTACAGGTTTGC-TGCCAGT--AG-CCA-TT---A----A-A-G--TG-T--C
* ** *
19481423 AGTAGCCATTAAAGCGTCTTAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
373 --T-G--A--AATG-G--------GGACAC-TTT-TTTCAAATGGTCACAAAATCTTGTACACTT
* * *
19481488 CGAGTTTTTAGCTGAATTTTTTTGTGCACGCCAACAAAAATACAAGCATCACGTCTACCAATTTT
420 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT
* * *
19481553 GGGGCCAAAACTCCTTCCCAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCTT
485 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCACAAAAAGTTTCAAAAATCAT
* * *
19481618 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAAGCTTAAAGGACCATTGTATG
550 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
* *
19481683 AATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTACCTAAACCCACCAAC
615 AATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
*
19481748 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGTC-TAGTGCCCGCCCGCCCGCC
680 CACCCTATCGATCCACGGCTTGCGCATCCCG-CTCTCTGGCCGGCGTAGTGCCCG-CCGCCCGCC
* * *
19481812 CACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATTG
743 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTG
** * * * * * *
19481877 AGGGTTACGGTAGTAGGATTGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGACTTGTGCATC
808 AGGGTTACGACAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATC
* * ***
19481942 CTGCCCTTCTGGCTTACTGAGCG
873 CCGCCCCTCTGGCCGGCTGAGCG
* * *
19481965 CCCGTACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * * *
19482030 GTTCATT-CCATTCTAAGATCGGACCAGACCGAAGGTTGTGACAGCACATGCTGGGCTCAGGCAT
66 GTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
*
19482094 GTGCTGGTGCCGCATTTTTCTTCG-CTGGGGCACCAACGTCGGAGCATCGTTGGAGAACCTGACC
131 GTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACC-ACGTCGGAGCATCGTCGGAGAACCTGACC
* ** * * *
19482158 GGCGGCATTGGGGTTTCGGTGAT-CGGGGGGCCCGGGGGGTGTGCGCACATGATATGCAAT-GGT
194 -GCGGCATTGGGGTTCCGACGATCCGGGGGG-CCGGGGGGTGTGCACACATGATGTGCGATGGGT
*** * *
19482221 GCTCACACTTGGCCCTTATATTGGCCCCTTATCCCTTATCAAACCTCGAGAACTCACACCCCCTT
257 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* * *
19482286 AAAGAGCCTTTTAGATTTTACAGGTTTGCTGCCAGTAGTCATTAAAGTGTCTGAAATGGGGACAC
322 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
*
19482351 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCC
387 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* * **
19482416 AACAAAAATACAAGGATCACATCTACCAAGTTTGGCGCCAAAACTTTTTCCGAAAAAATTTTAAA
452 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* * * *
19482481 AAATCCCGAA-CAGCAAAAAGTTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATAA
517 AAATCCTGAACCA-CAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* *
19482545 AACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAC
581 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
**
19482610 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCGTG
646 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
* * * *
19482675 TCTCTCTGGCCGGCGTAGTGCCCAACCGCCCGCCCGCTCGTTTTGTCAGTTGGCTTAGGCATACA
711 -CTCTCTGGCCGGCGTAGTGCCC-GCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * ** * * *
19482740 GAGTTCATTCCCAGTCTAACATCGGACCGAACTGAATGTTACAATAGCAGGATCGGCAGCACGCA
774 GAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCGACAGCACGCA
** *
19482805 GAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGTGCCTCTGGCCGGTTGAGCG
839 GAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
*
19482862 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTCAGCATA-GGA
1 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGG-
* * * *
19482926 AGTTCATCCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGTTGGGCTCGGGCA
65 AGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCA
*
19482991 TGTGCTGGTGTCGCA-TTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CTGGAGAACCTGAC
130 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA-CGTCGGAGCATCGTC-GGAGAACCTGAC
* *
19483054 CGGCGGCATAGGGGTTCCGACGAT-CGAGGGGGCCGGGGGGAGTGCGA-ACATGATGTGCGATGG
193 C-GCGGCATTGGGGTTCCGACGATCCG-GGGGGCCGGGGGGTGTGC-ACACATGATGTGCGATGG
* *
19483117 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACGCACACCCCT
255 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
* *
19483182 TTAAAGCGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
320 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
*
19483247 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCATG
385 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* *
19483312 CCAACAAAAATACAGGGATCTCGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAAGTTTT
450 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTT
** * ** * * *
19483376 AAAAAATCCTGAACCGTAAAAATTTTCAAAAATTGTGAAAAAAAGAAAACGAGCCGTCTTTCCAT
514 AAAAAATCCTGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAT
*
19483441 GAAACTTCACGTGAAGGCTTAAGGGACCATTG--T--A--T-C-A---ATTAAAA--GC-----C
579 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
* * *
19483488 AT-----AA-AT----ATGTGCCTAAACCCACCTACCACCCTATCGAACCACAGCTTGCGCTTCC
644 ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* * *
19483543 CGTCTCTCTGGCTGGGGTAGTGCCCACCCGTCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGG
709 CG-CTCTCTGGCCGGCGTAGTG----CCCG-CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
19483608 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC
768 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC
19483646 CAAGGGTTGC
Statistics
Matches: 5980, Mismatches: 868, Indels: 513
0.81 0.12 0.07
Matches are distributed among these distances:
870 64 0.01
874 71 0.01
875 2 0.00
880 8 0.00
881 325 0.05
882 700 0.12
883 48 0.01
884 428 0.07
885 138 0.02
886 5 0.00
887 396 0.07
888 662 0.11
889 5 0.00
890 5 0.00
891 18 0.00
892 243 0.04
893 190 0.03
894 5 0.00
895 391 0.07
896 650 0.11
897 313 0.05
898 427 0.07
899 22 0.00
900 7 0.00
901 3 0.00
905 20 0.00
906 10 0.00
907 6 0.00
908 1 0.00
909 3 0.00
910 2 0.00
911 11 0.00
912 5 0.00
913 3 0.00
914 5 0.00
915 9 0.00
916 3 0.00
917 3 0.00
919 1 0.00
920 1 0.00
921 1 0.00
925 1 0.00
926 2 0.00
928 3 0.00
929 3 0.00
930 10 0.00
931 11 0.00
932 17 0.00
933 10 0.00
934 5 0.00
936 3 0.00
937 23 0.00
938 26 0.00
939 9 0.00
940 7 0.00
941 13 0.00
942 18 0.00
943 13 0.00
944 8 0.00
945 2 0.00
946 5 0.00
947 4 0.00
948 3 0.00
949 3 0.00
950 8 0.00
951 6 0.00
952 5 0.00
953 5 0.00
954 11 0.00
955 3 0.00
956 3 0.00
957 2 0.00
958 3 0.00
959 4 0.00
960 14 0.00
961 13 0.00
962 1 0.00
963 1 0.00
965 4 0.00
966 7 0.00
967 6 0.00
968 4 0.00
971 1 0.00
973 4 0.00
974 121 0.02
975 12 0.00
976 4 0.00
978 18 0.00
979 309 0.05
980 2 0.00
ACGTcount: A:0.26, C:0.26, G:0.24, T:0.25
Consensus pattern (895 bp):
CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
GTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCACGTCGGAGCATCGTCGGAGAACCTGACCGC
GGCATTGGGGTTCCGACGATCCGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTG
GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
CCTGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGCTCTC
TGGCCGGCGTAGTGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
TTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCGACAGCACGCAGAGGGGG
ACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
Found at i:19479284 original size:26 final size:26
Alignment explanation
Indices: 19479247--19479299 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19479237 GTTGACTTAG
*
19479247 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19479273 GCATACGAAGTTCCTTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19479299 G
1 G
19479300 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.28, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19480166 original size:26 final size:26
Alignment explanation
Indices: 19480129--19480187 Score: 95
Period size: 26 Copynumber: 2.3 Consensus size: 26
19480119 GTTGACTTAG
19480129 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19480155 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19480181 -CAT-CGAA
1 GCATACGAA
19480188 CCGGATCGAG
Statistics
Matches: 31, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
24 3 0.10
25 3 0.10
26 25 0.81
ACGTcount: A:0.31, C:0.27, G:0.17, T:0.25
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19481123 original size:26 final size:27
Alignment explanation
Indices: 19481093--19481146 Score: 83
Period size: 26 Copynumber: 2.0 Consensus size: 27
19481083 GTTGACTTAG
19481093 GCATACGGAGTTCATT-CCCAGACTAA
1 GCATACGGAGTTCATTCCCCAGACTAA
* *
19481119 GCATACGGAGTTCTTTCCCCAGTCTAA
1 GCATACGGAGTTCATTCCCCAGACTAA
19481146 G
1 G
19481147 ATCGAACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
26 15 0.60
27 10 0.40
ACGTcount: A:0.26, C:0.28, G:0.20, T:0.26
Consensus pattern (27 bp):
GCATACGGAGTTCATTCCCCAGACTAA
Found at i:19482024 original size:26 final size:25
Alignment explanation
Indices: 19481995--19482046 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 25
19481985 GTTGACTTAG
19481995 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATT-CCAGTCTAA
* *
19482021 GCATATGGAGTTCATTCCATTCTAA
1 GCATACGGAGTTCATTCCAGTCTAA
19482046 G
1 G
19482047 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 9 0.38
26 15 0.62
ACGTcount: A:0.27, C:0.23, G:0.19, T:0.31
Consensus pattern (25 bp):
GCATACGGAGTTCATTCCAGTCTAA
Found at i:19482929 original size:26 final size:26
Alignment explanation
Indices: 19482892--19482941 Score: 75
Period size: 26 Copynumber: 1.9 Consensus size: 26
19482882 GTTGACTTAG
*
19482892 GCATACGGAGTTCATTCCCAGTCTCA
1 GCATACGGAGTTCATCCCCAGTCTCA
19482918 GCATA-GGAAGTTCATCCCCAGTCT
1 GCATACGG-AGTTCATCCCCAGTCT
19482942 AAGATCAGAC
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
25 2 0.09
26 20 0.91
ACGTcount: A:0.24, C:0.30, G:0.20, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATCCCCAGTCTCA
Found at i:19484503 original size:26 final size:26
Alignment explanation
Indices: 19484474--19484529 Score: 112
Period size: 26 Copynumber: 2.2 Consensus size: 26
19484464 TGTGTTGACT
19484474 TAAGCATACGAAGTTCATTCCCAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
19484500 TAAGCATACGAAGTTCATTCCCAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
19484526 TAAG
1 TAAG
19484530 ATCGGACCGG
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 30 1.00
ACGTcount: A:0.32, C:0.25, G:0.16, T:0.27
Consensus pattern (26 bp):
TAAGCATACGAAGTTCATTCCCAGTC
Found at i:19485350 original size:896 final size:890
Alignment explanation
Indices: 19483607--19486951 Score: 4336
Period size: 892 Copynumber: 3.8 Consensus size: 890
19483597 GTTGGCTTAG
*
19483607 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* **
19483672 CTCGGGCATGTGCTGGTGCAC-ATTTTTCTTCATCAGGGCACCATCGTCGGAGCATCATCGGAGA
66 CTCGGGCATGTGCTGGTGC-CGATTTTTCTTCGTC-GGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
19483736 ACTTGAC-CGCGGCATTGGGGTTCCGACTATTGGGGGGGCC-AGGGGAAGTTGTGTGCACATGAT
129 ACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGA-GGG-AG-TGTGCGCACATGAT
* * * * *
19483799 GTTCTATGGGTGCTGGAACTTGGCCCTCATATTGGCCCCCTATCCCTCAT-AAA-CTTGAGAACT
191 GTGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACT
19483862 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
256 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
19483927 AAT-GGAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAATTTTTTAGCTGAATTTT
321 AATGGGA-ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * *
19483991 TTTGTGCATGCCAACAAAAAT--AAGGATCACGTCTACCGAGTTTGAGGCTAAAACTCCTTCCGA
385 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGTGGCCAAAACTCCTTCCAA
* * * ** * * *
19484054 AAAAATTTTTAAAAATCTTGAACCGGAAAAAGTTTTGACAATCATGAGAAATAGAAAACGAGTCG
450 AAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* * *
19484119 TGTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCACTGTATGAATTTACAAGCCATAAAAAT
515 TCTTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
19484184 GGCATTGGCATGCAGAAATATGAATATGTGCCTAAACCCACCTACCACCTTATCGATCGACGGCT
580 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
19484249 TGCGCATCCCGTCTCTCTGGCCAGCGAAGTGCCCTCCCGTCCGCCCGCTCGTTTCGTCGGTTGGC
645 TGCGCATCCCGTCTCTCTGGCGA-CGCAGTG-CCT---GCCCACCCGCTCGTTTCGTCGGTTGGC
* ** *
19484314 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAAGGTTACGGTAGCAGGATT
705 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAAGGTTACGGCAGCAGGATT
* * * * ** *
19484379 GGTAGCATGCAGAGAGGGATCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
770 GGTAGCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGA
* * *
19484444 ACGCCCGCACGCTCGTTCCATGTGTTGACTTAAGCATACGAAGTTCATTCCCAGTCTAA
835 GCG-CCGCACGCTCGTTCCGTGGGTTGACTT-AGCATACG-AGTTCATTCCCAGTCTAA
* *
19484503 GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCGGACCGTGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
19484568 CTCGGGCATGTGCTGGTGCAC-ATTTTTCTTCGTCGGGTCACCATCGTCGGAGCATCGCTGGAGA
66 CTCGGGCATGTGCTGGTGC-CGATTTTTCTTCGTCGGG-CACCATCGTCGGAGCATCGCCGGAGA
* * * * * *
19484632 ACCTTACTGGCAGCATTGGGGATCAGGCGATCGGGGGGGTCGAGGGACGTTGTGCGCACATGATG
129 ACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGAGGGA-G-TGTGCGCACATGATG
* * * *
19484697 TTCTATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATGAAACCTCGAGAACTC
192 TGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTC
* * * * *
19484762 ACACCTCCTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAATAGCCACTACAGTGTCTGAA
257 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
19484827 ATGGGAACACTTTTTTCAAATGGCCACAAAATCTCGTACACTTCGAGTTTTTAGCTGAATTTTTT
322 ATGGGAACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * *
19484892 TTTACATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGTTGCCAAAACTCCTTCCAAAA
387 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGTGGCCAAAACTCCTTCCAAAA
* *
19484957 AAATTTTAAAAAATCTTGAACCGCAAATAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
452 AAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * * *
19485022 TTGTAATGAAAGTTCACGTGAAGGCTTAAGGGACCATTGTAAGAATTTACAAGCCAAAAAAAT-G
517 TTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * * *
19485086 CATTGGCATGCAGAAATATGAAGATATGCCTAAACCTATCTACCACCCTATCGATCCACAGCTTA
582 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
19485151 CGCATCCCGTCTCTCTGGCTGACGCAGTGCCTGCCCACCCGCTCATTTCATCGGTTGGCTTAGGC
647 CGCATCCCGTCTCTCTGGC-GACGCAGTGCCTGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * *
19485216 ATACGGAGTTCATTCCCAATCTAAGATCAGACCGGATCGACGGTTACGGCAACAGGATTGGTAGC
711 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAAGGTTACGGCAGCAGGATTGGTAGC
* * *
19485281 ACATAGAGGGGGACCCGGCCAATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGATTGAGCGTCC
776 ACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCG-CC
*
19485346 GCACGCTCCTTCCGTGGGTTGAC-T----T----G----------G-----
840 GCACGCTCGTTCCGTGGGTTGACTTAGCATACGAGTTCATTCCCAGTCTAA
* * *
19485373 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
19485438 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGCCGGAGCAT-GCCGGAGA
66 CTCGGGCATGTGCTGGTGCCG-ATTTTTCTTCGTCG-GGCACCATCGTCGGAGCATCGCCGGAGA
** * * * *
19485502 ACCTGA-TCAACCGCATTGGGGTTCCGACGATCGAGGGGGCCGGGGTGAGTGTGCGCACATGTTG
129 ACCTGACT-GGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGAGG-GAGTGTGCGCACATGATG
* *
19485566 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAAAACTC
192 TGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTC
* *
19485631 ACACCCCCTTAAAGAGCATTCGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA-TAGTCTAA
257 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT-GTCTGA
* ** **
19485695 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACCACGAGTTTTTAGCTGAATTCCT
321 AATGGGAACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
*
19485760 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-TGGGCCAAAACTCCTTCCGA
386 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGT-GGCCAAAACTCCTTCCAA
* ** * * * *
19485824 AAAAGTTTTAAAAAATCCCCAATCGTAAAAAGTTTCGAAAATTGTGAAAAATAGAAAACGAGTCG
450 AAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* * *
19485889 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGCATGAATTTACCAGCCATAAAAAT
515 TCTTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
**
19485954 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
580 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * ** *
19486019 TGCGCATCCTGTCTCTCTGGCG-GGC-G-GGCAG-CCGTCCGCTCGTTTTGTCGGTTGGCTTAGG
645 TGCGCATCCCGTCTCTCTGGCGACGCAGTGCCTGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * * ** * * **
19486080 CATACAGAGTTCATTCACAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAAGATCGACAG
710 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAAGGTTACGGCAGCAGGATTGGTAG
** * * *
19486145 CACGTAGAAGGGGGACCAAGCCGATCCCCGGCTTGCGTATCCTGCCCTTCTGGCCGACTGAGCGC
775 CACGTAG-AGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGC
* **
19486210 CTGCACGTTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
839 C-GCACGCTCGTTCCGTGGGTTGACTTA-GCATAC-GAGTTCATTCCCAGTCTAA
* ** * *
19486265 GCATACGGAGTTCATTCTCAGTCTAAGATCACACCGGATCGAGGGTTGCGGCAGCACATTCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
19486330 CTCGGGCATGTGCTGGTGCCGTATTTTTC-TCTGTCGGGACACCATCGTCGGAGCATCGCCGAAG
66 CTCGGGCATGTGCTGGTGCCG-ATTTTTCTTC-GTCGGG-CACCATCGTCGGAGCATCGCCGGAG
* *
19486394 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGAGGG-GTGTGCACACATGATG
128 AACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGGCC-GAGGGAGTGTGCGCACATGATG
* * *
19486458 TGCGATGGGTGCTGGTACGTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAAAACTC
192 TGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTC
*
19486523 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCAGAA
257 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
19486588 ATGTGG-ACAATTATTTCAAATGGTCACAAAATTTTGTACACTTCGAGTTTTTAGCTGAATTTTT
322 ATG-GGAACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * *
19486652 TTGTGCATGCCAACAAAAATACAAGGATCGCATCTACCAAGTTTGGGGCCAAAACTCCTTTCAAA
386 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGTGGCCAAAACTCCTTCCAAA
* * *
19486717 AAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGAGTCAT
451 AAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* **
19486782 CTTGGCAA-GAAACTTGACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTGATAAAAAT
516 CTT-GCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * *
19486846 GGCATTGGCATGAAGAAATACGAAGATGTACCTAAACCCACCTACCATCCTATCGATCCACGGCT
580 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
19486911 TGTGCATTCCGTCTCTCTGGCCGGCGTAGTGCC-GCCCACCC
645 TGCGCATCCCGTCTCTCTGG-CGACGCAGTGCCTGCCCACCC
19486952 CCTTAAAGAG
Statistics
Matches: 2134, Mismatches: 255, Indels: 120
0.85 0.10 0.05
Matches are distributed among these distances:
865 85 0.04
866 71 0.03
867 2 0.00
868 4 0.00
869 359 0.17
870 197 0.09
871 32 0.01
872 3 0.00
875 1 0.00
877 1 0.00
885 1 0.00
887 1 0.00
890 1 0.00
891 4 0.00
892 542 0.25
893 51 0.02
894 4 0.00
895 6 0.00
896 289 0.14
897 92 0.04
898 4 0.00
899 146 0.07
900 86 0.04
901 152 0.07
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (890 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGATTTTTCTTCGTCGGGCACCATCGTCGGAGCATCGCCGGAGAAC
CTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGAGGGAGTGTGCGCACATGATGTGCG
ATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTCACAC
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
GAACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGTGGCCAAAACTCCTTCCAAAAAAAT
TTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
AATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
TCCCGTCTCTCTGGCGACGCAGTGCCTGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
GAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAAGGTTACGGCAGCAGGATTGGTAGCACGTA
GAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCGCACGC
TCGTTCCGTGGGTTGACTTAGCATACGAGTTCATTCCCAGTCTAA
Found at i:19486275 original size:26 final size:26
Alignment explanation
Indices: 19486239--19486291 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19486229 GTTGACTTAG
19486239 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19486265 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19486291 G
1 G
19486292 ATCACACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19487360 original size:422 final size:424
Alignment explanation
Indices: 19486524--19487370 Score: 1346
Period size: 422 Copynumber: 2.0 Consensus size: 424
19486514 TGAAAACTCA
* * *
19486524 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCAGAAA
1 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTCGCTACCAGTAGCCAATAAAGTGTCAGAAA
* * *
19486589 TGTGGACAATTATTTCAAATGGTCACAAAATTTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
66 TGGGGACAATTATTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTT
*
19486654 GTGCATGCCAACAAAAATACAAGGATCGCATCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAA
131 GTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAA
**
19486719 AATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGAGTCATCT
196 AATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCATCT
** *
19486784 TGGCAAGAAACTTGACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTGATAAAAATGGC
261 TACCAAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTGATAAAAATGGC
* *
19486849 ATTGGCATGAAGAAATACGAAGATGTACCTAAACCCACCTACCATCCTATCGATCCACGGCTTGT
326 ATTGGCATGAAGAAATACGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
19486914 GCATTCCGTCTCTCTGGCCGGCGTAGTG-CCGCC
391 GCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCC
*
19486947 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTCGCTACCAGTAGCCAATAAAGTGTCTGAAA
1 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTCGCTACCAGTAGCCAATAAAGTGTCAGAAA
* * *
19487012 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGATCGAGTTTTTAG-TAGAATTTTTT
66 TGGGGACAATTATTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCT-GAATTTTTT
*
19487076 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CTTTCCAAA
130 TGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTT-CAAA
* * * *
19487140 AAAATTTT-AAAAATCCTGTACCGCAAAAAGTTTCCAAAATCATGAAAAATAAAAAATGAGTCGT
194 AAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCAT
*
19487204 CTTACCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG-GCATAAAAAC
259 CTTACCAAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTG-ATAAAAA-
* * * *
19487268 T-GCATTGGCATGCAGAAATAGGAAGATGTGCCTAAACGCACCTACCACCCTATCGATCCACGGC
322 TGGCATTGGCATGAAGAAATACGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGC
19487332 TTGCGCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCC
387 TTGCGCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCC
19487370 C
1 C
19487371 GCCAGCCCAC
Statistics
Matches: 389, Mismatches: 30, Indels: 10
0.91 0.07 0.02
Matches are distributed among these distances:
421 1 0.00
422 199 0.51
423 189 0.49
ACGTcount: A:0.33, C:0.21, G:0.19, T:0.27
Consensus pattern (424 bp):
CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTCGCTACCAGTAGCCAATAAAGTGTCAGAAA
TGGGGACAATTATTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTT
GTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAA
AATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCATCT
TACCAAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTGATAAAAATGGC
ATTGGCATGAAGAAATACGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
GCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCC
Found at i:19487593 original size:26 final size:26
Alignment explanation
Indices: 19487564--19487616 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19487554 GTTGACCTAG
*
19487564 GCATACGTAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
19487590 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19487616 G
1 G
19487617 ATCGGATCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.23, G:0.19, T:0.32
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19491590 original size:719 final size:719
Alignment explanation
Indices: 19490213--19491614 Score: 2174
Period size: 719 Copynumber: 1.9 Consensus size: 719
19490203 GCCCGCACGT
19490213 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGG
1 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGG
* ** * *
19490278 GTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTCTGTCGGGACACCA
66 GTTACAACAGCACATGCTAGGCTCGGGCATGTGCTAGTGCCGCATTTTTCTCTGTCGGGACACCA
* * * *
19490343 TCGTCGGAGCATCGCCTGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGA
131 TCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCCGGA
*
19490408 GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACGTGGCCCTTATATTGGCCCCCTATCCCT
196 GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACGTGGCCCTTATATTGGCCCCCCATCCCT
* * * *
19490473 CATCAAACCTCGAGAACTCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCAGT
261 CATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTCGAGATTTTACAGGTTTGCTGCCAGT
** **
19490538 AGCCGTTAAAGTGTCTGAAATGACGACAAATATTTCAAATGGTCACAAAATCTTGTACACTTCGA
326 AGCCAATAAAGTGTCTGAAATGACGACAAATATTTCAAATGGTCACAAAATCTTGTACACCACGA
* * *
19490603 GTTTTTAGCTAAAATTTTTGGTGCATGCCAACAAAAATACAAGGATCATGTCTTCCAAGTTTGGG
391 GTTTTTAGCTAAAATTTTTGGTGCATGACAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
* * *
19490668 GCCAAAATTCCTTCCAAAAAAATTTTAAAAAAACCCGAACCGTAAAAAGTTTCAAAAATCGTGAA
456 GCCAAAACTCCTTCCAAAAAAATTTTAAAAAAACCCCAACCGCAAAAAGTTTCAAAAATCGTGAA
*
19490733 AAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAACATTGTATGAAT
521 AAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAACATTGCATGAAT
* * *
19490798 TTATAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTTCCTAAAGCCACCTACCAC
586 TTACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTACCTAAACCCACCTACCAC
19490863 CCTATCGATCCACGGCTTCCGCATCCCGTCTCTTTCGTCGACGTAGTGCCCGTCCGCCTTCCCAC
651 CCTATCGATCCACGGCTTCCGCATCCCGTCTCTTTCGTCGACGTAGTGCCCGTCCGCCTTCCCAC
19490928 CCGC
716 CCGC
* **
19490932 TCGTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGA-CAGGATTGGA-CTGA
1 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA-GACCGGATC-GA
* *
19490995 GGGTTACAACAGCACATGCTAGGCTCGGGCATGTGCTAGTGTCGCATTTTTCT-TCG-CAGGGGC
64 GGGTTACAACAGCACATGCTAGGCTCGGGCATGTGCTAGTGCCGCATTTTTCTCT-GTC-GGGAC
* * *
19491058 ACCATC-CCAGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGCGGGGG
127 ACCATCGCC-GGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGG
*
19491122 CCCGG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCC
190 CCCGGAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACGTGGCCCTTATATTGGCCCCCC
19491186 ATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTCGAGATTTTACAGGTTTGCT
255 ATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTCGAGATTTTACAGGTTTGCT
** ** *
19491251 GCCAGTAGCCAATAAA-TAGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
320 GCCAGTAGCCAATAAAGT-GTCTGAAATGACGACAAATATTTCAAATGGTCACAAAATCTTGTAC
*
19491315 ACCACGAGTTTTTAGCT-GAATTCCTTT-GTGCATGACAACAAAAATACAAGGATCACGTCTACC
384 ACCACGAGTTTTTAGCTAAAATT--TTTGGTGCATGACAACAAAAATACAAGGATCACGTCTACC
* * *
19491378 AAGTTTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCCAACCGCAAAAAGTTTCAAA
447 AAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAACCCCAACCGCAAAAAGTTTCAAA
* * * *
19491443 AATTGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
512 AATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAACAT
* *
19491508 TGCATGAATTTACCAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTACCTAAACCC
577 TGCATGAATTTACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTACCTAAACCC
* *
19491573 ACCTACCACCTTATCGATCCACGGCTTGCGCATCCCGTCTCT
642 ACCTACCACCCTATCGATCCACGGCTTCCGCATCCCGTCTCT
19491615 CTGGCGGGCG
Statistics
Matches: 620, Mismatches: 54, Indels: 18
0.90 0.08 0.03
Matches are distributed among these distances:
718 11 0.02
719 597 0.96
720 12 0.02
ACGTcount: A:0.28, C:0.24, G:0.23, T:0.25
Consensus pattern (719 bp):
TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGG
GTTACAACAGCACATGCTAGGCTCGGGCATGTGCTAGTGCCGCATTTTTCTCTGTCGGGACACCA
TCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCCGGA
GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACGTGGCCCTTATATTGGCCCCCCATCCCT
CATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTCGAGATTTTACAGGTTTGCTGCCAGT
AGCCAATAAAGTGTCTGAAATGACGACAAATATTTCAAATGGTCACAAAATCTTGTACACCACGA
GTTTTTAGCTAAAATTTTTGGTGCATGACAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
GCCAAAACTCCTTCCAAAAAAATTTTAAAAAAACCCCAACCGCAAAAAGTTTCAAAAATCGTGAA
AAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAACATTGCATGAAT
TTACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTACCTAAACCCACCTACCAC
CCTATCGATCCACGGCTTCCGCATCCCGTCTCTTTCGTCGACGTAGTGCCCGTCCGCCTTCCCAC
CCGC
Found at i:19491851 original size:26 final size:26
Alignment explanation
Indices: 19491815--19491867 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19491805 GGTTGACTAG
19491815 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19491841 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19491867 G
1 G
19491868 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19492757 original size:26 final size:26
Alignment explanation
Indices: 19492720--19492772 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19492710 GTTGACTTAG
*
19492720 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19492746 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19492772 G
1 G
19492773 ATCAGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19494526 original size:26 final size:26
Alignment explanation
Indices: 19494496--19494548 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
19494486 GTTGACTTAG
19494496 GCATAC-AGAGTTCATTCCCAGTCTAA
1 GCATACGA-AGTTCATTCCCAGTCTAA
19494522 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19494548 G
1 G
19494549 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19495354 original size:309 final size:309
Alignment explanation
Indices: 19494795--19495395 Score: 1017
Period size: 309 Copynumber: 1.9 Consensus size: 309
19494785 CTTAAAGATA
* * *
19494795 ATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTTCGGAATGGGGACACTTTTTTC
1 ATTTGAGATTTTATAGGTTTACTGCCAGTAGCCATTAAAGTGTTCGAAATAGGGACACTTTTTTC
* *
19494860 AAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA
66 AAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAA
* * *
19494925 ATACAAGGATCATGTCCACCAAGTTTGGGACTACAACTCCTTCCGAAAAAATTTTAAAAAATCCC
131 ATACAAGGATCACGTCCACCAAGTTTGGGACCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
* * *
19494990 GAACCAGAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGGGTCGTCTTGCCATGAAACTTCAC
196 GAACCAGAAAAACTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
19495055 GTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGTGAAAAAAATGGC
261 GTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGTGAAAAAAATGGC
19495104 ATTTGAGATTTTATAGGTTTACTGCCAGTAGCCATTAAAGTG-TCTGAAATAGGGACACTTTTTT
1 ATTTGAGATTTTATAGGTTTACTGCCAGTAGCCATTAAAGTGTTC-GAAATAGGGACACTTTTTT
*
19495168 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAA
65 CAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAA
* * * *
19495233 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAGTCC
130 AATACAAGGATCACGTCCACCAAGTTTGGGACCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
*
19495298 CGAACC-GCAAAAACTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
195 CGAACCAG-AAAAACTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
19495362 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
259 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
19495396 CAAGCCATAA
Statistics
Matches: 273, Mismatches: 17, Indels: 4
0.93 0.06 0.01
Matches are distributed among these distances:
308 3 0.01
309 270 0.99
ACGTcount: A:0.36, C:0.17, G:0.18, T:0.29
Consensus pattern (309 bp):
ATTTGAGATTTTATAGGTTTACTGCCAGTAGCCATTAAAGTGTTCGAAATAGGGACACTTTTTTC
AAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAA
ATACAAGGATCACGTCCACCAAGTTTGGGACCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
GAACCAGAAAAACTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
GTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGTGAAAAAAATGGC
Found at i:19495739 original size:26 final size:26
Alignment explanation
Indices: 19495708--19495763 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
19495698 TTGGTTGACT
*
19495708 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGCTCATTCCCAGTC
* *
19495734 TAAGCATATGGAGCTCATTGCCAGTC
1 TAAGCATACGGAGCTCATTCCCAGTC
19495760 TAAG
1 TAAG
19495764 ATTGTACAAG
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.29, C:0.23, G:0.21, T:0.27
Consensus pattern (26 bp):
TAAGCATACGGAGCTCATTCCCAGTC
Found at i:19496039 original size:136 final size:136
Alignment explanation
Indices: 19495789--19496045 Score: 379
Period size: 136 Copynumber: 1.9 Consensus size: 136
19495779 GGGTTGCGGC
*
19495789 AGCACATGCTGGGCTCGGGCATGTGCTGGTGTCAAATTTTTCTTCATCAGGGCACCATCGCCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCATCAGGGCACCATCGCCGGA
* * * *
19495854 GCATCGCCGTAGAGCCTGACCGACGGCATTAGGGTTCCGACGATTGGGGGGACCAGATAGAGATT
66 GCATCGCCGGAGAACCTGACCGACGGCATTAAGGTTCCGACGATCGGGGGGACCAGATAGAGATT
19495919 TACGGT
131 TACGGT
*** * * *
19495925 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTGTTTTTCTTCGTCGGGGCACCATCGTCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCATCAGGGCACCATCGCCGGA
* * * *
19495990 GCATCGCCGGAGAACCTGACCGGCGGCATTAAGGTTTCGATGATCGGGGGGGCCAG
66 GCATCGCCGGAGAACCTGACCGACGGCATTAAGGTTCCGACGATCGGGGGGACCAG
19496046 GGGGGTGTGC
Statistics
Matches: 106, Mismatches: 15, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
136 106 1.00
ACGTcount: A:0.18, C:0.25, G:0.35, T:0.23
Consensus pattern (136 bp):
AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCATCAGGGCACCATCGCCGGA
GCATCGCCGGAGAACCTGACCGACGGCATTAAGGTTCCGACGATCGGGGGGACCAGATAGAGATT
TACGGT
Found at i:19496710 original size:26 final size:26
Alignment explanation
Indices: 19496680--19496732 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19496670 GTTGACTTAG
19496680 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19496706 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19496732 G
1 G
19496733 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19497616 original size:26 final size:26
Alignment explanation
Indices: 19497580--19497632 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19497570 GTTGACTTAG
19497580 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19497606 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19497632 G
1 G
19497633 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19498500 original size:26 final size:26
Alignment explanation
Indices: 19498470--19498548 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
19498460 GTTGTCTTAG
*
19498470 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19498496 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19498522 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19498548 G
1 G
19498549 ATCAGACTAG
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.27, C:0.25, G:0.20, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19502910 original size:26 final size:26
Alignment explanation
Indices: 19502874--19502926 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19502864 GTTGACTTAG
19502874 GCATACAGAGTTAATTCCCAGTCTAA
1 GCATACAGAGTTAATTCCCAGTCTAA
* *
19502900 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTAATTCCCAGTCTAA
19502926 G
1 G
19502927 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTAATTCCCAGTCTAA
Found at i:19503808 original size:26 final size:26
Alignment explanation
Indices: 19503766--19503818 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19503756 GTTTACTTAG
* *
19503766 GCATACGGTGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19503792 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19503818 G
1 G
19503819 ATCAGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.23, G:0.23, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19504691 original size:26 final size:26
Alignment explanation
Indices: 19504654--19504706 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19504644 GTTGACTTAG
19504654 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19504680 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19504706 G
1 G
19504707 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19505595 original size:26 final size:26
Alignment explanation
Indices: 19505559--19505608 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
19505549 GACTTAGGCA
*
19505559 TACGGTGTTCAATCCCAGTCTAAGCG
1 TACGGAGTTCAATCCCAGTCTAAGCG
*
19505585 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGTTCAATCCCAGTCTAAG
19505609 ATTGGATCAA
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.24, C:0.26, G:0.22, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCAATCCCAGTCTAAGCG
Found at i:19506054 original size:900 final size:897
Alignment explanation
Indices: 19501754--19513341 Score: 15187
Period size: 899 Copynumber: 13.0 Consensus size: 897
19501744 AACCCACATA
*
19501754 CCGTCTCTCTAGCCGACGT-AGTGACC-GCCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
1 CCGTCTCTCTGGCCGACGTAAGTG-CCTGCCC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* ** * ** * * **
19501817 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGATTGAGGGCTGTAGTAGCAAGATCGATAG
64 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAG
** * ** * * *
19501882 CACACAGAGGGGGACCTGGCCGATCCCCAACTTGCTCATCCCGCCCCTCTGGACGGCTGTGC-CC
129 CACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
** * * *
19501946 TCGCACGCTCGTTTCGTTCGTTGACTTCGGCAAACGGAGTTCATTCCCAATCTAAGCATACGGAG
194 -CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* * * * **
19502011 TTCATACCCAGTCTAAGATCAGACCAGACCGAAGGTTGCGGCAGCACATGCTGGGCTCGGTAATG
258 TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATG
* ** *
19502076 TGCTGGTGCCGCATTTTTCTTCGTCGGGGTGCCATCGTCTGAGCATCGCCGGAGAACCTGACCGG
323 TGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGG
*
19502141 CGGCATTGGGGTTCCTACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
388 CGGCATTGGGGTTCCGACGATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
*
19502206 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAGTCACACCCCCTTAAA
452 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* *
19502271 GAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTT
517 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
19502336 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-
582 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * * ** *
19502400 AAAAGATACAAGGTTAACATCTAAAAAAGTTTGGGGCCAAAAATCCTTCCAAAAAAATTTTAAAA
647 AAAA-ATACAAGGATCACGTCT-ACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTAAAA
** *
19502465 AATTCCGAACCGCAAAAAGTTTTGAAAAT-GATGAAAAGTAGAAAACGAGTCGTCTTGCCATGAA
709 AA-TCCGAACCGCAAAAAGTTTCAAAAATCG-TGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* *
19502529 ACTTCACGTGAAGGCTTATGGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
772 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
*
19502594 CAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
837 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * * *
19502655 CCGCCCCTCTGGCC-AGCGTAA-TGCCCGCCCGTCCGTCCGGTCGTTTCGTCGG-TGGCTTAGGC
1 CCGTCTCTCTGGCCGA-CGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * ** * * * *
19502717 ATACGGAGTTCATTCCTAGTCAAAGATCGGACTGGACCAAGGGTTGTGGTAGCAGGATCGACAGC
65 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGC
* * * *
19502782 ACGTAGAGGGGGACCCCGCTGATCCCCGACTTGCGCATCCCACCCCTCTGGCCGGCTGAGCGCCC
130 ACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* * *
19502847 GCACGTTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTAATTCCCAGTCTAAGCATACGGAGTT
195 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * *
19502912 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTATGACTGGACATGCTGGGCTCGGGCATGTG
260 CATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTG
* * * * * ** * * *
19502977 CTGGTGTCGCATTTTTCTTCGTCGAGGCACCATCGTCGGAGCATTGTCAAAAAACCTGACTGACG
325 CTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCG
* *
19503042 GCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATATGCGATGGGTGCTGGC
390 GCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
19503107 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
455 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
*
19503172 CATTTGAGATTTTACATGTTTGCTGCCAGTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
520 CATTTGAGATTTTACAGGTTTGCTGCC---AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* *
19503237 TTTCAAATGGTTACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTT-TGCATGCCAAC
582 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * * **
19503301 AAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAATTTTTAGGAAA
647 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC-CAAAAAATTTTAAAAAA
* * * *
19503366 TCCCAAACTGCAAAAAGTTTCAAAAATCGTAAAAAATGGAAAACGAGTCGTCTTGCCATGAAACT
711 T-CCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
*
19503431 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAG
775 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
19503496 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
840 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
*
19503554 CCGTCTCTCTGACCGACGTAA-----T----GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * * *
19503610 TACGGAGTTTATTCCCAGTCTAAGATCAGACCAGACCGAGTGCTGCAGCAGCAGGATTGGCAGCA
66 TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCA
* * * * *
19503675 CGTCGAGGGGGACCCGGCCGATCCCCAGCTTACGCATCCTGCCCCTCTGGCTGGCTGAG-GCCCC
131 CGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG-CCC
* * * *
19503739 GCACCCTCGTTTCGTGGGTTTACTTAGGCATACGGTGTTGATTCCCAGTCTAAGCATACGGAGTT
195 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * ** * *
19503804 CATTCTCAGTCTAAGATCAGACTGGACTGAGGGTTACGGCAACACATGCTGGGCTCGGGCATGTG
260 CATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTG
* ** * * *
19503869 CTGGTGTCACATTTTTCTTCACCGAGGCACCATCGTCGAAGCATCGCCGGAGAACCTGACCGACG
325 CTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCG
* * * * *
19503934 ACATTGGGGTTCCGACAATCGGGGGGTC-GGGGGTGTGCGCACATGATGTGCGGTGGGTGCTCGT
390 GCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* * *
19503998 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACGCCCCCTTAAAGGG
455 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
*
19504063 CATTTGA-ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTT
520 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
19504127 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
585 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
* **
19504192 AATACAAGGAT-AAGATCTAAAAAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAT
650 AATACAAGGATCACG-TCT-ACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTAAAAAAT
** * *
19504256 CCTGAACCGCAAAAAGTTTTGAAAATTGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTT
712 CC-GAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * *
19504321 CACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCTTTGGCATGTAGA
776 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
* *
19504386 AATATGAAGATGTGCCTAAACCCACCTGCAACCCTATCGATCCACGGCTTGCGCATC
841 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
** * * * *
19504443 CCGTCTCTCTGGCCGGTGT-AGTGCCCGCCCGCCCGTCCGCTCGTTTCGTCGATTGGCTTAGTCA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * *
19504507 TACAGAGTTCATTCCCAGTATAAGATCGAACCAGACCGAGGGTTGTGGCAGCAGGATTGGCAGCA
66 TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCA
* * * *
19504572 CGCAGAGGGGGACCCGACCAAT-----G--T--GCATCCCGCCCCTCTAGCCGGCTGAGCGCCCG
131 CGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
* *
19504628 CACGCTCATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTC
196 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
* * * ** * *
19504693 ATTCCCAGTCTAAGATCGGACCGGACCGATGGTTACAGCAAAACATGCTAGGCTCGAGCATGTGC
261 ATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGC
* * * * * * * *
19504758 TGGTGTCACATTTTTCTTTGTCAGGGCACCATCGCCGAAGCATCGTCGGAGAACCTGACCGACGA
326 TGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGG
** *
19504823 TGTTGGGGTTCCGGCGATCGGGGGAGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
391 CATTGGGGTTCCGACGATCGGGGG-GCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
*
19504888 AGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
455 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
* *
19504953 CATTTGAGATTTTACAGGTCTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA-ACTTCTTT
520 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
* * *
19505017 GAAATGTTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
585 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
* * ** * *
19505082 AATACAAGGATAACATCTAAAAAAGTTTGGGGCCAAAACCCCTTCCAAAAAAATTTAAAAAATCC
650 AATACAAGGATCACGTCT-ACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAATTTTAAAAAAT-C
* * * *
19505147 CAAACCGTAAAAAGTTTCAAAAAACATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
713 CGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* * *
19505212 CGTTAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCATAAA
778 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
* * * * *
19505277 TATAAAAATGTGCCTAAACCCACCTACCATCCTATCGATCCACGGCTTACACATC
843 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
19505332 CCGTCTCTCTGGCCGACGTAATGCCTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
1 CCGTCTCTCTGGCCGACGTAA-G--TGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * ** * *
19505397 GCATATGGAGTCCATTCCCAGTCTAAGATCGGATCAGATTGAGGGTTGCGGCAGCAAGATTGGCA
63 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCA
* * ** * * * *
19505462 GCACATAGAGTGGGACCCAACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCAGGTTGAGCCC
128 GCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* * * *
19505527 CCACACGCTCGTTTCGTGGGTTGACTTAGGCATACGGTGTTCAATCCCAGTCTAAGCGTACGGAG
193 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* * * * * *
19505592 TTCATTCCCAGTCTAAGATTGGATCAAACCGAGGCTTGCGGCAACACATGCTGGGCTCGGGCATG
258 TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATG
* * *
19505657 TGCTGGTGTCACA-TTTTCTTC-ACTGGGGCACCATCGTCGGAGCATCGCCGGAAAACCTGACCG
323 TGCTGGTGCCACATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCG
* * * * * *
19505720 GCGGCATTGGGGTTCCGGCGATCGGGGGGCTGGGGGGTGTGTGCACATGATGTGTGGTGGGTGGT
387 GCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* *
19505785 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACATCGAGAACTGACACCCCCTTAAA
452 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* *
19505850 GAGCATTTGAAATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTT
517 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
19505915 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCGTGCCAA-
582 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * *
19505979 AAAAATACAATGATCACGTCTACCAAGTTTGGTGCCAAAACTCTTTCCAAACAAATTTTAAAAAA
647 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA-AAATTTTAAAAAA
* * * * *
19506044 TACGAAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACGAGCCGTCTTGCCATAAAACT
711 TCCG-AACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * * **
19506109 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAATATGGGATTGGCACACAG
775 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
19506174 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
840 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
** * * * * *
19506232 CCGTCTCTCTGGGTGGCGT-AGT---T-CCCGCCCGCCTGCTCATTTTGTCAGTTGGCTTAGGCA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* ** * ** *
19506292 TACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGGGTTATGGCAGCAGGATGGGCAGCA
66 TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCA
* * * * * * * ** *
19506357 CGCAGAGGGAGACCAGACCGATCCCCGACTTGCGCATCCTGCCCCTCTAGCCTACTGAGCACCCG
131 CGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
* *
19506422 CACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAGGCATACGGAGTTC
196 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
* * * * * * * * *
19506487 ATTCCTAGTCTGAGATCGGATCGGACTGAGGGTTGCAGCAGAACATACTGGGCTCGGGCATGTGC
261 ATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGC
* * * * * * * **
19506552 TGGTGTCACATTTTTCTTCATCAGGGCACCATCGCCGAAGCATCGCCAGAGAACCTGACTGATGG
326 TGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGG
* *
19506617 CATTGGGGTTCCGGCGATCGGGGGTGCCAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
391 CATTGGGGTTCCGACGATCGGGGG-GCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* * * *
19506682 AGTTGGGCTTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAG
455 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
19506747 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
520 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
* * * *
19506812 CAAATGGTCAAAAAATCTTGTACAGTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAA
585 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
* * *
19506877 AATAC-AGTGATCATGTCTACCAAGTTTGGTGCCCAAACTCCTTCCAAAAAAATTTTAAAAAATC
650 AATACAAG-GATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTAAAAAATC
* * * *
19506941 CAGAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCTTACCTTGAAACTTC
713 C-GAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
*
19507006 ACGTGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
777 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
* * * * *
19507071 ATATGAAGATGTGCCTAAACCCAGCTACCACCCTATCGATCAATGGTTTACGCATC
842 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * *
19507127 CCGTCTCTCTAGCCGACGTAA-AG-CTCGCCCGTCCGCCCGCTCGTTTTGTCAGTTGGCTTAGGC
1 CCGTCTCTCTGGCCGACGTAAGTGCCT-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * * *
19507190 ATACGGAGTTGATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTACGGCAGCAGGATTGGCAGT
65 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCA--
* * * * *
19507255 GCAC--AGAAGGGGACCCGGTCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCAGCTGAACGC
128 GCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* * *
19507318 CCGCACGCTCATTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAG
193 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* * * *
19507383 TTCATTCCCAGTCTAAGATCGAACCGGACCGAGGGTTGCGGCAGCACATGTTGGGCTCGGGCATG
258 TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATG
* * * * * *
19507448 TGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATTGCCGGAGCATCGTCGGAGAACCTAACCGG
323 TGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGG
* * * * *
19507513 CAGCATTAGGGTTCCGACAATCAGGGGGCCTAGGGGGGTGTGCCCACATGATGTGCGATGGGTGC
388 CGGCATTGGGGTTCCGACGATCGGGGGGCC--GGGGGGTGTGCGCACATGATGTGCGATGGGTGC
* *
19507578 TGGTACTTGGCCCTCATATTGG-CCCCTAATCCCACATCAAACCTCGAGAACTCACACCCCCTTA
451 TGGTACTTGGCCCTTATATTGGCCCCCT-ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* * *
19507642 AAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTACAGTGTCTGAAATTGGGACACT
515 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
*
19507707 TTTTTCAAATGGTCACAAAATCTTGTACACGTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
580 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
** * * *
19507772 ACAAAAATACAAGGATGTCGTCAACCAAGTTTGGGGCCAAAACACCTTTCGAAAAAATTTTAAAA
645 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCAAAAAATTTTAAAA
* * *
19507837 AATCTCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATA-TAAACTGAGTCATCTTGCCATGAA
709 AATC-CGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC-GAGTCGTCTTGCCATGAA
* * *
19507901 ACTTCACGTGAAGGCTTAAAGGACCATTGTATTAATTTACAAGCCATAAGAAAT-GCATTGGGAT
772 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA-AAATGGCATTGGCAT
* *
19507965 GAAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
836 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * **
19508027 TCGTCTCTTTGGCCGGCGT-AGTG-CT---CGCCCGCCCGCTCATTTTATCGGTTGGCTTAGGCA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * *
19508087 TACGGAGTTCATTCCCAGTCAAAGATAGGACCAGACCGAGGGTTGCGGTAGTAGGATCGGCAGCA
66 TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCA
* ** * * * * *
19508152 CGGAGAGGGGGTGCCGGCCGATTCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTAAGCACCTG
131 CGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
19508217 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---
196 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
* *
19508275 ------A--C------C-G----GACCGAGGGTT-CTGGCAGAACATGTTGGGCTCGGGCATGTG
261 ATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTAC-GGCAGCACATGCTGGGCTCGGGCATGTG
* * * * * *
19508320 CTGGTGCCACATTTTTCTTCATCGGGGCACCATTGCCGGAGCATCACCGGAGAACCTAACCGGCA
325 CTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCG
* * * * * *
19508385 GCATTAGGGTTCCGGCAATCGGGGGGCCTAGGGGGTGTACCCACATGATGTGCGATGGGTGCTGG
390 GCATTGGGGTTCCGACGATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGG
* * * *
19508450 TACTTGGCCCTCATTTTGGCCCCTTATCCCACATCAAACCTCGAGAACTCACACCCCCTTAAAGA
454 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* *
19508515 GCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATTGGGACACTTTTT
519 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
19508580 TCAAATGGTCACAAAATCTTGTACACGTCGAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAACAA
584 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
* * *
19508644 AAATACAAGGATCATGTCTGCCAAGTTTGGGGCCAAAAATCCTTCCAAAAAAATTTTAAAAAATC
649 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTAAAAAAT-
* * *
19508709 CCGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCACGAAACTTC
712 CCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* * * *
19508774 ACGTGAAGGCTTAAAGGACCATTGCATGAATTTACAAGCCATAAAAAAGGAATTGGCATGCAGAA
777 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
19508839 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
842 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * *
19508895 CCGTCTCTCTGGCCAACGT-AGTGCCCGCCCACCCGCCCGCCCGCTCGTTTCTTCGGTTGGCTTA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTG----CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * * ** *
19508959 GGCATACGGAGTTCATTCCCAGCCTAAGATTGAACTGGACCGAGGGTTGCAGG-AGCAGGATTGG
62 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGC-GGCAGCAGGATCGG
* * * *
19509023 CAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCTCGCCCCTCTAGCCGGCTAAGC
126 CAGCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
* * * *
19509088 GGCCGCACGGTCGTTTCGTGGGTTAACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGA
191 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGG
19509153 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCA
256 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCA
* *
19509218 TGTGCTGGTGTCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACC
321 TGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACC
* * * *
19509283 GGCGGCATTGGGGTTTCGGCGGTCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGCG
386 GGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
*
19509348 CTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
450 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
19509413 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
515 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* * * *
19509478 TTTTTCAAATGGCCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTTTGTGCAAGCCA
580 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * * *
19509543 ACAAAAATACAAGGATCACGTCTACAAACTTTGGGGCCAAAAATCGTTTCGAAAAAATTTTAAAA
645 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC-CTTCCAAAAAATTTTAAAA
** * *
19509608 AATTTTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAA
709 AA-TCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
*
19509673 CTTCAGGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
773 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* *
19509738 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGACTTGCGCATC
838 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * ** * **
19509798 CCATCTCTCTGGCGGACGT-A--G--T----GCCCGCCCGCTTATTTCATAAGTTGGCTTAGGCA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * *
19509854 TACGGAGTTCATTCCCAGTCTAAGATTGGACC-GAACCAGATCAGGGGTTGCGTCAACAGCATCG
66 TACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACC-G---A-GGGTTGCGGCAGCAGGATCG
* * * *
19509918 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCTGGCTGAG
125 GCAGCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * *
19509983 CGCCTGCACGCTCGTTTCGTGGGTTGACTAAGGCATACGGAGTTCATTCCCAGTCTAAGCATTCA
190 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* ** * *
19510048 GAGTTCATTCCCATTCTAAGATCGGACCAGACCGACTGTTGCGGCAGCACATGCTGGGCTCAGGC
255 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
* * * *
19510113 TTGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGAAGAACCTGAC
320 ATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGAC
* *
19510178 CGGCGGCATTGGGGTT-CGACGATCAGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
385 CGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* * *
19510242 TTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCACACCCCCCTA
450 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
19510307 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
515 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* *
19510372 TTTTTCAAATGGTCAGAAATTCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTTT-TGCATGCC
580 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-TTTTTTGTGCATGCC
*
19510436 AGA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAATTTTAAA
644 A-ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAATTTTAAA
** ** * *
19510500 AAATCTCGAACCATAAAAAGTTTTGAAAATCGTGACAAATAGAAAATGAGTCGTCTTGCCATGAA
708 AAATC-CGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* * * *
19510565 ACTTCATGTGAAGGCTTAACGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
772 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
* * *
19510630 CAGAAATATGAAGATGTG-CTAGAACCCACATGCCACCCTATCGATCCACGGCTTGTGCATC
837 CAGAAATATGAAGATGTGCCTA-AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* *
19510691 CCGTCTCTCTGGCCGACGT-A--G--TGCCCGCCCGCCCGCTTGTTTCATCGGTTGGCTTAGGCA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * * * **
19510751 TACAGAGTTCACTCCCAGTCTAAGATGGGACACA-ACTGAGGGTTGCAGTAGCAGGATCGATAGC
66 TACGGAGTTCATTCCCAGTCTAAGATCGGAC-CAGACCGAGGGTTGCGGCAGCAGGATCGGCAGC
** * * * *
19510815 ACGTAG-TCGGG---CGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCTGGCTGAGCGCCC
130 ACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* * ** *
19510876 GCACG-TGGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTTGTCTAAGCTTACGGAGTT
195 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
** * *
19510940 CATTCCCAGTCTAAGATCGGACCAGACCGACAGTTGCGGCAGCACATGCTGGGCTCGAGCATGTG
260 CATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTG
* * ** ** * *
19511005 CTGGTGCCACATTTTTCTTTGTCGGGGCACCGTCACCGGAGCATCATCGGAGAACTTGACCGACG
325 CTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCG
*
19511070 GCGTTGGGGTTCCGACGATCGGGGGG-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
390 GCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* * * * *
19511134 ACTTGGCTCTTATACTGGCCCCCAATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAGAGAG
455 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
19511199 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
520 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
* *
19511264 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTACATGCCAAAAAA
585 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
* * *
19511329 AATACAAGGATCATGTCTACCAAGTTTGGGG-CAAAACTCATTGCAAAAAATTTT------T---
650 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAATTTTAAAAAATCCG
**
19511384 -A----AAAAA---TC----A---TGAAAAATAGAAAACGAGTCGTCTTGTAATGAAACTTCACG
715 AACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
* * * *
19511434 TGGAGGCTTAAGGGACAATTGTATGAATTTACAAGACATAAAAATGGCATTGGCATGCAAAAATA
780 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATA
* *
19511499 TGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATC
845 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * * * *
19511552 CTGTCTCTCTGTCCGGCGT-AGTGCCCGCCCGCCCGTCTGCCCGCTTGTTTCATCAGTTGGCTTA
1 CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCG-CC--C-GCCCGCTCGTTTCGTCGGTTGGCTTA
* ** * **
19511616 GGCATACGGAGTTCATTCCTAGTCTAAGATTAGACCGGATGGAGGGTTGCGGCAGCAGGATCGGC
62 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGC
* * * * * *
19511681 AGCAAGCAGAGGGGGACCAGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCT
127 AGCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * *
19511746 TCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCGTTCCCA-T-T---C-TA---A
192 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* *
19511802 G---A-T--C-G----A-A-C---CGA-ACCGAGGGTTACGGTAGCACATGCTGGGCTCGGGCAT
257 GTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCAT
** * * **
19511850 GTGCTGGTGCCGTATTTTTCTTCGTCAGGGCACCATCGTAGGAGCATCATCGGAGAACCTGACCG
322 GTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCG
* * *
19511915 GCGGCATTGGGGTTTCGGCGATCGGGGGGCC-GGGGGTGTGCGCACATGATGTGCGATGCGTGCT
387 GCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
*
19511979 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAACCCCTTAAA
452 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
*
19512044 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACATTTT
517 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
19512109 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
582 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* *** *
19512174 AAAAATACAAGGATCACGTCTTCCAAGTTTGGGAAAAAAACTCCTTTCGAAAAAATTTTAAAAAA
647 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCAAAAAATTTTAAAAAA
* ** * *
19512239 TCCTGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGACTCGTCTTGCCATGAAACT
711 TCC-GAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * * *
19512304 TGACGTGAAGTCTTAAGGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAA
775 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
* *
19512369 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATTCACGGCTTGCGCATC
840 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* *
19512427 CCGTCTCTCTGGCCGACGT-AGTGACC-GCCCGCCCGCTCGGCCGCTCGATTCATCGGTTGGCTT
1 CCGTCTCTCTGGCCGACGTAAGTG-CCTGCCCGCCCG--C--CCGCTCGTTTCGTCGGTTGGCTT
* ** * **
19512490 AGGCATACGAAGTTCATTCCTTGTCTAAGGTCATACCAGACCGAGGGTTGCGGCAGCAGGATCGG
61 AGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGG
* * * * * * * *
19512555 CAGCACATAGAGAGGGACCCCGCCGATCCTCGGCATACGCATCCCGCCCCTCTGGCCGACTGAGA
126 CAGCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
* * * *
19512620 GCCCTCACGCTCATTTCGTGGGTTCACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAG
191 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGG
* * * *
19512685 AGTTCATTCCAAGTCTATGATCGGATCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCAGGCA
256 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCA
* * * *
19512750 TGTGCTAGTGCCACTTTTTTCTTTGTCGGGGCACCATCGTTGGAGCATCGCCGGAGAACCTGACC
321 TGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACC
* *** *
19512815 GACGGCATTAATGTTCTGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
386 GGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
*
19512880 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTA
450 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* * * *
19512945 AATAGCATTTGAGA-TTTACAGGTTTGCTGTCAGTAGCTATTAAAGCGTCTGAAATGGGGACACT
515 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
*
19513009 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGCCA
580 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * *
19513074 ACAAAAATACAAAGATCATGTCTACCAAGTTTGGGGCC-AAACATTCTTCCGTAAAAATTTTAAA
645 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-TCCTTCC-AAAAAATTTTAAA
* * ***
19513138 AAGTCTCGAACCGTAAAAAGTTTTGGAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
708 AAATC-CGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* * *
19513203 ACTTCACATAAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
772 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
*
19513268 TAGAAATATGAAGATGTGCCTAAACCCA-CTACCACCCTATCGATCCACGGCTTGCGCATC
837 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
*
19513328 CCGTCTCTTTGGCC
1 CCGTCTCTCTGGCC
19513342 ATTAAAGTGT
Statistics
Matches: 9444, Mismatches: 1022, Indels: 442
0.87 0.09 0.04
Matches are distributed among these distances:
848 363 0.04
849 10 0.00
850 12 0.00
852 1 0.00
853 1 0.00
854 1 0.00
856 1 0.00
858 1 0.00
859 1 0.00
861 159 0.02
862 4 0.00
863 1 0.00
864 1 0.00
865 12 0.00
866 2 0.00
867 6 0.00
868 260 0.03
869 291 0.03
870 133 0.01
871 6 0.00
872 3 0.00
873 47 0.00
874 38 0.00
875 348 0.04
876 194 0.02
877 5 0.00
878 1 0.00
880 3 0.00
881 3 0.00
883 1 0.00
884 2 0.00
886 27 0.00
887 509 0.05
888 315 0.03
889 428 0.05
890 235 0.02
891 235 0.02
892 603 0.06
893 384 0.04
894 475 0.05
895 256 0.03
896 459 0.05
897 169 0.02
898 133 0.01
899 898 0.10
900 849 0.09
901 410 0.04
902 766 0.08
903 378 0.04
904 4 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (897 bp):
CCGTCTCTCTGGCCGACGTAAGTGCCTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCA
CGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
ATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGC
TGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGG
CATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA
ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAATTTTAAAAAATCCGA
ACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATAT
GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
Found at i:19506481 original size:26 final size:26
Alignment explanation
Indices: 19506445--19506497 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19506435 TGGGTTGACT
19506445 TAGGCATACGGAGTTCATTCCCAGTC
1 TAGGCATACGGAGTTCATTCCCAGTC
*
19506471 TAGGCATACGGAGTTCATTCCTAGTC
1 TAGGCATACGGAGTTCATTCCCAGTC
19506497 T
1 T
19506498 GAGATCGGAT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.23, C:0.25, G:0.23, T:0.30
Consensus pattern (26 bp):
TAGGCATACGGAGTTCATTCCCAGTC
Found at i:19507383 original size:26 final size:26
Alignment explanation
Indices: 19507347--19507399 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19507337 GTTGACTTAG
19507347 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19507373 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19507399 G
1 G
19507400 ATCGAACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19509148 original size:26 final size:26
Alignment explanation
Indices: 19509119--19509171 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19509109 GTTAACTTAG
*
19509119 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19509145 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19509171 G
1 G
19509172 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19510935 original size:26 final size:26
Alignment explanation
Indices: 19510905--19510954 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
19510895 GACTTAGGCA
**
19510905 TACGGAGTTCATTCCTTGTCTAAGCT
1 TACGGAGTTCATTCCCAGTCTAAGCT
19510931 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGTTCATTCCCAGTCTAAG
19510955 ATCGGACCAG
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.22, C:0.24, G:0.20, T:0.34
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCTAAGCT
Found at i:19512687 original size:26 final size:26
Alignment explanation
Indices: 19512651--19512701 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
19512641 GTTCACTTAG
* *
19512651 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
19512677 GCATACAGAGTTCATTCCAAGTCTA
1 GCATACAGAGTTCATTCCAAGTCTA
19512702 TGATCGGATC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.25, G:0.18, T:0.27
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCAAGTCTAA
Found at i:19513643 original size:360 final size:360
Alignment explanation
Indices: 19512983--19513702 Score: 1194
Period size: 360 Copynumber: 2.0 Consensus size: 360
19512973 GTCAGTAGCT
19512983 ATTAAAGCGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
1 ATTAAAGCGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * **
19513048 TTAGCTTAATTTTTTTGTGCATGCCAACAAAAATACAAAGATCATGTCTACCAAGTTTGGGGCCA
66 TCAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAAGATCACATCTACCAAGTTTGGGGCCA
* * * * * * * *
19513113 AACATTCTTCCGTAAAAATTTTAAAAAGTCTCGAACCGTAAAAAGTTTTGGAAATCGTGAAAAAT
131 AACATCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGAAAAAAGTTTCGAAAATCCTAAAAAAT
* *
19513178 AGAAAACGAGTCGTCTTGCCATGAAACTTCACATAAAGGCTTAAGGGACCATTGTATGAATTTAC
196 AGAAAACGAGTCGTCTTGCCATGAAACTTCACATAAAGGCTTAAGGGACCATTCTATGAATTCAC
*
19513243 AAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCA-CTACCACCCTA
261 AAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTA
*
19513307 TCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCC
326 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
*
19513342 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
1 ATTAAAGCGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
19513407 TCAGCTAAATGTTTTTTGTGCATGCCAACAAAAATA-AAAGGATCACATCTACCAAGTTTGGGGC
66 TCAGCTAAAT-TTTTTTGTGCATGCCAACAAAAATACAAA-GATCACATCTACCAAGTTTGGGGC
* * *
19513471 CAAA-ACTCCTTTCGAAAAAATTTTAAAAAATCTTGAAGCGAAAAAAGTTTCGAAAATCCTAAAA
129 CAAACA-TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGAAAAAAGTTTCGAAAATCCTAAAA
* *
19513535 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTATGAATT
193 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATAAAGGCTTAAGGGACCATTCTATGAATT
19513600 CACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCAACCTACCACC
258 CACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCAACCTACCACC
19513665 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
323 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
19513703 GGCGCATTGG
Statistics
Matches: 335, Mismatches: 22, Indels: 6
0.92 0.06 0.02
Matches are distributed among these distances:
359 76 0.23
360 214 0.64
361 45 0.13
ACGTcount: A:0.34, C:0.21, G:0.18, T:0.27
Consensus pattern (360 bp):
ATTAAAGCGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
TCAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAAGATCACATCTACCAAGTTTGGGGCCA
AACATCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGAAAAAAGTTTCGAAAATCCTAAAAAAT
AGAAAACGAGTCGTCTTGCCATGAAACTTCACATAAAGGCTTAAGGGACCATTCTATGAATTCAC
AAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTA
TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
Found at i:19515187 original size:26 final size:26
Alignment explanation
Indices: 19515151--19515203 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19515141 GTTCACTTAG
19515151 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19515177 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19515203 G
1 G
19515204 ATTAGATCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19516074 original size:26 final size:26
Alignment explanation
Indices: 19516038--19516093 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
19516028 TGGGTTGACT
* *
19516038 TAAGGATACGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGTTAATTCCCAGTC
19516064 TAAGCATACGGAGTTAATTCCCAGTC
1 TAAGCATACGGAGTTAATTCCCAGTC
19516090 TAAG
1 TAAG
19516094 AGCGGATCGA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.27
Consensus pattern (26 bp):
TAAGCATACGGAGTTAATTCCCAGTC
Found at i:19516408 original size:892 final size:888
Alignment explanation
Indices: 19514679--19519380 Score: 6095
Period size: 892 Copynumber: 5.3 Consensus size: 888
19514669 CACACCCCCT
* * * *
19514679 TGCCAATAAAAATAAAAGCATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
1 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTT
* * * *
19514744 TAAAAAATC-CCAAACGTAAAAAGTTTCAAAAATCATGAAAAATATAAAACGAGTCGTCTTGCCA
66 TAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
* * *
19514808 TGAAACTGCATGTGAAGGCTTAAGAGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
131 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
*
19514873 CATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
196 CACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * *
19514938 CCGTCTCTCTGGCCAGCGTAGTGCCCGCCCACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
261 CCGTCTCTCTGGCGA-CGTAGTGCCCGCCCGCTCATTTTGTCGGTTGGCTTAGGCATACGGAGTT
* * * * * *
19515003 CATTCCTAGTCTAAGATCAGACCGGATCGAGGGTTGTCGCAGCAAGATTGACAGCACACAGAGGG
325 CATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGGG
* * * * *
19515068 GGGCCCGATCGATCCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGTTAAGTGCCCGCACACTCG
390 GGACCCGACCGATCCC-C-GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACACTCG
* * *
19515133 TTTCTTTGGTTCACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
453 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
** * ** * * *
19515198 TCTAAGATTAGATC-AGATCGAGGGTTATGGTGGCACATGCTGGGCTCGAGCATGTGCTGGTGCT
518 TCTAAGATCGGATCGA-ACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
* * * * ** *
19515262 GCATTTTTCTTCACCGGGGCACCATCACCTGACCTTCGTCGAAGAACCTGACCGACGGCATTGGG
582 GCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGACCGAC-GCATTGGG
**
19515327 GTTCCGGTGATCGGGGGGCCGGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTGGC
646 GTTCCGACGATCGGGGGGCCGGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTGGC
** *
19515392 CCTTATATTGGCCCAATATCCCTCACCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
711 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
*
19515457 GATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
776 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
*
19515522 TCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCA
841 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* *
19515570 TGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAATCCTTTC-AAAAATATT
1 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAA-ATT
* ** * * *
19515634 TTAAAAAATCTCGAACCACAAAAAGTTTTGAAAATCTTAAAAAATAGAAAACGAGTCGGCTTGCC
65 TTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
* * * *
19515699 CTGAAACTTCACGTGAAGGCTTAATGGACCATTGTTTGAATTTACAAGCCATAAAAATGGTATTG
130 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * * * * *
19515764 GCATGGAGAAATATGAAGATGTGCCTAAACCCTCCTACCACCCTATTGATCCACAGCTTGTGCAT
195 GCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
*
19515829 CCCGTCTCTCTGGCGACGTAGTGCCCGCCCGCTCATTTTGTCGGTTGGCTTAGGCATACGAAGTT
260 CCCGTCTCTCTGGCGACGTAGTGCCCGCCCGCTCATTTTGTCGGTTGGCTTAGGCATACGGAGTT
* *
19515894 CATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCGATAGCACGCAAAGGG
325 CATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGGG
* * * *
19515959 GGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCATATTCGT
390 GGACCCGACCGATCCCC-GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACACTCGT
*
19516024 TTCGTGGGTTGACTTAAGG-ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTAATTCCCAG
454 TTCGTGGGTTGACTT-AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
* * * *
19516088 TCTAAGAGCGGATCGAACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTTCTGGTGTCG
518 TCTAAGATCGGATCGAACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCG
* * * *
19516153 TATTTTTCTTCGCCAGTGCACCATCACCGGAGCATCACCGGAGAACCTGACCGACAGCATTAGGG
583 CATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGACCGAC-GCATTGGGG
* * * * *
19516218 TTCCGACGATCGGGTGGGCTGAGGGGTGTGTGCGCACATGATGTGCGATGGGTACTGGTACGTGG
647 TTCCGACGATCGGG-GGGCCG-GGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTGG
* *
19516283 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGACCTCACACCCCTTTAAAGAGCATTTG
710 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* * *
19516348 AGATTTTTCAGGTTTGCTGCCAGTAGCGATTAAAGTGTCTGAATTGGGGACACTTTTTTCAAATG
775 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
*
19516413 GTCACAAAATCTTGCACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
840 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * *
19516462 TGCTAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGACAAAACTACTTTCGAAAAAATTT
1 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTT
* * *
19516526 TAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGTAAACGAGTCGTCTTGCCA
66 TAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
* *
19516591 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATTAATTTGCAAGCCATAAAAATGGCATTGG
131 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
* * * *
19516656 CATGCAGAAATATGAAGATGTGCCAAAACCCAACTACCACCCTATCGATCCACGGCTTACGCATC
196 CACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * *
19516721 CCGTCTCTCAGGCCGACGTAGTGCCCGCCCGCTCGTTCGTTTCATCGGTTGGCTTAGGCATACGG
261 CCGTCTCTCTGG-CGACGTAGTGCCCGCCCGCTC-AT--TTT-GTCGGTTGGCTTAGGCATACGG
* * * *
19516786 AGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTATGGTAGCAGGATC-AGTAGCACGCA
321 AGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCGA-CAGCACGCA
** * * * * * *
19516850 GAGAAGGACCCGACCGGTGCCCGGCTTGTGCATCCCGCCCCTCTGGCTGGCTGAGTGCCCGCACG
385 GAGGGGGACCCGACCGAT-CCCCGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACA
* * *
19516915 TTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGAAGTTCATTC
449 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
* * * *
19516980 CCAGTCTAAGATCGAACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
514 CCAGTCTAAGATCGGATCGAACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * ** * * *
19517045 GCCACATTTTTCTTCGTCAAGGCACCATCCCCGGAG-A--ACC--TG-ACCTG--CG--GCATCG
579 GCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGACCGACGCATTG
* * * * * * *
19517100 GGTTTTCGGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATATGCGGTGGGTGCTAGTACTTG
644 GGGTTCCGACGATCGGGGGGCCGGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTG
*
19517165 GCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
709 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
*
19517230 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATTGGGACACTTTTTTCAAAT
774 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
** *
19517295 GGTCTTAAAATCTTGTACACTTCGAGGTTTTAGCTGAATTTTTTTGTGCA
839 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * * * * *
19517345 TGCCAAAAAAAATACAAGGATCACCTCTACAAAGTTTGGGACAAAAACTCC-CTCTGAAAAAATT
1 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTC-GAAAAAATT
* * * *
19517409 TTGAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
65 TTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
* *
19517474 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCACAGAAATGGCATTG
130 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * **
19517539 GCACACAGAAATATGAAGATGTGCCAAAACCCATGTACCACCCTATCGATCCACGGCTTGCGCAT
195 GCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
* * * * * *
19517604 CCCGTTTCTCTAGCTGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACG
260 CCCGTCTCTCTGGC-GACGTAGT----GCCCGCCCGCTCATTTTGTCGGTTGGCTTAGGCATACG
* * * * *
19517669 GAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGCAGCAGGATCAACAGCACGCA
320 GAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCGACAGCACGCA
* * * *
19517734 GAGGGGGACCTGGCCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACT
385 GAGGGGGACCCGACCGATCCCCG-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACA
* *
19517799 CTAGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-TA---AG---A-T-
449 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
19517850 -C-G-----GA-C----CGAACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGT
514 CCAGTCTAAGATCGGATCGAACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * * *
19517903 GCCACATTTTTCTTTGTCGGGGCACCAT--------C--C-CCGGAGAACCTGACCGGTA-ACAT
579 GCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGACC-G-ACGCAT
* * ***
19517956 TGGCGTTCCGACGATCGGGGGGGCAGGGGGGGTGTACGCACATGATGCATGATGGGTGCTGGTAC
642 TGGGGTTCCGACGATC-GGGGGGCCGGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTAC
* * * * * * *
19518021 TTGGCCCCTATATTGGCCCCCTATCCCTCATCAAAGCTCAACAACTCACACTCTCTCAAAGAGCA
706 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
* *
19518086 TTTGAGATTTTACAGGTTTGCTGTCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
771 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
* * *
19518151 AATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGTTGAATTTTTTTATGCA
836 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * * *
19518204 TGGCAAAAAAAATACGAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTC-AAAAAAGTT
1 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAA-TT
* * *
19518268 TTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCATCTTGCC
65 TTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
* *
19518333 ATGAAACTTCACGTGAAGGCTTAATGGACCATTGTATGAATTTACAAGCCATAAAAAAGGCATTG
130 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * * * *
19518398 GCACACAGAAAGAAGAAAGATGTGCCTAAACTCACCTACCACCCTATCGATCCACAGCTTGCGCA
195 GCACGCAGAAATATG-AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* *
19518463 ACCCGTCTCTCTGGCCGATGTAGTGCCCACCCCCCCGCCCGC-CTACTCGTTTCGTCGGTTGGCT
259 TCCCGTCTCTCTGG-CGACGTAGTG--------CCCGCCCGCTC-A-T--TTT-GTCGGTTGGCT
* * * *
19518527 TAGGCATACGGAGTTCATTCCCAATCGAAGATCTGACCAGATCGAGGGTTGTGGCAGTAGGATCG
310 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCG
* * * * * *
19518592 ACAGCACGCAGAGAGGGACCTGACCGATCCTCGACTTACGCATCTCGCCCCTCTGGTCGGCTGAG
375 ACAGCACGCAGAGGGGGACCCGACCGATCCCCG-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * *
19518657 CGCCCGCACGCTCATTTCGTTGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACG
439 CGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * *
19518722 GAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTTCGGTGGCACATGCTGGGCTCGGGC
504 GAGTTCATTCCCAGTCTAAGATCGGATCGAACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGC
* * * ** **
19518787 ATGTGCTGGTGCCGTATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGAC
569 ATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGAC
* * *
19518852 CGACGACATTGGGGTTCC-AGTGATCGGGAGGGCCGGGGGGGTGTCCGCACATGATTTGCGATGG
634 CGACG-CATTGGGGTTCCGA-CGATCGGG-GGGCCGGGGGGGTGTACGCACATGATGTGCGATGG
* *
19518916 GTGCTGGTGCTTGGCCCTTATCTTGGCCCCCTATCCCTCATCAAACCAT-GAGAACTCACACCCC
696 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAACTCACACCCC
*
19518980 GTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
760 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
* * * * *
19519045 CATTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCAAATTTTTAGCTGAAGTTTTTTGTGCA
825 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * * * *
19519109 TGCTAACAAAAACAAAAGGATCACGTATACCAAG-TTGGGGCCAAAACTCCTTCCGAAAAAATTT
1 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTT
* * * *
19519173 TAAAAAATCTTGAACCGTAAAATGTTTCAAAAATCATGAAAAATAGTAAACGAGTCGTCTTGCCA
66 TAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
* *
19519238 TGAAACTTCACGTGACGGCTTAAGGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTGG
131 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
* * ** * *
19519303 CACCCATAAATATGAAGATGCACCTAAACCCACTTACCACCCGATCGATCCACGGCTTGCGCATC
196 CACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
19519368 CCGTCTCTCTGGC
261 CCGTCTCTCTGGC
19519381 CGGAGTAGTG
Statistics
Matches: 3328, Mismatches: 388, Indels: 179
0.85 0.10 0.05
Matches are distributed among these distances:
850 2 0.00
852 1 0.00
853 5 0.00
855 1 0.00
856 2 0.00
858 91 0.03
859 386 0.12
860 63 0.02
861 1 0.00
862 1 0.00
863 3 0.00
864 9 0.00
865 1 0.00
867 2 0.00
868 172 0.05
869 1 0.00
870 1 0.00
871 1 0.00
872 1 0.00
873 1 0.00
874 2 0.00
875 2 0.00
877 2 0.00
878 2 0.00
879 1 0.00
880 1 0.00
881 1 0.00
882 1 0.00
883 246 0.07
884 387 0.12
885 21 0.01
887 1 0.00
888 14 0.00
889 2 0.00
890 225 0.07
891 389 0.12
892 445 0.13
893 4 0.00
894 71 0.02
895 8 0.00
896 275 0.08
897 3 0.00
902 2 0.00
903 57 0.02
904 156 0.05
905 264 0.08
906 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (888 bp):
TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTT
TAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
CCGTCTCTCTGGCGACGTAGTGCCCGCCCGCTCATTTTGTCGGTTGGCTTAGGCATACGGAGTTC
ATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGGGG
GACCCGACCGATCCCCGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACACTCGTTT
CGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCT
AAGATCGGATCGAACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCAT
TTTTCTTCGCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGACCGACGCATTGGGGTTCC
GACGATCGGGGGGCCGGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
Found at i:19518725 original size:26 final size:26
Alignment explanation
Indices: 19518689--19518741 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19518679 GTTGACTTAG
19518689 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
19518715 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19518741 G
1 G
19518742 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19520257 original size:26 final size:26
Alignment explanation
Indices: 19520217--19520270 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
19520207 TGGGTTCACT
*
19520217 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
* *
19520243 TAAGCATATGAAGTTCATTCCTAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
19520269 TA
1 TA
19520271 TGATCGAACC
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.22, G:0.17, T:0.31
Consensus pattern (26 bp):
TAAGCATACGAAGTTCATTCCCAGTC
Found at i:19521148 original size:26 final size:26
Alignment explanation
Indices: 19521111--19521163 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19521101 GTTGACTTAG
*
19521111 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19521137 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19521163 G
1 G
19521164 ATCAGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19522032 original size:26 final size:26
Alignment explanation
Indices: 19522003--19522055 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19521993 GTTGACTTAG
*
19522003 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19522029 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19522055 G
1 G
19522056 GTCGGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19522745 original size:883 final size:883
Alignment explanation
Indices: 19519410--19527184 Score: 8859
Period size: 883 Copynumber: 8.9 Consensus size: 883
19519400 CCGTCCGACT
* * * *
19519410 CTCGGGCATGTGCTGGTCCCGCATATTTCTTCGTCGGGGCACAATCGTCGGAGCATCGTCTGAGA
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG---AACCATC---GCATCG---GAGA
* * *
19519475 ACCTGACCAGCGACATTGGGGTTCCGACGATC-GGGGGGCTGGGGGTGTGCGCACATGATGTGCG
57 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGTGTGCGCACATGATGTGCG
* *
19519539 ATGGTTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTAGAGAACTCACAC
122 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * * *
19519604 CCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTTCCAGTAGCCGTTAAAGTGCCTGAAATGG
187 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
19519669 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
252 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * * *
19519734 CATGCGAACAAAAATACAAGGATCACGTCCACCACGTTTGGGGCCAAAAATTCTTTT-GAAAAAC
317 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AAAACTCTTTTCGAAAAAA
* * * * * * *
19519798 TTTAAAAAAATCCCAAACCGTAAAAACTTTCGAAGATCGTGAAAAATAGAAATA-GAGTCGTCCT
381 TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAA-ACGAGTCGTCTT
* * *
19519862 GCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTATATGAATTTACAAGCCATAAAAATGGAA
445 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
**
19519927 TTGGC-ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTAT
510 TTGGCAAT--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
19519991 GCATCCCGTCTCTCTGGCTGGTGTGGTGCCCGCCCGCCCGCCCGCCCGTTTGTTTTGTCGGTTGG
573 GCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCCGCCCG--C--TCGTTTCGTCGGTTGG
* ** * * *
19520056 CTTAGGCATACGGAGTTCATTCCCAGTGTAAGATTGGATC-GTACCGAGGGTTATGGTAGCAGGA
630 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGTGGCAGCAGGA
*** * * * *
19520120 TCGGTTGCACGCAAAGGGGGA-TCCGACCGATCCCCGACTTGCGTACCCCGCCCCTCTGGCCGAC
694 TCGACAGCACGCAGAGGGGGACT-CGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGC
* * * * *
19520184 TGAGTGCCCTCACGCTCATTTCGTGGGTTCACTTAAGCATACGGAGTTCATTCCCAGTCTAAGCA
758 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * * * * *
19520249 TATGAAGTTCATTCCTAGTCTATGATCGAACCAGACCGAGGGTTGCGACAGCACATGCTGGG
823 TACGGAGTTCATTCCCAGTCTAAGATCGGACCA-ACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19520311 CTCGAGCATGTGCTGGTGTCGCTTTTTTCTTTGTCGGGGCACCATCGTTGGTGCATCGTCGGAGA
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCATC------GCA---TCGGAGA
* ** * * *
19520376 ACCTGACCGACGGCATTAAGGTTCCGATGATCGGGGGGCCGGGGGGTGTGCGCAGATGATGTGCG
57 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGTGTGCGCACATGATGTGCG
* * *
19520441 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATTCCTCATCAAACCTTGAGAACTCACAC
122 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
19520506 CCCCTTAGAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACCATTAAAGTGTCTGAAATGG
187 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
*
19520571 GGACACTTTTTTCAAATCGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
252 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * * *
19520636 CATGCCAGCAAAAATACAAGAAACACATC-ACCAA-TATTGGGGCCAAAACTCCTTTT-GGAAAA
317 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGT-TTGGGGCCAAAACT-CTTTTCGAAAAA
*
19520698 ATTTTAAAAAAT-CCGAACCGCAAAAAGTTTCAAAAATCAT-AAGAAATAGAAAACGAGTCGTCT
380 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAA-AAATAGAAAACGAGTCGTCT
* **
19520761 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATATC
444 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * *
19520826 AATGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGTTTTC
509 ATTGGCA-ATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * * * *
19520891 GCATCCTGTCTCTTTGGCCGGTGTAGTGCCCACCCACCAGCCCGTTTCATCGGTTGGCTTAGGCA
573 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * *
19520956 TAC-GAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTATGGTAGCAGGATC-AGCAGC
638 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGA-CAGC
* * * * *
19521019 ACGTAGAGGGGGACCCGACCGATCCCCGGCTTGAGCATCCCGCCCCTCTGGCTGGCTGAGCGCCC
702 ACGCAGAGGGGGACTCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* *
19521084 GCACGTTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTT
767 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * ** * * *
19521149 CATTCCTAGTCTAAGATCAGATCGGACCGAGGGTTGAGGCAGGACATTCTGGG
832 CATTCCCAGTCTAAGATCGGA-CCAACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
19521202 CTCGGGCATGTGCTGGTGCCGTAATTTTCTTCGTCGAGGCAA-CATCGGGGCTCATCGGAGAACC
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCG-GGGAACCATC---G--CATCGGAGAACC
* * *
19521266 TGACCGGTGGCATCGGGGTTTCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGAT
60 TGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGG-CGGGGGGTGTGCGCACATGATGTGCGAT
*
19521331 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCC
124 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
*
19521396 CTTTAAAGAGCATTTGAGATTTTACAGG-TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
189 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
*
19521460 ACACTTTTTTCAAATGGTTCAC-AAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGC
254 ACACTTTTTTCAAATGG-TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * *
19521524 ATGCCAA-AAAAATACAAGGATCACGTCTTACCAAGTTTGGGACCAAAAACTCCTTCCGAAAAAA
318 ATGCCAACAAAAATACAAGGATCACGTC-TACCAAGTTTGGGGCC-AAAACTCTTTTCGAAAAAA
*
19521588 TTTTAAAAAATCCCGAACCGAAAAAAGTTTTCAAAAATCGTGAAAAATAG-AAACTGAGTCGTCT
381 TTTTAAAAAATCCCGAACCGCAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAAC-GAGTCGTCT
*
19521652 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCACAAAAATGGC
444 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
19521717 ATTGGCACGTAGAAATATGAAGATGTGCCAAAACCCACATACCACCCTATCGATCCACGGCTTGC
509 ATTGGCA-ATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
19521782 GCATCCCGTTTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGATTGGCTTAGGCA
573 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * **
19521847 TACGTAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCAGCAGCAGGATCGACAGCA
638 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCA
* * * *
19521912 CGCAGAGGGGGACTTGGCCGATCCCCGACTTGCGCATCCCACCCCTCTGGCCGGCTGAGCGCCTG
703 CGCAGAGGGGGACTCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
* * *
19521977 CACTCTAGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCATTCTAAGCATACGGAGTTC
768 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
* * *
19522042 ATTCCCAGTCTAAGGTCGGACCGAACCGATGGTTGCGGCAGCACATGCTAGG
833 ATTCCCAGTCTAAGATCGGACC-AACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
19522094 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGAACCATC-C-TCGGGGAACCTGACCA
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCATCGCATCGGAGAACCTGACCG
** * * * ***
19522157 GCAACAATGGGGTTTCGACGATCGGGGGGGCAGGGGGTGTGCGCACATGATGCATGATGGGTGCT
66 GCGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* * * * * *
19522222 GGTACTTGGCCCTTATATTGGCCCCCTATTCCTCATCAAAGCTTGACAACTCACACTCTCTTAAA
131 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* * *
19522287 GAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCAATTAAAGTGTCTGAAATAGGGACACTTT
196 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* *
19522352 TTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
261 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
*
19522417 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTAGAAAAAATTTTAAAAAA
326 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTCGAAAAAATTTTAAAAAA
*
19522482 TCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACT
391 TCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
19522547 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCCAATAG
456 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG-CAATAG
* * ** * *
19522612 AAAGATGAAGATGTGCCTAAACTCACCTACCACCCTATCGATCCACAACTTGCGCAACCTGTCTC
520 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * * * *
19522677 TCTGGCCGACGTAGTACCCGCCCGCCTGCTCGTTTTGTCGGTTGGCTTAGGCATACAGAGTTCAT
585 TCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * *
19522742 TCCCAGTCTAAGATCCGACCAGACTGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGAGGGA
650 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGGGGGA
* * * * * * *
19522807 -TCCGATCGATCCCCGACTTACGCATCTCGCCCCTCTGGTCGGTTGAGCTCCCGCACACTCGTTT
715 CT-CGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTT
** *
19522871 CGTTAGTTGACTTGGGCATACGGAGTTCATTCCCAG--T---C-TA---AG---A-T--C-G---
779 CGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCT
** *
19522917 --GATCGGA-C-A--GAGGGTTGCGGTGGCCCATGCTGGG
844 AAGATCGGACCAACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19522951 CTCGGGCATGTGCTGGTGTCGTATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCA---TC---GCAT---CGGAGA
* * * *
19523016 ACCTGACCGGCGACATTGGGGTTCC-AGTGATCGGGAGGGCCGAGGGGGGGTGTCCGCACATGAT
57 ACCTGACCGGCGGCATTGGGGTTCCGA-CGATCGGG-GGG--G-CGGGGGGTGTGCGCACATGAT
* * * *
19523080 TTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCACGAGAAAT
117 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
19523145 CACACCCCGTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAATGTGTCTGA
182 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * * * * *
19523210 AATAGGGACACTTTTTCCAAATGGTCACAAAATCTTGTACAGTTCAAATTTTTAGCTGAAGTTTT
247 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * * *
19523275 TTATGCATGCCAACAAAAAAACAAGGATAACGTATACCAAG-TTGGGGCCAAAACTCCTTCCGAA
312 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTCGAA
* * * *
19523339 AAAATTTTAAAAAATCCCGAACCGTAAAATGTTTCAAAAATCATGAAAAATAGTAAACGAGTCGT
377 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
19523404 CTTGCCATGAAGCTTCACGTGACGGCTTAAGGGACCATTTTATGAATTTACAAGCCATAAAAATG
442 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
** * * **
19523469 GCATTGGCACGCAGAAATATGAAGATATACCTAAACCCACCTACCACCCTATCGATCCACAACTT
507 GCATTGGCA-ATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * * * *
19523534 GCGCAACCTGTTTCTCTGGCCGACGTAGTACCCGCCCGCCTGCTCCTTTTGTCGGTTGGCTTAGG
571 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* *
19523599 CATACGGAGTTCATTCCCAGTCTAAGATCCGACCAGACTGAGGGTTGTGGCAGCAGGATCGACAG
636 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAG
* * * * * * *
19523664 CACGCAGAGAGGGA-TCCGATCGATCCCCGACTTACGCATCTCGCCCCTCTGGTCGGTTGAGCTC
701 CACGCAGAGGGGGACT-CGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* ** *
19523728 CCGCACACTCGTTTCGTTAGTTGACTTGGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
765 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* * * *
19523793 TTGATTCCCAGTCTAAGATCGGATCAGACTGAGGGTTGCGGCAGCACATGCTAGG
830 TTCATTCCCAGTCTAAGATCGGACCA-ACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** **
19523848 CTCGGGCATCTGCTGGTGTCGCATTTTTCTTCACCGGGGTGCCATCACCGGATCATCGTCGTAGA
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCAT---C-G--CATCG--G-AGA
* * * ** *
19523913 AGCTAACCGGCGGCATTGGAGTTCCGGTGATCGGGGGGGCCGGGGGGTGTGTGCGCGCATGATGT
57 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGG-C-GGGGG-GTGTGCGCACATGATGT
* * * *
19523978 ACGATGGGTGCTCGTACATGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
119 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
19524043 CA-CCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAA
184 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19524107 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTT
249 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19524172 GTGCAAGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTCCAAAAA
314 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTCGAAAA
* *** * ** *
19524237 AATTTTAAAAAATCCTGAATTACAAAAGGTTTTGAAAATCGTG--AAATAGAAAATGAGTCGTCT
379 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19524300 TGCCATGAAACTTAACGTGAAGGCTTAAAGGACCATTG---G-A-TTACAAGCCATAAAAATGGC
444 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
19524360 ATTGGC-ATGCAGAAATATGAAGATGTGCCTAAA-CCACCTACCA-CTTATCGTTCCA-TGCTTG
509 ATTGGCAAT--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
19524421 CGCAT-CAGTCTCTCT-GCCGGCGTAGTGCACGCTGCCGCCCGCCCGTCGTTTCAGTCGGTTGGC
572 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC--CCGCCCG--C-TCGTTTC-GTCGGTTGGC
**
19524484 TTAGGCATACGGAG-TCATTCCCAGTCTAAGAT-AG----GA--G-GGGTT-CAG-AGCAGGAT-
631 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATC
* * * *
19524537 --CAGCATGCAAAGGGGGAC-CGA-TGATCCCCGACTTGC-CAT-CCGCCCCTCT-GCC-GTTGA
696 GACAGCACGCAGAGGGGGACTCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * * * *
19524594 GCACCCGAATGCT-GTTTCGT-GGTTGACTT-CGAATACGGAGTTCACTCCCAGTCTAAGCATAC
761 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC
* * ** * *
19524656 AGAGTTCA-TCCCAGTCTAAGCGTCGG----GTCGAGGG-TGCGGTAGCACATGCTAGG
826 GGAGTTCATTCCCAGTCTAAG-ATCGGACCAACCGAGGGTTGCGGCAGCACATGCTGGG
* * * **
19524709 CTC-GGCATGTGCTGGTGCCG-ATTTTTC-T--TC-GGGAATCACCGACATGCGTAGAGGCT-A-
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCATCG-CAT-CGGAGAACCTGAC
* * * * *
19524766 CGACGCGCATTGGTGG-TCCG-CGATC-GCGGGGC--CGGGTGTGTGCAGCATGATGTGCAATGG
64 CGGCG-GCATTGG-GGTTCCGACGATCGGGGGGGCGGGGGGTGTGCGCA-CATGATGTGCGATGG
* * *
19524826 GTGCTCGTAACTTGGCCCCTATA-T---CCCCTATCCCTCATC-AACCTCGATAACTCACACCCC
126 GTGCTGGT-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
* *
19524886 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGACTGAAATGGGGA
190 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
19524951 CACTTTTTGT-AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
255 CACTTTTT-TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* *
19525015 TGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGACCAAAACTCTTTTCGAAAAAATTT
319 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTCGAAAAAATTT
* * * ** * *
19525080 TAAAAAATCCTGAACTGCAAAGAGTTTTGAAAATCCTGAAAAAATAGAAAATGAGTCGTCTTGCC
384 TAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTG-AAAAATAGAAAACGAGTCGTCTTGCC
* *
19525145 GTG-AA-GT-A-GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
448 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * * *
19525206 GCACACCAAAAATATGAAAATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTGCGCA
513 GCA-A-TAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * *
19525271 TCCCTTCTCTCTGGCCGGTGTACTGCCCGCCCGCCCGGCCGATCGTTTCGTCAGTTGGCTTAGGC
576 TCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCC-G-C--TCGTTTCGTCGGTTGGCTTAGGC
* * *
19525336 ATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGCAGC---AT-----GC
637 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGC
* * * *
19525393 A---A-AGGGGGAC-CCAGCCGATCCCTGACTTGCGCATCCCACCCCTCTAGCCGGCTGAGCGCC
702 ACGCAGAGGGGGACTCGA-CCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
19525453 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGT
766 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGT
*
19525518 TCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGG
831 TCATTCCCAGTCTAAGATCGGACCA-ACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * *
19525572 CTCAGGTATGTGCTGGTACTGCATTTTTTTTCATCGGGGCACCATTGCCGGAGCATCGTCGGAGA
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCA-T--C---GCA---TCGGAGA
* * * *
19525637 ACCTGACCGACGGCATTGGGGTTCCGGCGATCAGGGGGCCGGGGGG-GTGCGTGCACATGATGTG
57 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGTGTGC--GCACATGATGTG
*
19525701 CGATGGGTGGTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
120 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
19525766 ACCCCCATAAATG-GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
185 ACCCCCTTAAA-GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
19525830 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCAAGTTTTTA-CTTGAA-TATTT
249 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC-TGAATTTTTT
* * **
19525893 TGTACATGCCAACAAAAATACAAGGATAACGTCTACCAAGTTTGGGGCCAAAAC-CCCTTCGAAA
313 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTCGAAA
* * * * * * * * * *
19525957 ATATTTTAAAAAATCTCAAACCGCGAAAGGTTTCGAAAATCCTGAAAAAAAGAAAACGAGTCATG
378 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
19526022 TTGCCATGAAACTTCAC-TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCACAAAAATGG
443 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
19526086 CA-TGGCACAAAGAAATATGAAGATATGCCGAAACCCACCTACCACCCTATCGATCCACGGCTTG
508 CATTGGCA-ATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* ** * *
19526150 CGTATCCCGTCTCTCTGGCCAACGTAGTGCTCGCCCGCCAGCCCCCCCGCTCGTTTCGTCAGTTG
572 CGCATCCCGTCTCTCTGGCCGGCGTA--G-T-G--C-CC-GCCCGCCCGCTCGTTTCGTCGGTTG
** *
19526215 GCTTAGGCATATAGAGTTCATT-CCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCAGGA
629 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGA
* * * * * * * *
19526279 TCGACAGCACGTAGAGGGGTA-TAAGGCCGATCCCCGGCTTGTGCATCCCGCCCTTTTGGCCGGC
694 TCGACAGCACGCAGAGGGGGACT-CGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGC
* *
19526343 TGAGTGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-
758 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * *
19526402 TA---AG---A-T--C---C--A-ATCGG----ACCGAGGGTTGTGGTAGCAAATGCTGGG
823 TACGGAGTTCATTCCCAGTCTAAGATCGGACCAACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
19526444 CTTGGGCATGTGCT-GTGCCGCATTTTTCTTTGCCTGGGCACCATCGC-T-GGAGAACTTGACCG
1 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCATCGCATCGGAGAACCTGACCG
* * * *
19526506 GTGGCGTTGGGGTTTCGACGATCAGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
66 GCGGCATTGGGGTTCCGACGATC-GGGGGGGC-GGGGGGTGTGCGCACATGATGTGCGATGGGTG
* *
19526571 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAAGTCACACCCCCTTA
129 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
*
19526636 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACG
194 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* * * *
19526701 TTTTTCAAATAGACACAAAACCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTG-AGTGCC
259 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA-TGCC
*
19526765 AACAAAAATACAAGGATCACGTCT----A---------C----C-C-TTTCGAAAAAAATTTAAA
323 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTCGAAAAAATTTTAAA
* * *
19526811 AAATCCC-AATCCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGACTTGCCATGA
388 AAATCCCGAA-CCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* * *
19526875 AACTTCACGTGCAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGTATTGGCAC
452 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA-
* *
19526940 ACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCG
516 ATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
* *
19527005 TCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGATTGGCTTAGGCATACG
581 TCTCTCTGGCCGGCGTAGT----GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* ** * * **
19527070 GAGTTCATTCCCAGTCTAAGGTTTGATCAGACTGAGGGTTGTGGTTGCAGGATCGACAGCACGCA
642 GAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCACGCA
*** *
19527135 GAGGACAACCCGACCGATCCCC-AGCTTGCGCATCCCGCCCCTCTGGCCGG
707 GAGGGGGACTCGACCGATCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGG
19527185 TGGCATTGGG
Statistics
Matches: 5972, Mismatches: 670, Indels: 522
0.83 0.09 0.07
Matches are distributed among these distances:
837 36 0.01
838 235 0.04
839 2 0.00
840 10 0.00
841 51 0.01
842 80 0.01
843 111 0.02
844 87 0.01
845 61 0.01
846 132 0.02
847 46 0.01
848 32 0.01
849 2 0.00
850 16 0.00
851 6 0.00
852 15 0.00
853 3 0.00
854 17 0.00
855 17 0.00
856 11 0.00
857 103 0.02
858 14 0.00
859 8 0.00
860 49 0.01
861 215 0.04
862 58 0.01
863 23 0.00
864 15 0.00
865 9 0.00
866 13 0.00
867 42 0.01
868 45 0.01
869 16 0.00
870 18 0.00
871 465 0.08
872 272 0.05
873 4 0.00
874 17 0.00
875 4 0.00
876 24 0.00
877 22 0.00
878 12 0.00
879 13 0.00
880 20 0.00
881 30 0.01
882 29 0.00
883 474 0.08
884 257 0.04
885 335 0.06
886 93 0.02
887 184 0.03
888 148 0.02
889 100 0.02
890 48 0.01
891 457 0.08
892 283 0.05
893 3 0.00
894 59 0.01
895 155 0.03
896 147 0.02
897 95 0.02
898 96 0.02
899 3 0.00
900 183 0.03
901 100 0.02
902 239 0.04
904 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (883 bp):
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGAACCATCGCATCGGAGAACCTGACCG
GCGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTCGAAAAAATTTTAAAAAA
TCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAATAGA
AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
CTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
CCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGGGGGAC
TCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
GATCGGACCAACCGAGGGTTGCGGCAGCACATGCTGGG
Found at i:19523793 original size:26 final size:26
Alignment explanation
Indices: 19523757--19523809 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19523747 GTTGACTTGG
19523757 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19523783 GCATACGGAGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19523809 G
1 G
19523810 ATCGGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19524673 original size:25 final size:26
Alignment explanation
Indices: 19524626--19524676 Score: 86
Period size: 25 Copynumber: 2.0 Consensus size: 26
19524616 TTGACTTCGA
*
19524626 ATACGGAGTTCACTCCCAGTCTAAGC
1 ATACAGAGTTCACTCCCAGTCTAAGC
19524652 ATACAGAGTTCA-TCCCAGTCTAAGC
1 ATACAGAGTTCACTCCCAGTCTAAGC
19524677 GTCGGGTCGA
Statistics
Matches: 24, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
25 13 0.54
26 11 0.46
ACGTcount: A:0.29, C:0.29, G:0.18, T:0.24
Consensus pattern (26 bp):
ATACAGAGTTCACTCCCAGTCTAAGC
Found at i:19525517 original size:26 final size:26
Alignment explanation
Indices: 19525481--19525533 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19525471 GTTGACTTAG
19525481 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19525507 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19525533 G
1 G
19525534 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19527945 original size:26 final size:26
Alignment explanation
Indices: 19527909--19527961 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19527899 GTTGACTTAG
19527909 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
19527935 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19527961 G
1 G
19527962 ATCGGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19529698 original size:26 final size:26
Alignment explanation
Indices: 19529662--19529714 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19529652 GGTGACTTAG
19529662 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19529688 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19529714 G
1 G
19529715 ATTGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19531484 original size:26 final size:26
Alignment explanation
Indices: 19531454--19531532 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
19531444 GTTGACTTAG
19531454 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
19531480 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
*
19531506 GCACATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
19531532 G
1 G
19531533 ATCGGATTGG
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.27, C:0.24, G:0.20, T:0.29
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGTCTAA
Found at i:19534162 original size:26 final size:26
Alignment explanation
Indices: 19534123--19534178 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
19534113 GTGGGTGACT
* *
19534123 TAAGCATACAGAGTTCATTCCTAGTC
1 TAAGCATACAGAGTTAATTCCCAGTC
*
19534149 TAAGCATACGGAGTTAATTCCCAGTC
1 TAAGCATACAGAGTTAATTCCCAGTC
19534175 TAAG
1 TAAG
19534179 ATCGGATCAA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.32, C:0.21, G:0.18, T:0.29
Consensus pattern (26 bp):
TAAGCATACAGAGTTAATTCCCAGTC
Found at i:19535028 original size:26 final size:26
Alignment explanation
Indices: 19534992--19535044 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19534982 GTTGACTTAG
*
19534992 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19535018 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19535044 G
1 G
19535045 ATCGGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19537684 original size:25 final size:25
Alignment explanation
Indices: 19537650--19537699 Score: 82
Period size: 25 Copynumber: 2.0 Consensus size: 25
19537640 TTGACTTAGG
*
19537650 CATACGGAGTTCATTCCCAGTCTAA
1 CATACAGAGTTCATTCCCAGTCTAA
*
19537675 CATACAGAGTTCATTGCCAGTCTAA
1 CATACAGAGTTCATTCCCAGTCTAA
19537700 GATCGGACCG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.30, C:0.26, G:0.16, T:0.28
Consensus pattern (25 bp):
CATACAGAGTTCATTCCCAGTCTAA
Found at i:19537946 original size:904 final size:899
Alignment explanation
Indices: 19533365--19545560 Score: 14366
Period size: 904 Copynumber: 13.6 Consensus size: 899
19533355 GCATTTTTCT
* * * * * *
19533365 TCGCCGAAGAACCTGACCGACGGTATTAGGGTTCCGGCGATCGATGGGGCCGAGGGGGTCTGCGC
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCC--GGGGGTGTGCGC
* *
19533430 ATATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTTGCCCCCTATCCCTCATCAAACCTC
63 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
*
19533495 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAG
128 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
*
19533560 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTG
193 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* **
19533625 AATTTTTTTGTGCATGCCAAGAAAAATACAAGGATCACGTCTATAAAGTTTGGGGCCAAAACTCC
258 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * * **
19533690 TTTCGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTTAAAAAATTGTGAAAAATAGAAAA
323 TTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAG-TTTCAAAAATCATGAAAAATAGAAAA
*
19533755 CGAGTCGTCTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
387 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* * *
19533820 TAAAAATGCCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATC
452 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * * * *
19533885 CACAGCTTGGGCATCCAGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCCGCGCGCTTG
517 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CCC-CCGCCCGCCCGCCCGCTCG
* * * * * *
19533950 TTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCTA-TCTAGGATCAGACTAGACTGAGGAT
578 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC-AGTCTAAGATCGGACCAGAC-GAGGGT
* * *
19534014 TGCGGTAGCAGGATC-GATAGCACGCAGAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCGC
641 TGCGGCAGCAGGATCAG-CAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGC
* * * * * * * * *
19534078 CCCTCTAGCCGGCTGAACACCTGTACGATCGTTTTGTGGG-TGACTTAAGCATACAGAGTTCATT
705 CCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
* * * * * *
19534142 CCTAGTCTAAGCATACGGAGTTAATTCCCAGTCTAAGATCGGATC-AACCCAAGGGTTGCGGCAG
770 CCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGA-CCGAGGGTTGCGGCAG
* *
19534206 AACATGCTGGGCTCGGGCATGTGCTGGTGACGCATTTTTCTT---C---G------C-T------
834 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGC
19534252 A
899 A
* * *
19534253 ------GAGAACCTGACCGACGGCATTAGGGTTCCGATGATCGAGGAGGCCGGGGGGGTGTGCGC
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCC--GGGGGTGTGCGC
*
19534312 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTACATTGGCCCCCTATCCCTCATCAAACCTC
63 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
*
19534377 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAAAGGTTTGCTGCCAGTAGCCATTAAAG
128 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
* *
19534442 TCTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTG
193 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* *
19534507 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGTCAAAATTCC
258 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * *
19534572 TTCCGAAAAATTTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAAC
323 TTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAAC
19534637 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
388 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
19534702 AAAAATGGCATTGGCATGCAGAAGTATGAAGATGTGCCTAAACCCAGCTACCACCCTATCGATCC
453 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * *
19534767 ACGACTTTCACATCCCGTCTCT-TCGGCCAGCGTAGT-----------GCCCGCCCGCTCGTTTC
518 ACGGCTTGCGCATCCCGTCTCTCT-GGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTC
* * *
19534820 GTCGGTTGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCCGACAGAGGGTTGCGG
582 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC-GAGGGTTGCGG
* * * * *
19534885 CAGCAGGATC-GACAGCACGCAGA-GGGGACCCGACCGATCCTCGACTTTCGCATCCCACCCCTC
646 CAGCAGGATCAG-CAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * *
19534948 TGGCCGGCTGAGGGCTCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
710 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* * * *
19535013 TCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGAATCGAGGGTTACGACAGCACATG
775 TCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATG
* *
19535078 CTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGG---CA----C----CA
840 CTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
* * **
19535127 TCGCCGGAGAACCTGACTGTCGGCATTGGGGTTCCGATTATCGGCGGGGCCGGGGGTGTGCGCAC
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGG-GGGGCCGGGGGTGTGCGCAC
* * * ** **
19535192 ATGATGTGTGATGGGTGCTGGTACCTGGCCCATATATTATCCCCCTATCCCTCATCAAACCTTAA
65 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
19535257 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
130 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* * *
19535322 TCTGAAATGGAGACACTTTTTTCAAATGGTCAAAAAATCTTGTACACTTTGAGTTTTTAGCTGAA
195 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
*
19535387 TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTAGGGCCAAAAC-CCTT
260 TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * *
19535451 TCGAAGAAATTTTAAAAAAT-CTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
325 CCGAAAAAATTTTAAAAAATCCT-GAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
* *
19535515 AGTCGTCTTGCCATTAAACTTCACGTGAAGGCTTAAGGGACCATAGTATGAATTTACAAGCCATA
389 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
*
19535580 AAAATGGCATTGGCATGCAGAAATACGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
454 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * *
19535645 AGGCTTGCGCTTCCCGTCTCTCTGGCCGACGTAGTG---CTCGCCCGCTCGCCCGCTCGTTTCGT
519 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * * *
19535707 CGGTTCGCTTAGGCATACGGAGATCATTCCCAGTCTAAGATTGGACCGGACTGAGGGTTACGGTA
584 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC-GAGGGTTGCGGCA
* * ** * * * * *
19535772 GCAGGATC-GACAGTACACAGAGGGGGACCATGCTGATTCCCGGCTTGTGCATCCTGCCCCTTTG
648 GCAGGATCAG-CAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * *
19535836 GCCGACTGAGTGGCCGCACGTTCGTTTTGTGGGGTGACTTAGGCATACGGAGTTCATTCCCAG--
712 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
*
19535899 T---C-T--A-AG---------A---T----T-GGACCGGACCGAGGGTTGTC-GTAGCACATGC
777 TAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG-CGGCAGCACATGC
* * * *
19535939 TGGGCCCGGCCATGTGCTGGTGCCGCATTTTTCTTCCCCGGGGCACTATCGTCGGAGCA
841 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
* * *
19535998 TCGTCGGAGAACCTGATCGGCGGCATTGGGGTTCCGACGATCGAGGGGGCCGGGTAGGGTGTGCG
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCC-GG--GGGTGTGCG
*
19536063 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAGTGGCCCCCTATCCCTCATCAAACCT
62 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
19536128 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
127 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
*
19536193 GTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
192 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
* **
19536258 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCCACCAAGTTTGTTGCCAAAACTC
257 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
19536323 CTTCCGAAAAAATTTTAAAAAAT-CTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAA
322 CTTCCGAAAAAATTTTAAAAAATCCT-GAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAA
*
19536387 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAACC
386 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* ** *
19536452 ATAAAAATGACATTGGCACCCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
451 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * ** * * * *
19536517 CCACGGATTGCACATCCCGTCTCTCTGGAAGGCGTAGTGCCTGCCCGCCCGTCTGCCCACTCGTT
516 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCC-CCCCGCCCGCCCGCCCGCTCGTT
* * * * *
19536582 TCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCAAATCTAAGATCGAACC-G--GA-----CCG
580 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACGAGGGTTGCG
* * * * * * * * *
19536639 GCTGTAGGATCGGCAGTACACAGCGGGGGACCCGACCGATCCCCAGCTTG-GCATCCCGTCCCTC
645 GCAGCAGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * * * * * * *
19536703 TGGCCGGCTGAACGCCTGCACGTTCATTTCATGGGTTGACTTAGGCATATGAAATTCATTCCCAG
710 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* ** *
19536768 TCT-A--A-ACAGGAGTTCATTCCTAGTCTAAGATCTTACCGGACCGAGGGTTACGGCAGCACAT
775 TCTAAGCATACA-GAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACAT
* * ** *
19536829 GCTGGGCTTGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGAAGCA
839 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
* *
19536890 TCACCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCCC
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCC--GGGGGTGTGCGC
* ** *
19536955 ACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGTACCCTATCCCTCATCAAACCTA
63 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
*
19537020 GAGAACTCACACCCCCTTAAAGAGCATTTGACATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
128 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
19537085 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
193 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* *
19537150 AATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCC
258 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
** *
19537215 TTCCGAAAAAATTTTAAAAAAT-CTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAAC
323 TTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAAC
* * *
19537279 GAGTCGTCTTGCCATGAAACTTCGCGTGAAGGCTTGAGGGACCATTGTATGAATTTACAAGTCAT
388 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
19537344 AAAAATGGCATTGGCATGCAGAAATATTAAGATCTGCCTAAACCCACCTACCACCCTATCGATCC
453 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* ** * * * *
19537409 ATGGCTTGCGTGTGTCCCGTCTCTCTGGCCGGCGTAGTGCCCGTCCGCCCGCCCGTCTGCTCATT
518 ACGGCTTGC--GCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-CCCGCCCGCCCGCCCGCTCGTT
* * * *
19537474 TCGTCGATTGGTTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGAACCAGATCGAGGGTTGC
580 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CGAGGGTTGC
* * * * * **
19537539 GACAGTAGGATCAGCAGCACGTAGAGAGGGACCCGGCCGATCCCTGGCTTGCGCATCTTGCCCCT
644 GGCAGCAGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCT
* * ** *
19537604 CTAGTCGGCCAAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
709 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* *
19537669 GTCTAA-CATACAGAGTTCATTGCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGGCAGCACAT
774 GTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACAT
* *** *
19537733 GCTAGGCTCGGGCATGTGCTGGTGCAAAATTTTTCTTCACCGGGGCACCATCGTCGGAGCA
839 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
* * * *
19537794 TCGCCGGAGAACCTGACCGGCGGCATTGGGTTTCCGGCGATCAGGGGGGCCAGCGGGGTGTGCCC
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCC-G-GGGGTGTGCGC
*
19537859 ACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
63 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
* * * *
19537924 AAGAACTCACACCCCTTTAAAGACCATTTTAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
128 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
*
19537989 TGTCTGAAATGGGGACACTTTTTTCAAATGGCCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
193 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* *
19538054 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAGCAAGTTTGGGGCCAAAAATCC
258 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* *
19538119 TTCCGAAAAAATTTAAAAAAAAT-TTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
323 TTCCGAAAAAATTT-TAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
*
19538183 CGAGTCGTCTTGGCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
387 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* ** * *
19538248 TAAAAAGGGCATTGGCACACAGAAATATGAAAATGTGCCTAAACCCACCTACCACCCTACCGATC
452 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* *
19538313 CACGACTTGCGCATCCTGTCTCTCTGGCCGGCGTAGT-----------GCCCGCCCGCTCGTTTC
517 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTC
* * *
19538367 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATTGGACCAGAC--------CGGT
582 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACGAGGGTTGCGGC
* * * * * *
19538424 AGTAGGATCGGCAGCACACAG-GGGGGACCCGACCGATCCCCAGCTTACGCATCCCGCCCCTCTG
647 AGCAGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * * *
19538488 GCCGACTGAGTGCCCACACGCTAGTTTCGTGGGTTGACTTAGGCATATGAAATTCATTCCCAGTC
712 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* ** *
19538553 TAAGCATAC-GAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGATAGCACATTC
777 TAAGCATACAG-AGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGC
* *
19538617 TGGGCTCGGGCATGTGCTAGTGCCGCATTTTTCTTCGCCGAGGCACCATCG-CTGGAGCA
841 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTC-GGAGCA
* * * * *
19538676 TCGTCGGAGAACCTGACCGGCGACATTGAGGTTCCGACGATCGGGGGGGTCGGGAGGGGTGTGCG
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGG-C-CG-GGGGTGTGCG
** *
19538741 CACATGATGTGCGATGGGTGCTGGTACTTTATCCCTTATATTGGCCCTCTATCCCTCATCAAACC
62 CACATGATGTGCGATGGGTGCTGGTAC-TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
19538806 TTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
126 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* * * *
19538871 AGTGTCTAAAATGGGGACACTTCTTTCAAATGCTCACAAAATCTTATACACTTCGAGTTTTTAGC
191 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* **
19538936 TGAATTTTTTTTTGCATGCCAACAAAAATACAAGGATCACGTCT-CACAAGTTTGGTACCAAAAC
256 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC-CAAGTTTGGGGCCAAAAC
* ** ** *
19539000 TCCTTCTGAAAAAATTTTAAAAAATCCTGAACCACAAAAAGTTTTGAAAATCGTGAAAAATAGAA
320 TCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAA
* *
19539065 AACGAGTCGTCTTGCCATGAAACTTCATGTGAAAGCTTAAGGGACCATTGTATGAATTTACAAGC
385 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
*
19539130 CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGA
450 CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* ** * *
19539195 TCCACGGCTTGCGCATCCCATCAATCTGGCCGACGTA--G-CACCCGCCCGCCCGCCCGCTCGTT
515 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTT
* * * **
19539257 GCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACGGAGGGTTGC
580 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC-GAGGGTTGC
* * * *
19539322 -G-A-C----T-----GCATGCAGAGGGGGACCCGGCCGATCCCCGGTTTGTGCATCTCGCCCCT
644 GGCAGCAGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCT
* ** *
19539375 CTGGACGGCTGAGCGCCCGCACGCTCGTTTCAAGTGTTGACTTAGGCATACGGAGTTCATTCCCA
709 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
19539440 GTCTAAGCATACAGAGTTCATTTCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
774 G--T---C-T--A-AG--------CA---T-A-C--A--GAGTTCATTCCCAGTCTAAGATCGGA
* * *
19539505 CCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCG
813 CCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
19539570 CCGGGGCACCATCG-CTGGAGCA
878 CCGGGGCACCATCGTC-GGAGCA
* * * **
19539592 TCACCGAAGAACCTGACCGACAGCATTGGGGTTCCGGTGATC-----G--GGGGGTGTGCGCACA
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGTGTGCGCACA
* * * *
19539650 TCATGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTTGAG
66 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
19539715 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
131 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* * * * *
19539780 CTAAAATGAGGACACTTTTTTCAAATGCTCACAAAATCTTGTCCACTTCGATTTTTTAGCTGAAT
196 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * *
19539845 TTTTTTGTGCATGCCAACAGAAATCCAAGGATCATGTCTACCAAGTTTGGGGCCAAAA-TGCCTT
261 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CCTT
* * * * ** *
19539909 CGGAAAAAATTTTAAAAAATCCTAAACTGCAAAAAGTTTCAAAAATCATGAAAGTTAGAAACCGA
325 CCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
*
19539974 GTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
390 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* ** * *
19540039 AAAGGGCATTGGCACACAGAAATATGAAAATGTGCCTAAACCCACCTACCACCCTACCGATCCAC
455 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* *
19540104 GACTTGCGCATCCTGTCTCTCTGGCCGGCGTAGT-----------GCCCGCCCGCTCGTTTCGTC
520 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTCGTC
* * * **
19540158 GGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGAT------AG-GGTGGG-ACCGGCAGC
585 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACGAGGGTTGCGGCAGC
* * * *
19540215 AGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTTTGGCC
650 AGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
** *
19540280 TACTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGG----C---G-----T---A---T--
715 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
19540325 G------GAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCTGGG
780 GCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
19540384 CTCGGGCATGTGCTGGTGCCGTATTTTTTCTTCGTCGGGGCACCATCATCGGAGCA
845 CTCGGGCATGTGCTGGTGCCGCA-TTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
* * * * *
19540440 TCGTCGGAGAACCTGACCGGCGGCATTTGGGTTCTGGCGATC----GG--GGGGGTGTGCGCACA
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGTGTGCGCACA
*
19540499 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAAACCTCGAG
66 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
19540564 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
131 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* * * * *
19540629 CTAAAATGAGGACACTTTTTTCAAATGCTCACAAAATCTTGTCCACTTCGATTTTTTAGCTGAAT
196 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * *
19540694 TTTTTTGTGCATGCCAACAGAAATCCAAGGATCATGTCTACCAAGTTTGGGGCCAAAA-TGCCTT
261 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CCTT
* * * * ** *
19540758 CGGAAAAAATTTTAAAAAATCCTAAACTGCAAAAAGTTTCAAAAATCATGAAAGTTAGAAACCGA
325 CCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
*
19540823 GTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
390 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* * *
19540888 AAGTGGCATTGGCATGCAGAAATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCAT
455 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * * *
19540953 GGCTTGCACATCCCGTCTTTCTGGCAGGCGCAGTGCCTGCCCGCCCGTCCGCCCGCTCGTTTCGT
520 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCC-CCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * *
19541018 CGGTTGGCTTAGGCATACAGAGTTCATTCCTAGTCTACGATCGGACCGGATCGAGGGTTACGGCA
584 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CGAGGGTTGCGGCA
* * ** *
19541083 GCAGGATCAGCAGTACGTAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTTTGG
648 GCAGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * *
19541148 CCGACTGAGCGCCCGCACGCTCGTTTCGTAGGTTGACTTAGGCATACGGAATTCATTCCCAGTCT
713 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
** * * * * * *
19541213 AAGCATATGGAGTTCATTACCAGTCTAAGATTGGACCAGACAGAGGGTTGCAGCAGCACATGCTA
778 AAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTG
** * * * *
19541278 GGCTTAGACATGTGCTGGAGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCA
843 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
* * * *
19541335 TCGACGGAGAACCTGACCGACGACATTGGGGTTCTGGCGATCGGGGGGGCCTGGGGG-GTGCGCA
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCC-GGGGGTGTGCGCA
* * * * * * *
19541399 CATGATGTACAATGGTTGCTGGTACTTAGCACTTATATTGGCCACCTATCCCTCATCAAACCTTG
64 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
*
19541464 AGACCTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGGTTTGCTGCCAGTAGCCATTAAAG
129 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC-AGGTTTGCTGCCAGTAGCCATTAAAG
** *
19541529 TGTCTGGAAATGGGGACACTTTTTTCAAATGCTGGGGACAAAATCTTATACACTTCCGAGTTTTT
193 TGTCT-GAAATGGGGACACTTTTTTCAAA---TGGTCACAAAATCTTGTACACTT-CGAGTTTTT
* *
19541594 AGCTGAATTTTTTTTTTGCATGCCAA-AAAAATACAAGGATCATGTCTACCAAGGTTTGGGGCCA
253 AGCTGAA-TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAA-GTTTGGGGCCA
* * ** ** * * *
19541658 AAACTCCATCAGGAAAAAATTTTTAAAAAATCCCAAACCACAAGAAGGTTCGAAAATCATGAAAA
316 AAACTCCTTC-CGAAAAAA-TTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAA
* * * *
19541723 ATAAGAAAAACGAGTCATCTGGCCATTG-AACTTTCACCTGAAGGCATAAGGGACCATTGTATGG
379 AT-AG-AAAACGAGTCGTCTTGCCA-TGAAAC-TTCACGTGAAGGCTTAAGGGACCATTGTAT--
* * * *
19541787 GAAGTTACAAGCCCTAAAAATGGCCATTGGCACGTAG-AATATGAAGATGTGCCT-AACCCACCT
438 GAATTTACAAGCCATAAAAATGG-CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCT
* * * *
19541850 ACCCACCCGGATCGATCC-CGACTTGCGCCTCCCGTCTCTCTGGCCGGGCATAGTGCCCGCCCGC
502 A-CCACCC-TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC-GGCGTAGTGCCC-CCCGC
* * * * * * *
19541914 CCGTCCGCCCGTTCGTTTTGTCGGTTGGGTTAGGCATATGGAGTTCATTCCTAGTCTAAGATGGG
563 CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * * * * * *
19541979 ATCGGCCTGAGGTTTACGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGC
628 ACCAGAC-GAGGGTTGCGGCAGCAGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGC
* * ** * * * *
19542044 TTGCACATCCTGCCCCTCTGGCCAACTGAGCGCCCGCACTCTTGTTTCATGGGTTTACTTAGGCA
692 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
** * * *
19542109 TATAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCGAACCGA
757 TACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGA
* ** * * * *
19542174 GGGTTACGGCAGCACAACCTGGGGTCGAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCAC
822 GGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCAC
19542239 CATCGCTGGACCATCGCTGGAGCA
887 CAT--C--G----T--C-GGAGCA
** * **
19542263 TCATCGGAAAACCTGACCGACGGCATTGGGGTTCC-AGCGATTAGGGGGCCGGGGGGGTGTGTGC
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGA-CGATCGGGGGGCC---GGGG-GTGTGC
*
19542327 GCACATGATGTGCGATGGGTGCTGGTACCTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
61 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * * *
19542392 TTGAGAACACACACCCCCTTAAAGAGCATTTGAGATTTTTCAGGTTTGCTGCCAGTAGCCATTTA
126 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
19542457 AGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTTGC
191 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * * * ** *
19542522 TGAATTTTTTTGTGCGTGCCAACAAAAATTCGAGGATCACATCTACCAAGTTCAGGGTCAAAACT
256 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * *
19542587 CCTTCCGAAAAATTTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAACAGAAA
321 CCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAA
* *
19542652 ATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
386 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* * * * *
19542717 ATCAAAATGGCATTGGCAGGCAGCAATATGAAGTTGTGCCTAAACCGACCTACCACCCTATCGAT
451 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
** * * * * * *
19542782 CCACGGCTTGCTTATCCCATCTCTCTAGCCAGCGTAGTG---CCCGCCCGCTCGCCCACTCATTT
516 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTT
* * * *
19542844 TGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAAGGTTGCG
581 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC-GAGGGTTGCG
* * ** * *
19542909 GTAGTAGGAT-AGGCAGCACATAGAGGGGGACCCGGCCAATCCCCGGCTTGTGCATCCCGCCCCT
645 GCAGCAGGATCA-GCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCT
* * * * * * * *
19542973 CTGGTCAGCGGAGCACCGGCACGCTCGTTTCGCGGGTTGACTTAGGCTTACAGAGTTCATTCCCA
709 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * * *
19543038 GTCTAAGCGTACAGAGTTCATTCCCAATCTAAGATCGAACCAGACCGAGGGTTGCGGCAGCACAT
774 GTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACAT
* *
19543103 GCGGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTTGCCGGGGCACCA---T-----CA
839 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
* *
19543156 ---CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC----GG--GGGGTTGTGCGCACA
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGTGTGCGCACA
* * *
19543212 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCTTCAAACCTCAAA
66 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* * *
19543277 AACTCACACCCCCTTGAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAACTGT
131 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
*
19543342 CTGAAATGGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
196 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* *
19543407 GTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACCAAAACTCCTTC
261 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * ** * *
19543472 CAAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTTGAAAATCGTGAGAAATAGAAAACGAG
326 CGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
*
19543537 TCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
391 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * * * *
19543602 AATCGCATTGGCAAGTAGAAATATGAAGATGTGCCAAAACCCACCTACCACTCTATCGATCCA-G
456 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
** * * * * *
19543666 GCTTATGCATGCCGTCTCTCTAGCCGACGTAGTGCCCACCCGCCCGTCCGCCTGCCTGCTTGTTT
521 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-CCCGCCCG--C-CC-GCCCGCTCGTTT
* * * *** *
19543731 CGTCGATTGGCTTAGGTATACGGAGTTCATTCCCAGTCTAAGATGGGATTGGACCGAGGGTTGTG
581 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CGAGGGTTGCG
* ** *
19543796 GCAGCAGGATCAACAGCACGCAGA-GGGGACCCATCC-ATCCTC-GCTTGTCTAGGTACGAGTTC
645 GCAGCAGGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTG-C---G--C-A--TC
* * *
19543858 CCAGTCCCATTCTCTAGCGGCGGCTGAGTGCTCGCATATCGCTCAGTTTCGATGGGTTGACTATA
701 CC-G-CCC---CTCT-G-GCCGGCTGAGCGCCCGC--A-CGCTC-GTTTCG-TGGGTTGACT-TA
* * *
19543923 TGGCGTACGGATGTTTCATTCACCAGT-TAAAGCATGGCAAGGGATTTCGATTCACCAGTCTAAG
753 -GGCATACGGA-G-TTCATTC-CCAGTCT-AAGCAT-AC-A--GAGTTC-ATTC-CCAGTCTAAG
* * *
19543987 CATGCGAACCAGGGCC-ATCGAGGTTAAAGCGGCGAGCGTCTTGCAGAACATACGTGGGCTCATG
807 -AT-CGGACC-GGACCGA--G-GGTT---GCGGC-A-------GC---ACATGC-TGGGCTC--G
* ** * * *
19544051 TAGTTTAAAGCATGTGCTGTTGCCTAAATCCTTTATCTTCGCTCGGGTCACAAT-GCCGGGAG-A
849 --G------GCATGTGCTGGTGCC-GCAT--TTT-TCTTCGC-CGGGGCACCATCGTC-GGAGCA
*
19544114 --G-CGGAGAACCTGA-CGAC-GCATT-GGGTTTCGACGATCAGGGGGGGCCGGGGGGGTGTGCG
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC--GGGGGGCC--GGGGGTGTGCG
* *
19544173 CACATGATGTGCAATGGGTGCTGCGTAC-TGGCCCTTTTATTGGCCCCCTATCCCTCATCAAACC
62 CACATGATGTGCGATGGGTGCTG-GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* *
19544237 TCGAGAACCTCACACCCCCTTAAAGAGCATTTGAGATTTTAAAGG-TTGCTGCCAGCAAGCCATT
126 TCGAGAA-CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG-TAGCCATT
* *
19544301 CAAAGTGTCTGAAAT-GGGACACCTTTTTC-AATTGTCACAAAATCTTGTACACTTCGAGTTTTT
189 -AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
19544364 AGCTGAATTTTTTT-TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
253 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
** *
19544428 ACAT-CTTCC-AAAAAATTTTTAAAAAATCCCAAACCATAAAAAGTTTCAAAAATCATG-AAAAT
318 AC-TCCTTCCGAAAAAA-TTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAAT
* * *
19544490 AGAAAACGAGTCATCTTGCCATGAAACTTCACATG-A-GCTTAA--GACCGTTGTATGAATTTAC
381 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
*
19544551 AAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTA
446 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * * *
19544616 TCAATCCA-GGCTTGTGCATGCCGTCTCTCTAGCCGGCGTAGTGCCCACCCGCCCGCCCGCCCGC
511 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-CCCGCCCGCCCGCCCGC
* * *
19544680 TCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATGGGATCAGACCGAGG
575 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CGAGG
* * * *
19544745 GTTGTGGCAGCAGGATC-GACAGCACGCTGAGGGGGACCCGGTCGATCCCCGACTTGCGCATCCC
639 GTTGCGGCAGCAGGATCAG-CAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCC
* * *
19544809 GCCCCTCTGGCTGGCTGAACGCCCGCACGCTCTTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
703 GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* *
19544874 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACA
768 TTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * *
19544939 ACACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGCGGCACCATCGCCAGAG
833 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAG
19545004 CA
898 CA
**** * * * * * *
19545006 TCATTAGAGAACCTGACCGACGGCATTGGAGTTCTGGCAATCGGGGGGGCGGGGGGGTGCGCACA
1 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGTGTGCGCACA
**
19545071 TGATGTGTAATGGGTGCTGGTACTTGGCCCTTATATTCGG-CCCCTATCCCTCATCAAACCTCGA
66 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT-GGCCCCCTATCCCTCATCAAACCTCGA
* *
19545135 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTGGCCATTAAAGTG
130 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* * * *
19545200 TTTGGAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
195 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * *
19545265 TTTTTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACACCTT
260 TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * *** *
19545330 CC-AAAAAATTTTTAAAAAATCCCGAACCGAAAAAAGTTTTGGAAATCATGAAAAATAGAAAACA
325 CCGAAAAAA-TTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
*
19545394 AGTCGTCTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
389 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* * *
19545459 AAAATGGCATTGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACTCTATCGATCCA
454 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* *
19545524 CGACTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGC
519 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
19545561 GCACATGATG
Statistics
Matches: 9817, Mismatches: 1085, Indels: 799
0.84 0.09 0.07
Matches are distributed among these distances:
847 76 0.01
848 62 0.01
849 486 0.05
860 62 0.01
861 57 0.01
863 1 0.00
865 61 0.01
866 205 0.02
867 4 0.00
868 1 0.00
869 69 0.01
870 145 0.01
871 47 0.00
872 4 0.00
873 1 0.00
874 253 0.03
875 221 0.02
876 1 0.00
877 213 0.02
878 257 0.03
879 89 0.01
880 461 0.05
881 272 0.03
882 499 0.05
883 52 0.01
884 421 0.04
885 100 0.01
886 98 0.01
887 82 0.01
888 9 0.00
889 7 0.00
890 291 0.03
891 356 0.04
892 295 0.03
893 74 0.01
894 131 0.01
895 185 0.02
896 192 0.02
897 6 0.00
898 20 0.00
899 85 0.01
900 99 0.01
901 74 0.01
902 171 0.02
903 68 0.01
904 866 0.09
905 219 0.02
906 10 0.00
907 33 0.00
908 40 0.00
909 43 0.00
910 22 0.00
911 41 0.00
912 282 0.03
913 18 0.00
914 35 0.00
915 14 0.00
916 237 0.02
917 379 0.04
918 20 0.00
919 34 0.00
920 21 0.00
921 11 0.00
922 40 0.00
923 10 0.00
924 44 0.00
925 40 0.00
926 30 0.00
927 12 0.00
928 45 0.00
929 26 0.00
930 31 0.00
931 101 0.01
932 13 0.00
933 8 0.00
934 1 0.00
935 14 0.00
936 8 0.00
937 10 0.00
938 6 0.00
939 5 0.00
940 2 0.00
942 12 0.00
943 1 0.00
944 4 0.00
946 14 0.00
947 5 0.00
948 1 0.00
949 7 0.00
950 6 0.00
951 9 0.00
952 1 0.00
954 1 0.00
955 104 0.01
956 16 0.00
957 10 0.00
958 17 0.00
959 129 0.01
961 8 0.00
962 1 0.00
963 44 0.00
964 93 0.01
965 129 0.01
966 58 0.01
967 13 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (899 bp):
TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGTGTGCGCACA
TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
CGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTCGTCG
GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACGAGGGTTGCGGCAGCA
GGATCAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
CATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCA
Found at i:19538569 original size:26 final size:26
Alignment explanation
Indices: 19538530--19538582 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19538520 GTTGACTTAG
*
19538530 GCATATGAAATTCATTCCCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
*
19538556 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
19538582 G
1 G
19538583 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.32, C:0.25, G:0.15, T:0.28
Consensus pattern (26 bp):
GCATACGAAATTCATTCCCAGTCTAA
Found at i:19539449 original size:26 final size:26
Alignment explanation
Indices: 19539420--19539498 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
19539410 GTTGACTTAG
19539420 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
19539446 GCATACAGAGTTCATTTCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19539472 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19539498 G
1 G
19539499 ATCGGACCAG
Statistics
Matches: 49, Mismatches: 4, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 49 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19541228 original size:26 final size:26
Alignment explanation
Indices: 19541189--19541241 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19541179 GTTGACTTAG
*
19541189 GCATACGGAATTCATTCCCAGTCTAA
1 GCATACGGAATTCATTACCAGTCTAA
* *
19541215 GCATATGGAGTTCATTACCAGTCTAA
1 GCATACGGAATTCATTACCAGTCTAA
19541241 G
1 G
19541242 ATTGGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAATTCATTACCAGTCTAA
Found at i:19542136 original size:26 final size:26
Alignment explanation
Indices: 19542106--19542158 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19542096 GTTTACTTAG
*
19542106 GCATATAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
19542132 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19542158 G
1 G
19542159 ATCGGACCGA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19543057 original size:26 final size:26
Alignment explanation
Indices: 19543021--19543070 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
19543011 GACTTAGGCT
*
19543021 TACAGAGTTCATTCCCAGTCTAAGCG
1 TACAGAGTTCATTCCCAATCTAAGCG
19543047 TACAGAGTTCATTCCCAATCTAAG
1 TACAGAGTTCATTCCCAATCTAAG
19543071 ATCGAACCAG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.26, G:0.16, T:0.28
Consensus pattern (26 bp):
TACAGAGTTCATTCCCAATCTAAGCG
Found at i:19544896 original size:26 final size:26
Alignment explanation
Indices: 19544860--19544912 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19544850 GTTGACTTAG
19544860 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19544886 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19544912 G
1 G
19544913 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19545992 original size:495 final size:495
Alignment explanation
Indices: 19545062--19546055 Score: 1623
Period size: 495 Copynumber: 2.0 Consensus size: 495
19545052 GGGCGGGGGG
*
19545062 GTGCGCACATGATGTGTAATGGGTGCTGGTACTTGGCCCTTATATTCGGCCCCTATCCCTCATCA
1 GTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTCGGCCCCTATCCCTCATCA
* *
19545127 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTGGCCA
66 AACCTCGAGAACTCACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCA
* * * *
19545192 TTAAAGTGTTTGGAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTT
131 TTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGGACACTTCGAGTTTT
* *
19545257 TAGCTGAATTTTTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
196 TAGCTAAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
19545322 AACACCTTCCAAAAAATTTTTAAAAAATCCCGAACCGAAAAAAGTTTTGGAAATCATGAAAAATA
261 AACACCTTCCAAAAAAATTTTAAAAAATCCCGAACCGAAAAAAGTTTTGAAAATCATAAAAAATA
* *
19545387 GAAAACAAGTCGTCTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
326 GAAAACAAGTCGTCTCGCCATGAAACATCACGTGAAGGCTTAAGGGACCATAGTATGAATTTACA
** * * *
19545452 AGCCATAAAAATGGCATTGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACTCTAT
391 AGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * *
19545517 CGATCCACGACTTGCGCATCCCGTCTCTCTGGTCGGCGTA
456 CGATCCAAGACTTGCGCATCCCGTCTCTCTGGCCGACGTA
* *
19545557 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT-GGCCCCCTATCTCTCATC
1 GTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTCGG-CCCCTATCCCTCATC
*
19545621 AAACCTCGAGAACTCACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
65 AAACCTCGAGAACTCACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCC
* *
19545686 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGGACACTTCGTGTTT
130 ATTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGGACACTTCGAGTTT
*
19545751 TTAGCTAAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCA
195 TTAGCTAAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* ** * *
19545816 AAA-ATCCTTCCAAAAAAATTTTAAAAAATCTCGAACCTCAAAAATTTTTGAAAATCGTAAAAAA
260 AAACA-CCTTCCAAAAAAATTTTAAAAAATCCCGAACCGAAAAAAGTTTTGAAAATCATAAAAAA
** *
19545880 TAGAAAATGAGTCGTCTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATAGTATGAATTTA
324 TAGAAAACAAGTCGTCTCGCCATGAAACATCACGTGAAGGCTTAAGGGACCATAGTATGAATTTA
19545945 CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
389 CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
*
19546010 ATCGATCCAAGGCTTGCGCATCCCGTCTCTCTGGCCGACGTA
454 ATCGATCCAAGACTTGCGCATCCCGTCTCTCTGGCCGACGTA
19546052 GTGC
1 GTGC
19546056 CCACCCGCCC
Statistics
Matches: 460, Mismatches: 37, Indels: 4
0.92 0.07 0.01
Matches are distributed among these distances:
494 3 0.01
495 457 0.99
ACGTcount: A:0.31, C:0.23, G:0.19, T:0.27
Consensus pattern (495 bp):
GTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTCGGCCCCTATCCCTCATCA
AACCTCGAGAACTCACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCA
TTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGGACACTTCGAGTTTT
TAGCTAAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
AACACCTTCCAAAAAAATTTTAAAAAATCCCGAACCGAAAAAAGTTTTGAAAATCATAAAAAATA
GAAAACAAGTCGTCTCGCCATGAAACATCACGTGAAGGCTTAAGGGACCATAGTATGAATTTACA
AGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
CGATCCAAGACTTGCGCATCCCGTCTCTCTGGCCGACGTA
Found at i:19547176 original size:26 final size:26
Alignment explanation
Indices: 19547140--19547192 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19547130 GTTGACTTAG
*
19547140 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19547166 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19547192 G
1 G
19547193 ATCGGATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19548302 original size:894 final size:894
Alignment explanation
Indices: 19545557--19550841 Score: 7320
Period size: 894 Copynumber: 5.9 Consensus size: 894
19545547 GGTCGGCGTA
*
19545557 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCTCTCATCA
1 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
19545622 AACCTCGAGAACTCACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
66 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
19545687 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGGACACTTCGTGTTTT
131 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
19545752 TAGCTAAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAA
196 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * ** * *
19545817 AAATCCTTCCAAAAAAATTTTAAAAAATCTCGAACCTCAAAAATTTTTGAAAATCGTAAAAAATA
261 AAATCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGCAAAAAGTTTCAAAAATCATGAAAAATA
* * *
19545882 GAAAATGAGTCGTCTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATAGTATGAATTTACA
325 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
** *
19545947 AGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
390 AGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * *
19546012 CGATCCAAGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCACCCGCCCGCT-TGTTTCA
455 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCT-TTTCG
19546076 TC----GG---AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTGGC
519 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTGGC
** * *
19546134 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCTCGCCCCTCTG
584 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTG
* * * * * *
19546199 GCCGGCGGAGCGGCTGCACGCTCATTTTGTGGGTTGACTTAGGGATACGGATTTCATTCCCAGTC
649 GCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * * * *
19546264 TAAGCATACAGAGTTCATTCCCAGTCTAAGGTCGGATTGGACCGAAGGTTGCGACAGTACATGCT
714 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAGCACATGCT
* ** * *
19546329 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCCCCGGGGCACCATCACCGGAGCATCGTCGG
779 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCGG
* * *
19546394 AAAACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGCC-GGGGGGT
844 AGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGT
* * * *
19546444 GTGTGCACATGATGTGCGATGGGTGCCGGCACTTGGCCCTTATATTGGACCCCTATCCCTCATCA
1 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * * *
19546509 AACCTCGAGAACTCACACACCCTTAAGGAGCATTTGAGATTTTACATGTTTCCTGCCGGTAGCCA
66 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
19546574 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTGACAAAATCTTGTACACTTCGAGTTTT
131 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
19546639 TAGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGAGCGAA
196 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
19546704 AAATCCTTCCAAAAAAATTTTAAAAAATCCTGAACTGCAAAAAGTTTTC-AAAATCTTGAAAAAT
261 AAATCCTTCCGAAAAAATTTTAAAAAATCC-GAACCGCAAAAAG-TTTCAAAAATCATGAAAAAT
*
19546768 AGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
324 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
19546833 AAGCCATAAAAATGGCATTGGCATG---AAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
389 AAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * * * *
19546895 TCGATCCACGGCATGCGTATCTCGTCTCTCTAGCCGGCGTAGTGCTCGCTCGCCTACCCGCCCGC
454 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--C-C-CG----CCCGCCCGC
* * * * * * *
19546960 TCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCTAATCTAAGATCAAACCAGATTAAGG
511 TCTTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGG
* * * ** * * * * * * **** *
19547025 GTTGCGGTAGCAGAATCAACAACATGTAGAAGGGGACCCGGCCAATTTTTGGTTTGCGCATCCCA
576 GTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCA
* * * *
19547090 CCCCTCTGGCCGGTTGAGCACCTGCACGCTCATTTTGTGGGTTGACTTAGGCATACGGAGTTCAT
641 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* * * *
19547155 TCCCATTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTCCGGCAG
706 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAG
* * * *
19547220 CACATGCTGGGCCCGGGCATGTGCTGGTGCGGCATTTTTCTTCGTCGAGGCACCATCGTCGGAGC
771 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGC
* * * *
19547285 ATCGTCGGAGAACCTGATCGGCGGCATTGGGGTTCCAGCGATCGGGGGGGCC-AGGGGGT
836 ATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGGGGGGT
**
19547344 GTGCGCACATGATGTGCGATGGGTGCTGGTACACGGCCCTTATATTGGCCCCCTATCCCTCATCA
1 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * *
19547409 AACCTTGAGAACTCACACCCCCTTAAAAAGCATTAGAGATTTTACAGGTTTGCTGCCAGTAAG-T
66 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGT-AGCC
19547473 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
130 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * * *
19547538 TTGGCTGAACTTTTTTGTGCACGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCA
195 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
*
19547603 AAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-CAAAAAGTTTCAAAAATCATGAAAAAT
260 AAAATCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGCAAAAAGTTTCAAAAATCATGAAAAAT
* * * *
19547667 AAAAAAGGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAATGGACCATTGTTTGAATTTAC
324 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
*
19547732 AAGTCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
389 AAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * *
19547797 TCGATCCATGGCTTGGGCATCCCGTCTCTCTGGCCAACGTAGTGCCCGCCCGCCCGCTCTTTTCG
454 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCTTTTCG
* *
19547862 TTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACGAGA-TCGAGGGTTGTGG
519 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACT-GAGGGTTGTGG
* * * * * *** * * *
19547926 TAACAGGATCGGTAGCACGTAGAGGGGGACCCGACCAATCCCTAACTTGCGCATCTCGCCCGTCT
583 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCT
* *
19547991 GGCCGACTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATAC-GAGTTCATTCCTAGT
648 GGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * *
19548055 CTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTGCGGTAGCACATGC
713 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAGCACATGC
* * * * *
19548120 TGGGCTCGGGCTTGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCACCGGAGCATCGCCA
778 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCG
*
19548185 GAGAACCTGACCGGCGGCATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGGGT
843 GAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCC-GGGGGGGT
19548238 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
1 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
19548303 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAA
66 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
19548368 TTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
131 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* *
19548433 TAGCTGAATTTTTTTGTGCAAGCCAACAAAAATACAAGGATCACGTCTACCAA-ATTGGGGCCAA
196 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
19548497 AAATCCTTCCGAAAAAATTTTAAAAAATCCTGAACCTCAAAAAGTTTCAAAAATCGTGAAAAAGA
261 AAATCCTTCCGAAAAAATTTTAAAAAATCC-GAACCGCAAAAAGTTTCAAAAATCATGAAAAATA
* * * *
19548562 AAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTTAATTTACA
325 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
19548627 AGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
390 AGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* ** *
19548692 CGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGTGTAGT----GCCCGCCCGCTCATTTCGT
455 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCTTTTCGT
* * * *
19548753 CGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGAT-GGACCAGACTGAGGGTTATGGTA
520 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTGGCA
* * ** * * * *
19548817 GTAGGATCGGGAGCACATAGAGGGGCACCCTACCGAT-CGCGGCTTGCGCATCCCACCCCTTTGG
585 GCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGG
* *
19548881 CCGGCTGAGCGCCCACACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTCCATTCCCAGTCT
650 CCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* *
19548946 AAGCATACGGAGTTCATTCCCAGTCCAAGATCGGACCGGACCGAGGGTTACGGCAG--CA---T-
715 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAGCACATGCTG
* * *
19549005 -G-T----C-----CTGGTGCCACA-TTTTCTTCGTCGGGGCACCATCGTCGGAGCATTGCCGGA
780 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCGGA
*
19549058 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGGGT
845 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGG-GGGGT
* *
19549110 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCACTTATCA
1 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
19549175 AATCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCTA
66 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
19549240 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAACGGTCACAAAATATTGTAGACTTCGAGTTTT
131 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
19549305 TGGCTCAATTTTTTTTTGCATGCCAACAAAAAAACAAGGATCACGTCTACCAAGTTTGGGGCCAA
196 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
19549370 AAATCCATCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAACTTTCGAAAATCATGAAAAATA
261 AAATCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATA
*
19549435 GAAAACGAGTCGTCTTGCCATGAAAATTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
325 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * ***
19549500 AGCCATAAAAATTGCTTTGGCACATAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
390 AGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
19549565 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGT-CCCGCCCGCCCGCCTGCTCGTT
455 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-CT-CT--TT
* * * *
19549629 TCGTCGGTTGGCTTAGACATACGGAGTTCATTGCCAGTCTAAGATCGGACCAGACCGAGGGTTGT
516 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGT
* * * * *
19549694 GGCAGCAGGATCGGCAGCACGCATAGGGGGACCC-AGCCGATCCCCAGCTTGTGCGTCCCGCCCC
581 GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCACCCC
** * * *
19549758 TCCAGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCCC
645 TCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * *
19549823 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACCGAGGGTTTCAGCAGCACA
710 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAGCACA
* * * *
19549888 TGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTTGCCAGGGCACCAT---C---G--T--
775 TGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG
* *
19549943 -CGGAGAACCTGACCGGCGGCATTGGAGTTCCGGCAATCGGGTGGGCCGGAGGGTGGT
840 CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGG-GGGCCGG-GGG-GGT
** *
19550000 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCTGCCTATCTCTCATCA
1 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
19550065 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAAATTTTACAGGTTT-CTGCTAGTAGCCA
66 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
19550129 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
131 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
19550194 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATATAGGGATCACGTCTACCAAGTTCGGGGCCAA
196 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * *
19550259 AACTCTTTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATTATGAAAAATA
261 AAATCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATA
* * *
19550324 GAAAACAAGTCGTCTAGCCATGAAACTTCACGTGAAGGATTAAGGGACCATTGTATGAATTTACA
325 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
*
19550389 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
390 AGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * *
19550454 CGATCCACGGCTTGCGCATCCTGTCTCTATGGCCGGCATAGTGCCAGCACGCCCGCCCGCCCGCT
455 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC-G-A-CGT---AG--TGCCCGCCCGCCCGCT
* * * * *
19550519 CGTTTCGTCGGTTGGCTAAGGCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACTGACGG
512 CTTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGG
* * * ** * * **
19550584 TTGCGGCAACCA-GATTGGCAGCACGCAGAGGCAGTCCCGATCGATCCCCGGCTTATGCATCCCA
577 TTGTGGC-AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCA
*
19550648 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
641 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
**
19550713 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGATTGAGGGTTACGGCAG
706 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAG
* * * **
19550778 CCCATGCTGGGCTCGAGCATGTGCTGGTGCCACATTTTTCTTCGTTAGGGCACCATCGCCGGAG
771 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
19550842 AACCTGACTT
Statistics
Matches: 3913, Mismatches: 400, Indels: 157
0.88 0.09 0.04
Matches are distributed among these distances:
871 69 0.02
872 256 0.07
873 225 0.06
874 2 0.00
876 9 0.00
877 3 0.00
878 1 0.00
880 45 0.01
881 50 0.01
882 131 0.03
884 78 0.02
886 2 0.00
887 381 0.10
888 71 0.02
889 499 0.13
890 173 0.04
891 1 0.00
892 28 0.01
893 207 0.05
894 863 0.22
895 6 0.00
896 3 0.00
897 4 0.00
898 18 0.00
899 413 0.11
900 299 0.08
901 3 0.00
902 73 0.02
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (894 bp):
GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
AAATCCTTCCGAAAAAATTTTAAAAAATCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAG
AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
GCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCTTTTCGTC
GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTGGCAG
CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGC
CGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
AGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAGCACATGCTGG
GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCGGAG
AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGT
Found at i:19549840 original size:26 final size:26
Alignment explanation
Indices: 19549804--19549856 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19549794 GTTGACTTAG
*
19549804 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19549830 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19549856 G
1 G
19549857 ATTGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19550734 original size:26 final size:26
Alignment explanation
Indices: 19550698--19550750 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19550688 GTTGACTTAG
19550698 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19550724 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19550750 G
1 G
19550751 ATCGGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19551639 original size:271 final size:271
Alignment explanation
Indices: 19551156--19551648 Score: 702
Period size: 271 Copynumber: 1.8 Consensus size: 271
19551146 CCTACAGCAC
* ** * *
19551156 GTAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCGGCCCCTCCGGCCGGTTGATCACCCGC
1 GTAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCCGCCCCTCCAACCGGCTGAGCACCCGC
* ** *
19551221 ACACTCGTTTCATGGGTTGACTTAGGCACACGGAGTTCATTCACCATCTAAGATTGGATCGGACT
66 ACACTCGTTTCACGGGTTGACTTAGGCACACGGAGTTCATTCACCATCTAAGATCAGACCGGACT
* * * *
19551286 GAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTTGAATGGGC
131 GAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGAAGGGGC
19551351 ACCATCGTCGGAGCATCACCGGAGAACTCACACCCCCTTAAAGAGCATTTTAGACAACATGCAAG
196 ACCATCGTCGGAGCATCACCGGAGAACTCACACCCCCTTAAAGAGCATTTTAGACAACATGCAAG
19551416 ATCGACAACAT
261 ATCGACAACAT
* * * * *
19551427 GTAGAGGGGGACCTGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTAACCGGCTGCGCACCCGT
1 GTAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCCGCCCCTCCAACCGGCTGAGCACCCGC
* * *
19551492 ACGCTTGTTTCACGGGTTGACTTAGGCATACGGAGTTCATTC-CCAGTCTAAGATCAGACCGGA-
66 ACACTCGTTTCACGGGTTGACTTAGGCACACGGAGTTCATTCACCA-TCTAAGATCAGACCGGAC
* * * **
19551555 TCGAGGGTTGTGGCAGCACATGCTAGGCTCGGGCATGTGTTGGTGCTACATTTTTCTTCGTCGGG
130 T-GAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGAAGGG
* *
19551620 GCACCATCGTTGGAGCATCATCGGAGAAC
194 GCACCATCGTCGGAGCATCACCGGAGAAC
19551649 CTGACCGGCG
Statistics
Matches: 192, Mismatches: 28, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
270 4 0.02
271 188 0.98
ACGTcount: A:0.20, C:0.28, G:0.28, T:0.23
Consensus pattern (271 bp):
GTAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCCGCCCCTCCAACCGGCTGAGCACCCGC
ACACTCGTTTCACGGGTTGACTTAGGCACACGGAGTTCATTCACCATCTAAGATCAGACCGGACT
GAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGAAGGGGC
ACCATCGTCGGAGCATCACCGGAGAACTCACACCCCCTTAAAGAGCATTTTAGACAACATGCAAG
ATCGACAACAT
Done.