Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167915.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_18, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 20765110
ACGTcount: A:0.32, C:0.17, G:0.17, T:0.32
Warning! 90000 characters in sequence are not A, C, G, or T
File 83 of 117
Found at i:16392137 original size:159 final size:157
Alignment explanation
Indices: 16391811--16392205 Score: 477
Period size: 159 Copynumber: 2.5 Consensus size: 157
16391801 CTAGCATGTG
* * *
16391811 CTGCCGCAACCCTCGGTCCGATCCGATCTCAGACTGGGAATGAACTCCGTATGTCTAAGTCAACC
1 CTGCCGCAACCCTCGGTCCG-TCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* *
16391876 CACGAAATGAGTGTACGGCACTCAGACGGCCAGAAGGGCAGGATGCGCAAGCCGGGGATCGACCG
65 CACGAAACGAGCGTACGGCACTCAGACGGCCAGAAGGGCAGGATGCGCAAGCCGGGGATCGACCG
* *
16391941 CGTCCCCCTTTGCGTGCTGTCGATCCTG
130 CGTCCCCCTCTGCGTGCTGTCGATCCTA
** * *
16391969 CTGTTGCAACCCTCGGTCCAGTTCAATGTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
1 CTGCCGCAACCCTCGGTCC-GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * *
16392034 CACGAAACGAGCGTGCGGC-CGTTCAGCCGGCCGGAGGGGCGGGATGCGCAAGCCGGGGATCGAT
65 CACGAAACGAGCGTACGGCAC--TCAGACGGCCAGAAGGGCAGGATGCGCAAGCCGGGGATCGAC
* *
16392098 TGGGTCCCCCTCTGCGTGCTGTCGATCCTA
128 CGCGTCCCCCTCTGCGTGCTGTCGATCCTA
* * * * * * * *
16392128 CTGCCGCAACCCTCTGTCTGGTCCAATCTTATACTTGGACTGAACTCTGTATCCCTAAGCCAACC
1 CTGCCGCAACCCTCGGTC-CGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* *
16392193 GATGAAACGAGCG
65 CACGAAACGAGCG
16392206 GGCGAACGAG
Statistics
Matches: 200, Mismatches: 33, Indels: 7
0.83 0.14 0.03
Matches are distributed among these distances:
157 1 0.00
158 72 0.36
159 127 0.63
ACGTcount: A:0.21, C:0.31, G:0.28, T:0.20
Consensus pattern (157 bp):
CTGCCGCAACCCTCGGTCCGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
ACGAAACGAGCGTACGGCACTCAGACGGCCAGAAGGGCAGGATGCGCAAGCCGGGGATCGACCGC
GTCCCCCTCTGCGTGCTGTCGATCCTA
Found at i:16393771 original size:25 final size:25
Alignment explanation
Indices: 16393724--16393771 Score: 62
Period size: 26 Copynumber: 1.9 Consensus size: 25
16393714 GTGCCGATCC
**
16393724 TAGATGGGAATGAACTTTTGTATAT
1 TAGATGGGAATGAACTTCCGTATAT
16393749 TAGACTGGGAATGAAC-TCCGTAT
1 TAGA-TGGGAATGAACTTCCGTAT
16393772 GCCTTACGGT
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
25 9 0.45
26 11 0.55
ACGTcount: A:0.31, C:0.10, G:0.25, T:0.33
Consensus pattern (25 bp):
TAGATGGGAATGAACTTCCGTATAT
Found at i:16394655 original size:26 final size:26
Alignment explanation
Indices: 16394626--16394676 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16394616 TGTTCGATCC
*
16394626 TAGACTGGGAATGAACTTCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
*
16394652 TAGAGTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16394677 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.29, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:16395493 original size:26 final size:26
Alignment explanation
Indices: 16395457--16395509 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16395447 CCTGTCCAAT
* *
16395457 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16395483 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16395509 C
1 C
16395510 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16396389 original size:26 final size:26
Alignment explanation
Indices: 16396360--16396438 Score: 122
Period size: 26 Copynumber: 3.0 Consensus size: 26
16396350 CTGGTCCGAT
*
16396360 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
* *
16396386 CTTAGACTGGGAATAAACTCTTTATG
1 CTTAGACTGGGAATGAACTCTGTATG
*
16396412 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16396438 C
1 C
16396439 CTAAGTCAAC
Statistics
Matches: 47, Mismatches: 6, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 47 1.00
ACGTcount: A:0.29, C:0.18, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16397317 original size:26 final size:26
Alignment explanation
Indices: 16397281--16397333 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16397271 CCTGTCCAAT
* *
16397281 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16397307 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16397333 C
1 C
16397334 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16398221 original size:26 final size:26
Alignment explanation
Indices: 16398185--16398237 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16398175 CCTGTCCAAT
* * *
16398185 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16398211 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16398237 C
1 C
16398238 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:16398748 original size:905 final size:903
Alignment explanation
Indices: 16394938--16399421 Score: 6725
Period size: 903 Copynumber: 4.9 Consensus size: 903
16394928 GTAGGTGGGT
16394938 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
1 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
16395003 CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
66 CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
16395068 TGATCCTTGTATTTTTGTTGGCATGCGCCAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATT
131 TGATCCTTGTATTTTTGTTGGCATGCGCCAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATT
16395133 TTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTGT
196 TTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTGT
16395198 AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAAT
261 AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAAT
16395263 CTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
326 CTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
16395328 TGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGAAGAA
391 TGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGAAGAA
16395393 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCCAATC
456 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCCAATC
16395458 TTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
521 TTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
*
16395523 CGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGGAAGCCGGGGATTGGTCGG
586 CGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATTGGTCGG
16395588 GTCCCCCTCTATGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGACTAGG
651 GTCCCCCTCTATGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGACTAGG
16395653 AATGAACTCCGTATGCCTAAGCCAAATGAGGAAATGAGCGGGCGGGAGGACGGGCGGACACTACA
716 AATGAACTCCGTATGCCTAAGCCAAATGAGGAAATGAGCGGGCGGGAGGACGGGCGGACACTACA
16395718 CCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAATGATAAAGTGGTAGGTGGGTTTAGGCACATC
781 CCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAATGATAAAGTGGTAGGTGGGTTTAGGCACATC
16395783 TTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
846 TTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * *
16395841 TTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAAC
1 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * * * * * *
16395906 TTTTTACGGTTTCG-AATTTTTTAAAA-TTTTTCGAAAGGAGTTTTGGCCCCAAACTTTGTAGAC
66 CTTTTACAG-TTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGAC
* * * *
16395969 GTGATCCTTGTATTTTTCTTGGCATGC-ACAGAAAAATTCAGCTAAAAACTCAAAGTGTACAAGA
130 GTGATCCTTGTATTTTTGTTGGCATGCGCCA-AAAAATTCAACTAAAAACTCGAAGTGTACAAGA
* * * * *
16396033 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAGTGGCTACTGGCAGCAAACCT
194 TTTTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTT
* * *
16396098 GTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCT-AGAGGTTTGATG-AGAGATATGGGGC
259 GTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCA-AGGTTTGATGAAG-GATAGGGGGC
* ** ** ** *
16396161 CAATATAAGGGCCAAGTACCAGCACATATTGCACATCATGTGCGCACACCCCCCCGGCCCCAACT
322 CAATCTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA-CCCCCCGGCCCCCCCG
* * * * ** * * * *
16396226 ATCGCCGGAACCCTAATGCCGCCGGCCAGGTTCTCCAGCGGTGCTCCAACAATAGTGCCCCGACG
386 ATCGCTGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACG
* * *
16396291 AAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGT-CTGGT
451 AAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCT-GT
* * *
16396355 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATAAACTCTTTATGCTTAGACT
515 CCAATCTTAGATTGGGAATGAACTTCGTATGCTTAGACTGGG-----A------ATG---A-AC-
* * * * **
16396420 AGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAAGGAGCGTACGGGCGCTCACCCAAACCAG
564 -----T---C-C-GTATGCCTAAGTCAACCCACGAAATGAGCTTGCGGGCGCTCAGCC-GGCCAG
* * * * * * * *** * *
16396485 AGGGGTGGGATGCGCAAGTCGAGGATCGATC-GGTCTCTCTCTGCATGCTGTCAATCTTGCTACC
618 AGGGGCGGGATGCGCAAGCCGGGGATTGGTCGGGTCCCCCTCTATGTGCTGTCAATCCTACTACC
* ** * * * * ** *
16396549 GCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATG-
683 GTAACCCTCAATCTGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAATGAGGA
* * * * * *
16396613 AA--A-CGAGC--G-GGA-GGGCGGGCACTATGA-CGGCCAGAGAGA-TAGGATGCGCAAGCCAT
748 AATGAGCGGGCGGGAGGACGGGCGGACACTA-CACCAGCCAGAGAGACGA-GATGCGCAAGCCGT
*** ** **
16396669 GGACCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTT
811 GGAATGATAAAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGCCATTTTT
*
16396734 ATGGCTTGTAGATTCATACAATGGTCCC
876 ATGGCTTGTAAATTCATACAATGGTCCC
16396762 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
1 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
16396827 CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
66 CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
*
16396892 TGATCCTTGTATTTTTGTTGGCATGCGCCAAAAAATTCAACTAAAAACTCGTAGTGTACAAGATT
131 TGATCCTTGTATTTTTGTTGGCATGCGCCAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATT
16396957 TTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTGT
196 TTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTGT
16397022 AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAAT
261 AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAAT
16397087 CTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
326 CTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
16397152 TGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGAAGAA
391 TGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGAAGAA
16397217 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCCAATC
456 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCCAATC
16397282 TTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
521 TTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
16397347 CGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATTGGTCGG
586 CGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATTGGTCGG
*
16397412 GTCCCCCTCTGTGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGACTAGG
651 GTCCCCCTCTATGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGACTAGG
* *
16397477 AATGAACTCCGTATGCTTAAGCCAATTGAGGAAATGAGCGGGCGGGAGGACGGGCGGACACTACA
716 AATGAACTCCGTATGCCTAAGCCAAATGAGGAAATGAGCGGGCGGGAGGACGGGCGGACACTACA
16397542 CCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAATGATAAAGTGGTAGGTGGGTTTAGGCACATC
781 CCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAATGATAAAGTGGTAGGTGGGTTTAGGCACATC
16397607 TTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
846 TTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
16397665 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
1 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
16397730 CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
66 CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
*
16397795 TGATCCTTGTATTTTTGTTGGCATGCGCCAAAAAATTCAACTAAAAACTCGTAGTGTACAAGATT
131 TGATCCTTGTATTTTTGTTGGCATGCGCCAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATT
16397860 TTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTGT
196 TTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTGT
16397925 AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAAT
261 AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAAT
16397990 CTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCCGATCG
326 CTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG-CCCCCCCGATCG
16398055 CTGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGAAGA
390 CTGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGAAGA
16398120 AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCCAAT
455 AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCCAAT
*
16398185 CTTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATCAACTCCGTATGCCTAAGTCAACCC
520 CTTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
16398250 ACGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGGCAAGCCGGGGATTGGTC
585 ACGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC-GCAAGCCGGGGATTGGTC
16398315 GGGTCCCCCTCTATGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGACTA
649 GGGTCCCCCTCTATGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGACTA
16398380 GGAATGAACTCCGTATGCCTAAGCCAAATGAGGAAATGAGCGGGCGGGAGGACGGGCGGACACTA
714 GGAATGAACTCCGTATGCCTAAGCCAAATGAGGAAATGAGCGGGCGGGAGGACGGGCGGACACTA
16398445 CACCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAATGATAAAGTGGTAGGTGGGTTTAGGCACA
779 CACCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAATGATAAAGTGGTAGGTGGGTTTAGGCACA
16398510 TCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
844 TCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
16398570 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAAC
1 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* ** * ** *** * *
16398635 TTTTTAGGGTTCGAGATTTTTTAAAATTTTTTCAAAACAAGTTGTGGCACCAAACTTGGTAGACG
66 CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
* * * *
16398700 TGATCCTTGTATTTTTTTTGGCATGC-ACAAAACATTTCAAGTAAAAACTCGAAGTGTACAAGAT
131 TGATCCTTGTATTTTTGTTGGCATGCGCCAAAA-AATTCAACTAAAAACTCGAAGTGTACAAGAT
* * * *
16398764 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACCTG
195 TTTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTG
* * * *
16398829 TAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
260 TAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAA
* * * *
16398894 TATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCGCCCCCCGACCCCCCGA
325 TCTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA--C-CCCCCGGCCCCCCCGA
* * ** * * * * ** * * **
16398959 TCACCGGAACCCCAATGTCGCCGGTCAGGTTCTTTGGCGATGCTCTGGCGACGGTGCCCCGACGA
387 TCGCTGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGA
* * * * * *
16399024 AGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTACCAAAACCCTTGGTCCGGTCC
452 AGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCC
* * * * *
16399089 GATCTTAGATAGGGAATCAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
517 AATCTTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * * * *
16399154 CCCA-TAAACGAGCGTGCGAGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGA-TCG
582 CCCACGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATTGG
* ** * * * ** * * *
16399217 ACTGGGTCCCCCTCTACATGCTGCCAATCCTACTATCGCAAGACTCAGTCTGGTCCGATCTTAGA
647 TC-GGGTCCCCCTCTATGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGA
* * * * ** * * * * *
16399282 TTGGGAATGAACTCCATATGCCTAAACCAACCGATG-AA--A-CGAGCAGGAGGGCGGGCGGGCA
711 CTAGGAATGAACTCCGTATGCCTAAGCCAAATGAGGAAATGAGCGGGCGGGAGGACGGGCGGACA
** * * * * *
16399343 CTACGTC-GACCATAGAGACGGGATGCGCAAGCCTTGG-ATCGATAGAGTGGTAGGTGAGTTTAG
776 CTACACCAG-CCAGAGAGACGAGATGCGCAAGCCGTGGAAT-GATAAAGTGGTAGGTGGGTTTAG
16399406 GCACATCTTCATATTT
839 GCACATCTTCATATTT
16399422 CTACGGATCG
Statistics
Matches: 3246, Mismatches: 274, Indels: 124
0.89 0.08 0.03
Matches are distributed among these distances:
894 30 0.01
895 121 0.04
896 3 0.00
897 1 0.00
898 1 0.00
899 4 0.00
900 4 0.00
901 91 0.03
902 255 0.08
903 742 0.23
904 267 0.08
905 697 0.21
906 41 0.01
907 183 0.06
908 7 0.00
910 3 0.00
914 3 0.00
916 1 0.00
917 1 0.00
918 2 0.00
920 5 0.00
921 365 0.11
922 253 0.08
923 6 0.00
924 1 0.00
925 4 0.00
926 1 0.00
927 1 0.00
928 3 0.00
929 121 0.04
930 29 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (903 bp):
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
CTTTTACAGTTCGTGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCTCCAAACTTGGTAGACG
TGATCCTTGTATTTTTGTTGGCATGCGCCAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATT
TTGTGACCATTTAAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGTCAGCAAACTTGT
AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAAT
CTAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
TGGAACCTTAATGCCACTGATCAGGTTCTCCGGCGATGCTCCGACGATAGTGCCCCGACGAAGAA
AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCTGTCCAATC
TTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
CGAAATGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATTGGTCGG
GTCCCCCTCTATGTGCTGTCAATCCTACTACCGTAACCCTCAATCTGATCTGATCTTAGACTAGG
AATGAACTCCGTATGCCTAAGCCAAATGAGGAAATGAGCGGGCGGGAGGACGGGCGGACACTACA
CCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAATGATAAAGTGGTAGGTGGGTTTAGGCACATC
TTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
Found at i:16399121 original size:26 final size:26
Alignment explanation
Indices: 16399092--16399144 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16399082 CCGGTCCGAT
16399092 CTTAGA-TAGGGAATCAACTCCGTATG
1 CTTAGACT-GGGAATCAACTCCGTATG
*
16399118 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16399144 C
1 C
16399145 CTAAGCCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:16400710 original size:26 final size:26
Alignment explanation
Indices: 16400681--16400731 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16400671 GGTCCGATCA
16400681 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
16400707 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16400732 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:16402423 original size:26 final size:26
Alignment explanation
Indices: 16402394--16402444 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16402384 GGTCCGATCA
16402394 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
16402420 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16402445 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:16404206 original size:26 final size:26
Alignment explanation
Indices: 16404156--16404208 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16404146 CCGATCCAAT
* **
16404156 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16404182 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16404208 C
1 C
16404209 CTAAGACAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16404920 original size:26 final size:26
Alignment explanation
Indices: 16404891--16404946 Score: 78
Period size: 26 Copynumber: 2.2 Consensus size: 26
16404881 TCGATCCGAT
* *
16404891 CTTAGACT-GAGAATGAACTCCGTATG
1 CTTAGACTAG-GAATGAACTCCATACG
16404917 CTTAGACTAGGAATGAACTCCATACG
1 CTTAGACTAGGAATGAACTCCATACG
16404943 CTTA
1 CTTA
16404947 AGCCAACCGA
Statistics
Matches: 27, Mismatches: 2, Indels: 2
0.87 0.06 0.06
Matches are distributed among these distances:
26 26 0.96
27 1 0.04
ACGTcount: A:0.32, C:0.21, G:0.20, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATACG
Found at i:16405650 original size:26 final size:26
Alignment explanation
Indices: 16405621--16405673 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16405611 CCGGTCTGAT
16405621 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16405647 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16405673 C
1 C
16405674 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16406401 original size:26 final size:26
Alignment explanation
Indices: 16406372--16406424 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16406362 CCGGTCTGAT
16406372 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16406398 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16406424 C
1 C
16406425 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16407088 original size:730 final size:730
Alignment explanation
Indices: 16403530--16407227 Score: 5606
Period size: 735 Copynumber: 5.0 Consensus size: 730
16403520 GGCAGAGAGA
* *
16403530 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTGTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGC
* * * * *
16403595 ATGTCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCGCGTGATGTT
66 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
16403660 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACGTTTTGCGGTTCGGGATTTT
131 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
* * * * * *
16403725 TT-AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTCTATTTTTATTG
196 TTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTTG
* * *
16403789 GCATGCACAAAAACATTGAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAG
261 GCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * * * *
16403854 TGTGCC-CATTTCAGACACTTTAATGGCTACTGACAGCAAACTTATAAAATCTCAAATGCTCTTT
326 TGT-CCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAATTCTCAAATGCTCTTT
* * * * * * * *
16403918 AAGGGGGTGTGATTTCTCGATGTTTGATGATGGATAGGGGGCCAATATAGGGGCCAAGTACCAGC
390 AAGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTACTAGC
* * * * * * * *
16403983 ACCCATTGTACATCATGTGCGCACACCCCCCGACCCCCGATCG-CTGGAACCCCAATGCCGCCAG
455 ACCCATCGCACATTATGTGCGCACACCCCCGGCCCCCCGATCGTC-GGAATCCCAATGCCACCGG
* * * * ** *
16404047 TCAGGTTCT-CCGATGATGCTCTGACGATAGCGACCCGGTGAAGAAAAATGCAGCACCAGCACAT
519 TCAGGTTCTGCAG-TGATGCTCCGACGATAGAGCCCCGACGAAGAAAAATGCAGCACCAACACAT
* * * * ** * *
16404111 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTT
583 GCCCGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTAGACTAGGAATGAACTC
* * * * * * * *
16404176 TGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGACAACCCACGAAATGAGCAGGCGGGCG
648 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAG-TGTCCGG-G
* * * ***
16404241 GGCACTACGCCAGCTAGAGAAA
711 TGCTC-A-GCCGGCTAGAGGGG
* * *
16404263 CGGCATGCGCAAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGC
* *
16404328 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTT
66 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
16404393 TCATGGCAAGACAACTCGTTTTCTATTTTTGATGATTTTTGAAACTTTTTGCGG-TCGAGATTTT
131 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
* ** * * *
16404457 TTAAAATTTTTTCGAAAATATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
196 TTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTTG
* * *
16404522 GCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAA
261 GCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * * *
16404587 TGTCC-CCTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTA
326 TGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAATTCTCAAATGCTCTTTA
* * * *
16404651 AGGGGGTGTGAGTTGTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
391 AGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTACTAGCA
* ***
16404716 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCGCCCGATCGTCGGAA-CCCTAATGCTGTC
456 CCCATCGCACATTATGTGCGCACA--CCCCCGGCCC-CCCGATCGTCGGAATCCC-AATGCCACC
* ** * * * *
16404780 GGTCAGGTTCT-CAGACGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
517 GGTCAGGTTCTGCAG-TGATGCTCCGACGATAGAGCCCCGACGAAGAAAAATGCAGCACCAACAC
* * * * * * * * *
16404844 ATGCCCAAGCCCAGTATTTGCTACCGCAACCCTCAGTTCGATCCGATCTTAGACT-GAGAATGAA
581 ATGCCCGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTAGACTAG-GAATGAA
* * * * * * * *
16404908 CTCCGTATGCTTAGACTAGGAATGAACTCCATACGCTTAAGCCAAC-CGACGAAACGAGCAGGCA
645 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGC-ACGAAACGAG-TGTCC
* * * *
16404972 GGCGGGCACTATGCCGGCTAGAGAGA
708 GG-GTGCTC-A-GCCGGCTAGAGGGG
*
16404998 CGGCATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGC
16405063 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
66 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
16405128 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
131 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
16405193 TTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTTG
196 TTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTTG
16405258 GCATGCAC-AAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
261 GCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
16405322 TGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAATTCTCAAATGCTCTTTA
326 TGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAATTCTCAAATGCTCTTTA
16405387 A-GGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTACTAGCA
391 AGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTACTAGCA
16405451 CCCATCGCACATTATGTGCGCACACCCCCGG-CCCCCGATCGTCGGAAT-CCAATGCCACCGGTC
456 CCCATCGCACATTATGTGCGCACACCCCCGGCCCCCCGATCGTCGGAATCCCAATGCCACCGGTC
16405514 AGGTTCTGCAGTGATGCTCCGACGATAGAGCCCCGACGAAGAAAAATGCAGCACCAACACATGCC
521 AGGTTCTGCAGTGATGCTCCGACGATAGAGCCCCGACGAAGAAAAATGCAGCACCAACACATGCC
16405579 CGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGT
586 CGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGT
16405644 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAGTGTCCGGGTGCTC
651 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAGTGTCCGGGTGCTC
16405709 AGCCGGCTAGAGGGG
716 AGCCGGCTAGAGGGG
16405724 CGGGATGCGCAAGCCAG-GGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTG
1 CGGGATGCGCAAGCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTG
16405788 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
65 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
16405853 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTGAAACTTTTTACGGTTCGAGATTT
130 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTT
16405917 TTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTT
195 TTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTA-TTTTTTT
16405982 TGGCATGCACAAAAAAATTAAGCT-AAAACTCGAAGTGTACAAGATTTTTCGTGACCATTTGAAA
259 TGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGA-TTTT-GTGACCATTTG--A
16406046 AAAATAGTGTCCTCATTTCAGACACTTTAATGGGTCAAATGGCCAAGCAAACC-GTAAATTCTCA
320 AAAA-AGTGTCCTCATTTCAGACACTTTAATGGGT--AATGG-C-AGCAAACCTGTAAATTCTCA
*
16406110 AATGCTCTTTAAGGGGTGGTTGAG-TCTCAAGGCTTTGATG-GGCGATAGGGGGCCACTTATTAA
380 AATGCTCTTTAAGGGGTTG-TGAGTTCTCAAGG-TTTGATGAGG-GATAGGGGGCCAC-TA-TAA
*
16406173 GGGCACAAGTACTAAGCACCCATCCCACATTATGTGCGCACACCCCCGGCCCACCTACCGATTCG
440 GGGC-CAAGTACT-AGCACCCATCGCACATTATGTGCGCACACCCCCGG-CC-CC--CCGA-TCG
*
16406238 TCGGAATCCCAATGCCCACCCGGTCAGGTTTCTGCAGTGATGTTTCCGACGATAGAGCCCCGACG
498 TCGGAATCCCAATG-CCA-CCGGTCAGG-TTCTGCAGTGATG-CTCCGACGATAGAGCCCCGACG
*
16406303 AAGAAAAATGCAGCACCAACACATGCCCTGAGCCTAGCATGTGCGACCG-AACCATCGGTCCGGT
559 AAGAAAAATGCAGCACCAACACATGCCC-GAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGT
16406367 CTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
623 CTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
16406432 AACGCACGAAACGAGTGTCCGGGTGCTCAGCCGGCTAGAGGGG
688 AACGCACGAAACGAGTGTCCGGGTGCTCAGCCGGCTAGAGGGG
16406475 CGGGATGCGCAAGCCAG-GGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTG
1 CGGGATGCGCAAGCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTG
16406539 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
65 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
16406604 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTT
130 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTT
16406669 TTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTT
195 TTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTT
16406734 GGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
260 GGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
16406799 GTGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAATTCTCAAATGCTCTTT
325 GTGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAATTCTCAAATGCTCTTT
16406864 AAGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTACTAGC
390 AAGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTACTAGC
16406929 ACCCATCGCACATTATGTGCGCACACCCCCGGCCCCCCGATCGTCGGAATCCCAATGCCACCGGT
455 ACCCATCGCACATTATGTGCGCACACCCCCGGCCCCCCGATCGTCGGAATCCCAATGCCACCGGT
16406994 CAGGTTCTGCAGTGATGCTCCGACGATAGAGCCCCGACGAAGAAAAATGCAGCACCAACACATGC
520 CAGGTTCTGCAGTGATGCTCCGACGATAGAGCCCCGACGAAGAAAAATGCAGCACCAACACATGC
16407059 CCGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCG
585 CCGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCG
16407124 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAGTGTCCGGGTGCT
650 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAGTGTCCGGGTGCT
16407189 CAGCCGGCTAGAGGGG
715 CAGCCGGCTAGAGGGG
16407205 CGGGATGCGCAAGCCAG-GGATCG
1 CGGGATGCGCAAGCC-GTGGATCG
16407228 GTCGGGTTCA
Statistics
Matches: 2778, Mismatches: 135, Indels: 107
0.92 0.04 0.04
Matches are distributed among these distances:
725 85 0.03
726 211 0.08
727 19 0.01
728 15 0.01
729 23 0.01
730 363 0.13
731 64 0.02
732 161 0.06
733 306 0.11
734 54 0.02
735 547 0.20
736 157 0.06
737 4 0.00
738 9 0.00
739 42 0.02
740 42 0.02
741 7 0.00
742 3 0.00
743 34 0.01
744 40 0.01
745 9 0.00
746 10 0.00
747 36 0.01
748 8 0.00
749 9 0.00
750 24 0.01
751 372 0.13
752 124 0.04
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (730 bp):
CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGC
GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
TTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTTTTG
GCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
TGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAATTCTCAAATGCTCTTTA
AGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTACTAGCA
CCCATCGCACATTATGTGCGCACACCCCCGGCCCCCCGATCGTCGGAATCCCAATGCCACCGGTC
AGGTTCTGCAGTGATGCTCCGACGATAGAGCCCCGACGAAGAAAAATGCAGCACCAACACATGCC
CGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGT
ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAGTGTCCGGGTGCTC
AGCCGGCTAGAGGGG
Found at i:16407131 original size:26 final size:26
Alignment explanation
Indices: 16407102--16407154 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16407092 CCGGTCTGAT
16407102 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16407128 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16407154 C
1 C
16407155 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16408023 original size:26 final size:26
Alignment explanation
Indices: 16407994--16408046 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16407984 CCGGTCCGAT
*
16407994 CTTAGACTGGGATTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16408020 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16408046 C
1 C
16408047 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16408532 original size:884 final size:881
Alignment explanation
Indices: 16406398--16415129 Score: 6041
Period size: 883 Copynumber: 9.8 Consensus size: 881
16406388 ACTCCGTATG
* * * * *
16406398 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA-CGCACGAAACGAGTGT-CCGG-GTGCTC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG-ACGAAACGAGCGTGCGGGCGAGCAC
* * * *
16406460 -A-GCCGGCTAGAGGGGCGGGATGCGCAAGCCAG-GGATCGATAGGGTGGTAGGTGGGTTTAGGA
65 TACGCCGGCCAGAGAGACGGGATGCGCAAGCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
*
16406522 ACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
129 ACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
*
16406587 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
194 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
* * * * *
16406652 TTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTG
259 TTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GGCCCAAACTTGGTAGACGTG
* *
16406717 ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTT
323 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* * * *
16406782 GTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAA
388 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAA
* * *
16406847 ATTCTCAAATGCTCTTTAAGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTAT
453 AATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATAT
* *
16406912 AAGGGCCAAGTACTAGCACCCATCGCACATTATGTGCGCACA-CCCCCGG-CCCCCCGATCGTCG
518 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCG
* * * *
16406975 GAATCCCAATGCCACCGGTCAGGTTCTGCAGTGATGCTCCGACGATAGAGCCCCGACGAAGAAAA
583 GAACCCCAATGCCGCCGGTCA------G--GT--T-CTCCGACGATGGTGCCCCGACGAAGAAAA
* * * * * *
16407040 ATGCAGCACCAACACATGCCCGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTT
637 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACC-TCGGTCCGGTCCGATCTT
* *
16407105 AGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACG
701 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * *
16407170 AAACGAGTGTCCGGGTGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGGGT
766 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCGA-GGATCGGTCGGGT
* * * * * *
16407235 TCACCTCTGCATGCTGCCGATCCTACTGCCACAACCCTTGGT-TCGGT-TCGAT
830 CCCCCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTCGGTCT-GGTCT-GAT
* * *
16407287 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGATGAAACTAGCGTGCGGACGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGT--------GCGGG
* * * *
16407352 CGGGCACTACGCCAGCCAGAGAGATGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGT
58 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16407417 TTCA-GCACATCTTCATATCTCTACATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATG
123 TT-AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
16407481 GTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
187 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * * *
16407546 TAAACCTTTTGCGGTTCGGGATTTTTTAAAATTTTTTGGGAAGGAATTTTGGCCCCAAACTTGGT
252 GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACTTGGT
* * * * *
16407611 AGACGTGGTCCTTGTATTTTTTTTGGCAAGCACAAAAAAATTCATCAAAAAACTCGAAGTGTACA
316 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * * * *
16407676 AGATTTTGTGACCATTTGACATAAGCGTCCCCATTACAGACACTTTAATGGCTAATGGTAGCAAA
381 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAA
* *
16407741 CCTGTAAAATCTCAAGTGCTCTTTAAGGGGATGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGG
446 CCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
* * *
16407806 CTAATATAAGGACCAAGTACCAGCACCCATCGCACATTATGTGCGCACACCCCCCGGCCCCCCCG
511 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* * *
16407871 ATCGTCAGAACCCTAATGCCACCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
576 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* *
16407936 GGCACCAGCACATGCCCCAGCCCAGCATGTGCTGCCGTGAACCTTGGTCCGGTCCGATCTTAGAC
641 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT-AACCTCGGTCCGGTCCGATCTTAGAC
*
16408001 TGGGATTGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
705 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* ** * *
16408066 TAGCGTGCGGGCGCTCAGTTGGCCAGAGGGGCGGGATGTGCAAGTCGAGGATCGGTCGAGTCCCC
770 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CGAGGATCGGTCGGGTCCCC
* * *
16408131 CTCTGCGTGCTACCGATCCTGCTACCATAACCCTCAGTCTGGTCTGAT
834 CTCTGCGTGCTACCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGAT
* * *
16408179 CTTAGACTCGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGTGCGGGCGAGCATT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGTGCGGGCGAGCACT
* * * *
16408244 ATGCCGGCTAGAGAGACAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
66 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * *
16408309 ATCTTCATATTTCTACTTGCCAGTGCCATTTTTATGGCTTGTGAATTCATACAATGGTCCCTTAA
131 ATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
16408374 GCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTTTGAAACTTTT
196 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* * * *
16408439 TGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCTGAACTTGGTAAACGTGAT
261 TACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC-AAACTTGGTAGACGTGAT
* * *
16408504 CCTTGTATTTTTGTTGGCATGTACAAAAAAATTCAACTAAAAACTTGAAGTGTACAAGATTTTGT
325 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* **
16408569 GACCATTTGAAAAATGTGTCCTTATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAA
390 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAA
* *
16408634 TCTCAGATGCTCTTTAA-GGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATA
455 TCTCAAATGCTCTTTAAGGGGA-TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATA
*
16408697 AGGGCCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCCGGCCCCCCCGATCGTCGG
519 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGG
* * * * *
16408762 AACCCCAATACCGCCGGTCAGGTTCTTCGGCGATGGTGCCCCGATGAAGAAAAATGCGGTACCAG
584 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
* * * * * * *
16408827 CACATGCTCGAGCCCAGCATGTGCTACCGCAACCCTTGGTCTGATCCAATCTTAGACTGGGAATG
649 CACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CCTCGGTCCGGTCCGATCTTAGACTGGGAATG
* * *
16408892 AACTCCATATGCTTAGACTGGGAA-GAAACTCCGTATGCTTAAGTCAACCCATGAAACGAGCGTG
713 AACTCCGTATGCTTAGACTGGGAATG-AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * *
16408956 CGGGCGCTCAGCCGGGCAGA--------ATGTGCAAGCCGGGGATCGAG-CGGGTCCCCCTCTGC
777 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CGAGGATCG-GTCGGGTCCCCCTCTGC
* * * * *
16409012 GTGCTACCAATCCTGCTGTCGCAACCCTCAGTCTGGTCTAAT
840 GTGCTACCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGAT
* ** *
16409054 GTTAGACTGCTAATGCACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAGCGTGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-----CGAGCGTGCGGG
* * * * **
16409119 CGGGCACTACGCCGGCCAGAGAGACAGGATGCTCAAG-TGTGGATCGATAGCATGGTAGGTGGGT
58 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
16409183 TTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGG
123 TTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
16409248 CCACCTTAAGCCTTCTCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGACTTTT
188 TC-CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * * *
16409313 GAAACTTTTT-CGGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGACCCCAAACATGG
252 GAAACTTTTTAC-GGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG-GCCCAAACTTGG
* * * * ** ***
16409377 TAGACGTGATCCTTGTATTTTTTTTGGCTTGCAC----GACTTTTG--AAACTTTTTCG--G-GT
315 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA--AACTCGAAGTGT
* * * * * * ** * *
16409433 TCGAGATTTTTTTA-AATTTTTTTGGAAGGAGTTTTGACCCCAAACATGGT-AGACGTGATCCTT
378 ACAAGATTTTGTGACCA----TTTGAAAAAAG---TG-TCCC---CAT-TTCAGAC---A--CTT
*** ** * * *** *** * *
16409496 GT-ATTTTTTTTGGCTTGCACAA----AAAAAT-TC--A-GCT-AAAAACTTGAAGT--G-T-AC
426 -TAATGGCTACTGG-TAGCA-AACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTC
* ** ** * * ** ** * *
16409547 AAGATTCTG-TGA-CCAT---TTG--AA-A-AAGTGTCCTCA-TTTCAGACACTTTAATGGC-TA
488 AAGGTT-TGATGAGGGATAGGGGGCCAATATAAG-GGCC-AAGTACCAG-CAC--CCATCGCACA
* ******** * ** ** ***** * * *
16409601 -C-TG-GCAGCA-AACCTGTAAAATCTCAAAT-GCTCTTTAA-GGGGGTG-TG-AGTTCAAAGGT
547 TCATGTGC-GCACACCCCCCGGCCCCCCCGATCG-TC-GGAACCCCAATGCCGCCGGTC--AGGT
* * * * * * * * * * *
16409658 T-TCATGAGGGATAGG-G----GGCCAA-TATAA-G-GGC-CAAGTACCA-CCACCCATCGCACA
607 TCTC-CGA-CGAT-GGTGCCCCGACGAAGAAAAATGCGGCACCAGCA-CATGC-CCGA--GCCCA
* ** *** ** *** * * *
16409712 TCATGTGC-GCAC-TCCCCGTCTGG-CCCCCCCGATCGTCGGAAC-CCCAAT-ACCGCCGGTCAA
665 GCATGTGCTGC-CGTAACC-TC-GGTCCGGTCCGATC-TTAG-ACTGGGAATGAACTCC-GT-AT
** * * * * * ** * * ** *
16409772 G-TT-CTCCGGCG-ATGGTACCCCGACAAAGAAAAATACGTCACCAGCACATGCCCGAGCCCAGC
723 GCTTAGACTGG-GAAT-GAACTCCG--TATG---CCTAAGTCA--A-C-C---CACGAAACGAGC
* * * * ** ** ** * * * * *
16409834 ATGTGCTGCCG-TAACCCTCGGTCCAGTCCGATCTTAGACTGGGAAAGAACTCCA-TATGCTTAG
774 --GTGCGGGCGCTCA-GC-CGG-CCAG-AGGGGC-GGGA-TGCGCAAG----CGAGGAT-C--GG
* *** ** * ** ** ** * *
16409897 ACTGGGAAT-GAACTCTGTATGCCTA-AG-T-CAAC--CCACAAAACGAGCGTGTGGGC-G--
824 TC-GGG--TCCCCCTCTGCGTG-CTACCGATCCTGCTGCCACAACCCTCG-GTCTGGTCTGAT
* * ** ** * * * * * ***
16409951 CTCA-ACCGGCCA-GAAGGGCGGGATG-C---G-CAAGCCG-GGGAACGA-C---CGAGTCCCCC
1 CTTAGACTGGGAATGAA-CTCCGTATGCCTAAGCCAA-CCGACGAAACGAGCGTGCG-GGCGAGC
* * * * * * * * * * * ** * ** *
16410004 TCTGCGTGCTGTC-GA-TG-C-TGCTGCTGCAA-CCCT-CAGTCTGGTCTGATCTTAGACTGGG-
63 ACTACG-CCGGCCAGAGAGACGGGATGC-GCAAGCCGTGGA-TC-GATAGGGTGGTAG-GTGGGT
* * * * * * * * * * * ***** ** * *
16410062 -AATGAAC-TCCGTATGCCTAATCCAAC-TGACGAA-ACAAGTGGGCGGGCGGGCACTACTCTGG
123 TTAGGCACAT-C-T-T-CATATTTCTACGTG-CCAATGCCATTTTTATGGCTTGTA--AAT-T--
* * * * ** * * *** * * *
16410123 CGAGAGAGACGGGATGCGC--AAGCCGTGGATCGAT-AGGGTGGT-AGGTGGGTTTG--GGCACA
178 C-ATACA-A-TGG-T-CCCTTAAGCC-TTCA-CG-TGA-AGT-TTCA--T-GGCAAGACGACTCG
* * **** ** * * ** * ** *
16410182 TCTTCATATTTTTGCATG-CCAATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGTCCATTA
230 TTTTC-TATTTTT-CACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAAT--T---TT-
* * ** ** * ** *
16410245 AGCCTTC--ACGTGAAGTTTCATGG-CAAGACGAGTCATTTTCTATTTTTCATGATTTTTGAAAC
287 ----TTCGGAAG-G-AGTTT--TGGCCCA-A--A--C--TTGGTA---GACGTGATCCTTG-TA-
** * * * *
16410307 TTTTTG-TGGTTCGAGATTTTTTA-AAATTTTTTCAGAAGGAGTTTTAGCTGCAAAATTGGTAGA
332 TTTTTGTTGG--C---A---TGCACAAA-------A-AA--A--TTCAGCT-AAAAACTCG-A-A
* ** * * ***
16410370 CGTGATCCTTGTATTTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAGTGTACAAG
374 -GTG-TACAAG-A-----TTTT-G--TG-AC-----CATT----TGAAAA----AAGTGT-CCCC
** * ** * *
16410435 ATTTTGTGAC-CATTTGAAAAAAGTGTCCCCAT-TTCAGACACTTTAATGGCTACTGACAGCAAA
413 A-TTTCAGACAC-TTT-----AA-TGGCTAC-TGGT-AG-CA----AA---C--CTG-TA--AAA
* * * * * * * * ** * * * **
16410498 CCTGTAAAATCTCAAATGCTCTTTA-AGGAGGTGTGAGT-TCTTGAGGTT--TGATGAGAGATAA
455 --TCTCAAAT-GC---T-CT-TTAAGGGGATGTGAG-TTCTCAAG-GTTTGATGA-GGGATA-GG
** * *
16410559 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCTTACACCCCGCCAGCAC
508 G-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGGCCC
* * * * *
16410624 CCTCGATCGTCGGAACACCAATACCGCCGGTCAGGTTCTCCGGCAATGGTGCCCCGACGAAGAAA
571 CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAA
*
16410689 AATGCGGCACCAGCACATGCCCGAGCCCAGCAAGTGCTGCCGTAACC-C--T-C-G---G-TC--
636 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCTCGGTCCGGTCCGATCTT
*
16410743 ---C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCTTATGCCTAAGTCAACCCACG
701 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * *
16410794 AAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCAG-AAGTCGGGGATCAGTCGGG
766 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC-GCAAG-CGAGGATCGGTCGGG
* ** *** * *
16410858 TCCCCCTCTTCGTGCTGTCGATCCTGCTGGTGCAGCCCTCGGTCCGGTCTGAT
829 TCCCCCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGAT
** * * *
16410911 CTTAGACTTTGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG-GACGAGTGAGCAT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGTG-CGGGCGAGCAC
* * * * *
16410975 TATGCCGACCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTAGGTTTAGACA
65 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* * * *
16411040 CATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGTCTTGTGAATTCATACAACGGTCCCTTA
130 CATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * * * * * ** *
16411105 AGCCTTCACATGTAGCTTCATGGCAAGATGGCTCGTTTTCTATTTTTCACAATTTTCAAAACTCT
195 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
* * * *
16411170 TTGCGGTTTGGGATTTTTAAAAATTTTTTCGAAAGGAGTTTTGGCTCCAAACTTGGTAGACATGA
260 TTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC-CCAAACTTGGTAGACGTGA
* *
16411235 TCCTTGTATTTTTGTTGGCAAGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTG
324 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* * * *
16411300 TGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAACGCCTACTGGTAGTAAACCTGTAAA
389 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAA
* *
16411365 ATCTCAAATGTTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATA-GGGGCCAATATA
454 ATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATA
** * * *
16411429 AGGGCCAAGTATGAGCACCCATCACACATCATGTGTGCAAACCCCCCCCGGCCCCCCCGATCGTC
519 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC--ACACCCCCCGGCCCCCCCGATCGTC
* * ** *
16411494 AGAACCCCAATGCTGCCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCCCGGTGAGGAAA
582 GGAACCCCAATGCCGCCGGTCAGG-----T-----T-CTCCGACGATGGTGCCCCGACGAAGAAA
* * * * * *
16411559 AATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCAGTCCAATCT
636 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CCTCGGTCCGGTCCGATCT
* * * * *
16411624 TAGACTGGGAATGAACTCTGTATGCTTTGAATGGGAATGAACTCCGTATGCTTAAGTCAACGCAC
700 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * * * * *
16411689 GAAACGAACGTGCAGGCGCTCAGCCGGCCCAGAGGGGCTGGATGCGCAACCCGAGGATTGGTCGA
765 GAAACGAGCGTGCGGGCGCTCAGCCGG-CCAGAGGGGCGGGATGCGCAA-GCGAGGATCGGTCGG
* * * *
16411754 GTCCCCCTCTACGTGCTACCGATCTTACTGCCACAACCGTCGGTCTGGTCTGAT
828 GTCCCCCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGAT
* * * * *
16411808 CTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACTGACGAAACAAGTGGGCGGGC-AGGCAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGTGCGGGCGA-GCAC
* *
16411872 TACGCCGGCCAGAGAGACGGGATGCGCAAG-TGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCA
65 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* * *
16411936 CATCTTCGTATTTCTACGTGCCGATGCCATTTTTATGGCTTGTAAATTCATACAA-CGTCACCTT
130 CATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC-CCTT
* *
16412000 AAGCCTTCACGTGAAGTTTCATGGCGAGATGACTCGTTTTCTATTTTTCAC---------AA---
194 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
* ** *
16412053 -TT----TTT--G-------AAACTTTTTTCGGAAGGAGTTTTAACTCTAAACTTGGTAGACGTG
259 TTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC-CCAAACTTGGTAGACGTG
* * * * *
16412104 ATCCTTGTATTTTTGTTGCCATGCATAAAAAAATGCAGCTAGAAACTCGAAGTGCACAAG-TTTC
323 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT-
* * * * *
16412168 TATGACCATTTG-AAAAAGTGTCCCCATTTCAGACACGTTAATGGCTATTGGCAGCAAACCTATA
387 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTA
* * * **
16412232 AAATCTC-AATGCTGTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAAGCCAATA
452 AAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATA
* * * **
16412296 TAAGGGCCAAGTACCAGCACCCATCGGACATCATATGCGCACACCCCGCCCAGCCCCCCTTATCG
517 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC-CCCGGCCCCCCCGATCG
* * ** **
16412361 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCTGGTGAAGAAAAATGCATCA
580 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCA
* *
16412426 CCAGCACATGCTCGAGCCCAGCATGTGCTGTCGTAACC-C--T----T--G------G--T----
645 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCTCGGTCCGGTCCGATCTTAGACTGGGA
* * *
16412470 CTG-A-TCCG-ATG-TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAACG
710 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* *
16412531 TGCGGGTGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGTCGAGGATCGGTCGGGTCCCCCTCTG
775 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CGAGGATCGGTCGGGTCCCCCTCTG
* * * * * **
16412596 CCTGCTACCGATCCTACTGCCGCAACACTCGGT-TCGATCCAAT
839 CGTGCTACCGATCCTGCTGCCACAACCCTCGGTCT-GGTCTGAT
* * *
16412639 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAGCGGGCGGGCGGGCAGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGTGCGGGC--G-A-G
* * *
16412704 CACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAA
62 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
16412769 GAACATCTTCATATTTCTACATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAATGGTCCC
127 GCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
16412834 TTAAGCCTTCACGTGAAATTTCATGGCAGGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
192 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
* * *
16412899 TTTTTACGGTTTGGGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGCCCTAAACTTGGTAGACA
257 TTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC-AAACTTGGTAGACG
* * *
16412964 TGATCATTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATT
321 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * *
16413029 TTATGACCATTTGAAAAAAATTTCCCCATTTCAGACACTTTAATGGCTGCTGGTAGCAAACCTGT
386 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGT
* * *
16413094 AAAATCTCAAATCCTCTTTAAGGAGATGTGAGCTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
451 AAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
* * * ** * *
16413159 ATAAGGGCAAAGTAACAGCACCCATCGCACATCATGTGCG--C-CCCCTCATCCCCCCCAATCGC
516 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGT
* * * *
16413221 CGAAACCCAAATGCCGCAGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACAC
581 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * *
16413286 CAGCACATACCCGAGCCCAGTATGTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
646 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CCTCGGTCCGGTCCGATCTTAGACTGGGA
* * *
16413351 ATGAACTTCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCG
710 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * *
16413416 TGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGC-CTAAGCTGGGGATCTGCCGGGTCCCCCTCT
775 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC-AAGC-GAGGATCGGTCGGGTCCCCCTCT
* * * * * * * *
16413480 GTGTGCTGCCTATCATGCTGCTACAACCCTCGATCCGGTCCGAT
838 GCGTGCTACCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGAT
* * *
16413524 CTTAGACTGGGAATGAACTCCCTATTCCTAAGCCAACCGACGAAACGAGCGGGCGAACGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCG---TG-CGGG
* ** * *
16413589 CGGGCACTACATCGGCTAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
58 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
16413654 TTAGGCACATCTTCATATTTTTACGTGCCAATGCCATTTTTATGGCTTGAAAATTCATACAATGG
123 TTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
16413719 CCCCTTAAGCCTGCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGTTTTTTT
188 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG-ATTTTT
* * * * * * * **
16413784 AAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTCAGAAAGATTTTTGGGCCCAAAATTATT
252 GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GGCCCAAACTTGGT
* * * * **
16413849 AGACGTAATGCATGTATTTTTGTTGGCATGCACAAAAACATTCTTCTAAAAACTCGAAGTGTACA
316 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
16413914 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAA
381 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAA
* * * * *
16413979 CCTGCAAAATCTCAAATGCTCTTTAAGGAGG-TGTGATTTCTCGAGGTTTGATGAGGGAGAAGGG
446 CCTGTAAAATCTCAAATGCTCTTTAAGG-GGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
* ** **
16414043 GCCAATATAAGGGCCAAGTACTAGTGCCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCAT
510 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC
*
16414108 CGATCGTCGGAACCCCAATACCGCCGGTCAGGTTCTCCAGAATGCTCTGGCGATGGTGCCCCGAC
574 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-G-A--------CGATGGTGCCCCGAC
** * * *
16414173 GAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAACATGTGCTACTGTAACC-C--T-C-G--
629 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCTCGGTCCGGTC
* * *
16414231 -G----T---C------TG-A-TCCG-AT-CTTAGACTGGGAATGAAATCTGTATCCCTAAGTCA
694 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * ** * *
16414278 ACCCACGGAACGACCGTGCAAGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCAGGGATCG
759 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCGA-GGATCG
* * * * *
16414343 GTCGGGTCCCCATCTGCGTGCTACCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGAT
823 GTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGAT
* *
16414402 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCAG-GCAGGCGGGTAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GTGC-GG-GCG-A-
16414466 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
61 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
16414531 GGCACATCTTCATATTTTTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATATAATGGTCC
126 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * **
16414596 CTTAATCCTTCACATGAAGTTTCATGGCAAGACTACTCGTTTTCTATTTTTCACGATTTTCAAAA
191 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * *
16414661 CTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTTGGCACCAAACTTGGTAGGC
256 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC-CCAAACTTGGTAGAC
* * * *
16414726 GTGATCCTTGTATTTTTTTTGGCACGCAAAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGAT
320 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * * *
16414791 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATTGCTACTGGCAACAAACCTG
385 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTG
*
16414856 TAAAATCTCAAATGCTCTTTAAGGGG-TGTGGGTTCTCGAA-GTTTGATGAGGGATAGGGGGCCA
450 TAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTC-AAGGTTTGATGAGGGATAGGGGGCCA
* *
16414919 ATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGACCCCCCCGATC
514 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC
* * ** * * * * *
16414984 GTCGAAACGCCAATGGTGTCAGTCAGGTTCTCCGGCGATGCTGGTGCCCCGATGAAGAAAAATAC
579 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA---TGGTGCCCCGACGAAGAAAAATGC
* * * * * *
16415049 GGCATCGGCACATGCCCGAGCCCAACATGTGCTGTCGTAACCCTCGGTCCAGTCCCATCTTAGAC
641 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CCTCGGTCCGGTCCGATCTTAGAC
*
16415114 AGGGAATGAACTCCGT
705 TGGGAATGAACTCCGT
16415130 CTACCTAAGT
Statistics
Matches: 6091, Mismatches: 1183, Indels: 1138
0.72 0.14 0.14
Matches are distributed among these distances:
830 1 0.00
831 131 0.02
832 61 0.01
833 3 0.00
834 3 0.00
835 36 0.01
836 133 0.02
837 3 0.00
840 1 0.00
842 1 0.00
845 2 0.00
849 2 0.00
850 1 0.00
853 3 0.00
854 1 0.00
855 1 0.00
856 1 0.00
857 2 0.00
858 106 0.02
859 137 0.02
860 18 0.00
861 20 0.00
862 105 0.02
863 56 0.01
864 143 0.02
865 2 0.00
866 12 0.00
867 11 0.00
868 67 0.01
869 168 0.03
870 178 0.03
871 55 0.01
872 83 0.01
873 222 0.04
874 200 0.03
875 116 0.02
876 20 0.00
877 19 0.00
878 191 0.03
879 31 0.01
880 39 0.01
881 29 0.00
882 104 0.02
883 472 0.08
884 414 0.07
885 184 0.03
886 12 0.00
887 10 0.00
888 21 0.00
889 229 0.04
890 281 0.05
891 46 0.01
892 305 0.05
893 23 0.00
894 49 0.01
895 13 0.00
896 211 0.03
897 153 0.03
898 10 0.00
899 14 0.00
900 12 0.00
901 458 0.08
902 14 0.00
903 45 0.01
904 66 0.01
906 2 0.00
907 4 0.00
908 3 0.00
911 8 0.00
912 5 0.00
913 8 0.00
914 4 0.00
915 1 0.00
916 1 0.00
917 6 0.00
918 5 0.00
920 3 0.00
922 2 0.00
923 1 0.00
929 1 0.00
930 3 0.00
931 1 0.00
932 1 0.00
935 5 0.00
936 9 0.00
937 4 0.00
938 11 0.00
941 5 0.00
942 1 0.00
943 4 0.00
944 1 0.00
945 1 0.00
946 3 0.00
947 1 0.00
948 10 0.00
949 5 0.00
950 2 0.00
952 3 0.00
953 8 0.00
954 7 0.00
955 6 0.00
956 11 0.00
957 16 0.00
958 39 0.01
959 13 0.00
960 12 0.00
961 16 0.00
962 14 0.00
963 7 0.00
964 7 0.00
965 8 0.00
966 16 0.00
967 4 0.00
968 12 0.00
969 14 0.00
970 15 0.00
971 14 0.00
972 13 0.00
973 4 0.00
975 9 0.00
977 1 0.00
978 3 0.00
980 10 0.00
981 5 0.00
982 2 0.00
983 2 0.00
985 1 0.00
987 4 0.00
988 1 0.00
989 1 0.00
990 4 0.00
991 4 0.00
992 2 0.00
997 7 0.00
998 2 0.00
999 7 0.00
1000 13 0.00
1001 13 0.00
1002 15 0.00
1003 4 0.00
1004 3 0.00
1005 5 0.00
1006 14 0.00
1007 6 0.00
1008 8 0.00
1009 5 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (881 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGTGCGGGCGAGCACT
ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
ATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
TACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAACTTGGTAGACGTGATC
CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAAT
CTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAG
GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAA
CCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
CATGCCCGAGCCCAGCATGTGCTGCCGTAACCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTA
CCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGAT
Found at i:16408906 original size:26 final size:26
Alignment explanation
Indices: 16408877--16408932 Score: 87
Period size: 26 Copynumber: 2.2 Consensus size: 26
16408867 CTGATCCAAT
16408877 CTTAGACTGGGAATG-AACTCCATATG
1 CTTAGACTGGGAA-GAAACTCCATATG
*
16408903 CTTAGACTGGGAAGAAACTCCGTATG
1 CTTAGACTGGGAAGAAACTCCATATG
16408929 CTTA
1 CTTA
16408933 AGTCAACCCA
Statistics
Matches: 28, Mismatches: 1, Indels: 2
0.90 0.03 0.06
Matches are distributed among these distances:
25 1 0.04
26 27 0.96
ACGTcount: A:0.30, C:0.20, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAAGAAACTCCATATG
Found at i:16409272 original size:883 final size:882
Alignment explanation
Indices: 16406461--16409410 Score: 3889
Period size: 901 Copynumber: 3.3 Consensus size: 882
16406451 CGGGTGCTCA
* * * *
16406461 GCCGGCTAGAGGGGCGGGATGCGCAAGCCAG-GGATCGATAGGGTGGTAGGTGGGTTTAGGAACA
1 GCCGGCCAGAGAGACGGGATGCGCAAGCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
*
16406525 TCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
65 TCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
*
16406590 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT
130 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
* * * *
16406655 ACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCTTGGTAGACGTGATC
195 ACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GGCCCAAACTTGGTAGACGTGATC
16406720 CTTGTATTTTTTTTGGCATGCACAAAAAAATT-AAGCTAAAAACTCGAAGTGTACAAGATTTTGT
259 CTTGTATTTTTTTTGGCATGCACAAAAAAATTCAA-CTAAAAACTCGAAGTGTACAAGATTTTGT
* * * * *
16406784 GACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGGTAATGGCAGCAAACCTGTAAAT
323 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAA
* *
16406849 TCTCAAATGCTCTTTAAGGG-GTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATA
388 TCTCAAATGCTCTTTAAGGGAG-TGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATA
* *
16406913 AGGGCCAAGTACTAGCACCCATCGCACATTATGTGCGCACA-CCCCCGG-CCCCCCGATCGTCGG
451 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGG
* * * * *
16406976 AATCCCAATGCCACCGGTCAGGTTCTGCAGTGATGCTCCGACGATAGAGCCCCGACGAAGAAAAA
516 AACCCCAATGCCGCCGGTCA------G--GT--T-CTCCGGCGATGGTGCCCCGACGAAGAAAAA
* * * * * * *
16407041 TGCAGCACCAACACATGCCCGAGCCTAGCATGTGCTACCGCAACCATCGGTCCGGTCTGATCTTA
570 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGATCCGATCTTA
* *
16407106 GACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGA
635 GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * *
16407171 AACGAGTGTCCGGGTGCTCAGCC-GGCTAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGGGT
700 AACGAGCGTGCGGGCGCTCAGCCGGGC-AGA-------GATGCGCAAGCCGGGGATCGGTCGGGT
* * * * * * **
16407235 TCACCTCTGCATGCTGCCGATCCTACTGCCACAACCCTTGGT-TCGGT-TCGATCTTAGACTGGG
757 CCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCAGTCT-GGTCT-GATCTTAGACTGGG
* * * *
16407298 AATGAACTCCGTATGCCTAAGCCAACAGATGAAACTAGCGTGCG-GACGGGCGGGCGGGCACTAC
820 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAG-C-GGCGGGCGGGCACTAC
* * *
16407362 GCCAGCCAGAGAGATGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTCA-GCACA
1 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT-AGGCACA
* * *
16407426 TCTTCATATCTCTACATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
65 TCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
16407491 CCTTCACGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTTAAACCTTTT
130 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
* * * *
16407556 GCGGTTCGGGATTTTTTAAAATTTTTTGGGAAGGAATTTTGGCCCCAAACTTGGTAGACGTGGTC
195 ACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATC
* * *
16407621 CTTGTATTTTTTTTGGCAAGCACAAAAAAATTCATCAAAAAACTCGAAGTGTACAAGATTTTGTG
259 CTTGTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTG
* * * * *
16407686 ACCATTTGACATAAGCGTCCCCATTACAGACACTTTAATGGCTAATGGTAGCAAACCTGTAAAAT
324 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAAT
* ** *
16407751 CTCAAGTGCTCTTTAAGGG-GATGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGGCTAATATAA
389 CTCAAATGCTCTTTAAGGGAG-TGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAA
* * *
16407815 GGACCAAGTACCAGCACCCATCGCACATTATGTGCGCACACCCCCCGGCCCCCCCGATCGTCAGA
452 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGA
* * *
16407880 ACCCTAATGCCACCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
517 ACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
* * * * *
16407945 ACATGCCCCAGCCCAGCATGTGCTGCCGTGAA-CCTTGGTCCGGTCCGATCTTAGACTGGGATTG
582 ACATGCCCGAGCCCAGCATGTGCTACCGT-AACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
*
16408009 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGC
646 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * *
16408074 GGGCGCTCAGTTGGCCAGAGGGGC-GGGATGTGCAAGTCGAGGATCGGTCGAGTCCCCCTCTGCG
711 GGGCGCTCA----GCC----GGGCAGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCG
* ** *
16408138 TGCTACCGATCCTGCTACCATAACCCTCAGTCTGGTCTGATCTTAGACTCGGAATGAACTCCGTA
768 TGCTACCGATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
16408203 TGCCTAAGCCAACCGATGAAACGA----GC--G-TGCGGGCGAGCATTAT
833 TGCCTAAGCCAACCGACGAAACGAGCGGGCGAGCGGCGGGCGGGCACTAC
* * *
16408246 GCCGGCTAGAGAGACAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
1 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
16408311 CTTCATATTTCTACTTGCCAGTGCCATTTTTATGGCTTGTGAATTCATACAATGGTCCCTTAAGC
66 CTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
16408376 CTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTTTGAAACTTTTTG
131 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA
* * * *
16408441 CGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCTGAACTTGGTAAACGTGATCC
196 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC-AAACTTGGTAGACGTGATCC
* * *
16408506 TTGTATTTTTGTTGGCATGTACAAAAAAATTCAACTAAAAACTTGAAGTGTACAAGATTTTGTGA
260 TTGTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGA
* **
16408571 CCATTTGAAAAATGTGTCCTTATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATC
325 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATC
*
16408636 TCAGATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGG
390 TCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGG
*
16408701 CCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACC
455 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACC
* * * *
16408766 CCAATACCGCCGGTCAGGTTCTTCGGCGATGGTGCCCCGATGAAGAAAAATGCGGTACCAGCACA
520 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * * *
16408831 TGCTCGAGCCCAGCATGTGCTACCGCAACCCTTGGTCTGATCCAATCTTAGACTGGGAATGAACT
585 TGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* * *
16408896 CCATATGCTTAGACTGGGAA-GAAACTCCGTATGCTTAAGTCAACCCATGAAACGAGCGTGCGGG
650 CCGTATGCTTAGACTGGGAATG-AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* *
16408960 CGCTCAGCCGGGCAGA-ATGTGCAAGCCGGGGATCGAG-CGGGTCCCCCTCTGCGTGCTACCAAT
714 CGCTCAGCCGGGCAGAGATGCGCAAGCCGGGGATCG-GTCGGGTCCCCCTCTGCGTGCTACCGAT
* * * ** *
16409023 CCTGCTGTCGCAACCCTCAGTCTGGTCTAATGTTAGACTGCTAATGCACTCCGTATGCCTAAGCC
778 CCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
16409088 AACCGACGAAACGAGCGGGCGAGCGTGCGGGCGGGCACTAC
843 AACCGACGAAACGAGCGGGCGAGCG-GCGGGCGGGCACTAC
* * * **
16409129 GCCGGCCAGAGAGACAGGATGCTCAAG-TGTGGATCGATAGCATGGTAGGTGGGTTTAGGCACAT
1 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *
16409193 CTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGGCCACCTTAAG
66 CTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC-CCTTAAG
* *
16409258 CCTTCTCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGACTTTTGAAACTTTTT
130 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
* * * * *
16409323 -CGGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGACCCCAAACATGGTAGACGTGAT
195 AC-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG-GCCCAAACTTGGTAGACGTGAT
*
16409387 CCTTGTATTTTTTTTGGCTTGCAC
258 CCTTGTATTTTTTTTGGCATGCAC
16409411 GACTTTTGAA
Statistics
Matches: 1820, Mismatches: 193, Indels: 90
0.87 0.09 0.04
Matches are distributed among these distances:
875 113 0.06
876 2 0.00
879 5 0.00
881 1 0.00
882 89 0.05
883 433 0.24
884 405 0.22
885 1 0.00
887 1 0.00
888 2 0.00
892 265 0.15
893 5 0.00
895 2 0.00
896 3 0.00
897 1 0.00
899 1 0.00
900 2 0.00
901 448 0.25
902 9 0.00
903 32 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.27
Consensus pattern (882 bp):
GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
CTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA
CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAACTTGGTAGACGTGATCCT
TGTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGAC
CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCT
CAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGC
CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCC
CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
GCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTC
CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
CTCAGCCGGGCAGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCT
GCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACGAGCGGGCGAGCGGCGGGCGGGCACTAC
Found at i:16409485 original size:105 final size:105
Alignment explanation
Indices: 16409303--16409515 Score: 426
Period size: 105 Copynumber: 2.0 Consensus size: 105
16409293 TTCTATTTTT
16409303 CACGACTTTTGAAACTTTTTCGGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGACCC
1 CACGACTTTTGAAACTTTTTCGGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGACCC
16409368 CAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCTTG
66 CAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCTTG
16409408 CACGACTTTTGAAACTTTTTCGGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGACCC
1 CACGACTTTTGAAACTTTTTCGGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGACCC
16409473 CAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCTTG
66 CAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCTTG
16409513 CAC
1 CAC
16409516 AAAAAAATTC
Statistics
Matches: 108, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
105 108 1.00
ACGTcount: A:0.21, C:0.15, G:0.21, T:0.43
Consensus pattern (105 bp):
CACGACTTTTGAAACTTTTTCGGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGACCC
CAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCTTG
Found at i:16413377 original size:26 final size:26
Alignment explanation
Indices: 16413339--16413391 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16413329 CCGGTCTGAT
* *
16413339 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16413365 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16413391 C
1 C
16413392 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16415280 original size:864 final size:862
Alignment explanation
Indices: 16412052--16415292 Score: 3905
Period size: 864 Copynumber: 3.7 Consensus size: 862
16412042 ATTTTTCACA
* * * * ** *
16412052 ATTTTTGAAACTTTTTTCGGAAGGAGTTTTAACTCTAAACTTGGTAGACGTGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCTCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * * *
16412117 TGTTGCCATGCATAAAAAAATGCAGCTAGAAACTCGAAGTGCACAAG-TTTCTATGACCATTTG-
66 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT-TGTGACCATTTGA
* * *
16412180 AAAAAGTGTCCCCATTTCAGACACGTTAATGGCTATTGGCAGCAAACCTATAAAATCTC-AATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * **
16412244 TGTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAAGCCAATATAAGGGCCAAGTA
195 TCTTTAAGGAGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * ** *
16412309 CCAGCACCCATCGGACATCATATGCGCACACCCCGCCCAGCCCCCCTTATCGTCGGAACCCCAAT
260 CCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGAGCCCCCCCGATCGTCGAAACCCCAAT
* ** * ** *
16412374 GCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCTGGTGAAGAAAAATGCATCACCAGCACATGCTC
324 GCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCC
* * * *
16412439 GAGCCCAGCATGTGCTGTCGTAACCCTTGGT-CTGATCCGATGTTAGACTGGGAATGAACTCCGT
389 GAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAG-TCCGATCTTAGACTGGGAATGAACTCCGT
* * * *
16412503 ATGCCTAAGTCAACGCACGAAACGAACGTGCGGGTGCTCAGTCGGCCAGAGGGGCGGGATGCGCA
453 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * * * * * *
16412568 AGTCGAGGATCGGTCGGGTCCCCCTCTGCCTGCTACCGATCCTACTGCCGCAACACTCGGTTCGA
518 AGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCGCAACCCTCGGTTCGG
** * * * *
16412633 TCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAGCGGGCGGGCG
583 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGG-AGGCG
* *
16412698 GGCAGGCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGG
647 GGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
16412763 GTTTAAGAACATCTTCATATTTCTACATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAAT
712 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
16412828 GGTCCCTTAAGCCTTCACGTGAAATTTCATGGCAGGACGACTCGTTTTCTATTTTTCACGATTTT
777 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
**
16412893 TGAAACTTTTTACGGTTTGGG
842 CAAAACTTTTTACGGTTTGGG
* * * *
16412914 ATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGC-CCTAAACTTGGTAGACATGATCATTGTATTT
1 ATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCTCC-AAACTTGGTAGACGTGATCCTTGTATTT
* * *
16412978 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTATGACCATTTGA
65 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * * *
16413043 AAAAAATTTCCCCATTTCAGACACTTTAATGGCTGCTGGTAGCAAACCTGTAAAATCTCAAATCC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
16413108 TCTTTAAGGAGATGTGAGCTCTC-AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGT
195 TCTTTAAGGAGGTGTGAGTTCTCGAA-GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * * *
16413172 AACAGCACCCATCGCACATCATGTGCG--C-CCCCTC-ATCCCCCCCAATCGCCGAAACCCAAAT
259 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGAGCCCCCCCGATCGTCGAAACCCCAAT
* * * * *
16413233 GCCGCAGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATACCC
324 GCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCC
*
16413298 GAGCCCAGTATGTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTA
389 GAGCCCAGCATGTGCTGCCGTAA-CC-C--T-CGGTC----C----A----G--T---C--CG-A
* * *
16413363 TGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCAGGCGCTCA
429 T-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * ** *
16413428 GCCGGCCAGAGGGGCGGGATGC-CTAAGCTGGGGATCTG-CCGGGTCCCCCTCTGTGTGCTGCCT
493 GCCGGCCAGAGGGGCGGGATGCGC-AAGCCGAGGATC-GATCGGGTCCCCCTCTGCGTGCTATCG
* ** * * * * *
16413491 ATCATGCTGCTACAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCCTATTCCTAAG
556 ATCCTGCTGCCGCAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * ** *
16413556 CCAACCGACGAAACGAGCGGGCGAACGGACGGGCGGGCACTACATCGGCTAGAGAGACGGGATGC
621 CCAACCGACGAAACGAGC-AG-G-A-GG-CGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGC
* *
16413621 GCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACGTGCCAAT
681 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAAT
* * *
16413686 GCCATTTTTATGGCTTGAAAATTCATACAATGGCCCCTTAAGCCTGCACGTGAAGTTTCATGGCA
746 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * *
16413751 AGACGACTCATTTTCTATTTTTCACGTTTTTTTAAAACTTTTTACGGTTCGGG
811 AGACGACTCGTTTTCTATTTTTCACG-ATTTTCAAAACTTTTTACGGTTTGGG
* * * ** * * *
16413804 ATTTTTTTAAATTTTTTCAGAAAGATTTTTGGGC-CCAAAATTATTAGACGTAATGCATGTATTT
1 ATTTTTTAAAATTTTTTCAGAAAGAGTTTT-GGCTCCAAACTTGGTAGACGTGATCCTTGTATTT
* **
16413868 TTGTTGGCATGCACAAAAACATTCTTCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
65 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
16413933 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGCAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * *
16413998 TCTTTAAGGAGGTGTGATTTCTCGAGGTTTGATGAGGGAGAAGGGGCCAATATAAGGGCCAAGTA
195 TCTTTAAGGAGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* ** ** *
16414063 CTAGTGCCCATCGCACATCATGTGCGCACACCCCCCCG-GCCCCATCGATCGTCGGAACCCCAAT
260 CCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGAGCCCCCCCGATCGTCGAAACCCCAAT
* *
16414127 ACCGCCGGTCAGGTTCTCCAGAATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATATGGCACCA
324 GCCGCCGGTCAGG-T-T-C----T-C-C-GGCGATGGTGCCCCGACGAAGAAAAATACGGCACCA
* * * *
16414192 GCACATGCCCGAGCCCAACATGTGCTACTGTAACCCTCGGT-CTGATCCGATCTTAGACTGGGAA
379 GCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAG-TCCGATCTTAGACTGGGAA
* * * * * ** *
16414256 TGAAATCTGTATCCCTAAGTCAACCCACGGAACGACCGTGCAAGCGCTCAGCCGGCCAGAGGGGT
443 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * *
16414321 GGGATGCGCAAGCC-AGGGATCGGTCGGGTCCCCATCTGCGTGCTACCGATCCTGCTACCGCAAC
508 GGGATGCGCAAGCCGA-GGATCGATCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCGCAAC
* * *
16414385 CCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA
572 CCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
*
16414450 GCAGGCAGGCGGGTAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
637 GCAGG-AGGCGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
*
16414515 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACGTGCCAATGCCATTTTTATGGCTTGTAA
701 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAA
* * * *
16414580 ATTCATATAATGGTCCCTTAATCCTTCACATGAAGTTTCATGGCAAGACTACTCGTTTTCTATTT
766 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
*
16414645 TTCACGATTTTCAAAACTTTTTATGGTTTGGG
831 TTCACGATTTTCAAAACTTTTTACGGTTTGGG
* * *
16414677 ATTTTTTAAAATTTTTTCGGAAAGAGTTTTGGCACCAAACTTGGTAGGCGTGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCTCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
16414742 TTTTGGCACGCAAAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
66 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
16414807 AAAAGTGTCCCCATTTCAAACACTTTAATTGCTACTGGCAACAAACCTGTAAAATCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
16414872 CTTTAAGG-GGTGTGGGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGAGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * *
16414936 CAGCACCCATCACACATCATGTGCGCACACCCCCCGA-CCCCCCCGATCGTCGAAACGCCAATGG
261 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGAGCCCCCCCGATCGTCGAAACCCCAATGC
* * * * * *
16415000 TGTCAGTCAGGTTCTCCGGCGATGCTGGTGCCCCGATGAAGAAAAATACGGCATCGGCACATGCC
326 CGCCGGTCAGGTTCTCCGGCGA---TGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCC
* * * *
16415065 CGAGCCCAACATGTGCTGTCGTAACCCTCGGTCCAGTCCCATCTTAGACAGGGAATGAACTCCGT
388 CGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * * * * *
16415130 CTACCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTTAGCCAGCCAGAGGGTG-AGGATGCGT
453 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG-GCGGGATGCGC
* * *
16415194 AAGCCGAGGATCGACCGGGTCCCCCTCTGTGTGGC-ATCGATCCTGCTGCCGTAACCCTCGGTTC
517 AAGCCGAGGATCGATCGGGTCCCCCTCTGCGT-GCTATCGATCCTGCTGCCGCAACCCTCGGTTC
16415258 GGTGC-GATCTTAGACTGGGAATGAACTCCGTATGC
581 GGT-CTGATCTTAGACTGGGAATGAACTCCGTATGC
16415293 TTAGACTGGG
Statistics
Matches: 2034, Mismatches: 277, Indels: 134
0.83 0.11 0.05
Matches are distributed among these distances:
859 98 0.05
860 3 0.00
861 11 0.01
862 108 0.05
863 58 0.03
864 310 0.15
865 7 0.00
868 1 0.00
869 2 0.00
870 1 0.00
871 36 0.02
872 79 0.04
873 199 0.10
874 178 0.09
875 2 0.00
876 2 0.00
877 3 0.00
878 180 0.09
879 3 0.00
880 2 0.00
881 1 0.00
882 1 0.00
883 2 0.00
884 3 0.00
885 178 0.09
886 4 0.00
887 1 0.00
888 2 0.00
889 174 0.09
890 268 0.13
891 6 0.00
892 1 0.00
894 36 0.02
895 1 0.00
896 1 0.00
897 1 0.00
899 4 0.00
900 1 0.00
901 1 0.00
902 2 0.00
903 3 0.00
904 60 0.03
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (862 bp):
ATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCTCCAAACTTGGTAGACGTGATCCTTGTATTTT
TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
CTTTAAGGAGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
CAGCACCCATCGCACATCATGTGCGCACACCCCCCGAGCCCCCCCGATCGTCGAAACCCCAATGC
CGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGA
GCCCAGCATGTGCTGCCGTAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
CGAGGATCGATCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCGCAACCCTCGGTTCGGTCT
GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGAGGCGGGCA
GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAA
ACTTTTTACGGTTTGGG
Found at i:16415302 original size:26 final size:26
Alignment explanation
Indices: 16415266--16415318 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16415256 TCGGTGCGAT
*
16415266 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16415292 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16415318 C
1 C
16415319 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:16415421 original size:185 final size:185
Alignment explanation
Indices: 16415107--16415477 Score: 507
Period size: 185 Copynumber: 2.0 Consensus size: 185
16415097 CCAGTCCCAT
* * * * *
16415107 CTTAGACAGGGAATGAACTCCGTCTACCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTTAGC
1 CTTAGACAGGGAATAAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGTACGAGCACTCAGC
* *
16415172 CAGCCAGAGGGTGAGGATGCGTAAGCCGAGGATCGACCGGGTCCCCCTCTGTGTGGCATCGATCC
66 CAGCCAGAGGGTGAGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGGCATCGATCC
* * ** *
16415237 TGCTGCCGTAACCCTCGGT-TCGGTGCGATCTTAGACTGGGAATGAACTCCGTATG
131 TACTACCACAACCCTCGGTCT-GGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16415292 CTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGCACTCAGT
1 CTTAGACAGGGAATAAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGTACGAGCACTCAGC
* * *
16415357 CGGCCAGAGGG-GCGGGATGCGCAAGCC-AGGGATCGACCGGGTCCCCCTCTGCGT-GCTGTCGA
66 CAGCCAGAGGGTG-AGGATGCGCAAGCCGA-GGATCGACCGGGTCCCCCTCTGCGTGGC-ATCGA
*
16415419 TCCTACTACCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTCGTATG
128 TCCTACTACCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
16415477 C
1 C
16415478 CTAAGCCAAC
Statistics
Matches: 163, Mismatches: 19, Indels: 8
0.86 0.10 0.04
Matches are distributed among these distances:
184 4 0.02
185 158 0.97
186 1 0.01
ACGTcount: A:0.23, C:0.29, G:0.29, T:0.20
Consensus pattern (185 bp):
CTTAGACAGGGAATAAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGTACGAGCACTCAGC
CAGCCAGAGGGTGAGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGGCATCGATCC
TACTACCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16416846 original size:26 final size:26
Alignment explanation
Indices: 16416817--16416893 Score: 136
Period size: 26 Copynumber: 3.0 Consensus size: 26
16416807 GGTCTGATCT
*
16416817 TAGACTGGGAATGAACTTCGTATGCA
1 TAGACTGGGAATGAACTCCGTATGCA
*
16416843 TAGACTGGGAATGAACTCCGTATGCG
1 TAGACTGGGAATGAACTCCGTATGCA
16416869 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16416894 CTAAGTCAAC
Statistics
Matches: 49, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 49 1.00
ACGTcount: A:0.29, C:0.18, G:0.29, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCA
Found at i:16418632 original size:26 final size:26
Alignment explanation
Indices: 16418596--16418648 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16418586 CTAGTCCGAT
16418596 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
16418622 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
16418648 C
1 C
16418649 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.17, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCTGTATG
Found at i:16419035 original size:887 final size:889
Alignment explanation
Indices: 16416031--16421357 Score: 6456
Period size: 887 Copynumber: 5.9 Consensus size: 889
16416021 CCCTCCAACA
* * ** * *
16416031 GGGTCCCCCTATGCGTGCTGTCGATCCTACTGCCGCAACCCTTGGTCCGGTCTGATCTTAGACTG
1 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACTG
* * *
16416096 GGAATGAACTCCATATGCCTAAGCCAACCGATGAAATGAGCGGGCAGGCGGGCAGGAGGGCACTA
66 GGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGC-GGCGGGCGGGC----GGGCACTA
* *
16416161 TC-TCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
126 -CGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
*
16416225 ATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAA
190 ATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * *
16416290 GCCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCTATTTTTCACGATTTTCAAAACTTTT
255 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTT
* * * *
16416355 TGCAGTTC-GAGATTTTTTAAAA-TTTTTCGGAAGGAGTTTTGGCCCTCAAAAC-TAGTAGACGG
320 TACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCC-C-AAACTTGGTAGAC-G
* * * *
16416417 TGATCCTTGTATTTTTGTTCGCATCGCATAAAATATTCAGCTAAAAACTCGATGTGTACAAGATT
381 TGATCCTTGTATTTTTGTTGGCAT-GCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
16416482 TTGTGACCCATTCGAAAAAAGTGTCCCCATTTTCAGACCACTTTAATGGCTACTGGCAGCAAACC
445 TTGTGA-CCATTTGAAAAAAGTGTCCCCA-TTTCAGA-CACTTTAATGGCTACTGGCAGCAAACC
* * *
16416547 TGATAAAATATCAAGTGCCTCTTTAAGGGGGTGTAAGTTCTCGGAGGTTTTGATGAAGGGAATAG
507 T-ATAAAATCTCAAATG-CTCTTTAAGGGGGTGTGAGTTCTC-GAGG-TTTGATG-AGGG-ATAG
* *
16416612 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAAATAATGTGCGCACA-CCCCCCGGCCC
566 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGG-CC
* *
16416676 CCCCGATCGCCAAAACCCCAATGCCATCGGTCAGGTTCTCCGATGATGCTTCGGTGATGGTGCCC
630 CCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCG--GA----TC---GATGGTGCCC
** *
16416741 CGGTGAAGAAAAA-AGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGC-AACTGTCGG
686 CGACGAAGAAAAATA-CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAAAC---C--
* * *
16416804 TCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCATAGACTGGGAATGAACTCCGTATGCG
745 T-C-G---G-TC-T--A----G--T---C--CG-AT-CTTAGACTAGGAATGAACTCCGTATGCT
* * *
16416869 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCACTCAGCCG
788 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCG
* * * * *
16416934 GCCAAAGGGG-TAGGATGCAT--AAGTCGGGGATCGGTC
853 GCCAGAGGGGCGA-GATGC-TGCAAGCCGAGGATCGATC
* * * * * ** * ** * *
16416970 GAGTCCGCCTCTACATGCTGTCGATCCTACTGCCGCAACTTTCGGTTTGATCCAATCTTAGACTA
1 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACTG
* * * * * * * *
16417035 GGAATGAACTCTGTATGCCGAAGCGAACCGAGGAAATGAGCGGGCGGGTGGGCGGTCACTACACC
66 GGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGC-GGCGGGCGGGCGGGCACTACGCC
**
16417100 GGCCAGAGAGACGACATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
16417165 CATATTTTTTTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
195 CATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
*
16417230 CACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG
260 CACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
* * * *
16417295 TTTAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTTGTAGACGAGATCCTTG
325 TTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
16417360 TATTTTTTTTTGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
390 TATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
* * *
16417425 TTGAAAAAAGTGTCCCCATTTCAAACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAATCTCAA
455 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAA
* * *
16417490 ATGCTCTTTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGCGGGCCAATATAAGGGCAA
520 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * * *
16417554 AGTACCCGCACCCATCGCACATCATGTGCGCACAACCCCTCGGCCCCCCTGATCGCCGGAACCCC
585 AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC-GATCGCCGAAACCCC
* * *
16417619 AATGTCGTCGGTCAGGTTCTCCGGTGATGCTCCGGTGATGGTGCCCCGGCGAAGAAAAATGCGGC
649 AATGCCGTCGGTCAGGTTCTCC-G-GA---T-C---GATGGTGCCCCGACGAAGAAAAATACGGC
* *
16417684 ACCAGCACATGCCCGAGCCCAGCATGTGCT-GC-CAAAAC-C---CT-G---GATC-----C---
705 ACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAAACCTCGGTCTAGTCCGATCTTAGACTAG
* *
16417731 G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCCTATGCCTAAGTCAACCCCCGAAACGAG
770 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* *
16417788 CGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATG-TGCAAGCCGGGGATCGATC
835 CGTGCGGGCGCTCAGTCGGCCAGAGGGGCGAGATGCTGCAAGCCGAGGATCGATC
* * * * *
16417842 GGGTCCCCCACTACGTGCTGCCGAAT-TTGCTGCCGCAACCCTCAGTCCGGTCTAATCTTAGACT
1 GGGTCCCCCTCTGCGTGCTGTCG-ATCCTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACT
* * * * *
16417906 GGGAATGAACTCTGTATGCCTAAACCAACCGACGAAACGA---GTGGGCGGACGGGCACTACGCC
65 GGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGCGGGCGGGCGGGCACTACGCC
*
16417968 GGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * **
16418033 CATATTTCTGTGTGCCAATGCCATTTTTATAGCTTGTAAATTCATACTGTGGTCCCTTAAGCCTT
195 CATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * *
16418098 CACGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCAAGATTTTTGAAACTTTTTACGG
260 CACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
* * * * * * *
16418163 TTCGGGATTTTTTAAGATCTTTTCAGAAAGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTT
325 TTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
16418228 TATTTTTGTTGGCAGGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
390 TATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
16418293 TTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACGGGCAGCAAACCTATAAAATCTCA
454 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCA
* *
16418357 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCATGAGGGATACGGGGCCAATATAAGGGCC
519 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
16418422 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGTG-CCCCCGATCGCCGGAACCC
584 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-GCCCCCCGATCGCCGAAACCC
* * * **
16418486 CATTACCGCCGGTCAGGTTCTCC-GA-CGATGGTGCCCCGGTGAAGAAAAATACGGCACCAGCAC
648 CAATGCCGTCGGTCAGGTTCTCCGGATCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCAC
* * * * * * *
16418549 TTGCCTGACCCCGGCATGTGCTGCCGCAACCCTTGGTCTAGTCCGATCTTAGACTAGGAATGAAC
713 ATGCCCGAGCCCAGCATGTGCTACCGCAAACCTCGGTCTAGTCCGATCTTAGACTAGGAATGAAC
* * * * *
16418614 TCTGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGG
778 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* **
16418679 CGCTCAGTCGGCCAGAGGGGTGAGATGCTG-AAGCTTAGGATCGATC
843 CGCTCAGTCGGCCAGAGGGGCGAGATGCTGCAAGCCGAGGATCGATC
* * * *
16418725 GGGTCCCCATCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCCGATCAAATCTTAGACTG
1 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACTG
*
16418790 GGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGGTGGGCGGGCACTACGCC
66 GGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGG-CGGGCGGGCGGGCACTACGCC
* *
16418855 GGCCATAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * * * *
16418920 TATATTTCTACGTGCGAGTGCCATTTTTATGGCTTGTAAATTCATACAATGGCCCCTTAAGCCTT
195 CATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * **
16418985 CACGTGAAGTTTCATGGCAAGACGATTCATTTTTTATTTTTCATGATTTTTGAAACTTTTTGTGG
260 CACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
** * * * * *
16419050 TTCAGGATTTTTTAAAATTTTTTTGGAAGGCGTTTTGGCCCCAAACTTTGTTGACGTGATACTTT
325 TTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * **
16419115 TATTTTTGTAGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTGCAAGATTTTGCAACCA
390 TATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * *
16419180 TTTGAAAAAAGTGTCCCCATTTCAGACCCTTTAATGGCTACAGGCAGCAAACCTGTAAAATCTCA
454 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCA
* *
16419245 AATGCTCTTTACA-GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGC
519 AATGCTCTTTA-AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * *** * *
16419309 CAAGTACTAGCACCCATCACACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCATTGGAGCCC
583 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGAAACCC
* **
16419373 TAATGCCACCGGTCAGGTTCTCCGG--CGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCAC
648 CAATGCCGTCGGTCAGGTTCTCCGGATCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCAC
* * * * * *
16419436 ATGCCCAAACCCAGCATGTGCTACCACAAACCTCGGTCCAGTCTGATCTTAGACTGGGAATGAAC
713 ATGCCCGAGCCCAGCATGTGCTACCGCAAACCTCGGTCTAGTCCGATCTTAGACTAGGAATGAAC
* * * * **
16419501 TCCGTATGCTTGGACTGGGAATAAACTCCGTATGCTTAAGTCAACACACGAAATAAGCGTGCGGG
778 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * *
16419566 CGCTTAGCCGGCCAGAGGGACGAGATGC-GCAAGCCGAGGATTGGTC
843 CGCTCAGTCGGCCAGAGGGGCGAGATGCTGCAAGCCGAGGATCGATC
* * * * **
16419612 GGGTCCCCCTCTGCATGCTGCCGATCCTGCTACTGCAACCCTCAGTCCGATCGGATCTTAGACTG
1 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACTG
* * ** * * * **
16419677 GGAATGAACTCCGTATGCCTAAGTCGACTAATGAAACGA---GTGGGTGGGCGGGAACTACGTTG
66 GGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGCGGGCGGGCGGGCACTACGCCG
* *
16419739 GCCAGAGAGACGGGATGCGCAAGCCATCGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
131 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
16419804 ATATTTCTATGTGTCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTC
196 ATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* ** *
16419869 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTAAAAC-TTTTATGGT
261 ACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGT
* * * *
16419933 TCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCACAAAACTTGGCAGACGTGATCCTTGT
326 TCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* *
16419998 AATTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCAT
391 ATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
16420063 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAA
455 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAA
* * * *
16420128 ATGCTCTTTAAGGGGGTATGAGTTCTTGAGGTTTGATGAGGGATAGAGGGCAAATATAAGGGCCA
520 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * * * *
16420193 ACTACCGGCACCCATCGCACATCATGTGCACAACCCCCCCCCCCGCGGCCCCCCCGATCGTCGAA
585 AGTACCAGCACCCATCGCACATCATGTGCGC-A---CACCCCCC-CGG-CCCCCCGATCGCCGAA
*
16420258 ACCCAAATGCCGTCGGTCAGGTTCTCCGATGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAAT
644 ACCCCAATGCCGTCGGTCAGGTTCTCCG--GA-----T--CGATGGTGCCCCGACGAAGAAAAAT
* ** * * * *
16420323 GCAACACCAGTACATGCCCTAGCCCAGCATGTGCTTCCGCAAACCTCGGTCTGGTCCGATCTTAG
700 ACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAAACCTCGGTCTAGTCCGATCTTAG
* * *
16420388 ACTAGGAATGAACTCCCTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGGA
765 ACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * *
16420453 ACGAGCGTACGAGCACTCAGTCGGCCAGAGGGGCGGGATG-TGCAAGCCGAGGATC-AGTC
830 ACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGAGATGCTGCAAGCCGAGGATCGA-TC
* * * * * * *
16420512 GGGCCCCCCTCTGCGTGCTG-CTGATCTTGCTGCCACAACCCTCAGTCTGGTCTAGTCTTAGATT
1 GGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACT
*
16420576 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCATGCGTGCACT
65 GGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGC-GGCGGGCGGGC--G-G-GCACT
* *
16420641 ACACCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
125 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* *
16420706 ATCCTCATATTTCTATGTGCCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAA
190 ATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * *
16420771 GCCGTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTT
255 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTT
* * ** *
16420836 TGCAGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACCTGGTAGACGTGAT
320 TACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * *
16420901 CCTTGTATTTTTGGTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTCTGT
385 CCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* * *
16420966 GACCATTTGAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGTCAGCAAACCTGTAAAA
449 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAA
* * * *
16421031 TATCAAGTGCTCTTTAAGGGGGTGTAAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAA
514 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* *
16421096 GGGCCATGTACCAGCACCAATCGCACATCA--TGCGCACAACCCCCCCCGGCCCCCTCGATCGCC
579 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-A-CCCCCCCGGCCCCC-CGATCGCC
*
16421159 GAAACCTCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCTGGCGATGGTGCCCCGACGAAGAAA
641 GAAACCCCAATGCCGTCGGTCAGGTTCTCCG--GA-----T--CGATGGTGCCCCGACGAAGAAA
* * * * * * * * *
16421224 AATGCAGCACCAGCGCATGCCCGAGCCCAGAATGTGCTACCGTAACCCTCGGTTTGGTCTGATCT
697 AATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAAACCTCGGTCTAGTCCGATCT
* * **
16421289 TAGACTAGGAATGAACTCCTTATGCTTAGACTAGGAATGAACTTTGTATGCCTAAGTCAACCCAC
762 TAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
16421354 GAAA
827 GAAA
16421358 TGATTTTGTG
Statistics
Matches: 3849, Mismatches: 451, Indels: 211
0.85 0.10 0.05
Matches are distributed among these distances:
857 53 0.01
858 1 0.00
859 4 0.00
860 1 0.00
863 2 0.00
864 1 0.00
865 2 0.00
867 4 0.00
868 371 0.10
869 141 0.04
870 2 0.00
872 170 0.04
873 4 0.00
874 4 0.00
875 1 0.00
877 1 0.00
878 1 0.00
880 1 0.00
881 4 0.00
882 274 0.07
883 366 0.10
884 3 0.00
886 4 0.00
887 629 0.16
888 154 0.04
889 40 0.01
890 1 0.00
891 1 0.00
899 1 0.00
900 268 0.07
903 6 0.00
904 200 0.05
905 6 0.00
906 2 0.00
907 6 0.00
908 182 0.05
909 264 0.07
916 1 0.00
920 1 0.00
922 1 0.00
923 62 0.02
924 106 0.03
925 8 0.00
926 3 0.00
927 14 0.00
928 8 0.00
929 12 0.00
930 27 0.01
931 6 0.00
932 21 0.01
933 43 0.01
934 27 0.01
935 213 0.06
936 24 0.01
939 97 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (889 bp):
GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACTG
GGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGCGGGCGGGCGGGCACTACGCCG
GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
ATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
ACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGT
TCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
ATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAA
TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGAAACCCCAA
TGCCGTCGGTCAGGTTCTCCGGATCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATG
CCCGAGCCCAGCATGTGCTACCGCAAACCTCGGTCTAGTCCGATCTTAGACTAGGAATGAACTCC
GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
TCAGTCGGCCAGAGGGGCGAGATGCTGCAAGCCGAGGATCGATC
Found at i:16419527 original size:26 final size:26
Alignment explanation
Indices: 16419487--16419537 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16419477 TCTGATCTTA
*
16419487 GACTGGGAATGAACTCCGTATGCTTG
1 GACTGGGAATAAACTCCGTATGCTTG
16419513 GACTGGGAATAAACTCCGTATGCTT
1 GACTGGGAATAAACTCCGTATGCTT
16419538 AAGTCAACAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.20, G:0.27, T:0.27
Consensus pattern (26 bp):
GACTGGGAATAAACTCCGTATGCTTG
Found at i:16421711 original size:400 final size:401
Alignment explanation
Indices: 16420958--16421757 Score: 1278
Period size: 400 Copynumber: 2.0 Consensus size: 401
16420948 AAGTGTACAA
* *
16420958 GATTCTGTGACCATTTGAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGTCAGCAAAC
1 GATTCTGTGACCATTTCAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * *
16421023 CTGTAAAATATCAAGTGCTCTTTAAGGGGGTGTAAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
66 CTATAAAATATCAAATGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGAGGGATAGAGGGC
* * *
16421088 CAATATAAGGGCCATGTACCAGCACCAATCGCACATCATGCGCACAACCCCCCCCGGCCCCCTCG
131 CAATATAAGAGCCAAGTACCAGCACCAATCGCACATCATGCGCACAACCCCCCCCGGCCCCCCCG
* *
16421153 ATCGCCGAAACCTCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCTGGCGATGGTGCCCCGACG
196 ATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCTGACGATGGTGCCCCGACG
* * **
16421218 AAGAAAAATGCAGCACCAGCGCATGCCCGAGCCCAGAATGTGCTACCGTAACCCTCGGTTTGGTC
261 AAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGAATGTGCTACCGTAACCCTCGGTCCGGTC
*
16421283 TGATCTTAGACTAGGAATGAACTCCTTATGCTTAGACTAGGAATGAACTTTGTATGCCTAAGTCA
326 CGATCTTAGACTAGGAATGAACTCCTTATGCTTAGACTAGGAATGAACTTTGTATGCCTAAGTCA
16421348 ACCCACGAAAT
391 ACCCACGAAAT
*
16421359 GATTTTGTGACCATTTCAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
1 GATTCTGTGACCATTTCAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
16421424 CTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGC
66 CTATAAAATATCAAATGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGAGGGATAGAGGGC
* *
16421489 CAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCACAA-CCCCCCCGGCCCCCCCG
131 CAATATAAGAGCCAAGTACCAGCACCAATCGCACATCATGCGCACAACCCCCCCCGGCCCCCCCG
* * * *
16421553 ATTGCCGAAACCCCAATGCTGTCGGTCAGGTTCTCCGACGATGCTTTGACGATGGTGCCCTGACG
196 ATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCTGACGATGGTGCCCCGACG
** * **
16421618 AAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGGTC
261 AAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGAATGTGCTACCGTAACCCTCGGTCCGGTC
* * *
16421683 CGATCTTAGACTGGGAATGAACTCCTTATGCTTAGACTGGGAATGAACTTTGTATGCCTTAGTCA
326 CGATCTTAGACTAGGAATGAACTCCTTATGCTTAGACTAGGAATGAACTTTGTATGCCTAAGTCA
*
16421748 ACCCATGAAA
391 ACCCACGAAA
16421758 CGAGCGTACG
Statistics
Matches: 364, Mismatches: 35, Indels: 1
0.91 0.09 0.00
Matches are distributed among these distances:
400 201 0.55
401 163 0.45
ACGTcount: A:0.26, C:0.27, G:0.23, T:0.24
Consensus pattern (401 bp):
GATTCTGTGACCATTTCAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
CTATAAAATATCAAATGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGAGGGATAGAGGGC
CAATATAAGAGCCAAGTACCAGCACCAATCGCACATCATGCGCACAACCCCCCCCGGCCCCCCCG
ATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCTGACGATGGTGCCCCGACG
AAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGAATGTGCTACCGTAACCCTCGGTCCGGTC
CGATCTTAGACTAGGAATGAACTCCTTATGCTTAGACTAGGAATGAACTTTGTATGCCTAAGTCA
ACCCACGAAAT
Found at i:16421738 original size:26 final size:27
Alignment explanation
Indices: 16421687--16421744 Score: 84
Period size: 26 Copynumber: 2.2 Consensus size: 27
16421677 CCGGTCCGAT
16421687 CTTAGACTGGGAATGAACTCCTTATG-
1 CTTAGACTGGGAATGAACTCCTTATGC
*
16421713 CTTAGACTGGGAATGAACT-TTGTATGC
1 CTTAGACTGGGAATGAACTCCT-TATGC
16421740 CTTAG
1 CTTAG
16421745 TCAACCCATG
Statistics
Matches: 29, Mismatches: 1, Indels: 3
0.88 0.03 0.09
Matches are distributed among these distances:
25 1 0.03
26 23 0.79
27 5 0.17
ACGTcount: A:0.26, C:0.17, G:0.24, T:0.33
Consensus pattern (27 bp):
CTTAGACTGGGAATGAACTCCTTATGC
Found at i:16422640 original size:26 final size:26
Alignment explanation
Indices: 16422589--16422641 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16422579 CCGGTCCGAT
**
16422589 CTTAGACTGGGAATGAACTCTTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16422615 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16422641 C
1 C
16422642 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16423143 original size:902 final size:896
Alignment explanation
Indices: 16421359--16434122 Score: 8824
Period size: 902 Copynumber: 14.3 Consensus size: 896
16421349 CCCACGAAAT
* * *
16421359 GATTTTGTGACCATTTCAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* * *
16421424 CTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGC
65 CTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAG-GGGC
* *
16421489 CAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCACAACCCCCCCGGCCCCCCCGA
129 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAACCCCCCCAG-CCCCCCGA
* * ** * *
16421554 TTGCCGAAACCCCAATGCTGTCGGTCAGGTTCTCCGACGATGCTTTGACGATGGTGCCCTGACGA
193 TCGCCGAAACCCCAATGCCGTCGGTCAGGTTCT-CGA-GATGCTCCGGCGATGGTGCCCCGACGA
* * * *
16421619 AGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGGTCC
256 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGTCC
* ** *
16421684 GATCTTAGACTGGGAATGAACTCCTTATGCTTAGACTGGGAATGAACTTTGTATGCCTTAGTCAA
320 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * * *
16421749 CCCATGAAACGAGCGTACGGGCGCTCTGTCGGCCAGAAGGGCGGGATGTGCAAGCCGAGGATCGA
385 CCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATAGG
* * * * * *
16421814 TCAGGTCCCCTTCTGCATGCTGTCGATCTTGCTGTCGTAACCCTCGGTCCCGGTCTAGTCTTAGA
450 TCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGT-CCGATCTAGTCTTAGA
* * * *
16421879 TTGGGAATGAACTCCGTATGCCTAAGGCAACCGACGAAATGAGTGGGCGGGCGGGCACGCGTGCA
514 TTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGCG-GCA
* * *
16421944 CTACGCCAGCTAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
578 CTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *
16422009 ACATCTTCATATTTGTATGTGCCAATGCCATTTTTTTGGGTTGTAAATTCATACAATGGTCCCTT
643 ACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* * * **
16422074 AAGCCTTCACGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAGGT
708 AAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTT
* * *
16422139 TTTGCAGTTC-AGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAACTTGGTAGACGT
773 TTTACAGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* ** ** * *
16422203 GATCCTTATATTTTTGTTCACATCCATAAAAAAATTCAGCTAAAAACTCGATGTGTACAA
837 GATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
16422263 GATTTTGTGACCATTTGAAAAAAGTGTCCCAATTCAGAAACTTTAATGGCTACTGGCAGCAAACC
1 GATTTTGTGACCATTTGAAAAAAGTGTCCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAACC
* * * *
16422328 TGTAAAATATCAAGTGCTCTTTAAGGGGGTGT-AGGTTCTCGAGGTTTGATTAGGGATAGGGGAC
66 TGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGA-GTTCTCGAGGTTTGATGAGGGATAGGGG-C
*
16422392 CAATATAAGGGCCAAGTACCAGCACCAATCGCACATCATGTGCACAACCCCCCCAGCCCCCCGAT
129 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAACCCCCCCAGCCCCCCGAT
*
16422457 CGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAA
194 CGCCGAAACCCCAATGCCGTCGGTCAGGTTCT-CGA-GATGCTCCGGCGATGGTGCCCCGACGAA
* * *
16422522 GAAAAATGCAGCACCAGCACATTG-CCGAGCCTAGCATGTGCTGCCGCAACCCTCAATCCGGTCC
257 GAAAAATGCGGCACCAGCACA-TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGTCC
**
16422586 GATCTTAGACTGGGAATGAACTCTTTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
320 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * *
16422651 CACATGAAACGAGCGTACGGGGCACTCAACCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATAG
385 CCCATGAAACGAGCGTAC-GGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATAG
* *
16422716 GTCGGGTCCCCCTCTGCATGTTGTCGATCTTGCTGCCGCAACCCTCGGTCCGATCTAGTCTTAGA
449 GTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAGTCTTAGA
* * *
16422781 TTGGGAATGAACTTCGTATGGCTAAGCCAACCGACGAAACAAGCGGGCGGGCGGGCGCGCGTGCA
514 TTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGCG-GCA
* *
16422846 CTACGTCGGCCAGAGAGACAGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGC
578 CTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* *
16422911 ACATCTTCATATTTCTACGTGCCAATGCCATTTTTATTGCTTGTAAATTCATACAATGGTCCCTT
643 ACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* *
16422976 AAGGCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTT
708 AAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTT
* *
16423041 TTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTG
773 TTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
*
16423106 ATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAA
838 ATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * *
16423165 GATTTTGTGACCATTTGAAAAAAGTGTCCCATTTCAGACACATTAATTGCTACTGGCAGCAAACC
1 GATTTTGTGACCATTTGAAAAAAGTGTCCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAACC
* *
16423230 TGTAAAATCTCAAATGCT-TTTCAAGGAAGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
66 TGTAAAATCTCAAATGCTCTTT-AAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGC
* * *
16423294 CAATATAAGGGCTAAGTACCCGCACCCATCGCACATCATGTGTGCAC-ACCCCCCGA-CCCTCCC
129 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA--TGTGCACAACCCCCCCAGCCC-CCC
* * * *
16423357 AATCTCC-AGAACCCCAATGCCG-C---C--G-T-TC-AGGTTCTCCGGCGATGGTGCCCCGACG
191 GATCGCCGA-AACCCCAATGCCGTCGGTCAGGTTCTCGAGATGCTCCGGCGATGGTGCCCCGACG
* *** *
16423412 AAGAAAAATGCGGCACAAGCACATGATTGAGCCCAGCATGTGCTGCTGCAA-CC-C-T-C-G---
255 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCCGGTCC
16423469 G----T---CT----A-G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
320 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * ** * * * * *
16423517 CCCACGAAATGAGTGTGTGGGCGCTCAGCCGGCCACAGGGGCGGGATGCGCAAGACGGGGGTCGG
385 CCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATAGG
* * * * * ** * * *
16423582 TCGGGTCCCCCTCCGCATGCTGTTGATCCTACTACCGCAACCCTTGGTTGGATCCAATCTTAGAC
450 TCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAGTCTTAGAT
* * * * ***
16423647 TGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAATGAGCGAGCGGATAGGCGCGCGGGCAC
515 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGC-GGCAC
*
16423712 TACGTCGGCCAGAGAGACAAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
579 TACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* *
16423777 CATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGGTCCCTTA
644 CATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * * * *
16423842 AGCCTTCACGTGAAGTTTCACGACAAGATGAC-CG--TTGTA-TTTTCACGA--TT-GAAACCTT
709 AGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTT
* * * *
16423900 TTATCGGCTT-G-GA-TTTTT--AA-TTTTT---AAGGCGTTTT-GCCGCCCAAC-TGGTAGTC-
774 TTA-CAG-TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC-CCAAACTTGGTAGACG
* * * *
16423953 T-ATCATTG--TTTTT-TT-GCATAAAGCCAAAAAATT-GGC-AAAAACTCGACAGTGTTACAA
836 TGATCCTTGTATTTTTGTTGGCATGAA-CAAAAAAATTCAGCTAAAAACTCGA-AGTG-TACAA
* * * * *
16424010 GAGTTTGTGACATATTTAGAAAAAAGT-TCCGCA-TTC-CAAACGTCTAA-GTG-T-CTTG-AGC
1 GATTTTGTGAC-CATTT-GAAAAAAGTGTCC-CATTTCAGAAAC-TTTAATG-GCTACTGGCAGC
* * *
16424068 AAACCTATAAAATCTCAAATGCTC-TT---GGAATGTGAG-T-TC-A--TTTGAGTTA-GGATAG
61 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGA-TGAGGGATAG
* * * *** * *
16424123 GGGGC-ATA-AAGGGCC-AGT-CTAGCACCCATCG-ACA--AAG-GCACCGTCCTCCC-GACCCC
125 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAACCCCCCCAGCCCCC
* * ** * * *
16424179 TG-TCGCCCG-CACCCCACATTTC-TCGGTCA-GTTCTCGAGATG-TCCTGGAGATCGTGCCCGG
190 CGATCG-CCGAAACCCCA-ATGCCGTCGGTCAGGTTCTCGAGATGCTCC-GGCGATGGTGCCCCG
* * * ** *
16424239 ACCAAAAAAAAT-CGGCATCAGCA-ATG--CGA--CCAGCATGTGCTATCGC-A-CCTCTTCCGG
252 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCCGG
* * * *
16424296 TCTGATCTTAGACTGGGAATGAGCTTCGTATGCTTAGACTGGGAATGAACTGCGTATGCCTAAGT
317 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * ** * *
16424361 CGACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCTAGAGGGGCGGGATACGTAAGCCGGAGAT
382 CAACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGAT
** * *** * *
16424426 CA-ACCGGGTTCCCCTCTATGTGCTG-CTGATCCTGCTGCTGCAACCCTCGGTCTGATCT-GATC
447 -AGGTCGGGTCCCCCTCTGCATGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCCGATCTAG-TC
* * *
16424488 TTAGACTGGGAATGAATTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCAGGC
509 TTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC--GC
*
16424553 GGGCAGGCGGGTACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
572 --GC-GGC----ACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * *
16424618 GGTGGGTTTAGGCACATCTTCGTATTTCTATGTGCCAATGCCATTTTTATGGCTTGTTAGTTCAT
630 GGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * *
16424683 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGATGACTCATTTTCTATTTTTCACG
695 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACG
** * *
16424748 ATTTTTGAAACTTTTTGCAGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
760 ATTTTCAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * * *
16424813 ATTGGTAGACGTGATCCTTGTCTTTTTGTTGGCATGCACAAAAACATTCTA-CTAAAAATTCGAA
825 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTC-AGCTAAAAACTCGAA
16424877 GTGTACAA
889 GTGTACAA
16424885 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA-AACACTTTAATGGCTACTGGCAGCAAA
1 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAA-ACTTTAATGGCTACTGGCAGCAAA
* *
16424949 CCTGTAAAATCTCGAATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
64 CCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGG
* * *
16425014 CCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCACCCGGCCCCCC
128 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACA-ACCCC-CCCAG-CCCCC
* * * * **
16425079 CGATCGCCGGAACCCTAATGCTGCCGGTCAGG---T-----T-CTCCGGCGATGGTGCCCCGGTG
190 CGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCGAGATGCTCCGGCGATGGTGCCCCGACG
* * * *
16425135 AAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCCCAACCCTCGGTCCAGT-
255 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGTC
* * *
16425199 CGTTCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTGCGTACGCCTAAGTCA
319 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * * *
16425264 ACCCATGAAATGAGCGTGCGAGCGCTCAGCAGACCAGAAGGGCGGGATGTGCAAGCCAGGGAT-C
384 ACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATAG
* * * * * * * * *
16425328 GACTGAGTCCCCCTCTACCTGCTG-CGAATCCTGTTGCCGTAACCCTCGGTCCGGTCCAATCTTA
449 GTC-GGGTCCCCCTCTGCATGCTGTCG-ATCCTGCTGCCGCAACCCTCGGTCCGATCTAGTCTTA
* *
16425392 GATTGGGAATGAGCTCCGTATGCCTAAGCCAACCGATGAAACGA----GCGGGC-GG-GCG-GGC
512 GATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGCGGC
* *
16425450 ACTACGTCGGCCAGAGAAACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
577 ACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
**
16425515 CACATCTTCATATTTCTGCGTGCCAATGCC------A-------T---TT--TACAATGGTCCCT
642 CACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * ****** * * * **
16425562 TAAGCTTTCTCGT----TTTC-C-ATTTTTC-A-T-GATTTTCAAAACTTTTT-ATG--GTTCGG
707 TAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCG-TTTTC--TA-TTTTTCACGATTTTCAA
* * *
16425615 GA-TTTTT----TT--A-A--ATTT----TT---TCGGAAGGAGTTTTGGCCCGAAACTTGGTAG
768 AACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* *
16425663 ACGTGATCCTTGTATTTTTGTTGGCACGCTA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
833 ACGTGATCCTTGTATTTTTGTTGGCATG-AACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * * *
16425727 GATTTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGTAGCAAA
1 GA-TTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAA
* *
16425792 CCTGTAAAATCTCAAATGCTCTTTAAGGG-GTGTGAGTTTTCGAAGTTTGATGAGGGATAGGGGG
64 CCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGG
* * *
16425856 CCAATATAAGGGCCAAGTACCAGCACCCATCGCATATCATGTGCTCACACCCCCCCGGCCCCCTC
128 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACA-ACCCCCCCAGCCCCC-C
* * * * * *
16425921 GATCGTCGGAACCCCAAGGCCGTCAGTCAGGTTCTCTG-GCAATG-TCCGACGATGGTACCCCGA
191 GATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTC-GAG--ATGCTCCGGCGATGGTGCCCCGA
* * * *
16425984 TGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGTAACCCTTGGTCCGG
253 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC-TCGTCCGG
* * *
16426049 TCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATACCTAGGT
317 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * *
16426114 CAACCCATG-AACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGGGATGCGTAAGCCGAGGAT
382 CAACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGAT
* ** * * * * * *** * * * * *
16426178 CGACCGGGTCCTCTTCTACGTGCTGTCGATCTTGCTATTGTAACCCTTGGTCCAATCCAATCTTA
447 AGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAGTCTTA
* ** * * * *
16426243 GACTGGGAATGAACTCTATATGCCTAAGCCAATCGATGAAACAAGCGGGCGGGTGGGCAG-GCGG
512 GATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC-GCGC-G
* * * *
16426307 GCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGTATCGATAGGGTGGTAGGTGGGTTTA
575 GCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
16426372 GGCACATCTTCATATTTTTGA-GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
640 GGCACATCTTCATATTTCT-ATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * * **
16426436 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGGCTCGTTTTCTATTTTTCATGATTTTTGAA
704 CCTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAA
** * * *
16426501 ACTTTTTAGGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTCGCCCCAAACTTGGTAGA
769 ACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * * *
16426566 CGTGATCCTTGTCTTTTTGTTGGCATGCACAAAAACATTCAGGTAAATACTCGAAGTGTACAA
834 CGTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
16426629 GATTTTGTGACCATTTGAAAAAAGTGTCTCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGTC-CCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* * * * * *
16426694 CTGTAAAAACTCAATTGGTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGAGATAGGCGGC
65 CTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG-GGC
* * * * *
16426759 CAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACAGCGCCCCGGCCCCCTCG
129 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACA-ACCCCCCCAGCCCCC-CG
* * * * * *
16426824 ATCACTGGAACCCCAATGTCGCCGGTCAGG---T-----T-CTCCGGTGATGGTGCCCCGACGAA
192 ATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCGAGATGCTCCGGCGATGGTGCCCCGACGAA
* * *
16426880 GAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGTAA-CC-C-T-CGGTCC--
257 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCCGGTCCGA
*
16426939 -C---G--T----A--AA------AT-CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACC
322 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
** * * * * * * *
16426985 CCCGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGTCAGGGATCGGTC
387 CATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATAGGTC
* * * ** * * *
16427050 GGGTCCCCCTATGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAATCCGGTCT-GAACTTAGACT
452 GGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAG-TCTTAGATT
** *
16427114 GGGAATGAACTTTGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGGGCGAGCGGGCGGG
516 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC--GC--GC-GG
* * * * *
16427179 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGACGTGTATCGATAGGATGGTAGGTGGGTTTAG
576 CACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
*** * * *
16427244 GCACATCTTCATATTTCTGCATGCCAATGCAATTTTTATGCCTTGTAAATTCATATAATGGTCCC
641 GCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * **
16427309 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTCTATATTTTTCACGATTTTTGAAAC
706 TTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAC
* * * * * * *
16427374 GTTTTGCGGTTC-AGGATTTTTTAAAATTTTTTTGAAAGGATTTTTGG-CCCAAACTTGATAGAC
771 TTTTTACAGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * **
16427437 ATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTAAAGTGTACAA
835 GTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
** * *
16427499 GATTTTGTGATGATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* * *
16427564 CTGTAAAATCTCAAATGCTTTTTAAGGG-GTGTCAGTTCTTGAGGTTTGATGAGGGATAGGGGAC
65 CTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG-C
* *
16427628 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC-ACACCCCCCGGCCCCCTCG
129 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAAC-CCCCCCAGCCCCC-CG
* * * * *
16427692 ATCGTC-AGAACCCCAAAGCCGTCGGTCAGGTTCTCCGGTGATGCTTCGACGATGGTGCCCCGAC
192 ATCGCCGA-AACCCCAATGCCGTCGGTCAGGTTCT-C-GAGATGCTCCGGCGATGGTGCCCCGAC
* * ** * **
16427756 AAAGAAAAATACGGCACCAGCACATGCCCGAAACCAGCATGTGCTGCTGCAACCCTCGATCTAGT
254 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-TCCGGT
* * * *
16427821 CCGATCTTAGACTGGGAATGAACTCTGTATGCTTATAATGGGAATGAACTCTGTATGCCTAAGTC
318 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * * *
16427886 AACGCACGAAACGAGCGTGCGGGCGCTCAACCGACCAGAGGGGCGGGATGCGCAAGTC-GGG-TT
383 AACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATA
* * ** * * * * *
16427949 TGACTGGGTCCCCCTCTGTGTGCTGTCGATCCTGCCGCCGTAACCCTCGATCC-AGTCCAATCTT
448 GGTC-GGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGA-TCTAGTCTT
* * * * * *
16428013 AGACTGGGAATAAACTTCGTATCCCTAAGCCAACCAACGAAACGAGCGGGTGGGCGGGCGGGCGG
511 AGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC----GGGCGGGCGGGCGC
* * * ** *
16428078 GCGGTTCACAATACGCCAGCCAGATAGATGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
572 GCGG--CAC--TACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
***
16428143 GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
633 GGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * * * * * *
16428208 ATTGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGATGACTCATTCTCTATTTTTCATGATT
698 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATT
** * * *
16428273 TTTGAAACTTTTTACGATTTAG-GATTTTGTAAAATTTTTTCGGAAGGAGTTTTGGCCCCCAAAC
763 TTCAAAACTTTTTAC-AGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCCAAAC
* * * * *
16428337 TTGGCAGGCGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGC
826 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGT
16428402 GTACAA
891 GTACAA
* * * *
16428408 GATTTTATGACCATTTGAAAAAAATGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* *
16428473 CTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
65 CTGTAAAATCTCAAATGCTCTTTAA-GGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGG
* * *
16428538 CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGC-ACACCCCCCGGCCCCCCG
128 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAAC-CCCCCCAGCCCCCCG
** * *
16428602 ATCATCGAAACCCCAATGCCG-CAGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTG-CCCGAC
192 ATCGCCGAAACCCCAATGCCGTC-GGTCAGGTTCT-C-GAGATGCTCCGGCGATGGTGCCCCGAC
* * * * * *
16428665 GAAGAAAAATACGGCACCAGCAAATGCCCGAGCCTAGCATGTGCTACCGCAACCCTCGGTCTGCT
254 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGT
* * * * * **** * * *
16428730 CCGATCTTAGACTAGGAATAAACTCTGTATGCCTAAGCCAACCAACGAA--ACG-A-G-C---GG
318 CCGATCTTAGACTGGGAATGAACTCCGTATG-CTTAGACTGGGAATGAACTCCGTATGCCTAAGT
** ** * ** * * * * *
16428787 C-AGGC-TG--GTGGGCGGGCGGTGCGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTG
382 CAACCCATGAAACGAGCGTACGG-GCGCTC-A-GCCGGCCAGAGGGGCGGGATGTGCAAGCCG-G
* ***** ** * *
16428848 GATCGATAGGGTGGTAGGTGGGTTTAGGCACAT-CT-TCATATTTCTGCATG-C-CAA---T--G
443 G---GATA-GGTCG--GGTCCCCCTCTG--CATGCTGTC-GA-TCCTGC-TGCCGCAACCCTCGG
* ** ** * * * * ***
16428904 -CC-AT-T--T-TTATGGCTTGTAAATTCA-TAC-AATTGTCCCTTAAGCCTTCACCTGAAGTTT
497 TCCGATCTAGTCTTA--GATTGGGAATGAACTCCGTA-TG--CC-TAAGCC--AACC-GACGAAA
* ** ** * * **** **** * **** * **
16428961 C-A--TGGCAAGATGACTC-CTTTTCTA--TTTTTCATGATTTTTGAAACTTTTTACG--ATTC-
553 CGAGCGGGCGGGCGGGCGCGCGGCACTACGTCGGCCA-GA-----GAGACAGGATGCGCAAGCCG
* * * *** ** * ** * * * ** ** * *
16429017 AGGATTTTGTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTA-GAC-GTGAT-CC-TT
612 TGGA--TCG-ATAGGGTGGTAG-GTGG-GTTTAGG-CAC-ATCTTCATATTTCTATG-TGCCAAT
* * * * * * * * *
16429078 G-TATTTTTTTTGGCATGCACAA---A-ACAAT--TCAGCTAAAACCTCCAAGTGTGCAAGATTT
669 GCCA-TTTTTATGGCTTGTA-AATTCATACAATGGTC-CCTTAAGCCTTC-A-CGTG-AAG-TTT
*** * * *** ** ** * *** * ** ** ** * **
16429136 TGTGACCATTTGAACAAGTGTCCCCATTTCAGAC-ACTTT-AATGGCTACTGGCAGTAAACCTGT
727 CACGGCAAGACG-ACTCGT-TTTCTATTTTTCACGATTTTCAA-AACTTTTTACAGT--TCGAG-
*** * * * * ***** * * * * *
16429199 AAAATCTCAAATGCTTTTTAAGG-GGTGTCAGTTCTTGAG-GTTTGA-TGAGGGATAGGGGA-CC
786 ATTTTTTAAAAT--TTTTT-CGGAAG-G--AGTT-TTG-GCCCCAAACT-TGGTAGACGTGATCC
* * ** * * * *** * * **
16429260 ---AATATAAG--GGCCAAGTACCAGCACCCA-TC-GC---ACA-TC-ATGTGCGCACA
842 TTGTATTTTTGTTGG-CATG-AACA-AAAAAATTCAGCTAAAAACTCGAAGTGTACA-A
****** * * *** * *** *** * *
16429307 CCCCCCG-GCCCCCCGATCGTCGGAACCCCATTG-CCGCCGGTCAGGTTCTCTGACGAT-GCTCC
1 GATTTTGTG---ACC-AT--T-TGAA-AAAAGTGTCC-CATTTCAGAAACT-TTA--ATGGCTAC
* * * * * * * *** * ** * ***
16429369 GATGAAGAAAAATGCGACACCAGCACAAGCTCGAGCCCAGCTTGTGCTGTCGCAACCCTCG-GTC
54 --TG--G---CA-GC-AAACCTGTAAAATCTCAAATGC-TCTT-T-AAG--G-GAGTGT-GAGT-
* ** * * *** * * **
16429433 TGGTCCGATCTTAGACT-AGGAAT-GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
102 T-CT-CGAGGTTTGA-TGAGGGATAG-GGGCC-AAT--ATA-A--GGG--CCAA----GTA--CC
* * * * * * * * ** *** **
16429496 TAAGTCAACTCAT-GAAACAAGCGTGCGGGCTCTTAGCCGGCCAGAGGGGCGGGATGTGCAAGCT
149 --AG-C-ACCCATCG-CAC-ATCAT--GTGCAC--AACC-CCCCCAGCCCCCCGA--T-C--GC-
* * * ** * * **
16429560 GGTGATCCTGCTATCGATCCTACTGCCACCAGTCAGGTTCCCGGACGATGCTCCGATGATGGTGC
197 CG-AAACC--C---C-A----A-TGCCGTCGGTCAGGTTCTC-GA-GATGCTCCGGCGATGGTGC
* * * * * *
16429625 CCGGGCTAAGAAAAATGTGGCACCAGCCCATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGA
248 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-
* * *
16429690 TCCGGTCCGATCCTAGACTGGGAATGAACTTCGTATGCTT-GACTAGGAATGAACTCCGTATGCC
312 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * *
16429754 TAAGTCAACCCATGAAACGATCGTGCGGGCGTTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCA
377 TAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCG
* * * * ** * *
16429819 GGGATCA-GCCGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTATCGCAACCCTCGATCCGAT-TT
442 GGGAT-AGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTA
* * * * * * * * *
16429882 GATCTTGGACTGGGTATGAACTTCGTATGCCTAAGCCAACTGATGAAACGAGTGAGCGGGCGGAC
506 G-TCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC
* * * * *
16429947 GGGCGGGAACTACGACGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTTGTAGGTG
570 GCGC-GGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * ***
16430012 TGTTAAGGCACATCTTCATATTTCGGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
634 GGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * * * **** *
16430077 TGGTCCCCTAAGCCTTCACATAAAGTTTCATGGCAAGACGACTCGTTAAGGAGTTTTCAC-----
699 TGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * ** * ** *** *** * ** ** ** **
16430137 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCA--TGCAC-AAAAAAAATTCAGCCAA
764 TCAAAACTT--TTTACA-G-TTCGAG-A-TTTT-TTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * ** * *** * ** **
16430199 AAAC-TCG-A-A-GTG-TACAAG-A-TTTTG-TGACCAT-TTGAAAAAAGTGTC--C--CCATTT
822 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTG-GCATGAACAAAAAAAT-TCAGCTAAAAACT
16430251 C--A--G-AC-A
885 CGAAGTGTACAA
* ** * * * * ** * ** *** **
16430257 -CTTTAATGGCTACTGGCAGCAAA-----CC-TGT-A-AAATCTCAAAT-GCT-CTTTAAG--GG
1 GATTTTGTGACCATTTG-AAAAAAGTGTCCCATTTCAGAAA-CTTTAATGGCTACTGGCAGCAAA
** * ** * * * * *** ** *
16430309 GGTGTGAGTTCTC-AA-G--GTTTGA-TGAG-G-GA----T--AGG--GGGCCA-ATATAAGGGC
64 CCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGC
** ** * * * * * **** * * * * *
16430358 CAAGTACCAGCACCCA-T--C-GTACATCATGTGCTCA-CAACCCCCCCAGCCCCCC-GATCGCC
129 CAA-TATAAGGGCCAAGTACCAGCAC-CCAT-CGCACATCATGTGCACAACCCCCCCAG-CCCCC
* * * * ** ** * * * *
16430417 GGAAC-CCTAATGTCGTCGGT-CAGGTTC--TCCGAGGATGCTCTGGCGATTG-TGCC-CCGA--
190 CGATCGCCGAA--ACCCCAATGC-CG-TCGGT-C-AGG-T--TCTCGAGA-TGCT-CCGGCGATG
*** ** ** ** * * * **
16430474 ---CGAAGAAAAATTCAGCA-CCAGCA-CATGCCCGA-GCCC-AG-CAT----GTGCTGCCGCAA
244 GTGCCCCGACGAA-GAAAAATGCGGCACCA-GCAC-ATGCCCGAGCCCAGCATGTGCTGCCGCAA
* * * * * *
16430527 CCCTCAGCCCGGTCCGATCTTAGACTAGGAATAAACTTCGGATGCTTAGACTGGGAATGAACTCT
306 CCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
* * * * * * * * * * *
16430592 GTATGCCTATGTCAACCCACGAAATGGGCATGCGAGCGCTCAACTGGCAAGAGGGGCGGGATGCG
370 GTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTG
* * * * * * * * *
16430657 CAAGCCAGGGATCGGCCGGGTCTCCCTCTACGTGCTGTCGATCCTGCTGTCACAACCCTCGGTCT
435 CAAGCCGGGGATAGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCC
* * *
16430722 GGTCT-GATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTG-CTGAAACGAGCAGGTG
500 GATCTAG-TCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-GAAACGAGC--G-G
* * *
16430785 AGCGGGCGGG-GCG-GGCACTACGTCGGCCAGAGAGACGGGATCCGCATGCCGTGGATCGATAGG
560 -GCGGGCGGGCGCGCGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGG
* * ** *
16430848 GTGGTGGGTGGGTTTAGGCACATCCTCATATTTCTGCGTGCCAATGACATTTTTATGGCTTGTAA
624 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAA
* *
16430913 ATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
689 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTT
** * * * * *
16430978 TTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTGAATATTTTTTCGAAAGGAG-TTTGG-
754 TTCACGATTTTCAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
* * *
16431041 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTCGCATGCAA-AAAAAAATTCAGCTAAAAC
819 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG-AACAAAAAAATTCAGCTAAAAA
*
16431105 CTCTAAGTGTACAA
883 CTCGAAGTGTACAA
* * *
16431119 GATTTTGTGACCATTTGAAAAACGTGTCGCCATTTCAGACACGTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGTC-CCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* *
16431184 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
65 CTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGC
* *
16431249 CAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAA-CCCCCCGGCCCCCCC
129 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT--GCACAACCCCCCCAG-CCCCCC
*** * * * * * **
16431313 GATCAATGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCTGGCGATGGTGCCCCGGT
191 GATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCT-C-GAGATGCTCCGGCGATGGTGCCCCGAC
* *
16431378 GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGCCCGGT
254 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGT
* * * *
16431443 CCGATCTTAGATTAGGAATAAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
318 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * *
16431508 AACCCACGAAACGAGCGTGCGGGTGTTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC
383 AACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATA
* *** * * * *
16431573 GGCCGGGTCCCCCTCTATTTGCTATCGATCCTGCTGCCACAACCCTCGGTCTGGTCT-GATCTTA
448 GGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAG-TCTTA
* * * * * *
16431637 GATTGGGAATGAACTCCATATGCCTAAGCCAACTGATGAAACAAGCGGGCGAGCGGGCGGGCGGG
512 GATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGC-GG
* * * * *
16431702 CACCACGTCGGCCAGAGAGACGGGATCCGCAAGCCGCGGATCGATAGGGTGGTGGGTGGGTTTAG
576 CACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
*** *
16431767 GCACATCTTCATATTTCTGCATGCCAATGTCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
641 GCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * *
16431832 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGACTTTT-GAAA
706 TTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAA
** * * * *
16431896 CTTTTTGTAGTTCGGGATTTTTTAATATTTTTTCGGAAGGAGTTTTGG-CCCAAACCTGGTCGAC
770 CTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * * *
16431960 ATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACCTCTAAGTGTACAA
835 GTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * *
16432022 GATTTTGTGACCATCTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* *
16432087 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
65 CTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGC
* **
16432152 C-ATGATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGTGCACAACCCCCCTGGCCCCCC
129 CAAT-ATAAGGGCCAAGTACCAGCACCCATCGCACATCA--TGTGCACAACCCCCCCAG-CCCCC
* * * * * * *
16432216 CGATCGCCGGAACCCTATTGCCGCCGGTCAGGTTCTCCAACGATGCTCTGGCGATGGTGCCCCGG
190 CGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCT-CGA-GATGCTCCGGCGATGGTGCCCCGA
* ** * * * *
16432281 TGAAGAAAAATATGACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGTAACCCTCGGCCCGG
253 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGG
* * * *
16432346 TCCGATCTTAGACTGGGAATAAACTCTGTATGCTTAGATTGGGAATGAACTTCGTATGCCTAAGT
317 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
** * * * *
16432411 CAACCCACAAAACGAGCGTACGGGCGCTCTGCAGGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT
382 CAACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGAT
* * * * * * * * * *
16432476 CGGTCGGTTCCCCTTCTACCTGCTGTTGATCCTACTACCACAACCCTCGGTCCGGTCT-GATCTT
447 AGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAG-TCTT
* * * *
16432540 AGATTGGGAATGAACTCCGTATGCCTAAGCCAACTGATGAAACGAGCGGGCGAGCGGGCGGGCGG
511 AGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGC-G
* * *
16432605 GCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGTGGTGGGTGGGTTTA
575 GCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* ** * *
16432670 GGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTATGGCCTGTAAATTCAAACAATGGTCC
640 GGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * **
16432735 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
705 CTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
* * * * *
16432800 CTTTTTGCGGTTC-AGGATTTTTTAATATTCTTTCGGAAGGAG-TTTGGGCCCAAACTTGGTAGA
770 CTTTTTACAGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
16432863 CATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACCTCGAAGTGTACAA
834 CGTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
16432926 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* * * *
16432991 CTGTAAAATCTCAAATGCTTTTTAAGGG-GCGTGAGTTCCCGATGTTTGATGAGGGATAGGGGGC
65 CTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGC
* * ***
16433055 CAATATAAGGGCCAAGTACCCA-TACCCAT-GACACATCATGTGCGCATACCCCCTTGGCCCCCT
129 CAATATAAGGGCCAAGTA-CCAGCACCCATCG-CACATCATGTGCACA-ACCCCCCCAGCCCCC-
* ** * * *
16433118 CGATCGCCGGAACCCCAATGCCAACGGTCAGGTTCTCCAGTGATGCTCCGACGATGGTGCTCCGA
190 CGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCT-C-GAGATGCTCCGGCGATGGTGCCCCGA
* * * * *
16433183 CGAAGAAAAATACAGCACCAGCACATGCCCGAGCCTAGCATGTGCTGTCGCAACCCTCGGTCCAG
253 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGG
* * *
16433248 TCCGATCTTAGACTGGCAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGT
317 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
16433313 CAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGACCAGAGGGGCGGGA--TGC--G-C----A-
382 CAACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGAT
* * * ** * ** * * * * *
16433368 A-GCCGGGTCCCCTTCTGCGTGCTACCGTTCCTATTGTCACAACCCTCAGTCCGGTC-CGATCTT
447 AGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAG-TCTT
* * * * * * *
16433431 AGACTGGGTATGAACCCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGGACGGGCGG
511 AGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGC-G
* * * * * *
16433496 GCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGAGTTGTAGGTGTGTTTA
575 GCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
**
16433561 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
640 GGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * * * * *
16433626 CCTAAGCCTTCACGTAAAGTTACATGGCAAGACGAGTCATTTTCTATTTTTCATGATTTTCGAAA
705 CTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
* * * * **
16433691 CCTTTTGCGGTTCGGGATTTTTTAAAATTTTTGT-GGAAGGAGTTTTCACCCCAAACTTGGTAGA
770 CTTTTTACAGTTCGAGATTTTTTAAAATTTTT-TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * * *
16433755 CATGATCCATGCATTTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAA
834 CGTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
16433817 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
1 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAAC
* * * * *
16433882 CTATAAAATGTCAAATGCTCTTTAAGGGGGGTATGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
65 CTGTAAAATCTCAAATGCTCTTTAA-GGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGG
* * * * * * *
16433947 CCAGTATAAGGACCAAGTACCAGCACGCATCGCACGTCAGGTGCGCACACCCCCCTCGGCCCCCC
128 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACA-ACCCCCC-CAG-CCCCC
* * * * * *
16434012 CAATCACC-AGAACCCCAATGTCGTCGGTCAGGTTCTCCGCCGATGCTCCAGCGACGGTGCCCCG
190 CGATCGCCGA-AACCCCAATGCCGTCGGTCAGGTTCT-CG-AGATGCTCCGGCGATGGTGCCCCG
* * * *
16434076 GCAAAGAAAAATGTGGCACTAGCACATGCCCGAGCCCAGCATGTGCT
252 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
16434123 ACCACAACTC
Statistics
Matches: 9504, Mismatches: 1670, Indels: 1382
0.76 0.13 0.11
Matches are distributed among these distances:
822 8 0.00
823 15 0.00
824 22 0.00
825 1 0.00
826 5 0.00
827 2 0.00
828 7 0.00
829 25 0.00
830 29 0.00
831 6 0.00
832 3 0.00
833 5 0.00
834 11 0.00
835 2 0.00
836 1 0.00
837 3 0.00
838 1 0.00
839 8 0.00
840 5 0.00
841 33 0.00
842 170 0.02
843 121 0.01
844 70 0.01
845 215 0.02
846 195 0.02
847 199 0.02
848 11 0.00
849 23 0.00
850 27 0.00
851 231 0.02
852 83 0.01
853 10 0.00
854 12 0.00
855 168 0.02
856 11 0.00
857 8 0.00
858 22 0.00
859 117 0.01
860 6 0.00
861 18 0.00
862 25 0.00
863 18 0.00
864 5 0.00
865 301 0.03
866 91 0.01
867 174 0.02
868 45 0.00
869 91 0.01
870 177 0.02
871 233 0.02
872 13 0.00
873 13 0.00
874 20 0.00
875 45 0.00
876 22 0.00
877 38 0.00
878 31 0.00
879 71 0.01
880 4 0.00
881 8 0.00
882 13 0.00
883 7 0.00
884 8 0.00
885 103 0.01
886 9 0.00
887 21 0.00
888 7 0.00
889 9 0.00
890 24 0.00
891 471 0.05
892 199 0.02
893 113 0.01
894 124 0.01
895 38 0.00
896 25 0.00
897 34 0.00
898 39 0.00
899 75 0.01
900 49 0.01
901 364 0.04
902 1374 0.14
903 842 0.09
904 898 0.09
905 110 0.01
906 14 0.00
907 222 0.02
908 29 0.00
909 255 0.03
910 70 0.01
911 97 0.01
912 5 0.00
914 1 0.00
915 3 0.00
916 15 0.00
917 3 0.00
918 2 0.00
920 2 0.00
921 7 0.00
922 3 0.00
923 3 0.00
924 14 0.00
925 3 0.00
926 2 0.00
927 1 0.00
929 3 0.00
930 1 0.00
931 2 0.00
932 1 0.00
933 5 0.00
935 4 0.00
936 3 0.00
937 4 0.00
938 1 0.00
939 3 0.00
940 1 0.00
941 7 0.00
942 3 0.00
943 4 0.00
944 6 0.00
946 2 0.00
947 8 0.00
949 2 0.00
950 3 0.00
952 1 0.00
953 3 0.00
954 8 0.00
955 5 0.00
956 8 0.00
957 2 0.00
958 2 0.00
959 3 0.00
960 1 0.00
963 4 0.00
964 21 0.00
965 47 0.00
966 100 0.01
967 14 0.00
968 19 0.00
969 31 0.00
970 21 0.00
971 6 0.00
972 27 0.00
973 40 0.00
974 14 0.00
975 11 0.00
976 12 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (896 bp):
GATTTTGTGACCATTTGAAAAAAGTGTCCCATTTCAGAAACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAACCCCCCCAGCCCCCCGATCG
CCGAAACCCCAATGCCGTCGGTCAGGTTCTCGAGATGCTCCGGCGATGGTGCCCCGACGAAGAAA
AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTT
AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATG
AAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATAGGTCGGGT
CCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGATCTAGTCTTAGATTGGGAA
TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGCGCGGCACTACGTCG
GCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
ATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
ACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGT
TCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
ATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
Found at i:16424338 original size:26 final size:26
Alignment explanation
Indices: 16424302--16424354 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16424292 CCGGTCTGAT
* *
16424302 CTTAGACTGGGAATGAGCTTCGTATG
1 CTTAGACTGGGAATGAACTGCGTATG
16424328 CTTAGACTGGGAATGAACTGCGTATG
1 CTTAGACTGGGAATGAACTGCGTATG
16424354 C
1 C
16424355 CTAAGTCGAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.17, G:0.30, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTGCGTATG
Found at i:16424548 original size:8 final size:8
Alignment explanation
Indices: 16424535--16424563 Score: 58
Period size: 8 Copynumber: 3.6 Consensus size: 8
16424525 GACGAAACGA
16424535 GCGGGCAG
1 GCGGGCAG
16424543 GCGGGCAG
1 GCGGGCAG
16424551 GCGGGCAG
1 GCGGGCAG
16424559 GCGGG
1 GCGGG
16424564 TACTACGTCG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
8 21 1.00
ACGTcount: A:0.10, C:0.24, G:0.66, T:0.00
Consensus pattern (8 bp):
GCGGGCAG
Found at i:16425239 original size:26 final size:26
Alignment explanation
Indices: 16425203--16425252 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
16425193 TCCAGTCGTT
16425203 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16425229 CTTAGACTGGGAATGAACTGCGTA
1 CTTAGACTGGGAATGAACTCCGTA
16425253 CGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.18, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16429471 original size:26 final size:26
Alignment explanation
Indices: 16429442--16429494 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16429432 CTGGTCCGAT
16429442 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16429468 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16429494 C
1 C
16429495 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16429739 original size:25 final size:25
Alignment explanation
Indices: 16429705--16429752 Score: 78
Period size: 25 Copynumber: 1.9 Consensus size: 25
16429695 TCCGATCCTA
* *
16429705 GACTGGGAATGAACTTCGTATGCTT
1 GACTAGGAATGAACTCCGTATGCTT
16429730 GACTAGGAATGAACTCCGTATGC
1 GACTAGGAATGAACTCCGTATGC
16429753 CTAAGTCAAC
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
25 21 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (25 bp):
GACTAGGAATGAACTCCGTATGCTT
Found at i:16431477 original size:26 final size:26
Alignment explanation
Indices: 16431448--16431500 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16431438 CCGGTCCGAT
*
16431448 CTTAGATTAGGAATAAACTCCGTATG
1 CTTAGACTAGGAATAAACTCCGTATG
* *
16431474 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATAAACTCCGTATG
16431500 C
1 C
16431501 CTAAGCCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATAAACTCCGTATG
Found at i:16431945 original size:903 final size:903
Alignment explanation
Indices: 16430137--16434122 Score: 5964
Period size: 903 Copynumber: 4.4 Consensus size: 903
16430127 GAGTTTTCAC
* *
16430137 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATTCAGCCAAAAA
1 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAC
16430202 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
65 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
16430267 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAT
130 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAT
*
16430332 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCTCACAACC
195 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAA-C
* * *
16430397 CCCCCAG-CCCCCCGATCGCCGGAACCCTAATGTCGTCGGTCAGGTTCTCCGAG-GATGCTCTGG
259 CCCCCGGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCCG-GCGATGCTCTGG
* * * *
16430460 CGATTGTGCCCCGACGAAGAAAAATTCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
323 CGATGGTGCCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * *
16430525 AACCCTCAGCCCGGTCCGATCTTAGACTAGGAATAAACTTCGGATGCTTAGACTGGGAATGAACT
388 AACCCTCGGCCCGGTCCGATCTTAGACTAGGAATAAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * * * * *
16430590 CTGTATGCCTATGTCAACCCACGAAATGGGCATGCGAGCGCTCAACTGGCAAGAGGGGCGGGATG
453 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * *
16430655 CGCAAGCCAGGGATCGGCCGGGTCTCCCTCTACGTGCTGTCGATCCTGCTGTCACAACCCTCGGT
518 CGCAAGCCAGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTACTGCCACAACCCTCGGT
* * * *
16430720 CTGGTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTGCTGAAACGAGCAGGTG
583 CCGGTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTGATGAAACGAGCGGGCG
*
16430785 AGCGGGCGGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCATGCCGTGGATCGATAGGGT
648 AGCGGGC-GGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGT
* *
16430850 GGTGGGTGGGTTTAGGCACATCCTCATATTTCTGCGTGCCAATGACATTTTTATGGCTTGTAAAT
712 GGTGGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAAT
*
16430915 TCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
777 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * * *
16430980 CACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTGAATATTTTTTCGAAAGGAG-TTTGG
842 CATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAATATTTTTTCGGAAGGAGTTTTGG
* *
16431041 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTCGCATGCAAAAAAAAATTCAGCTAAAACC
1 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACC
* * * *
16431106 TCTAAGTGTACAAGATTTTGTGACCATTTGAAAAACGTGTCGCCATTTCAGACACGTTAATGGCT
66 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
16431171 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
131 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
16431236 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACCC
196 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACCC
*** *
16431301 CCCGGCCCCCCCGATCAATGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCTGGCGA
261 CCCGGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCTGGCGA
*
16431366 TGGTGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
326 TGGTGCCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
*
16431431 CCTCGGCCCGGTCCGATCTTAGATTAGGAATAAACTCCGTATGCTTAGACTGGGAATGAACTCCG
391 CCTCGGCCCGGTCCGATCTTAGACTAGGAATAAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
16431496 TATGCCTAAGCCAACCCACGAAACGAGCGTGCGGGTGTTCAGCCGGCCAGAGGGGCGGGATGCGC
456 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
** * *
16431561 AAGCCAGGGATCGGCCGGGTCCCCCTCTATTTGCTATCGATCCTGCTGCCACAACCCTCGGTCTG
521 AAGCCAGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTACTGCCACAACCCTCGGTCCG
*
16431626 GTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTGATGAAACAAGCGGGCGAGC
586 GTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTGATGAAACGAGCGGGCGAGC
* *
16431691 GGGCGGGCGGGCACCACGTCGGCCAGAGAGACGGGATCCGCAAGCCGCGGATCGATAGGGTGGTG
651 GGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGTGGTG
* *
16431756 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGTCATTTTTATGGCTTGTAAATTCAT
716 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
16431821 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
781 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* **
16431886 ACTTTTGAAACTTTTTGTAGTTCGGGATTTTTTAATATTTTTTCGGAAGGAGTTTTGG
846 ATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAATATTTTTTCGGAAGGAGTTTTGG
* *
16431944 CCCAAACCTGGTCGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACC
1 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACC
* * *
16432009 TCTAAGTGTACAAGATTTTGTGACCATCTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCT
66 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
16432074 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
131 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
*
16432139 AGGGATAGGGGGCC-ATGATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGTGCACAACC
196 AGGGATAGGGGGCCAAT-ATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACC
* **
16432203 CCCCTGGCCCCCCCGATCGCCGGAACCCTATTGCCGCCGGTCAGGTTCTCCAACGATGCTCTGGC
260 CCCC-GGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCTGGC
* * * * *
16432268 GATGGTGCCCCGGTGAAGAAAAATATGACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGTA
324 GATGGTGCCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * *
16432333 ACCCTCGGCCCGGTCCGATCTTAGACTGGGAATAAACTCTGTATGCTTAGATTGGGAATGAACTT
389 ACCCTCGGCCCGGTCCGATCTTAGACTAGGAATAAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * *
16432398 CGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCTGCAGGCCAGAGGGGCGGGATGC
454 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * * * * *
16432463 GCAAGCCAGGGATCGGTCGGTTCCCCTTCTACCTGCTGTTGATCCTACTACCACAACCCTCGGTC
519 GCAAGCCAGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTACTGCCACAACCCTCGGTC
*
16432528 CGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACTGATGAAACGAGCGGGCGA
584 CGGTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTGATGAAACGAGCGGGCGA
16432593 GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGTGG
649 GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGTGG
* *
16432658 TGGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTATGGCCTGTAAATTC
714 TGGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTC
*
16432723 AAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
779 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * *
16432788 TGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAATATTCTTTCGGAAGGAGTTTGGG
844 TGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAATATTTTTTCGGAAGGAGTTTTGG
16432848 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACC
1 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACC
*
16432913 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCT
66 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * * * *
16432978 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAA-GGGGCGTGAGTTCCCGATGTTTGATG
131 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
* * *
16433042 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCCA-TACCCAT-GACACATCATGTGCGCA-TAC
196 AGGGATAGGGGGCCAATATAAGGGCCAAGTA-CCAGCACCCATCG-TACATCATGTGCGCACAAC
* * * ** * * * *
16433104 CCCCTTGGCCCCCTCGATCGCCGGAACCCCAATGCCAACGGTCAGGTTCTCCAGTGATGCTCCGA
259 CCCC-CGGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCTGG
* * * * *
16433169 CGATGGTGCTCCGACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCTAGCATGTGCTGTCGC
323 CGATGGTGCCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * *
16433234 AACCCTCGGTCCAGTCCGATCTTAGACT-GGCAATGAACTTCGTATGCTTAGACTGGGAATGAAC
388 AACCCTCGGCCCGGTCCGATCTTAGACTAGG-AATAAACTCCGTATGCTTAGACTGGGAATGAAC
* *
16433298 TCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGACCAGAGGGGCGGGAT
452 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * *
16433363 --GC--G-CA---A---GCCGGGTCCCCTTCTGCGTGCTACCGTTCCTATTGTCACAACCCTCAG
517 GCGCAAGCCAGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTACTGCCACAACCCTCGG
* * * * * * *
16433417 TCCGGTCCGATCTTAGACTGGGTATGAACCCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGC
582 TCCGGTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTGATGAAACGAGCGGGC
* * * * * *
16433482 GGGCGGACGGGCGGGCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGAGT
647 GAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGT
* * *
16433547 TGTAGGTGTGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAAT
712 GGTGGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAAT
* * * * *
16433612 TCATACAATGGTCCCCTAAGCCTTCACGTAAAGTTACATGGCAAGACGAGTCATTTTCTATTTTT
777 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * * **
16433677 CATGATTTTCGAAACCTTTTGCGGTTCGGGATTTTTTAAAATTTTTGT-GGAAGGAGTTTTCAC
842 CATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAATATTTTT-TCGGAAGGAGTTTT-GG
* * *
16433740 CCCAAACTTGGTAGACATGATCCATGCATTTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAAC
1 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACC
*
16433804 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
66 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
16433869 ACTGGCAGCAAACCTATAAAATGTCAAATGCTCTTTAAGGGGGGTATGAGTTCTCAAGGTTTGAT
131 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCAAGGTTTGAT
* * * * * * *
16433934 GAGGGATAGGGGGCCAGTATAAGGACCAAGTACCAGCACGCATCGCACGTCAGGTGCGCACACCC
195 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACC
* * * * * * * **
16433999 CCCTCGGCCCCCCCAATCACCAGAACCCCAATGTCGTCGGTCAGGTTCTCCGCCGATGCTCCAGC
260 CCC-CGGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCTGGC
* * ** *
16434064 GACGGTGCCCCGGCAAAGAAAAATGTGGCACTAGCACATGCCCGAGCCCAGCATGTGCT
324 GATGGTGCCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
16434123 ACCACAACTC
Statistics
Matches: 2813, Mismatches: 252, Indels: 44
0.90 0.08 0.01
Matches are distributed among these distances:
891 453 0.16
892 35 0.01
893 68 0.02
894 106 0.04
897 2 0.00
898 1 0.00
900 2 0.00
901 2 0.00
902 463 0.16
903 880 0.31
904 801 0.28
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (903 bp):
CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACC
TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACCC
CCCGGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCTGGCGA
TGGTGCCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
CCTCGGCCCGGTCCGATCTTAGACTAGGAATAAACTCCGTATGCTTAGACTGGGAATGAACTCCG
TATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
AAGCCAGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTACTGCCACAACCCTCGGTCCG
GTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACTGATGAAACGAGCGGGCGAGC
GGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGTGGTG
GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
ATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAATATTTTTTCGGAAGGAGTTTTGG
Found at i:16432388 original size:26 final size:26
Alignment explanation
Indices: 16432352--16432404 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
16432342 CCGGTCCGAT
16432352 CTTAGACTGGGAATAAAC-TCTGTATG
1 CTTAGACTGGGAATAAACTTC-GTATG
* *
16432378 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATAAACTTCGTATG
16432404 C
1 C
16432405 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 22 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTTCGTATG
Found at i:16433305 original size:26 final size:26
Alignment explanation
Indices: 16433254--16433306 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16433244 CCAGTCCGAT
* *
16433254 CTTAGACTGGCAATGAACTTCGTATG
1 CTTAGACTGGCAATGAACTCCATATG
*
16433280 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGCAATGAACTCCATATG
16433306 C
1 C
16433307 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCATATG
Found at i:16435735 original size:26 final size:26
Alignment explanation
Indices: 16435706--16435757 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16435696 CGGTTCGATC
16435706 TTAGACTGGGAATGAACTCCGTATGT
1 TTAGACTGGGAATGAACTCCGTATGT
*
16435732 TTAGACTGGGAATGAACTTCGTATGT
1 TTAGACTGGGAATGAACTCCGTATGT
16435758 CTAAGCCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.13, G:0.27, T:0.33
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGT
Found at i:16436134 original size:904 final size:902
Alignment explanation
Indices: 16434128--16442259 Score: 9947
Period size: 904 Copynumber: 9.1 Consensus size: 902
16434118 GTGCTACCAC
* * * *
16434128 AACTCCGTATGCCTAAGCCAACCGACAAAACAAGTGGTTG-GGCAGGCGGGTGGGCACTATGCTG
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG--GCGG-AGGCGGGTGGGCACTACGCTG
* * *
16434192 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGATAGGTGGGTTTGGGCACATCTTG
63 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
16434257 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
128 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * **
16434322 CCGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGT
193 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGT
* * **
16434387 TCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG-AACAACACTTGGTAGACGTGATCCTTG
258 TCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAA-ACTTGGTAGACGTGATCCTTG
* *
16434451 TATTTTTGTTGGCAGGCACAAAAAAAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
322 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * * * *
16434516 TTTG-AAAAAGTGTCCCTATTTCAGATACTTTAATGCCTACTGACAGCAAACCTGTAAATTCTCA
387 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
16434580 AATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCC
452 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* *
16434645 AAGTACCAGCAGCCATCGAACATCATGTGCGCACA-CCCCCTCGG-CCCCCCGATCGTCGGAACC
517 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCT-GGCCCCCCCGATCGTCGGAACC
* ** * * * * *
16434708 CCAATGTCGTCGGTCAGGTTCTCCCCTGATGCTCCTGCGATGGAGCCCTGACAAAGAAAAATACG
581 CCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCG
* * * * *
16434773 ACACCAGCACATGCTCAAGCCCATCATGTGCTGCCGTAACCCT---T---G---G----T---CT
646 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
* *
16434822 --G---G---TCCG-AT-CTTAGACTGAGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACG
711 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * **
16434877 AGCGT-CTGGGTGCTCAGTCGGCCAGA-GGGCGGGATGCGTAAGCCGGGGATCGGTCGGGTCCCC
776 AGCGTGC-GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCC
* * * * *
16434940 CTCTGCATGCTG-CTGATCCTGCTGCAGCAACCCTCGATCTGGTCTGATCTTAGACT-GGAATG
840 CTCTGCGTGCTGTC-GATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* * * *
16435002 AACTTCGTATGCCTAAGCCAA-CGACGAAACAAGCGGGCAGGCGGGCGGGTGGGCACTACGCCGG
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GG-AGGCGGGTGGGCACTACGCTGG
* * * **
16435066 CCAGAGAGACGAGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGAGTTTACTCACATCTTCA
64 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
*
16435131 TATTTCTGCATGCCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
129 TATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
**
16435196 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTT
194 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT
* * * *
16435261 CGGGATTTTTCAAAATTTTTTTGGAAGGATTTTTGGACCCAAACTTGGTAGACATGATCCTTGTA
259 CGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* * *
16435326 TTTTTGTTGGCATGCTCAAAAAAATTCAGCTAAAAAGTTGAAGTGTACAAGATTTTGTGACCATT
324 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
*
16435391 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGACTACTGGCAGCAAACCTGTAAAATCTCAAA
389 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* * * *
16435456 TGCTCTTTAAGGAGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGACCAGTATAAGGGCCAA
454 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* *
16435521 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACTCCA
519 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGTCGGAACCCCA
* * * * **
16435586 ATGCTGTCGGTCAGGTTCTCCGGTGATGTTCTGGCGATGGTGCCCCGGCGAAGAAAAATATGGCA
584 ATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCA
* * * * *
16435651 CCAGCACATGCCCGAGCCCAGCATGTCCTACTGCAACCCTCGATCCGGTTCGATCTTAGACTGGG
649 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG
* * * * * *
16435716 AATGAACTCCGTATGTTTAGACTGGGAATGAACTTCGTATGTCTAAGCCAACCAATGAAACGAGC
714 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * ** *
16435781 ATGCAGGTGC-CAAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCATC
779 GTGCGGGCGCTC-AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTC
* * * * * **
16435845 TGCATGCTGCCAATCCTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGACTATGAATG
843 TGCGTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* * * *
16435905 AACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGAAGGCGGGTAGGCACCACTCTGG
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GG-AGGCGGGTGGGCACTACGCTGG
* *
16435970 CCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGTGTGGTAGGTGGGTTTAGGCACATCTTCA
64 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
** * ** * *
16436035 TATTTCTGTGTGCCTATGGTATTTTTATGGCTTGTAAATTGATACAATGGTCACTTAAGCCTTCA
129 TATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * *
16436100 CGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTCCATAATTTTTGAAACTTTTTACAGTT
194 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT
* * *
16436165 CGGGATTTTTCAAAATTTTTTTGGAAGGATTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTA
259 CGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
*
16436230 TTTTTGTTGGCATGCTCAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
324 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
*
16436295 TGAAAAAAG-GTCCCCATTTCATGACACTTTAATGGCTACT-GCAGCAAACCGGTAAAATCTTCA
389 TGAAAAAAGTGTCCCCATTTCA-GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC-TC-
*
16436358 AAATGCTCTTTAAGGGGGTGTGAGTTCTCCGAGGTTTGATGAGGGAATAGAGGGCCAATATAAGG
451 AAATGCTCTTTAAGGGGGTGTGAGTTCT-CGAGGTTTGATGAGGG-ATAGGGGGCCAATATAAGG
* **
16436423 GCCAAGTACCAGCTACCCAATCGCACATCATGTGTGCACACCTCCCC-CACCCCCCCGATCGTTC
514 GCCAAGTACCAGC-ACCC-ATCGCACATCATGTGCGCACACC-CCCCTGGCCCCCCCGATCG-TC
* * * ** *
16436487 GGAAACCCCAATGCCGCCGGTCCAAGTTCTCTGACGATTGC-CCGGACGATGGTGCCTCGACGAA
575 GG-AACCCCAATGCCGTCGGT-CAGGTTCTCCGGTGA-TGCTCCGG-CGATGGTGCCCCGACGAA
* * * ** * *
16436551 GAAAAATGCGGCACCTGTACATGCTCGAGCCCAGCATGTGCTGTTGCAACCTTCGGTCCGGTCTG
636 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
*
16436616 ATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
701 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * *
16436681 CCAAGAAACGAGTGTGCGGGCGCTCAACTGGCCAGAGGGGCGGGATGTGCAAGCTGGGGATTGAC
766 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * * * *
16436746 CCGG-CCCTCCTCTACTTGCTGCCGATCCTGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGAC
831 CGGGTCCC-CCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGAC
*
16436810 TAGGAATG
895 TGGGAATG
* * *
16436818 AACTCCGTATGCCTAAGCCGACCGATGAAACGAGC-GGCGGGACGGGCGGGTGGGCACTACGCCG
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GGA--GGCGGGTGGGCACTACGCTG
* * * *
16436882 GCTAGAGAGACAGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTCGGCACATCTTC
63 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
16436947 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
128 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * *
16437012 ACGTGAGGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATTATTTTTAAAACTTTTTACGGT
193 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGT
* * *
16437077 TCGGGATTTTTTAAAATTTCTTTCGAAGGAGTTTAT-GCCCCAAACTTGGTAGACATGATCCTTG
258 TCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTT-TGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * *
16437141 TATTTTT-TTGGCAAGCACAAAAAAATTCAGCTAAAAACCCGAAGTGTAGAAGATTTTGCGACCA
322 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
16437205 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAATCTGTAAAATCTCA
387 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
16437270 AATGCTGTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCC
452 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
16437335 AAGT----------A-C-CACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC-TCCGGAACC
517 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGT-CGGAACC
** * *
16437387 CCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAATAATGCG
581 CCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCG
* ** *
16437452 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCAGCCCCGATCTTAGGC
646 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-GGTCCGATCTTAGAC
* * * *
16437517 TTGGAATGAACT-CGATATGCGTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAA
710 TGGGAATGAACTCCG-TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * *
16437581 CGAGCGTGTGGGCGCTCAGCTGGCCAGAGGGACGGGGTGCACAAGCCGGGGATCGATCGGGT-CC
774 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCC
* * * * * *
16437645 CCTGCTACGTGCTGTCGATCCTGCTACAGTAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATG
839 CCT-CTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* * * *
16437710 AATTTCGTATGCCTAAGGCAACCGACGAAACGA----GC-G-GGC---T-GGCATTACGCTGGCC
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGAGGCGGGTGGGCACTACGCTGGCC
* * * *
16437765 AGAGAGACAGGATGTGCAAGCCGTAGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATA
66 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
** * *
16437830 TTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAACTCATACAATGGTCCTTTAAGCCTTCACG
131 TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
* *
16437895 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCG
196 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG
* * *
16437960 GGATTTTTTAAAATTTCTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATT
261 GGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * * * *
16438025 TTTTTTGGCATGCAAAAAAAAATTCAGCTAGAAAC-CGAAAGTCTACAATATTTTGTGACCATTT
326 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTT
*
16438089 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAAT
390 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
*
16438154 GCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
455 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * *
16438219 TACCAGC-CCTCATCGCACATCTTGTGCGCATACCACCCCCGGCCCCCCCGATCATCGGAACCCC
520 TACCAGCACC-CATCGCACATCATGTGCGCACACC-CCCCTGGCCCCCCCGATCGTCGGAACCCC
* ** * ** *
16438283 AATGCCGTCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGAC
583 AATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGC
* * *
16438348 ACCAGCACATGCCCGAGCCCAACATGTGCTGCCGCAACCCTTGGTCTGGTCCGATCTTAGACTGG
648 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
* * * * * * *
16438413 GAATGAACTCTGTATGCTTAGATTGGGAGTGAACTCCGTATGGCAAAGTGAACCCACGGAACGAG
713 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * *
16438478 CGTGCGGGCTCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGGGTCCCCCGT
778 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCC-T
* * * * * ***
16438543 -TGCGTGCTGTCGATCTTGCTACCGTAACCTTAGGTCCGGTCCGATCTTAGACTTTCAATG
842 CTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* * * *
16438603 AATTCCGTATGCCTAAGCGAACCAACGAAACGA----GC--AGGC---T-GGCACTACGCTGGCG
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGAGGCGGGTGGGCACTACGCTGGCC
* * * * *
16438658 AGAGAGATGGGATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGGACATCTTCACA
66 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
*
16438723 TTTCTGCATGCCCATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
131 TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
** * * *
16438788 TGAAGTTTCATGGCAAGAAAACTCATTTTCTGTTTTTCATGATTTTTGAAACTTTTTACAGTTCG
196 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG
* * * * *
16438853 GGATTTTTTAAAATTTCTTCGGAAGGAGTTTTGGTCCCAACCTTGGTAGACGAGATCCTTGTATT
261 GGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * *
16438918 TCTGTTGGAAAGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
326 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
16438983 AAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
391 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * ** *
16439048 CTTTTTAA-GGGGTGTGAGTTCTTGCTGTTTGATGAGGGATA-GGGGCCAATATGAGGGCCAAGT
456 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* ** *
16439111 ACCAGCACCCATCGCACATTATGTGCGCACACCCCCCTGGGCCCCCCCGATCACCTGAACCCCAA
521 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCT-GGCCCCCCCGATCGTCGGAACCCCAA
* * * *
16439176 TGCCGTCGGTCA--------AGT--T-CTCCGGCGATGGTGCGCCGACGAACAAAAATGTGGCAC
585 TGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * *
16439230 CAGCATATGCCCGAGCCCAGCATGTGCTACCACAA-CC-C--T-CAGTCCGATC-----C-----
650 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGA
* * *
16439280 ----A------AT-CTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGGAACAAGCG
715 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * ** * *
16439334 TGTGGGTGCTCAGCCGACCAGAGCGACGGGATGCGCAAATCGAGGATCGACCGGGTCCCCCTCTA
780 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTG
* * * ** * *
16439399 CGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCCTATTCGATCTTAGGCTGGGAATG
845 CGTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* * * * **
16439457 CACTCCGTATGCCTAAGCCAACTGATGAAATGAGCGGGCGGGCAGGCGGGCAGGCACTACG-TCG
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GG-AGGCGGGTGGGCACTACGCT-G
*
16439521 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTC
63 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
** *
16439586 ATATTTCTGTGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
128 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
*
16439651 ACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGT
193 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGT
* * *
16439716 TCGAGATTTTTTAAAATTTTTTTGGAAGGAGTCTTGGCCCCAAACTTGGTAGATGTGATCCTTGT
258 TCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * *
16439781 ATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCAAACTGTACAAGATTTTGTGACCAT
323 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
* * * *
16439846 TTGAAAAAAATGTCCCCATTTCGGACACTTTAATGGCTACGGGCAGCAAACCTATAAAATCTCAA
388 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
* *
16439911 ATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCA
453 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * * *
16439976 AGTACCAGCACCCATCGTACATCATCTG-TCACACCCCCC-GGCCCCCCCGATCGTCGGAACACC
518 AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGTCGGAACCCC
* * * ***
16440039 AATGCCG-CTGGTCAGGTTCTCCGGTGATGCTCTGGCGATGGTGCCTCGACAAAGAAAAATATAG
583 AATGCCGTC-GGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGG
* ** *
16440103 CACTAGCACATGCCCGAGCCCAGCATGTGCTATCGTAACCCTCGGTCCGGTCCGATCTTAGACTG
647 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* * *
16440168 GGAGTGAA---C---T-C-T--A-T----ATG----CC-TA-----AA-TCGACCCACAAAACGA
712 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * *
16440207 GCGTGCAGGCGCTCAGCTGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCT
777 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCT
* * * * * *
16440272 TTGTGTGCTGTCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATG
842 CTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* *
16440333 AACTCTGTATGCCTAAGCCAACCGACGAAACGA----GC-G-GGCGGGTGGGCACTATG-TCGGC
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGAGGCGGGTGGGCACTACGCT-GGC
*
16440391 CAGAGAGACGGGATGCGCAAGCCGTGGAACGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
65 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
*
16440456 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
130 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * * * * *
16440521 GTGAAGTTTCTTGGAAAGACGACCCGTTTTTTATTTTTCGTGATTTTTAAAACTTTTTGCGGTTC
195 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC
* * * * * **
16440586 AGGA-TTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAGATA-TT-GTAGACAT-CTCAAATG
260 GGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCA-A-ACTTGGTAGACGTGATC-CTTG
****** * * * * *
16440647 CTA-AAAAACT--CTTGCACAAAAAAATTCATCTAAAACCTCAAAGTGTACAAGATTTTGGGACC
322 -TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
*
16440709 ATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
386 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * * *
16440774 AATTGCTTTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGAGAGGGGGCCAATATAAGGGC
451 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * ** *
16440839 CAAGTACCAGCACCCGTCACACATCATTTGCGCATGCCCCCC-GGCCCCCCCGATCGTGGGAACC
516 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGTCGGAACC
** * ** * *
16440903 CCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGAAGATGGTGCCTCGGTGAAGAGAAATGTG
581 CCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCG
* * * * *
16440968 GTACTAGCACTTGCCCGAGCCCAGCATGTGCTGCCACAACCCGCGGTCCGGTCCGATCTTAGACT
646 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
* *
16441033 TGGAATGAACTCCGTATGCTTAGACTGGGAATTAACTCCGTATGCCTAAGTCAACCCACGAAACG
711 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * * *
16441098 AGCGTACAGGTGCTCAGCCGACCAGAGGGGCGGGATGCGTAAGCTGAGGATC-AGCCGGGTGCCC
776 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCC
* * * * * * * *
16441162 CTCTGCATACTGTCGATCCTGCAATCGCAACCCTTGATTCGGTCAGATCATAGACTGGGAATG
840 CTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* * * *
16441225 AACTCC-TATGCCTAAGCAAACTGACGAAATGAGCGGGCGGACGGGCGGGCT-GGCACTACGCCG
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGA--GGCGGG-TGGGCACTACGCTG
* *
16441288 ACCAGAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
63 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* **
16441353 ATATTT-TACATTACAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
128 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * **
16441417 ACGTGAAGTTTCA-GGAGAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACATTTTGTGG
193 ACGTGAAGTTTCATGG-CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG
* *
16441481 TTCAGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTG
257 TTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * **
16441546 TATTTTTGTAGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGCCACCA
322 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
16441611 TTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
387 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
16441676 AATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
452 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * *
16441741 AAGTACCAGCACCCATCGCATATCATGCGCGCACAACCCCCTCTCGG-TCCCCCGATCGCCGAAA
517 AAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCC-CT-GGCCCCCCCGATCGTCGGAA
* * * ** *
16441805 CCCCAATGCCGTCGGTTAGGTTCTCTGGTGATGCTCCGGCGATGGTGCACCGGGGAAGAAAAATA
579 CCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG
* * * *
16441870 CAGCACCAGAACATGCACGAGCCCAGCATGTGCTGCCCCAACCCTCGGTCCGGTCCGATCTTAGA
644 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
* *
16441935 CTAGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
709 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * * *
16442000 TGAGCGTACGGGCGCTCAGCTGGCCAGAGAGGCGGGATGCGTAAGTCGGGGATCGGCCGGGTCCC
774 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCC
* * * * * *
16442065 CCTCTACGTGCTG-CTGATCCTGCTACCACAATCGTTGATCTGGTCCGATCTTAGACTGGGAATG
839 CCTCTGCGTGCTGTC-GATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
* * ** * * ***
16442129 AACTCCGTATTCCTAAGCCAATCGACGAAACGAGCGTAC-G-GGCGGGCGGGCACTACGCCGATT
1 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGAGGCGGGTGGGCACTACGCTGGCC
* *
16442192 AGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATA
66 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
16442257 TTT
131 TTT
16442260 TTGCGTTGTC
Statistics
Matches: 6294, Mismatches: 768, Indels: 365
0.85 0.10 0.05
Matches are distributed among these distances:
853 1 0.00
854 170 0.03
855 2 0.00
858 2 0.00
861 1 0.00
862 4 0.00
864 1 0.00
865 224 0.04
866 524 0.08
867 80 0.01
868 252 0.04
869 2 0.00
870 2 0.00
871 1 0.00
872 3 0.00
873 333 0.05
874 173 0.03
875 120 0.02
876 205 0.03
877 5 0.00
878 2 0.00
879 3 0.00
880 321 0.05
881 190 0.03
882 2 0.00
883 2 0.00
884 4 0.00
885 2 0.00
886 3 0.00
887 4 0.00
888 1 0.00
889 2 0.00
890 4 0.00
891 192 0.03
892 371 0.06
893 612 0.10
894 145 0.02
895 36 0.01
896 3 0.00
897 4 0.00
898 119 0.02
899 128 0.02
900 6 0.00
901 339 0.05
902 87 0.01
903 58 0.01
904 660 0.10
905 54 0.01
906 15 0.00
907 29 0.00
908 4 0.00
909 58 0.01
910 23 0.00
911 43 0.01
912 106 0.02
913 555 0.09
914 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (902 bp):
AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGAGGCGGGTGGGCACTACGCTGGCC
AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG
GGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGTCGGAACCCCAAT
GCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACC
AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAA
TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGC
GTGCTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATG
Found at i:16436647 original size:26 final size:26
Alignment explanation
Indices: 16436618--16436670 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16436608 CCGGTCTGAT
16436618 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16436644 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16436670 C
1 C
16436671 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16438432 original size:26 final size:26
Alignment explanation
Indices: 16438403--16438454 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16438393 CTGGTCCGAT
*
16438403 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
16438429 CTTAGATTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16438455 GCAAAGTGAA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.15, G:0.29, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16441054 original size:26 final size:26
Alignment explanation
Indices: 16441025--16441077 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16441015 CCGGTCCGAT
*
16441025 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16441051 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16441077 C
1 C
16441078 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16441958 original size:26 final size:26
Alignment explanation
Indices: 16441929--16441981 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16441919 CCGGTCCGAT
16441929 CTTAGACTAGG-AATGAACTCCGTATG
1 CTTAGACT-GGCAATGAACTCCGTATG
16441955 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
16441981 C
1 C
16441982 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 2 0.08
26 24 0.92
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:16442508 original size:26 final size:25
Alignment explanation
Indices: 16442475--16442553 Score: 95
Period size: 26 Copynumber: 3.0 Consensus size: 25
16442465 CTGGTCTAAT
*
16442475 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACT-GGAATGAACTCCGTATG
* *
16442501 CTTCGACTGGGAATGAACTCCATATG
1 CTTAGACT-GGAATGAACTCCGTATG
*
16442527 CTTAGACTGCGAAAGAACTCCGTATG
1 CTTAGACTG-GAATGAACTCCGTATG
16442553 C
1 C
16442554 CTAAGTCAAC
Statistics
Matches: 45, Mismatches: 7, Indels: 2
0.83 0.13 0.04
Matches are distributed among these distances:
25 1 0.02
26 44 0.98
ACGTcount: A:0.29, C:0.22, G:0.23, T:0.27
Consensus pattern (25 bp):
CTTAGACTGGAATGAACTCCGTATG
Found at i:16443427 original size:26 final size:25
Alignment explanation
Indices: 16443398--16443476 Score: 104
Period size: 26 Copynumber: 3.0 Consensus size: 25
16443388 CTGGTCTGGT
*
16443398 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACT-GGAATGAACTCCGTATG
*
16443424 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACT-GGAATGAACTCCGTATG
*
16443450 CTTAGACTGCGAAAGAACTCCGTATG
1 CTTAGACTG-GAATGAACTCCGTATG
16443476 C
1 C
16443477 CTAAGTCAAC
Statistics
Matches: 47, Mismatches: 5, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
25 1 0.02
26 46 0.98
ACGTcount: A:0.30, C:0.20, G:0.23, T:0.27
Consensus pattern (25 bp):
CTTAGACTGGAATGAACTCCGTATG
Found at i:16444024 original size:902 final size:900
Alignment explanation
Indices: 16442264--16444134 Score: 3105
Period size: 902 Copynumber: 2.1 Consensus size: 900
16442254 ATATTTTTGC
16442264 GTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
1 GTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
*
16442329 TCATGTGTGCACATGCCCCCTCGATCTCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
66 TCATGTGTGCACATGCCCCCCCGATCTCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* *
16442394 GGTGCCCCGACGAAGAAAAATGTGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACC
131 GGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
*
16442459 CTCGGTCTGGTCTAATCTTAGACTAGGAATGAACTCTGTATGCTTCGACTGGGAATGAACTCCAT
196 CTCGGTCTGGTCTAATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCAT
*
16442524 ATGCTTAGACTGCGAAAGAACTCCGTATGCCTAAGTCAACCTACGAAATGAGCGTGCGGGTGCTC
261 ATGCTTAGACTGCGAAAGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTC
* *
16442589 AGCCGGCCAGAGGGGCAGGATGCGCAAGCTGAGGATCGGTCGGGTCCCCCTCTACGTGCTACCAA
326 AGCCGGCCAGAGGGGCAAGATGCGCAAGCTGAGGATCGGTCGGGTCCCCCTCTACATGCTACCAA
*
16442654 TCTTGCTACCACAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGC
391 TCCTGCTACCACAACCCTCGGTCCGAT-CG----TAGAC-----AT--ACTCTGTATGCCTAAGC
** * *
16442719 CAACTGATGAAACGAACGGGCAGGCGAGCGGGCGGGTACTACGTCGGCCAGAGGGATGGGATGCG
444 CAACTGACAAAACGAACGGGCAGACGAGCGGGCGGGTACTACGTCGGCCAGAGGGACGGGATGCG
* *
16442784 TAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATG
509 TAAACCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
16442849 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
574 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
*
16442914 GACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCTGTTCGAGATTTTTTAAAATTT
639 GACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTT
16442979 TTTTGGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTTGTTGGCATGCACA
704 TTTTGGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTTGTTGGCATGCACA
* * *
16443044 AAAATATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTAT
769 AAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCAT
*
16443109 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
834 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGT
16443174 GA
899 GA
* *
16443176 GTTGTCAAGGTTTGATCAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
1 GTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
16443241 TCATGTGTGCACATGCCCCCCCGATCTCCGAAACCCCAATGCCGCCGGTCAGGTTCTTCGATGAT
66 TCATGTGTGCACATGCCCCCCCGATCTCCGAAACCCCAATGCCGCCGGTCAGG---TTC------
16443306 GGTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTG
122 --TCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTG
**
16443371 CTGCCGCAACCCTCGGTCTGGTCTGGTCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGA
185 CTGCCGCAACCCTCGGTCTGGTCTAATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGA
**
16443436 ATGAACTCCATATGCTTAGACTGCGAAAGAACTCCGTATGCCTAAGTCAACCCATTAAATGAGCG
250 ATGAACTCCATATGCTTAGACTGCGAAAGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCG
*
16443501 TGCGGGTGCTCAGCCGGCCAGAGGGGCAAGATGCGCAAGCTGAGGATCGGTCGGGTCCCGCTCTA
315 TGCGGGTGCTCAGCCGGCCAGAGGGGCAAGATGCGCAAGCTGAGGATCGGTCGGGTCCCCCTCTA
*
16443566 CATGCTACCAATCCTGCTGCCACAACCCTCGGT-C-AT-G-A-AC-T-C-C-GTATGCCTAAGCC
380 CATGCTACCAATCCTGCTACCACAACCCTCGGTCCGATCGTAGACATACTCTGTATGCCTAAGCC
* * *
16443622 AACTGACAAAACGAGCGGGCAGACGGGCGGGTGGGTACTACGTCGGCCAGAGGGACGGGATGCGT
445 AACTGACAAAACGAACGGGCAGACGAGCGGGCGGGTACTACGTCGGCCAGAGGGACGGGATGCGT
* *
16443687 AACCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
510 AAACCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGC
16443752 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
575 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
*
16443817 ATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTT
640 ACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTT
* * *
16443882 TTTGGAAGGTGTTTTGGCCCCAAACTTGGTGGACATGATCCTTTTATTTTTGTTGGCATGCACAA
705 TTTGGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTTGTTGGCATGCACAA
*
16443947 AAAAATTCAACTAAAAACTCGAAGTGTCCAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATT
770 AAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATT
16444012 TC-GAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGT
835 TCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGT
16444076 GA
899 GA
* *
16444078 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCATTATAAGGGCCAAGTACCAGCACCC
1 GTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
16444135 TCGGTCTGAT
Statistics
Matches: 906, Mismatches: 41, Indels: 34
0.92 0.04 0.03
Matches are distributed among these distances:
901 1 0.00
902 499 0.55
903 1 0.00
904 1 0.00
907 1 0.00
912 115 0.13
913 2 0.00
914 1 0.00
915 3 0.00
919 1 0.00
921 2 0.00
922 1 0.00
923 278 0.31
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
GTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
TCATGTGTGCACATGCCCCCCCGATCTCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
GGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
CTCGGTCTGGTCTAATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCAT
ATGCTTAGACTGCGAAAGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTC
AGCCGGCCAGAGGGGCAAGATGCGCAAGCTGAGGATCGGTCGGGTCCCCCTCTACATGCTACCAA
TCCTGCTACCACAACCCTCGGTCCGATCGTAGACATACTCTGTATGCCTAAGCCAACTGACAAAA
CGAACGGGCAGACGAGCGGGCGGGTACTACGTCGGCCAGAGGGACGGGATGCGTAAACCATGGAT
CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGG
CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
TCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTGGAAAGAG
TTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAAC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGTGA
Found at i:16445095 original size:26 final size:26
Alignment explanation
Indices: 16445044--16445096 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
16445034 CTGGTCCGAT
* *
16445044 CTTAGATCGGGAATGAACTTCGTATG
1 CTTAGATCGGGAATGAACTCCATATG
16445070 CTTAGA-CTGGGAATGAACTCCATATG
1 CTTAGATC-GGGAATGAACTCCATATG
16445096 C
1 C
16445097 CTCAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGATCGGGAATGAACTCCATATG
Found at i:16446316 original size:882 final size:868
Alignment explanation
Indices: 16444175--16447283 Score: 4056
Period size: 882 Copynumber: 3.5 Consensus size: 868
16444165 AACTCCATAT
*
16444175 TCTTAGACTGGGAATGAACTCCACATGCCTAAGTCAACCCATGAAACGAGCGTGC-AGGCGCTCT
1 TCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGA-GCGCTC-
* * * *
16444239 A-CC-AGCCAGATGGGTGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATACTACCA
64 AGCCGA-CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCG
* * * *
16444302 ATCCTGCTGCCG-TAACCCTCGGTCCGGTCTGATGTTAGACTGGGAATGAACTCTGTATGCCTAA
128 ATCCTGCTACCGCAAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAA
* * * * *
16444366 GCCAACCGACGAAACGAGCGGGCGGGTGGGC--G-AC-ACGCCTGCCAGAGAGTCGGGATGTGCA
193 GCCAACCGACGAAAAGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
16444427 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCT
258 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
*
16444492 ATATTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
323 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
16444557 CGACCCATTTTCTATTTTTCATGATTTTCGAGACTCTTTGCGGTTCGGGATTTTTTGAAATTTTT
388 CGACCCATTTTCTATTTTTCATGATTTTCGAAACTCTTTACGGTTCGAGATTTTTTGAAATTTTT
16444622 TCGGAAGGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCCTGTATTTTTGTTGGCATGCAAAAA
453 TCGGAAGGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCCTGTATTTTTGTTGGCATGCAAAAA
16444687 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCA
16444752 GACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGT
583 GACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGT
* * * *
16444817 TCTCGAGGTTTGATGAGGGATAGGGGGCCAAGATAAGGGCCAAGGACTAGCACCCATCACACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
16444882 ATGTGCACACACCCCCTCGGCCCCCCCAATCATCGGAAACCCAATGCCGTCGGTCAGGTTCTCCG
713 ATGTGCGCACACCCCC-CGGCCCCCCCGATCGTCGG-AACCCAATGCCGTCGGTCAAGTTCTCC-
* **
16444947 GCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGC
775 GCGATGCTCCGATGAT-GTGCCCCGGTGAAGAAAAATAC-GCACCAGCACATGCCCAAGCCCAGC
* **
16445012 ATGTGCTACCGTAACCCTCGGTCTGGTCCGATCTTAGATCGGGAATGAACTTCGTA
838 ATGTGCTGCCACAA-CC-C--TC--G---G---TT---T---G-AT---C-T-G-A
* *
16445068 TGCTTAGACTGGGAATGAACTCCATATGCCTCAGTCAACCCATGAAACGAGCGTGCGGGCGCTCA
1 T-CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGAGCGCTCA
* * * * * * *
16445133 GTCGGCCAGAGGGGCGAGATGCGCAAGCCAGGGATCGAACGGGTCCCCCTCTGCGTGCTACTGAT
65 GCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCGAT
* * *
16445198 CCTGCTA-C-CATAACCCTCGGTCTGGTTCGATCTTAGACT-GGAATGAACTCAGTATGCCTAAG
130 CCTGCTACCGCA-AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAG
* * * *
16445260 CCAACTGACGAAACGAACGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGACGC
194 CCAACCGACG-AA--AA-GAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* *
16445325 GCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGCATGCCAAT
255 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
*
16445390 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAACTTTCATGGCA
320 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * * * *
16445455 AGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGATTTGAGATTTTTTTAAATT
385 AGACGACCCATTTTCTATTTTTCATGATTTTCGAAACTCTTTACGGTTCGAGATTTTTTGAAATT
* * * * * *
16445520 TTTTTGGAAGGAGTTTTAGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCAT
450 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCCTGTATTTTTGTTGGCATGC--
* * * *
16445585 AAAAAAATTCAGCCAAAAACGCGAAGTGTACAAGATTTTGTGACCACTTGAAAAAAGTGTCCCCA
513 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCA
* * * * * * *
16445650 TTTCAGATACTTCAATGGCAATTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
578 TTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATG
* * *
16445715 TGAGTTCTCAAGGTTCGATGAGGGATAGGGAGG-CAATCTAAGGGCCAAGTACCAGCACCCATCG
643 TGAGTTCTCGAGGTTTGATGAGGGATAGGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCG
*
16445779 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCTAATGTCGTCGGTCAAGTT
707 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCC-AATGCCGTCGGTCAAGTT
* *
16445844 CTCCGACGATGCTCCGATGATTGTGCCCCGGTGAAGAAAAATGCAGCACCAGCACATGCCCGAGC
771 CTCCG-CGATGCTCCGATGA-TGTGCCCCGGTGAAGAAAAATAC-GCACCAGCACATGCCCAAGC
*
16445909 CCAGCATGTGCTGCCACAGCCCTCGGTTTGATCTGA
833 CCAGCATGTGCTGCCACAACCCTCGGTTTGATCTGA
* * * * *
16445945 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA-CCATCAAAATGAGCGTGCGAGTGCTTA
1 TCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCAT-GAAACGAGCGTGCGAGCGCTCA
* * * * *
16446009 GCCGACCAGAAGGGCGGGACGCGTAAGCCGGTGATCGATCGGGTCTCCCTCTGCATGCTACCGAT
65 GCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCGAT
* * * *
16446074 CCTGCTACCGCAAACCTCAATCCGGTCTGGTCCGATCTTAGAATGGGAATGAATTTTGTATGCCT
130 CCTGCTACCGCAAACC-C--T-CGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCT
* * * *
16446139 AAACCAACCGACGAAAGAAGCAGGCGGGCGGGCGGGCGGGCACTAAGCTGGCCAGAGAGACAGGA
191 AAGCCAACCGACG-AA-AAG-A-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
* * **
16446204 TGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGTGTGCC
252 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
16446269 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
317 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * *
16446334 GCAAGACGACCCATTTTCTATTTTTCATGATTTTCGAGACTCTTTGCGGTTCGGGATTTTTTGAA
382 GCAAGACGACCCATTTTCTATTTTTCATGATTTTCGAAACTCTTTACGGTTCGAGATTTTTTGAA
16446399 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCCTGTATTTTTGTTGGCATG
447 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCCTGTATTTTTGTTGGCATG
16446464 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCC
512 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCC
16446529 ATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGAT
577 ATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGAT
*
16446594 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATGAGGGCCAAGTACCAGCACCCATCG
642 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
16446659 CACATTATGTGCGCACAGCCCCCCCGGCTCCCCCGATCGTCGAAACCCCAATGCCGCCAGTCAAG
707 CACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAAG
* *
16446724 TTCT-C-CGA-----CGATG--GTGCCTCGGAT-AAGAAAAATACGACACCACCACATGCCCAAG
769 TTCTCCGCGATGCTCCGATGATGTGCCCCGG-TGAAGAAAAATACG-CACCAGCACATGCCCAAG
* ****
16446779 CCCAGCATGTGCTGCCGCAACCCTCGGCCCAATCTGA
832 CCCAGCATGTGCTGCCACAACCCTCGGTTTGATCTGA
* * * * * * * * *
16446816 TCTTAGACTAGGAATGAATTTCGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCACTCAG
1 TCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGAGCGCTCAG
* * * * * **
16446881 CCTG-CCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCTCTCTACGTGCTGTCGAT
66 CC-GACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCGAT
* * * *
16446945 CCTACTGCTGC-AACCCTCGGTCCGGTCC-ATTCTTAGACTGGGAATGAACTCCGTATGCCTAAG
130 CCTGCTACCGCAAACCCTCGGTCCGGTCCGA-TCTTAGACTGGGAATGAACTCTGTATGCCTAAG
** * * *
16447008 CCAACCGACGAAAAGAGTTGGCGGGTGGGCGGGTACTACCCCGGCCAGAGAGACGGGATGCGCAA
194 CCAACCGACGAAAAGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
16447073 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTGCTTGCCAATGCCA
259 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
16447138 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
324 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * * *
16447203 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
389 GACCCATTTTCTATTTTTCATGATTTTCGAAACTCTTTACGGTTCGAGATTTTTTGAAATTTTTT
* * *
16447268 TGAAAGGATTTTTGGC
454 CGGAAGGAGTTTTGGC
16447284 TATCAAGTGC
Statistics
Matches: 1950, Mismatches: 227, Indels: 109
0.85 0.10 0.05
Matches are distributed among these distances:
862 235 0.12
863 1 0.00
864 3 0.00
865 3 0.00
866 48 0.02
867 1 0.00
869 1 0.00
870 5 0.00
871 174 0.09
872 5 0.00
874 5 0.00
875 4 0.00
876 111 0.06
877 7 0.00
878 4 0.00
879 6 0.00
880 195 0.10
881 24 0.01
882 347 0.18
883 5 0.00
884 1 0.00
887 1 0.00
890 2 0.00
893 35 0.02
894 142 0.07
896 2 0.00
897 13 0.01
898 2 0.00
899 1 0.00
900 3 0.00
901 264 0.14
902 103 0.05
903 195 0.10
904 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (868 bp):
TCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGAGCGCTCAG
CCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCGATC
CTGCTACCGCAAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCC
AACCGACGAAAAGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CCCATTTTCTATTTTTCATGATTTTCGAAACTCTTTACGGTTCGAGATTTTTTGAAATTTTTTCG
GAAGGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCCTGTATTTTTGTTGGCATGCAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCAATGCCGTCGGTCAAGTTCTCCGCGATG
CTCCGATGATGTGCCCCGGTGAAGAAAAATACGCACCAGCACATGCCCAAGCCCAGCATGTGCTG
CCACAACCCTCGGTTTGATCTGA
Found at i:16447510 original size:26 final size:26
Alignment explanation
Indices: 16447474--16447523 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
16447464 CCAGTCTGAT
16447474 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
16447500 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
16447524 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.22, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:16448399 original size:26 final size:26
Alignment explanation
Indices: 16448360--16448412 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16448350 TCGGTCCGAT
* * *
16448360 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16448386 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16448412 C
1 C
16448413 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:16449285 original size:26 final size:26
Alignment explanation
Indices: 16449249--16449301 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16449239 CGGGTCTGAT
16449249 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16449275 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16449301 C
1 C
16449302 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16449470 original size:26 final size:26
Alignment explanation
Indices: 16449434--16449486 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16449424 CTGGATCGAT
*
16449434 CTTAGACTGGGAATGAACTCCATATG
1 CTTACACTGGGAATGAACTCCATATG
*
16449460 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCATATG
16449486 C
1 C
16449487 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCATATG
Found at i:16449558 original size:185 final size:185
Alignment explanation
Indices: 16449241--16449637 Score: 562
Period size: 185 Copynumber: 2.1 Consensus size: 185
16449231 CCCTCAATCG
*
16449241 GGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
1 GGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTACACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
16449306 GTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCGGAGGGGCGAGATGCACAAGTCGGGG
66 GTCAACCAACGAAACGAACATACAGGCGCTCAGCCGGCCAGAGGGGCGAGATGCACAAGCCGGGG
* * ** * * *
16449371 ATCGGACGGGTCCCCCTTTGCGTGCTGTCGATCCTGCTATCGTAACCCTTGGTCT
131 ATCGGACGGGTCCCCCTCTACGTGCTACCGATCCTGCTACCATAACCCTCGGTCT
16449426 GGATC-GATCTTAGACTGGGAATGAACTCCATATGCTTACACTGGGAATGAACTCCGTATGCCTA
1 GG-TCTGATCTTAGACTGGGAATGAACTCCATATGCTTACACTGGGAATGAACTCCGTATGCCTA
* * * * **
16449490 AGTCAACCAATGAAATGAACATACAGGCGTTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGG
65 AGTCAACCAACGAAACGAACATACAGGCGCTCAGCCGGCCAGAGGGGCGAGATGCACAAGCCGGG
* * *
16449555 GATCGGATGGGTCCCCCTCTACTTGCTACCGATCCTGCTGCCATAACCCTCGGTCT
130 GATCGGACGGGTCCCCCTCTACGTGCTACCGATCCTGCTACCATAACCCTCGGTCT
*
16449611 GGTCTGATCTTAGACTAGGAATGAACT
1 GGTCTGATCTTAGACTGGGAATGAACT
16449638 TCGTATGCCT
Statistics
Matches: 186, Mismatches: 24, Indels: 4
0.87 0.11 0.02
Matches are distributed among these distances:
184 2 0.01
185 182 0.98
186 2 0.01
ACGTcount: A:0.23, C:0.26, G:0.28, T:0.22
Consensus pattern (185 bp):
GGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTACACTGGGAATGAACTCCGTATGCCTAA
GTCAACCAACGAAACGAACATACAGGCGCTCAGCCGGCCAGAGGGGCGAGATGCACAAGCCGGGG
ATCGGACGGGTCCCCCTCTACGTGCTACCGATCCTGCTACCATAACCCTCGGTCT
Found at i:16450364 original size:26 final size:26
Alignment explanation
Indices: 16450335--16450385 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16450325 TTGGTCCGAT
16450335 CTTAGACTGGGAATGAACTCCGTATA
1 CTTAGACTGGGAATGAACTCCGTATA
16450361 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16450386 GCCTAAGTCA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.20, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATA
Found at i:16451272 original size:26 final size:26
Alignment explanation
Indices: 16451236--16451288 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16451226 TTGGCCTGAT
16451236 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
16451262 CTTAGACTGGGGATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16451288 C
1 C
16451289 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16452168 original size:26 final size:26
Alignment explanation
Indices: 16452139--16452188 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
16452129 TTGGTCCGAT
*
16452139 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16452165 CTTAGACTGGAAATGAACTCCGTA
1 CTTAGACTGGAAATGAACTCCGTA
16452189 AGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.24, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16452183 original size:903 final size:900
Alignment explanation
Indices: 16449430--16457264 Score: 10158
Period size: 901 Copynumber: 8.7 Consensus size: 900
16449420 TGGTCTGGAT
*
16449430 CGATCTTAGACTGGGAATGAACTCCATATGCTTACACTGGGAATGAACTCCGTATGCCTAAGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * * *
16449495 ACCAATGAAATGAACATACAGGCG-TTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATC
66 ACCCATGAAACGAGCGTGCGGGCGCTT-AGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATC
* * * ** *
16449559 GGAT-GGGTCCCCCTCTACTTGCTACCGATCCTGCTGCCATAACCCTCGGTCTGGTCTGATCTTA
130 GG-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTA
* * * *
16449623 GACTAGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGACGGG
194 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGG
* * * *
16449688 CACTACGCTGGCCAAAGAGATGGAATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
259 CACTACGC-GACCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * * *
16449753 GCACATCTTCATATTTCTGCAT-CCAATGCCGTTTTTATGGCTTGTAAATTCATACAACGGTCCC
323 GCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
16449817 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAAC
388 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAC
* * * **
16449882 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTGGGAAGGAGTTTT-GCCCCAAACCTGGTAGACA
453 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATG
* *
16449946 TGATCCTTGTATTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAGAAGATT
518 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
16450011 TTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
583 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * *
16450076 AAAATCTCAAATTC-CTTTTAAAGGGGTGTGAGTTCTTGAGGTTTGGTGAGGGATAGGGGGCCAA
648 AAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
16450140 TATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTG-GACACACCCCCCGGTCTCCCCGATC
712 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-CACACCCCCC-GCCCCCCCGATC
* * * ** *
16450204 GTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAG
775 GCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAG
* * ** * **
16450269 AAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTATCACAACCCTCGGTTTGGTC
840 AAAAATGTGGCACCAGCACATGCC-AAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* *
16450331 CGATCTTAGACTGGGAATGAACTCCGTATACTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * * * * **
16450396 ACCCATGAAATGAGTGTGCGGGTGATCAGCTGGCCAGAGGGGTGGGATGCGCAAGCCGAGGATTA
66 ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
* * * * * * * * *
16450461 GTCGGGTCCCCCTTTGTGTGCTGCCGATCCTGCTACCGTAACCCTCAGTTCAGTCCGATCTTAGG
131 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGA
* * * * * *
16450526 CTGGGAATGAACTCCGTATGCCTAAGGCAACTGACGAAACAAGCAGGCGGGCAGGCGGGCGAGCA
196 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCA
* ** * * * **
16450591 CTACGCCAGTTAGAGAGACAGGATGCGCAAGCTGTGGATCG-CCGAGGTGGTAGGTGGGTTTAGG
261 CTACGCGA-CCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAG-GGTGGTAGGTGGGTTTAGG
* * * *
16450655 CACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCA
324 CACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * * * **
16450720 TAAGCCTTCACGCGAAGTTTCATGCCAAGACGACTTGTTTTCTATTTTTCATGATTTTTGAAACT
389 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT
* * * * *
16450785 TTTTACGATTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTTGCCCCAAACTTGGT--ACGT
454 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGT
* * * *
16450848 GAGCCTTATATTTTTTTTGGCAAGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
519 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* * *
16450913 TGTGGCCATTTGAAAAAAGTGTCCCCTTTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTA
584 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
16450978 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATA
649 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * * *
16451043 TAATGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCGCGATCACC
714 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGCCCCCCCGATCGCC
* * * *
16451108 GGAACCCCAATGCCGTCGGTCAGGTTCTTCGGCGATGCTCCGGCAATGGTGCCCC-AGCGAAGAA
778 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAA
** * **
16451172 AAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGCAACCCTCGGTTTGG-C
842 AAATGTGGCACCAGCACATG-CCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
*
16451231 CTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGGATGAACTCCGTATGCCTAAGTC
1 C-GATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * **
16451296 AACCCACGAAATGAGCGTTAGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATC
65 AACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATC
* * *** * *
16451361 GGCCGGGTCCCCCTCTACGTGCT-CTCGATCCTGCTATTGCAACCCTCGATCTGGTCTGATCTTA
130 GGTCGGGTCCCCCTCTGCGTGCTGC-CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTA
* ** * *
16451425 GACTGGGAATGAAGTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGACCGGACGGGCAGG
194 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGG
* * * *
16451490 TACTATGTCGACCAAAGAGACGGGATGCGTAAGCCGTGGATCGATAGGATGGTAGGTGGGTTTAG
259 CACTACG-CGACCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
16451555 GCACATCTTCATATTTCTATGTGCCAATGCCAGTTTTATGGCTTGTAAATTCATACAATGGTCCT
323 GCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * *
16451620 TTAAGCCTTCACGTGAAGTTTCCTGGCAAAACGACTTGTTTTCTATTTTTCATGATTTTCAAAAC
388 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAC
* * * *
16451685 TTTTTGCGATTCGGGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
453 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATG
16451750 TGATCCTTGTATTTTT-TTGGCATGCACAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
518 TGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * * * * * * *
16451814 TTTGTGGCCATTTGAAAAAATTGTCCCCATTTCATACACTTTAATGGCAACTAGTAGAAAAACTG
582 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* * *
16451879 TAAAATCTCAAATTC-CTTTTAAGGGGGTGTGAGTTC-TCAGGGTTTTATGAGGGATAGGGGGCC
647 TAAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTTGA-GGTTTGATGAGGGATAGGGGGCC
*
16451942 AATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGACCCCCCCGAT
710 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-CCCCCCCGAT
* *
16452007 CGCCGGAAACCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGATGAA
774 CGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAA
* * * ** * **
16452072 GAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTCCTAACGCAACCCTCAGTTTGGTC
839 GAAAAATGTGGCACCAGCACATGCC-AAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* * *
16452135 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAAATGAACTCCGTAAGCCTAAGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * *
16452200 ACCCATGAAACGAGCATGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGTAAGTTGGGGATCG
66 ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
* * * * * * *
16452265 GTCGGGTCCCCCTTTGCGTGCTGCTGATCTTGCTACCGTAACCCTCGGTCCGATCCGATCTTAGA
131 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGA
* * * * * *
16452330 TTGGGAATGAAGTCCGTATGCCTAAGCCAACTGACAAAACGAGCAGGCAGGCGGGCGGGCGGGCA
196 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCA
* * ** * * *
16452395 CTACGCCAGCCAGAGAGATAGGATGCGCAAGCTGTGGATCGCTGGGGTGGTAGGTGGGTTTAGGC
261 CTACGCGA-CCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
16452460 ACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
325 ACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* * **
16452525 AAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACAATTTTTGAAA-TG
390 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT-
*
16452589 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGT
454 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGT
* *
16452654 GATCCTTGTATATTTTGTTGGCATGCACAAAAAAATTCACCTAAAAGCTCGAAGTGTACAAGATT
519 GATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
16452719 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
583 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * *
16452784 AAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAAC
648 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * * *
16452849 ACAAGGGCTAAGTACCAACACCCATCGCACATCATGTGCGCAAACCCCCCCCGCCCCCCCGATCA
713 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC--ACACCCCCCGCCCCCCCGATCG
* * *
16452914 TCGGAACCCCAATGCCGTCGGTCAGG-T-T----C--T--T-CGACGATGGTGCCCTGACGAAGA
776 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * *
16452968 AAAATGCGGCACCGGCACATGCCCAAGCCCAGCATGTGCTACCGCAACCCTCGATCCGGTC
841 AAAATGTGGCACCAGCACATG-CCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* * *
16453029 CGATCTTAGAATGGGAATGAACTCCATAAGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * *
16453094 GCCTATGAAACGAGCGTGTGGGCGCTTAGCCGGCCAGATGGGAGGGATGCGCAAGTCGGGGATTG
66 ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
* * * * * * *
16453159 ATCGGGTCCCCTTTTGTGAGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGA
131 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGA
* * * *
16453224 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAATGAGCGTGCGGACGGGCGGGCGGGCA
196 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCA
*
16453289 CTACGTCGACCAGAA-AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGATTAGG
261 CTACG-CGACCA-AAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* *
16453353 CACATCTTCATATTTCTGA-ATTCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
324 CACATCTTCATATTTCT-ACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * *
16453417 TTAAGCATTCACATGAAGTTTCATGGCAAGACGAC-CTGTTTTCTATTTTTCATGATTTTTC-AA
388 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC-GTTTTCTATTTTTCACGA-TTTTCAAA
* * *
16453480 ACTTTTTACGGTTCGAGATTTTTTAAACTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
451 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* ** *
16453545 TGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGATCTGTACGAGA
516 TGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * *
16453610 TTTTGTGACCATTTGAAAAAAGTGTCCCAATTTTAGACACTTTAACGGCTACTGGCAGCAAACCT
581 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
16453675 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTTAGGTTTGATGAGGGTTAGGGGGCCA
646 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
* * * * * *
16453740 ATATAAGGGTCAAGTACCAGCACCCATCACACATCATGTTCGTACACCCCCTAG-CCCCTCGATC
711 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGCCCCCCCGATC
* * *
16453804 GCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGCTCCGGCGATGGTA
775 GCCGGAACCCCAATGCCGCCGGTCAGG---T-------T-CTCCGGCGATGCTCCGACGATGGTG
* * * * **
16453869 CCCTGGCGAAGAAAAATGTGGCACTAGCACATAACCAAGCCCAGCATGTGCTGCCGCAACCCTTA
829 CCCCGACGAAGAAAAATGTGGCACCAGCACAT-GCCAAGCCCAGCATGTGCTGCCGCAACCCTCG
* *
16453934 ATCCGATC
893 GTCCGGTC
* * *
16453942 CGATCTTAGACTGGGAATGAACTCCGTATTCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * *
16454007 ACCCATGAAACGAGCGTGCAGGCGCTTAGCCGGCCAGAGGGGCAGGATGCGCAAGTCAGGG-TCG
66 ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
* * * * ** * *
16454071 GTCGGGTCCCCCTCTGCCTGCTGCCGAACCTGTTGCAGCAACCCTCAATCTGGTCCGATCTTAGA
131 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGA
* * * * * *
16454136 CTAGGAATTAACTCCGTATGCCTAAGCCAATCGATGAAACGAGCGGGCGGGCGGACGGACGGGCA
196 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCA
* * * * * *
16454201 CTAGGCCGGCCAAAGAGACAGCATGCGCAAGCCGTGGAT-GATAGGGTGGTACGTGGATTTAGGC
261 CTACG-CGACCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
*
16454265 ACATATTCATATTTCT--GTGACCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
325 ACATCTTCATATTTCTACGTG-CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * *
16454328 TAAGCCTTCACGTGAAGTTTCATGGAAAGATGACTCGTTTTTTATTTTTCACGATTTTCAAAACT
389 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT
16454393 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGT
454 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGT
* ** * *
16454458 GATCCTTGTATTTTTTTTGGCATGCACAAAAACGTTCAGCTAAAAACTCAAAATGTACAAGATTT
519 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
16454523 TGTGACCAATTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTA
584 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
16454588 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATA
649 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATA
* * *
16454653 TAAGGGCCAAATACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCACCGATCGTC
714 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGCC
* *
16454718 GGAACCCCAATGCCGCCAGTCAAG---T-------T-CTCCGACGATGGTGCCCCGACGAAGAAA
778 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAA
* *
16454772 AATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGGTC
843 AATGTGGCACCAGCACATG-CCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
** * * * *
16454831 TAATCTTAAACTGGGAATGAACTCCATAAGCTTAGACTGGGAATGAACTCTGTATGCCTAGGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* *
16454896 ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCGGAGGGGAGGGATGCGCAAGTCGGGGATCG
66 ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
** * * * ** * * * *
16454961 GTCAAGTCCCCTTTTGCGAGCTATCAATCTTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGA
131 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGA
* * * * * * **
16455026 CTAGGAATGAACTCTGTATGCCTAAGCCAACCGACAAAATGAGCGTGCGGGCAGGCGGATGGGCA
196 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCA
* * *
16455091 CTACGTCGGCCAGAA-AGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGATTAGG
261 CTACG-CGACCA-AAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* * * *
16455155 CACATCTTAATA-TTCTGA-ATGCCAATGCCTTTTTTGTGGCTTGTAAATTCATACAATGGTCCC
324 CACATCTTCATATTTCT-ACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * *
16455218 TTAAGCATTCACATGAAGTTTCATGGCAAGACGACCCATTTTCTATTTTTCACGATTTTTC-AAA
388 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAA
* * *
16455282 CTTTTTGCGGTCCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAT
452 CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAT
* * ** *
16455347 ATGATGCTTGTATTTTT-TTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGATCTGTACAAGAA
517 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
16455410 TTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
582 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
16455475 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGTTAGGGGGCCAA
647 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
* ** * * * *
16455540 TATTAGGGCCAAGTACCAGCACCCATCGCACATCATGTTTGTACACCCCCTGGCCCCTCGATCGC
712 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGC
* ** * * * *
16455605 CAGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATAGTGCCCTGGCGAAGAA
777 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAA
* * * * * *
16455670 AAATGTGGCACTAGCACATAACCAAGCCCAGCATGTGCTGCCGTAACACTAGGTCAGGTC
842 AAATGTGGCACCAGCACAT-GCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* *
16455730 TGATCTTAGGCTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* ** *
16455795 ACCCATGAAACGAGCATGCGGGCG-TTCAGCCATCCAGAGGGGCGGGATGCGCAAGTCGGAGATC
66 ACCCATGAAACGAGCGTGCGGGCGCTT-AGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATC
* * * ** *** *
16455859 GATCGGGTCCCCCTCTGCATGCTGCCAATCCTGCTATCATTA-CCTCTGTCCGGTCTGATCTTAG
130 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAG
* * * *
16455923 ATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGACGGGCGGGCAGGC
195 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGC
* *
16455988 ACTAGGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGAT-GATAGGGTGGTAGGTGGGTTTAGG
260 ACTACG-CGACCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* * * *
16456052 TACATATTCATATTTCTGCGTACCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
324 CACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* *
16456117 TAAGCCTTCACGTGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTAACGATTTTCAAAACT
389 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT
* *
16456182 TTTTATGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
454 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGT
***** * * ** * *
16456247 GATCAGCACATTTTTCTTGTCATGCACAAAAACGTTCAGCTAAAAACTCAAAATGTACAAGATTT
519 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
16456312 TGTGACCAATTGAAAAAAGTGTCCCCATTTCAGACTCTTTAATGGCTACTGGCAGCAAACCTGTA
584 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
** *
16456377 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGAGATA-GGGGCCAATA
649 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATA
* *
16456441 TAAGGGCCAAGCAGCAGCACCCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCGCC
714 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGCC
* * * * * ** * *
16456506 AGAACCCCAATACCGCCGATCAGGTTCTCTGGTGATGCTCCGACGAAAGTGCCCCGGCAAAGAAA
778 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAA
*
16456571 AATGTGGCACCAGCACCA-G--AA----A-AATGT--T---GCAACCCTCGGTCCGGTC
843 AATGTGGCACCAGCA-CATGCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* * * * * * *
16456617 CTATTTTAGACTGGGAATGAACTCCGTACGCTTAGATTGGGAGTGAACTCCATATGCCTAAGTCA
1 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * *
16456682 ACCCATGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGTCAGGGATCG
66 ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
** * * * ** * *
16456747 ACCGGGTCCCCCTCTGCGTGCTGCCTATCTTGCTGCCGCAACACTCGGTATGATCTGATCGTAGA
131 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGA
*
16456812 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGTGGGCGGGCGGGCGGGCA
196 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCA
* * * * *
16456877 CTAAGCTGACCAAAGAGACAGGATGCGGAAGCCATGGATCGATAGGGTGGTAGGTTGGTTTAGGC
261 CTACGC-GACCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* *
16456942 ACATCTTCATATTTCTGCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
325 ACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* * * *
16457007 AAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTTTTTTAATTTTCACGATTTTCAAAACCT
390 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTT
** * *
16457072 TTTGTGGTTCGTGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGAAGATGTG
455 TTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTG
*** * *
16457137 ATCCTTGTATTTTTGTTCATATGCACAAAAAGATTCAGCTAAAAACTTGAAGTGTACAAGATTTT
520 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
*
16457202 GTGAGCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
585 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
16457265 GTGCTGTCGT
Statistics
Matches: 6065, Mismatches: 767, Indels: 216
0.86 0.11 0.03
Matches are distributed among these distances:
887 160 0.03
888 142 0.02
889 701 0.12
890 155 0.03
891 241 0.04
892 12 0.00
893 204 0.03
894 529 0.09
895 12 0.00
897 43 0.01
898 278 0.05
899 281 0.05
900 233 0.04
901 1061 0.17
902 179 0.03
903 802 0.13
904 193 0.03
905 47 0.01
906 9 0.00
908 1 0.00
909 6 0.00
910 380 0.06
911 71 0.01
912 139 0.02
913 186 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
ACCCATGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGA
CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCA
CTACGCGACCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
CATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTT
TTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGA
TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATA
AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGA
ACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT
GTGGCACCAGCACATGCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
Found at i:16453853 original size:11 final size:11
Alignment explanation
Indices: 16453833--16453865 Score: 57
Period size: 11 Copynumber: 3.0 Consensus size: 11
16453823 CGGTCAGGTT
*
16453833 CTCCGACGATG
1 CTCCGGCGATG
16453844 CTCCGGCGATG
1 CTCCGGCGATG
16453855 CTCCGGCGATG
1 CTCCGGCGATG
16453866 GTACCCTGGC
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
11 21 1.00
ACGTcount: A:0.12, C:0.36, G:0.33, T:0.18
Consensus pattern (11 bp):
CTCCGGCGATG
Found at i:16453974 original size:26 final size:26
Alignment explanation
Indices: 16453945--16453996 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16453935 TCCGATCCGA
16453945 TCTTAGACTGGGAATGAACTCCGTAT
1 TCTTAGACTGGGAATGAACTCCGTAT
*
16453971 TCTTAGATTGGGAATGAACTCCGTAT
1 TCTTAGACTGGGAATGAACTCCGTAT
16453997 GCCTAAGTCA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.17, G:0.23, T:0.33
Consensus pattern (26 bp):
TCTTAGACTGGGAATGAACTCCGTAT
Found at i:16455770 original size:26 final size:26
Alignment explanation
Indices: 16455734--16455786 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16455724 CAGGTCTGAT
*
16455734 CTTAGGCTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16455760 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16455786 C
1 C
16455787 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16457333 original size:26 final size:26
Alignment explanation
Indices: 16457295--16457366 Score: 108
Period size: 26 Copynumber: 2.8 Consensus size: 26
16457285 CGGGTCTGAT
*
16457295 CTTAGACTAGGAAAGAACTCTATATG
1 CTTAGACTAGGAATGAACTCTATATG
* * *
16457321 CTTAGACTGGGAATGAACTCTGTGTG
1 CTTAGACTAGGAATGAACTCTATATG
16457347 CTTAGACTAGGAATGAACTC
1 CTTAGACTAGGAATGAACTC
16457367 CGTATGCCTA
Statistics
Matches: 41, Mismatches: 5, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 41 1.00
ACGTcount: A:0.32, C:0.17, G:0.24, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCTATATG
Found at i:16458235 original size:26 final size:26
Alignment explanation
Indices: 16458206--16458258 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16458196 CCAGTCCGAT
*
16458206 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16458232 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16458258 C
1 C
16458259 CTAGGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16460898 original size:896 final size:900
Alignment explanation
Indices: 16459127--16461795 Score: 3696
Period size: 896 Copynumber: 3.0 Consensus size: 900
16459117 CTGGGAATCC
* * * * * * **
16459127 GTATGCCTAAGTGAACCCACTAAACGAACGTGCGGGCACTCAACCGGCCAGAGGGGCGGGATGCA
1 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGTG
* * * * * * * * * * *
16459192 CAAGCCGGGGATCGGCCT-GATCCACTTCTGTGTGCTACCGATCCTGCTGTCGCAACACTCGGTC
66 TAACCCGAGGATCGG-CTAGCTCC-CCTATGCGTGCTGCCTATCCCGCTGTCGCAACCCTCGGTC
* * * *** * *
16459256 CGG-TCTAATCTTAGACTGGGAATGAACTCCATATGCCTAAGACAACCGACGAAACGA---G-CG
129 TGGTTC-GATCTTAGACTGGGAATGAATTTTGTATGCCTAAGCCAACCGATGAAACGAGCGGACG
*
16459316 GGC--G--GGCGGGTGGGCA-TTACGCCAGCCAG-AGAGACGGGAT-GCACAAGCCGTGGATCGA
193 GGCAGGCAGGCGGGCGGGCACTTACGCCAG-CAGAAGAGACGGGATCGCA-AAGCCGTGGATCGA
* * * *
16459374 -TAGGGTGGTAGGTGGGTTTAGGCACAACCACACATTTTTG-TGCACCAATGCCATTTTTATGGC
256 CTAGGGTGGTAGGTGGGTTTAGGCAC-ATCTCATATTTCTGCTG--CCAATGCCATTTTTATGGC
* *
16459437 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCAAGACGACTCGTTTT
318 TTGTAAATTCATACAATGGTCCC-TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* ** *
16459502 CTATTTTTCATGATTTTCGAAAGTTTTTGCGGTTCGAGATTTTTTAAAACTTTTTCGGAAGGTGT
382 CTA-TTTTCATGATTTTCAAAACATTTTGCGGTTCGAGATTTTTTAAAACTTTTTCGGAAGGAGT
*
16459567 TTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCT
446 TTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
16459632 AAGAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
511 AA-AACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
16459697 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
575 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* *
16459762 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA-ACATGTGCAC
640 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATA-TTGCGCAC
16459826 ACACCCCCAG-CCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCC
704 AC-CCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCC
*
16459890 GGTGATCGTGCCCCGACGAAG-AAAATGCGGCACCAGCACATACTCGAGCCCAGCATGTGCTGCC
768 GGTGATCGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCC
16459954 GCAACCCTCGGTCCGATCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTAGGAATGAAC
833 GCAACCCTCGGTCCGATCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTAGGAATGAAC
16460019 TTT
898 TTT
16460022 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGTG
1 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGTG
16460087 TAA-CCGAGGATCGGCTAGCTCCCCTATGCGTGCTGCCTATCCCGCTGTCGCAACCCTCGGTCTG
66 TAACCCGAGGATCGGCTAGCTCCCCTATGCGTGCTGCCTATCCCGCTGTCGCAACCCTCGGTCTG
16460151 GTTCGATCTTAGACTGGGAATGAATTTTGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGGC
131 GTTCGATCTTAGACTGGGAATGAATTTTGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGGC
* ** * * *
16460216 AGGCAGGCGGGCGGGCACGTATACTCGGGCGGGAAGAGACGGGATCGCAAAGCTGTGCATCGACT
196 AGGCAGGCGGGCGGGCAC-T-TACGCCAGC-AGAAGAGACGGGATCGCAAAGCCGTGGATCGACT
16460281 AGGGT-GTAGGTGGGTTT-GGCACATCTCATATTTCTGCATTGCCAATG-CATTTTTATGGCTT-
258 AGGGTGGTAGGTGGGTTTAGGCACATCTCATATTTCTGC--TGCCAATGCCATTTTTATGGCTTG
16460342 TAAATTCATACAATGGTCCCTAAGCCTTCACAGTGAAG-TTCATGGCAAGACGACTCGTTTTCTA
321 TAAATTCATACAATGGTCCCTAAGCCTTCAC-GTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * *
16460406 -TTTCATGATTTT-TAAA-ATTTTGCGGTTTGGGATGTTTGTAAAA-TTTTTCGGAAGGGAGTTT
385 TTTTCATGATTTTCAAAACATTTTGCGGTTCGAGAT-TTTTTAAAACTTTTTCGGAA-GGAGTTT
* * *
16460467 TGGCCCCAAACTTGGTAGACATGATCCTTATAGTTTTT-TT-GCATGCACAAAAAAATTCAGCTA
448 TGACCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* * *
16460530 AAACTCGAAGTGTACAAGATTTTTGTGACCATTTCAAAAATG-GTCCCCCATTTCAGACACTTTA
512 AAACTCGAAGTGTACAAGA-TTTTGCGACCATTTGAAAAAAGTGT-CCCCATTTCAGACACTTTA
* * * * * *
16460594 ATGGGTACT-TCAGCAAACCTATAAAATCTCAAATGCCCTTTAAAGGGGTGTGCGTTATCTC-AG
575 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG-T-TCTCGAG
* *
16460657 GTTTGATGA-GGATA-GGGGCCAAAATAAGGGCCAAGTACCAGCACCCATCACACATATTGCGCA
638 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATATTGCGCA
16460720 CACCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCC
703 CACCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCC
16460785 GGTGATCGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCC
768 GGTGATCGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCC
16460850 GCAACCCTCGGTCCGATCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTAGGAATGAAC
833 GCAACCCTCGGTCCGATCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTAGGAATGAAC
16460915 TTT
898 TTT
16460918 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGTG
1 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGTG
16460983 TAACCCGAGGATCGGCTAGCTCCCCCTATGCGTGCTGCCTATCCCGCTGTCGCAACCCTCGGTCT
66 TAACCCGAGGATCGGCTAGCT-CCCCTATGCGTGCTGCCTATCCCGCTGTCGCAACCCTCGGTCT
16461048 GGTTCGATCTTAGACTGGGAATGAATTTTGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGG
130 GGTTCGATCTTAGACTGGGAATGAATTTTGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGG
*
16461113 CAGGCAGGCGGGCGGGCAC-TACGCCTGCCA-AAGAGACGGGATGCGC-AAGCCGTGGATCGAC-
195 CAGGCAGGCGGGCGGGCACTTACGCCAG-CAGAAGAGACGGGAT-CGCAAAGCCGTGGATCGACT
* *
16461174 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCGTGGCAATGCCATTTTTATGGCTTG
258 AGGGTGGTAGGTGGGTTTAGGCACATC-TCATATTTCTGC-TGCCAATGCCATTTTTATGGCTTG
* * * *
16461239 TAAATTCATACAATGGTCCATTAAGCCATT-ACGTGAAGTTTCATGGCGAGACAACTCGTTTTTT
321 TAAATTCATACAATGGTCC-CTAAGCC-TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * * * *
16461303 ATTTTTTACGATTTTCAAAACATTTTCCAGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTT
384 A-TTTTCATGATTTTCAAAACATTTTGCGGTTCGAGATTTTTTAAAACTTTTTCGGAAGGAGTTT
* *
16461368 TGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAGAAAACAATTTCA-CTA
448 TGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-AAATTCAGCT-
* * *
16461432 AAAACTTGAAGTGTACAACATTTTGCGACCATTTGAAAAAAGTGTCCCCGTTTCAGACACTTTAA
511 AAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
16461497 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTCTCGAGGT
576 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCGAGGT
16461562 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
640 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT-AT-TGCGCA
* * * *
16461627 CACCCCCCCGGCCCCCCCGATCATCGGAACCACAATGCCGCCGGTCAGGTTCT----T-A-----
703 CA-CCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTC
* * * ** * * **
16461682 -GGCGATGGTGCCCCGATGAAGAAAAACACGACACCAGCACATGCCCGAGCCCAGCATCAGCTGC
767 CGGTGATCGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGC
* * * *
16461746 CACAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
832 CGCAACCCTCGGTCCGATCCGATCTTAGACT-GGAATGAACTCCGTATGC
16461796 CTAAGCCAAC
Statistics
Matches: 1591, Mismatches: 121, Indels: 121
0.87 0.07 0.07
Matches are distributed among these distances:
893 86 0.05
894 60 0.04
895 203 0.13
896 271 0.17
897 234 0.15
898 228 0.14
899 20 0.01
900 15 0.01
901 95 0.06
902 110 0.07
903 96 0.06
904 32 0.02
905 74 0.05
906 13 0.01
907 8 0.01
908 46 0.03
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (900 bp):
GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGTG
TAACCCGAGGATCGGCTAGCTCCCCTATGCGTGCTGCCTATCCCGCTGTCGCAACCCTCGGTCTG
GTTCGATCTTAGACTGGGAATGAATTTTGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGGC
AGGCAGGCGGGCGGGCACTTACGCCAGCAGAAGAGACGGGATCGCAAAGCCGTGGATCGACTAGG
GTGGTAGGTGGGTTTAGGCACATCTCATATTTCTGCTGCCAATGCCATTTTTATGGCTTGTAAAT
TCATACAATGGTCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTCA
TGATTTTCAAAACATTTTGCGGTTCGAGATTTTTTAAAACTTTTTCGGAAGGAGTTTTGACCCCA
AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACTCGAA
GTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATATTGCGCACACCCCCCAGCCC
CCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGTGATCGTGCCC
CGACGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
CGATCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTTT
Found at i:16462515 original size:26 final size:26
Alignment explanation
Indices: 16462476--16462536 Score: 99
Period size: 26 Copynumber: 2.4 Consensus size: 26
16462466 CCCTCGGTCC
16462476 ACTCTG-AT-CTTAGACTGGGAATGA
1 ACTCTGTATGCTTAGACTGGGAATGA
16462500 ACTCTGTATGCTTAGACTGGGAATGA
1 ACTCTGTATGCTTAGACTGGGAATGA
*
16462526 ACTCCGTATGC
1 ACTCTGTATGC
16462537 CTATGTCAAC
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
24 6 0.18
25 2 0.06
26 26 0.76
ACGTcount: A:0.26, C:0.20, G:0.25, T:0.30
Consensus pattern (26 bp):
ACTCTGTATGCTTAGACTGGGAATGA
Found at i:16464224 original size:26 final size:26
Alignment explanation
Indices: 16464185--16464245 Score: 99
Period size: 26 Copynumber: 2.4 Consensus size: 26
16464175 CCCTCGGTCC
16464185 ACTCTG-AT-CTTAGACTGGGAATGA
1 ACTCTGTATGCTTAGACTGGGAATGA
16464209 ACTCTGTATGCTTAGACTGGGAATGA
1 ACTCTGTATGCTTAGACTGGGAATGA
*
16464235 ACTCCGTATGC
1 ACTCTGTATGC
16464246 CTATGTCAAC
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
24 6 0.18
25 2 0.06
26 26 0.76
ACGTcount: A:0.26, C:0.20, G:0.25, T:0.30
Consensus pattern (26 bp):
ACTCTGTATGCTTAGACTGGGAATGA
Found at i:16465121 original size:26 final size:26
Alignment explanation
Indices: 16465085--16465137 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16465075 CCAGTCCGAT
16465085 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16465111 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16465137 C
1 C
16465138 CTAAGCCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:16465864 original size:26 final size:26
Alignment explanation
Indices: 16465824--16465876 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16465814 CCAGTCTGAT
*
16465824 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16465850 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16465876 C
1 C
16465877 CTATGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16466751 original size:26 final size:26
Alignment explanation
Indices: 16466714--16466766 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16466704 CCTGTTCGAT
* *
16466714 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCATATG
16466740 CTTAGACAGGGAATGAACTCCATATG
1 CTTAGACAGGGAATGAACTCCATATG
16466766 C
1 C
16466767 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCATATG
Found at i:16467245 original size:893 final size:890
Alignment explanation
Indices: 16465111--16483960 Score: 21035
Period size: 901 Copynumber: 21.2 Consensus size: 890
16465101 ACTTCGTATG
* * *
16465111 CTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACG-GA--ACGA-GTGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * * * * *
16465172 CGGCCACTACGCCGGGCAGAGAGACGGGATGCGAAAGCTGTGCATTGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
16465237 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* **
16465302 TCCCTTAAGCCTTCACGTGAAGTTTGATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
** *
16465367 AAACTTTTTACGGTTTTGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGCCCCCAAACTTGGTA
261 AAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * * *
16465432 GACATGATCCTTGTATTTTTTTTGGTATGCACAGAAAAATTCAGCTGAAAACTCGAAGTGTACAA
326 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * **
16465497 GATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGGTACTTCCAGCAAAC
391 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
16465562 CTGTAAAATCTCAAATGCCCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
456 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
16465627 CAATATAAGGGCCAGGTACCAGCACCCATCTCACATCATGTGCG-CACACCCCCGGCCCCCCCGA
521 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGACAC-CCCCCGGCCCCCCCGA
* * * *
16465691 TCGTCGAAACCCCAATGCCACTGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCTG-CG
585 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCC-GACG
* * * * *
16465755 AAGAAAAATGCAGCACCAACACATGCCCGATCCCAGCATGTGCTGCCGTAACCCTCAATCCAG-T
638 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCC-GTT
* *
16465819 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAAATGAACTCCGTATGCCTATGTC
702 C-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * *
16465884 AACACTCGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGTGGGATGCGCAAGTCGGGGATT
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * * * * *
16465949 GGTCGGGTCCCCCTCTACGTGCTG-CTGATCCTACTACCGTAACACTTGGT-TCGATCTGAT
831 GGTCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCT-GGTCTGAT
* * * * * *
16466009 CTTAGATTGGGAATGAACTCCGTATGCGTAAGCCAACCGATGAAACGA-GCAGGTGTGCGGGTGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACG-AGGCGGGCGGGCGG
*
16466073 GTGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * *
16466138 TTTAGGCACATCTTCATATTTCTACATGCCAATTCCTTTTTTATGGCATGTAGATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
16466203 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGGTTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * * *
16466268 AAAACTTTTTGCGGTTCGGGATATTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGT
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * **
16466333 AGATGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTATAAGTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
16466398 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
16466463 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
455 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * * * * *
16466528 CCAATAGAAGGGCCATGTACCAGCGCCAATCGCACATAATGCGTGACACCCCCCGGCCCCCCCGA
520 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGACACCCCCCGGCCCCCCCGA
* * * * *
16466593 TCGCCGGAACCCCAATGCCGCCGTTCAGGTTCTCCGGCGATGATGCCTCGACGGATAAAAATGCG
585 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCG
*
16466658 GCACCAGCATATGCCCGAGCCCAGCATGTGCTGCCG-AACCCTC-ATCCCTGTTCGATCTTAGAC
650 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGAT-CC-GTTCGATCTTAGAC
* * * *
16466721 TGGGAATGAACTCCGTATGCTTAGACAGGGAATGAACTCCATATGCCTAAGTCAACCCGCAAAAC
713 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * *
16466786 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGACGGGAT-CGTAAGCCAGGGATCGGTTGAGTCCCC
778 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC
* * * *
16466850 TTCTGCATGCTGTCGATCCTACGGCCGCAACCCTCGGTCTGGTCTGAT
843 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * * * *
16466898 CTTAGACAGAGAATGAACTCCGTATGCCTAAGCCAACCGATGGAACGAGCGGACGGGTGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-C-GA--GGCGGGCGGG
* * * * *
16466963 CTGGCGGGCACTATGCCGGCCAGACAGATGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGT
62 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* *
16467028 GGGTTTAGGTACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
127 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
16467093 ATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGTAAGACGACTCGTTTTCTATTTTTCACAATT
192 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
** * *
16467158 TTCAAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTA-TTTTGGCCCCAAAAT
257 TTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGG-AGTTTTGGCCCCAAACT
* * *
16467222 TGGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCGAAGTG
321 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
*
16467287 TACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTTAATGGCTACTGGCAG
386 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * *
16467352 TAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAG
451 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * * *
16467417 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATCTGCACACACCCCCCCGG-GC
516 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC-GACA-CCCCCCGGCCC
*
16467481 CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGGCAATGCTCCGACGATGGTGCCC
579 CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC-TC--C---G----G-CGATGGTGCCC
* * * *
16467546 TGACGAAGAAAAATGTGGCACCAGCACATGCACGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
633 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATC
* * *
16467611 CGATCCGCTCTTAGACTGGGAATGAACTCC-AATTGCTTAGACTGGGAATGAACTCCGTATGCCT
698 CG-TTCGATCTTAGACTGGGAATGAACTCCGTA-TGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * *
16467675 AAGTCAACGCACGAAATGAGCGTCCGGGCACTCAGCCGGCCAGAAGGGCGGGATGCGCAAGCCAG
761 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * * *
16467740 GGTTCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTG-TGGCCACAACCCTCGATCCT-GTTTG
826 GGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCT-GCCGCAACCCTCGGT-CTGGTCTG
16467803 AT
889 AT
* ** * *
16467805 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACTAACG-GA--ATGA-GCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * * *
16467866 CGGGCATTACGTCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** **
16467931 TTAGGCCCATCTTCATATTTCTATGTGCCAATAACATTTTTATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
16467996 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTT-TAACTTTTCACGATTTTT
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT-ATTTTTCACGATTTTT
* * * * *
16468060 GAAACTTTTTATGGTCCAAGATTTTTTAAAATTTTTTC-GAATGGATTTTTGGCCACAAACTTGG
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAA-GGAGTTTTGGCCCCAAACTTGG
16468124 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
16468189 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
** *
16468254 ACCTGTAGCATCTCTAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GTTTGATGAGGGATAGGGG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
16468318 GCCAATATAAGGGCCAAGTACCAGCACCCATCCCATATCATGTGCGCACACCCCCCCGACCCCCC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACA-CCCCCCGGCCCCCC
* * *
16468383 CGATCGTCGGAACCTCAATGCCGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGG
582 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCCGA
* * * * * * *
16468448 TGAACAAAAATGCAGCACCAGCACATTCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGG
636 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGT
* *
16468513 TCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTGCGTATGCCTAAGT
701 TC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * *
16468578 CAACCCATGAAACGAGCGTGCGAGCGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCGGGGAT
765 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * * ** *
16468643 CGATCGAGTCCCCCTCTGCGTGCTGCCAATCCTTCTGCCACAACCCTTAGT-TCGGTCTAAT
830 CGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCT-GGTCTGAT
* * *
16468704 CTTAGACT-GGAATGAATTCCGTATGCCTAAGCCAACCGACGAAATGA-GCAGGCGGACGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACG-AGGCGGGCGGGCGG
* * * *
16468767 GC-GGCACTACGTCGACCAGAGAGACGGGGTGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16468831 TTTAGGCACATCTTCGTATTTCTGCATGCCAATGCCATTTTCATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
16468896 GTCCCTTAAGCCTTCACGTGAAGTTTAATGGTAAGACGACTCGTTTTCTATTTTTCACAATTTTC
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * *
16468961 AAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTA-TTTTGGCCCCAAAATTGG
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGG-AGTTTTGGCCCCAAACTTGG
* * *
16469025 TAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
16469090 AAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
16469155 ACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGCG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * ***
16469220 GCCAATATAAGGGCCAAGTACCAGTACCCATCACACATCATGTGTG-CACACCCCCGGCCCCTTT
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGACAC-CCCCCGGCCCCCCC
* * * **
16469284 GATCGCCGAAATCCCAATGCCGCCGGTCCGATTCTCCGGTGATGCTCCGACGATGGTGCCCCGGT
583 GATCGCCGGAACCCCAATGCCGCCGGT-C-A------GGT--T-CTCCGGCGATGGTGCCCCGAC
* * * * * * * * *
16469349 GAAGAAAAAAGTGGCACCAACACGTGCCCGAGCCCAGTATGTGTTGCCGCAACCATCGGTCCCAT
637 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGAT-CCGT
* *
16469414 T-GAATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTACGTATGCCTAAGT
701 TCG-ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
16469478 CAACCCTCAAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGAT
765 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * *
16469543 CGGTTGGATCCCCCTCTGCGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCTAGTCTGAT
830 CGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * * * *
16469604 CTTAGACTGGGAATGAACTCAGTATTCGTAAGCCAACCGATGAAACGA-GCAGTCGGGCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACG-AGGCGGGCGGGCGG
* *
16469668 GCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
** * *
16469733 TTTAGGCACATCTTTGTATTTCTACGTGCCAATGCCA-TTTTATGGCTTGTAAATTCATGCAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * ** *
16469797 GTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTCTCATAATTTTC
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * *
16469862 AAAACTTTTTACGGTTTAGAATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
*
16469927 AGACGTGATCCTTGTATTTTTTTTGGCATGCA-AAAAGAAATTCAGCTAAAAACTCGAAGTGTAC
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-AAATTCAGCTAAAAACTCGAAGTGTAC
*
16469991 AAGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
16470056 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAAGGATAGTGG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * ** *
16470121 GCCAATATAAGGGCCAGGTACTAGCACCCATCGCATATCATGTGCGCACACCCCCCCGAGCCCCT
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACACCCCCCGGCCCCCCC
* * * * * * *
16470186 AATCACCGGAACACCAATGCCACCGATCAGGTTCTACGGGGATGGTGCCCCGACGAAGAAAAATG
583 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATG
* * * * * *
16470251 TGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCGACCCTCAGTTCAGTCCGATCTTAGA
648 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GATCCGTTCGATCTTAGA
* *
16470316 CTGGGAATGAACTCCATATGCTTAGA-TGGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAA
712 CTGGGAATGAACTCCGTATGCTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * ** **
16470380 ACTAGCGTACGGGCGCTCAGCCGGCCAGAGGGG-GTGAGATGCGCAAGTCGGGGATCGACCAAGT
776 ACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG-G-GATGCGCAAGCCGGGGATCGGTCGGGT
* * * * ** * *
16470444 CCCCCTTTACGTGCTGCCGATCCTGCTACCATAACCCTCAGT-TCGGTCCGAT
839 CCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCT-GGTCTGAT
* * * *
16470496 CTTAGACTGGGAATGCACTCCGTATGCCTAAGCTAACCGACG-AA--ACGA-GCGGGCGGGTGGA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * * * * *
16470557 CGGACACTAAGCCGGCCAGAGAAACGGGATGCGTAAGGCGTGGATCGATAGGGTGGTACGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** *
16470622 TTTGGCACATCAACATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATTCAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
16470687 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
** * *
16470752 AAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAATTGGTA
261 AAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
16470817 GATGTGATCCTTGTATTTTT-TTGGGCATGCACAAAAAAATTTAGGTAAAAACTCGAAGTGTACA
326 GACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * * ** ** *
16470881 AGATTTTGAGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTGATGGGGA-TAGGGGGCCA
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT-GGCAGCAA
* ** * * ****** * ** * ** ****
16470945 A--TATAAGTTC-CAAGTAC-C----AGCACCCAT-CGCACATC-A--TGTGCACACACCCCTCC
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-TCGAGGTTTG-A-TGAGGGAT--
**** * **** * * ** * ** * * ** ***
16470998 AGCCCCCCGATCGCCGGAACCCCAA-TGCC--C-CCGGTC-AAGTTCTTCG-GTGATGCTCCGGG
514 AGGGGGCCAATATAAGG---GCCAAGTACCAGCACCCATCGCACATCAT-GTGCGACAC-CCCCC
*** * ** * * * * * * *
16471057 GATGGTGCCCTGA-CG-AAGAA---AAATACAGCAC---CAGG-ACAT---GC--TCGAGCCCAG
574 G--GCCCCCCCGATCGCCGGAACCCCAATGCCGC-CGGTCAGGTTC-TCCGGCGATGGTGCCCCG
* *** * * * * * * * *
16471108 -C-ATG--TGCTACCGCAACC--CTC-GGTCCG-GTCCA--ATTTTAGACTG--GGAA---T-GA
635 ACGAAGAAAAATGCGGC-ACCAGCACATGCCCGAGCCCAGCA-TGT-G-CTGCCGCAACCCTCG-
* * * *
16471157 ACTCCG-T--ATGCTTAGGCTGGGAATTAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATG
695 A-TCCGTTCGAT-CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * * **
16471219 CCTAAGTCAACCCACGAAATGAGTGTGCGGGTC-ATCAGCCGGCCAGAGAGGCGGGATATGCAAG
758 CCTAAGTCAACCCACGAAACGAGCGTGCGGG-CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * ** *
16471283 TCGGGGATCGGTCGGGTCCCCCTCTACGTG-T-TACTGATCTTGCTGCCACAACCCAAGGTCCGG
822 CCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGT-C-GATCCTGCTGCCGCAACCCTCGGTCTGG
*
16471346 TCCGAT
885 TCTGAT
** *
16471352 CTTAGACTGGGAATGAACTCCGTATAACTAAGCCAACCGATGAAACGA--A------CGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * * *
16471409 C-GG------GCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATTGATAGGGTGGTAGCTGAGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
16471467 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
16471532 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACACGACTC-TTTTCTATTTTTCATGATTTTTG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
** * *
16471596 AAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGAAAAGAGTTTTGGCCCCAAACTTGGTA
261 AAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
16471661 GACGTGATCCTTGTATATTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGATGTGTACAA
326 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
16471726 GATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAAC
391 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * * * *
16471790 TTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGGGTTCTCAAAGTTTGATGAGGGATAGGAGGC
456 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * *
16471855 CAGTATAAGTGCCAAGTACCAGCACCCATCACACATCATGTGC-ACACACCCCCTGACCCCCCCG
521 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGACAC-CCCCC-GGCCCCCCCG
* * **
16471919 ATCGCCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGTGATGCTCCGGTGATGGTGCTCCGGTG
584 ATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC---G--G---C---GATGGTGCCCCGACG
* *
16471984 AAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAA-CC-C--T-CG---
638 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGTTC
*
16472041 G-TC-----C---G---G---TCC-AAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
703 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * *
16472089 CCCACGAAACGAGCGTGTGGGCGCTCAGCCGACCAGAGGGGCGGGATGCACAAGCCGAGGATCGA
768 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
* * * * * * * *
16472154 CCGAGTCCCCATCTGTGTGCTG-CTGATCCTACTGCCCCAACTCTCGGT-TCGGTCCGAT
833 TCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCT-GGTCTGAT
* * * * *
16472212 CTTAGACTGGGAATCAACTCCGTATGCCTAAGCCAACCGACGAAACGA-GTGGGCTGGAGGGTGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACG-AGGCGGGCGGGCGG
* *
16472276 GCGGGCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTTGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * * *
16472341 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGTCTTGTAAACTCAAAGAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
16472406 GTTCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
*
16472471 GAAACTTTTT----TT---G----------A---------AAGGAGTTTTGACCCCAAACTTGGT
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
16472510 AGACGTGATCCTTGTATTTTGGTTGGTATGCATAAAAAAATTCAGCTAAAAACTCTAACTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
16472575 AGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAA
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * * *
16472640 CCTATAAAATCTCAAATGCTCTTTAAAGCGGTGTGAGTTATCGAGGTATGATGAGGGATAGGGGG
455 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * * *
16472705 CCAAGATAAGGGCCAAGTACCAGCACCCATCACACATCAAGTGCACACACCGCCCCGGCCCCCCT
520 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC-GACACC-CCCCGGCCCCCCC
* * * * * *
16472770 GATCGTCGAAACCCTAATGCCGTCGGTCAGGTTCTCCAGTGATGCTTCGACGATGGTGCCCTGAT
583 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC------G----G-CGATGGTGCCCCGAC
* * * * * * * * *
16472835 GAAGAGAATTGTGACACCAGCACATGCCCGAGCCCAGCATGTTCTACTGCAACCCTCGGTCCAAT
637 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCC-GT
* *
16472900 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTC
701 TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* *
16472965 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCTGGGGATC
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * **
16473030 GGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCAAT
831 GGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * *
16473090 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCGAACCGACAAAACGAGCG-GGCGGGCGGGCGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-CGAGGCGGGCGGGCGG
* **
16473154 GCTGGCACTACATCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
16473219 CTTA-GCACATCTTCATATTTCTGCATGCCAAATGCCATTTTTATGGCTTGTAAATTCATACAAT
130 TTTAGGCACATCTTCATATTTCTACATGCC-AATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
16473283 GGTCCCTTAAGCCTACACGTGAAGTTTTAT-GCAAGATGACTCGTTTTCTATTTTTCACAATTTT
194 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * * *
16473347 TGAAACATTTTGCGGTTCTGGATTTTTT-AAATTTTTTTGGAAGGA-TTTCTAGCCCCAAACTTG
259 TGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTT-TGGCCCCAAACTTG
* * * * *
16473410 GTAGACATGATCATTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCCAAAAACTCAAAGTGTA
323 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
16473475 CAAGATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCA
388 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
16473540 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATGGGG
453 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
16473605 GGCCAATATAAGGGCCAAGTACGAGGACCCATCACACATCATGTGCGCACACCCCCCCGGCCACC
518 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACA-CCCCCCGGCCCCC
* * * * *
16473670 CCGATTGTCAGAACCCCAATACCGTCGGTCAGGTTCTCCGGCGATATTTCGACGATGGTGCCCCG
581 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--CG-------G-CGATGGTGCCCCG
* * *
16473735 GCAAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAA----C---CC-
635 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCG
16473792 -TCGATC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGT
700 TTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * *
16473840 CAACCCACGAAATGAGCGTGCAGGCGCTCAACCGGCTAGAGGGGCGGGATGCGTAAGCCGAGGAT
765 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * ** ** * *
16473905 CGATCGAGTCCCCCTCTATGTGCTACCGATCCTGCTGTCGCAACCCTCGGTCTGATCTGAT
830 CGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
*
16473966 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAATCGAGCG-GGCGGGCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-CGAGGCGGGCGGGCGG
* * *
16474030 GCGGGTGTGCATTACGCCGGCCAGACAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
65 GC--G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
** *
16474095 TGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTATAAATTCATAC
126 TGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * * *
16474160 AATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACGACTCATTTTCTTTTTTTCACAAT
191 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * **
16474225 TTTTGAAACTTTTTATGGTTC-GAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTAACCCCAAAC
256 TTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* *
16474289 TTGGTAGACGTGATCGC-TGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAG
320 TTGGTAGACGTGATC-CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
16474353 TGTACAATATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACT-GC
384 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
16474417 AAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
449 -AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* *
16474481 TAGAGGGCCAATATAAGGGCCAAGTACCAGAACCCATCGCACATCATGTGCGCACACCCCCGCGG
513 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACACCCCC-CGG
* * * * * *
16474546 CCACCCTGATCGTCGGAACCCCAATACCGCCGATCAGGTTCTCTAGTGTGCTCCGACGATGGTGC
576 CCCCCCCGATCGCCGGAACCCCAAT---GCCG--CCGG---TC-AG-GTTCTCCGGCGATGGTGC
* * * *
16474611 CCCGACGAAGAAAAAGGCGGCACCAACACATGCCTCTAGCCCAGCATGTGCTGCCGTAACCCTC-
631 CCCGACGAAGAAAAATGCGGCACCAGCACATGCC-CGAGCCCAGCATGTGCTGCCGCAACCCTCG
16474675 A--------ATC-----C--GG--T---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCC
695 ATCCGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * *
16474716 TAACTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGTGGGATGTGCAAGCCG
760 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * ** * * **
16474781 GGGATCGATCGAGTCCCCCTTTGCGTGCTACCGATCCTGCTGCCGTAACCCTCGGTCTGATCCAA
825 GGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGA
16474846 T
890 T
* * * * *
16474847 CTTAGACTGGGAAAGAACTTCGTATGCCTAAGCCAAACGACGAAACGAGCG-GGCGGGCCGGC-A
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-CGAGGCGGGCGGGCGG
* * * * * *
16474910 GTGGGTATTACGCCGGCCAGACAGACAGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
16474975 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
16475040 GTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACTCATTTTCTATTTTTCACGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* ** *
16475105 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCTTAAGGAGTTTTGGCCCAAAACTTGGT
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
16475170 AGATGTGATCCTTGTATTTTTTTTGCCATGCACAAACAAATTCAGCTAAAAACTCAAAGTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
16475235 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
16475300 CCTGTAAAATCTCAAATGCTCTTTAAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGG
455 CCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
16475365 GCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCAAGTGCG-CACTCCTACCTCGGCCCC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGACAC-CC--CC-CGGCCCC
* * * *
16475429 CCCGATCGCCGGAACCCCAATACTGCCAGTCAGGTTCTCCGACGATACTCCGACGGTGGTACCCC
580 CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG--G------CGA---TGGTGCCCC
* * * *
16475494 GGCGAAGAAAAATGCGGCCCCAGCACATGCCTGAGCCCAGCAAT-TGCTGCTGCAACCCTCGATC
634 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC-ATGTGCTGCCGCAACCCTCGATC
* * ** *
16475558 TGGTCGGATCTTAGACTAAGAATGAACTCCGTATGCTTAGACTGGGAGTGAACTCCGTATGCCTA
698 CGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
16475623 AGTCAACCCACGAAACGAGCGTACAGGCGCTCAACCGGCTAGAGGGGCGGGATGCGCAAGTCTGG
762 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * *
16475688 GATCGGCCGCGTCCACCTCTGCGTGCTGTCGATCCTACTGCCGCAACCCTTGGTCCT-GTCTGAT
827 GATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGT-CTGGTCTGAT
* *
16475752 CTTACATTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAA--ACGA-----GCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * *
16475809 CGGGCACTATGCCGGCCA-ACGAGACGGGATGCGCAAGCCGTGTATCGATAGGGTGGTAGGTAGG
66 CGGGCACTACGCCGGCCAGA-GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16475873 TTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGT-AATTGCATACAAC
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATT-CATACAAT
16475937 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
194 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * ** *
16476002 TGAAACTTTTTAGGGTTCGGGA-TTTTTAAAATTTTTT-GGAAGGAGTTTT-GCCTGAAACTTTT
259 TGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC-TTG
* * **
16476064 TTAGATGTGATCCTTGTATTTTTGTTCCCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
323 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
*
16476129 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCA
388 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
16476194 AACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGAGAGTTCTCAAGGTTTGATGAGGGATAGGG
453 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
16476259 GGCCAATATATGGGCCAAGTAGCAGCACCCATCGCACATAATATGCGCACACCCCCCCGG--CCC
518 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACA-CCCCCCGGCCCCC
* * * **
16476322 CCTATCGCCGGAACCCCAAAGTCATCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
581 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCCG
* * * * *
16476387 ATGAAGAAAAATGTGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCG
635 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCC-
*
16476452 GTTCGATCTTAGACTGGGAA-GAACTCCGTATGCTTAGACTGGGAA-AAACTCCGTATGCCTAAG
699 GTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
16476515 TCAACCCACGAAACGAGCATGCGGGAGCTCAGCCGGCCAGAAGGGCAGGATGCGCAAGCCAGGGA
764 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
** ** * * * * *** **
16476580 TC-AACTGGGTCCCCCTCTATGTACTGTCGAACCTACTACCGCAACCCTTAATCCAGTCTGAT
829 TCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * * * *
16476642 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAATCGAACG-GGCGGGCGGTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-ACGAGGCGGGCGGGCGG
* * * * *
16476706 GCGGGCACTATGCCGGCCAGAGAGACGGGATGCACACGCCGTGGATCGATAGGTTGGTAGGTGCG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16476771 TTTAGGCACATCATCATATTTCTACATGCCAATGCCATTTTTCTTGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
16476836 GTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * * *
16476901 GAAACTTTTTGCAGTTCAGGATTTTTTAAAATTTTTTCAGAAGTAATTTT-GCCTCTAAACTTGG
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC-CCAAACTTGG
*
16476965 TAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
16477030 AAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * * * *
16477095 ACCTATAAAATCTCAAATGCTCTATATGGGGGTGCGAGTTCTCAAGGTTTGATGAAGGATAGGGG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * *
16477160 GCGAATATATGGGCCAAGTACCAGCACCCACCGCACATCATGTGCG-CAAACCCCCTGCCCCCCC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGAC-ACCCCCCGGCCCCCCC
* *
16477224 GATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGATGATGCTCCAGTGATGGTGCCCCGAC
583 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC---CG--G---C---GATGGTGCCCCGAC
* * * * * * * *
16477289 GAAGAAAAATGTGGCCCCAGCATATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTTGGTCCGGT
637 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGTT
**
16477354 CTGATCTTAGACTGGGAA-GAACTCTATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
702 C-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * *
16477418 AACCCACGAAATGAGCATGCGGGAGTTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
** * ** * * * *** **
16477483 -AACTGAGTCCCCCTCTATGTGCTGCCGATCCTACTACCGCAACCCTTAATCCAGTCTGAT
831 GGTC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
** * * *
16477543 CTTAGACTGAAAATGAACTCCGTATGCCTAAGCCAACCGACGAATCAAGCG-GGCGGGCGGTCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-CGAGGCGGGCGGGCGG
* * * * * * *
16477607 GCGGGCACTACGTCGGCCAGAGAAACGGGATGCACACGCCATGGAGCGATAGGTTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16477672 TTTAGGCACATCGTCATATTTCTGCATGCCAATGCCATTTTTATTGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
16477737 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * * * *
16477802 GAAA-TTTTTGCGGTTC-GGATTTTTTAAAATTTTTTCGAAAGTAATTTTGGCTCTAAACTTTGT
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
*
16477865 AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
16477930 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCACACACTTTAATGGCTACTGGCAGCAAA
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
16477995 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
455 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** * *
16478060 TGAATATAAGGGCCAAGTACCAGCACCCAT-GCACATCATGTGCGCACACCCCCTGACCCCCCCG
520 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACACCCCCCGGCCCCCCCG
** * * * *
16478124 ATCATCAGAACCCCAATGCTGCCGATCAGGTTCTCCGATGATGCTCCGGTGATGGTGCACCGACG
584 ATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC---G--G---C---GATGGTGCCCCGACG
* * *
16478189 AAGAAAAATGCGGCACCAGCATATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTC
638 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCC-GT-
* * *
16478254 TC-ATTTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTCTGCCTAAGTC
701 TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * *
16478318 AACACATGAAACGAGTGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCACAAGCCGAGGATC
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * * * ** * *
16478383 TGTCGGGTCCCCCTCGGTGTGCTCTCGATCCTTCTATCGCAACCCTTGGTCTAGTCTGAT
831 GGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * * *
16478443 CTTAGACTGGGAATGAACTCCATATGCCTAAACCAACCGACG-AA--ACGA-----GCGGGTGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * * * * *
16478500 CGGGCACTACGTCGTCCAGAGAGACGGGATGCGCAAGCCGTAGATCGATATGGTGGCAGCTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ***
16478565 TTAGGCACATCTTCATCTTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
16478630 TCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGACGACTCGTTTTCTATGTTTCATGATTTTTG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
** * **
16478695 AAACTTTTTACGGTTTGGGATGTTTTAAAATTTTTTCGGGGGGAGTTTTGGCCCCAAACTTGGTA
261 AAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
16478760 GACATGATCCTTGTATTTTTATTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAA
326 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
16478825 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
391 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* **
16478890 CTGTAAAATCTCAAATGCTCTTTAAGAGACTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
456 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * *
16478955 CCATATAAGGG-CAAGTGCCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGA
521 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACACCCCCCGGCCCCCCCGA
* *
16479019 TCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCC-AGCT
585 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCCGA-CG
16479083 AAGAAAAATGCGGCACC-GACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGT
638 AAGAAAAATGCGGCACCAG-CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCC-GT
* * * *
16479147 TTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGATTGAACTCTGTATGCCTAAGTC
701 TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * *
16479212 AACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCTGAGGGGCTGGATGCGCAA-CTCGGGGGT
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC-CGGGGAT
* * * ** * * * **
16479276 CGGCCGGGTCACCCTCTACGTGCTACCGATCCAGCTACCGCAACACTCGGTCTGGTCCAAT
830 CGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * * * *
16479337 CTTATACTGGGAATGAACTCCGTCTGCCTAAGCCAACTGACGAAATGA--A------CAGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * * * *
16479394 CAGGCTCTATGCCGGCTAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
16479459 TTAGGAAGATCTTCCTATTTCTACATGCCAATGCCATTTTTATGGCTTGTAGATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
16479524 TCCCTTAAGCCGTCACGTGAAGTCTT-ATGGCAAGACGACTCATTTTCTATTTTTCTCGATTTTT
196 TCCCTTAAGCCTTCACGTGAAGT-TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* ** *
16479588 GAAACTTTTTACGGTTC-GAGAGTTTTTAAAATTTTTTCAAAAAGAGTTTTGGCCCCAAACTTGG
260 GAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
16479652 TAGACGTGATCCATGTATTTTTTTTGGCATGCAC-AAAAAATTCAGCT-AAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
16479715 AAGATTTTGTGATCATTTGAAAAAAGTGT-CCCATTTCAAACACTTTAATGGCTACTAGCAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* **
16479779 ACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTTTGTTCTCGAGGTTTGATGAGGGATAGGGG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
16479844 GCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCACGTGCGAACACCCCCCCGGCCCCCC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACA-CCCCCCGGCCCCCC
* * * * * *
16479909 CGATCGCCGAAACCCCAATGCCACCGTTCAGGTTCTTCGGTGATGCTCCGACGATGGTGCCTCGG
582 CGATCGCCGGAACCCCAATG---CCG--CCGG-TC--AGGT--T-CTCCGGCGATGGTGCCCCGA
* * * * * *
16479974 TGAAGAAAAATGTGGCACTAGCACATACCCAAGCCCAGCATGTACTGCCGCAACCCTC-AGTCCG
636 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGA-TCCG
* * *
16480038 GTCTGATCTTAGACTTGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATACCTAAG
700 TTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
16480103 TCAACCCACGAAACGAGCGGGCGGGCGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCAGGGA
764 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * * ** *
16480168 TCGGCCGGGTCCCCCTCTGCGTGCTGTTGATCCTACTACCGCAACCTTC-CACTCAGTCTGAT
829 TCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCT-GGTCTGAT
* * * * *
16480230 CTGAGACTGGAAATGAACTCCGTAAGCCTAAGCCAACCGACGAAACGAGCG-GGCGGGTGGACGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-CGAGGCGGGCGGGCGG
* * * *
16480294 GTGGGTACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*** * **
16480359 TTTAGGCACATCTTCATATTTCTGTGTGCCCATGCCATTTTTATTTCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
16480424 GTCCCTTAAGCTTTCACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * *** *
16480489 AAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCAAAAAACATGGT
260 GAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
*
16480554 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
16480619 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACTCTTTAATGGCTACTGGCAGCAAA
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
16480684 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGTGTTCTCGAGGTTTGATGAGAGATAGGGGG
455 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * * * *
16480749 CCAATATAAGGGCCAGGTACTAGCACCCATCACACATCTTGTGCGCAGACCCCCCCGACCCCCCC
520 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACA-CCCCCCGGCCCCCCC
** * *
16480814 GATCTTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCAACGATGGTGCCCCGAT
583 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC---G--G------CGATGGTGCCCCGAC
* * * * * *
16480879 GAAGAAAAATGCGGCACCAGCACATGCCCTAGTCCAGCATGTGCTGTCGCAACTCTCGGTCTGAT
637 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCG-T
* *
16480944 CCGATCTTAGACTGGGAATGAACTCAGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
701 TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* ** * * * ** *
16481009 AACACGTGAAACGAGTGTGCGGGTGCTCAGTCGGCCAGAGGGGCGGGATGTACTAGCCGGGGATC
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * * * * ** **
16481074 AGCCGGGTCCCCCTCTGCGTGCTG-CTGATCTTGCTGCCACAACACTCGATCTAATCCAAT
831 GGTCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* *
16481134 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACG-AA--ACGA---------GCAGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * *
16481187 CGGGTACTACGTCGGCCAGAGAGACTGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16481252 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAAGGCTTGTATATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
16481317 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCCATTTTTCACGATTTTCG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * *
16481382 AAACTTTTTGCGGTTTAGGATTTTTTAAAA-TTTTTCGGAAGGA-TTTAT-GCTCCAAAATTGGG
261 AAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTT-TGGCCCCAAACTTGGT
* * *
16481444 AGACGTGATCTTTGTGTTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * *
16481509 AGATTTTGTAACCATTTTAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTACTACTGGCAGC
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG---GCTACTGGCAGC
16481574 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
452 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
** * * * * *
16481639 GGGCCAATATAAGGGTGAAGTGCCAGCACCTATTGCACATCATGTGCG-TA-------GACCCCC
517 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGACACCCCCCGGCCCCCC
* * * *
16481696 CGATCGTCGGAACCCCAATACCACCGGTCAGGTTATCCGATGATGCTCCGACAATGGTGCCCCGA
582 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC---G--G---CG---ATGGTGCCCCGA
* * * * * *
16481761 -GAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCTGG
636 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATC-CG
* * * *
16481825 TCCGATCTTAGACTGGGTATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTTTGCCTAAGT
700 TTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * ** * ** *
16481890 TAACCCACGTAACGAGCGTGCGGACGCAC-GTTGGCCAGAAGGG-GGGATAAGCAAGTCGGGGAT
765 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * ** *
16481953 CGATCGGGTCCCTCACCACGTGCTGTCGAT-CTGGCTGCCGCAACCCTCAGTCTGGTCTGAT
830 CGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCT-GCTGCCGCAACCCTCGGTCTGGTCTGAT
* * ** * *
16482014 CTTATATTGGGAATGAACTCTATATGCCTAAGCCAACCGACGAAACGA-GTGGGCGGGCAGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACG-AGGCGGGCGGGCGG
* * *
16482078 GCGGGCACTACGCTGGCTAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16482143 TTTAGGCACATCTTCATATTTGTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCAAACAATG
130 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
16482208 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG-TTT-TATTTTTCACGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* ** * * * **
16482271 AAAACTTTTTACGGTTGGGGATTTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAAATTTT
260 GAAACTTTTTACGGTTCAGGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
16482336 TAGACGTGATCTTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
16482401 AAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGTACCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
16482466 ACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATAAGGGATAGGGG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * * *
16482531 GCTAATATAAGGGCCAAATAGCAGCACTCACCTCACATCATGTGCGCACACCCCCCTGGCCCCCC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACACCCCCC-GGCCCCCC
* * * * *
16482596 AGATCGTCGGAACCCCAATGCCGTCATTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCTCCGA
582 CGATCGCCGGAACCCCAATGCCG-C---C-GG---T-C-A-GGTTCTCCGGCGATGGTGCCCCGA
* * * * *
16482661 CGAAGAAAAATGCGGCAACAGAACATGCCCCAGCCCAGCATGTGCTGTCACAACCCT---T--G-
636 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGT
16482720 --G-TC-----C-------G-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
701 TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * * * *
16482766 CACCCACGAAACGAGCATACGGGCACTCAGTCAGCCAGAGGGGCAGGATGCACAAGCCAGGGATC
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * *** * * *
16482831 GATCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTATTGCAACCCTCGGTCCGTTC-AAT
831 GGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
** * *
16482890 CTTAGACTACGAATGAACTCCGTATGCGTAAGCCAACCGACGAAAC-A--A-GCGGGCGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * ** *
16482951 CGGGCACTATGCCGGCCAAAGAGACTAGATGCGCAAGCCGTGGATCGATGGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
***
16483016 TTAGGCACATCTTCATATTTCTATGGGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
*
16483081 TCCCTTAAGCCTTCACGTGAAG-TTCTATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
196 TCCCTTAAGCCTTCACGTGAAGTTTC-ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * *
16483145 GAAACTTTTTACGGTTC-GAGATTTTTTTAAAATTTTTTTGGAAGGGGTTTTGGCCCTAAACTTG
260 GAAACTTTTTACGGTTCAG-GA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
* * * *
16483209 GTAGACATGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTTTA
323 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * *
16483274 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACATTTTAATGGCTACTGGTAGCA
388 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
16483339 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
453 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
16483404 GGCCAATATAAGGGCCAAATACCAGCACTCATCGCACATCATGTGCGCACACCCCCCGGCCCTCC
518 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-ACACCCCCCGGCCCCCC
* * * * *
16483469 CGATCGCCGAAACCCCAATACTGTCGATCAGGTTCTCCGGCGATGCTCTGACGATGGTGCCCCGA
582 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCCGA
* * * * * *
16483534 CGAAGAAAAATGCGGCACTAGAAAATGCCCCAACCCAGCATGTGCTGTCGCAACCCT---T--G-
636 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGT
*
16483593 --G-TC-----C-------G-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTT
701 TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * *
16483639 AACCCACGAAACGAGCGTACGGGCACTCAACCGGCCAGAGGGGCGGGATGCGTAAGCCAGGGATC
766 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * *
16483704 GGTCGGGTCCCCCTCTGCGTGCTG-CTGATCCTGCTGTCGCAACCCTCGGTCTAGTTTGAT
831 GGTCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * *
16483764 CTTAGAATGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-A--A-GCGGACTGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
* * * * *
16483825 TGGGCACTATGCCGGCCAGAGGGACCGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
16483890 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
16483955 TCCCTT
196 TCCCTT
16483961 CAGCTAAAAA
Statistics
Matches: 15465, Mismatches: 1942, Indels: 1114
0.83 0.10 0.06
Matches are distributed among these distances:
843 38 0.00
844 155 0.01
845 154 0.01
846 5 0.00
847 5 0.00
848 3 0.00
850 111 0.01
851 154 0.01
852 115 0.01
853 11 0.00
854 5 0.00
855 12 0.00
856 99 0.01
857 99 0.01
858 4 0.00
859 7 0.00
860 172 0.01
861 5 0.00
862 12 0.00
863 6 0.00
864 8 0.00
865 5 0.00
866 3 0.00
867 4 0.00
868 13 0.00
869 12 0.00
870 10 0.00
871 6 0.00
872 172 0.01
873 251 0.02
874 494 0.03
875 208 0.01
876 676 0.04
877 151 0.01
878 405 0.03
879 64 0.00
880 324 0.02
881 448 0.03
882 330 0.02
883 62 0.00
884 7 0.00
885 5 0.00
886 8 0.00
887 7 0.00
888 102 0.01
889 363 0.02
890 543 0.04
891 386 0.02
892 869 0.06
893 1045 0.07
894 864 0.06
895 110 0.01
896 172 0.01
897 41 0.00
898 570 0.04
899 1109 0.07
900 903 0.06
901 1515 0.10
902 1069 0.07
903 59 0.00
904 437 0.03
905 235 0.02
906 113 0.01
907 96 0.01
908 8 0.00
909 1 0.00
910 3 0.00
911 7 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (890 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGAGGCGGGCGGGCGGG
CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
AAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGACACCCCCCGGCCCCCCCGAT
CGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGG
CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGTTCGATCTTAGACTGG
GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTC
TGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGAT
Found at i:16468548 original size:26 final size:26
Alignment explanation
Indices: 16468519--16468571 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16468509 CCGGTCTGAT
*
16468519 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16468545 CTTAGACTGGGAATGAACTGCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16468571 C
1 C
16468572 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16469455 original size:26 final size:26
Alignment explanation
Indices: 16469419--16469471 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16469409 CCCATTGAAT
*
16469419 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTACGTATG
16469445 CTTAGACTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
16469471 C
1 C
16469472 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:16470347 original size:26 final size:26
Alignment explanation
Indices: 16470310--16470362 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16470300 TCAGTCCGAT
16470310 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16470336 CTTAGA-TGGGGAATGAACTCCGTATG
1 CTTAGACT-GGGAATGAACTCCATATG
16470362 C
1 C
16470363 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16471171 original size:26 final size:26
Alignment explanation
Indices: 16471142--16471219 Score: 120
Period size: 26 Copynumber: 3.0 Consensus size: 26
16471132 CGGTCCAATT
16471142 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
* * *
16471168 TTAGGCTGGGAATTAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
*
16471194 TTAGACTAGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
16471220 CTAAGTCAAC
Statistics
Matches: 45, Mismatches: 7, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
26 45 1.00
ACGTcount: A:0.27, C:0.18, G:0.26, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:16471979 original size:25 final size:25
Alignment explanation
Indices: 16471934--16471984 Score: 68
Period size: 25 Copynumber: 2.0 Consensus size: 25
16471924 CGGAACCCCA
*
16471934 ATGCTGCCGGTCAGGTTCTCCGGTG
1 ATGCTGCCGGTCAGGTGCTCCGGTG
*
16471959 ATGCT-CCGGTGATGGTGCTCCGGTG
1 ATGCTGCCGGTCA-GGTGCTCCGGTG
16471984 A
1 A
16471985 AGAAAAATAC
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
24 6 0.26
25 17 0.74
ACGTcount: A:0.10, C:0.25, G:0.37, T:0.27
Consensus pattern (25 bp):
ATGCTGCCGGTCAGGTGCTCCGGTG
Found at i:16472934 original size:26 final size:26
Alignment explanation
Indices: 16472905--16472957 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16472895 CCAATCCGAT
16472905 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16472931 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16472957 C
1 C
16472958 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16476487 original size:25 final size:25
Alignment explanation
Indices: 16476459--16476509 Score: 93
Period size: 25 Copynumber: 2.0 Consensus size: 25
16476449 CCGGTTCGAT
*
16476459 CTTAGACTGGGAAGAACTCCGTATG
1 CTTAGACTGGGAAAAACTCCGTATG
16476484 CTTAGACTGGGAAAAACTCCGTATG
1 CTTAGACTGGGAAAAACTCCGTATG
16476509 C
1 C
16476510 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
25 25 1.00
ACGTcount: A:0.29, C:0.22, G:0.25, T:0.24
Consensus pattern (25 bp):
CTTAGACTGGGAAAAACTCCGTATG
Found at i:16477409 original size:26 final size:25
Alignment explanation
Indices: 16477359--16477410 Score: 77
Period size: 25 Copynumber: 2.0 Consensus size: 25
16477349 CCGGTCTGAT
*
16477359 CTTAGACTGGGAAGAACTCTATATG
1 CTTAGACTGGGAAGAACTCCATATG
*
16477384 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAA-GAACTCCATATG
16477410 C
1 C
16477411 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 13 0.54
26 11 0.46
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (25 bp):
CTTAGACTGGGAAGAACTCCATATG
Found at i:16479181 original size:26 final size:26
Alignment explanation
Indices: 16479152--16479204 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16479142 CCGGTTTGAT
16479152 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* * *
16479178 CTTAGATTGGGATTGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16479204 C
1 C
16479205 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.17, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16480074 original size:26 final size:26
Alignment explanation
Indices: 16480045--16480095 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16480035 CCGGTCTGAT
*
16480045 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16480071 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16480096 ACCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.20, G:0.24, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16480985 original size:26 final size:26
Alignment explanation
Indices: 16480949--16481001 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16480939 CTGATCCGAT
16480949 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
*
16480975 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
16481001 C
1 C
16481002 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCAGTATG
Found at i:16482111 original size:892 final size:894
Alignment explanation
Indices: 16472464--16483960 Score: 13538
Period size: 894 Copynumber: 12.9 Consensus size: 894
16472454 TATTTTTCAT
* * * * *
16472464 GATTTTTGAAACTTTTTTTGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTG-GCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * * *
16472529 TGGTTGGTATGCATAAAAAAATTCAGCTAAAAACTCTAACTGTACAAGATTTTGTGACCATTTGA
65 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
16472594 AAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * *
16472659 TCTTTAAAGCGGTGTGAGTTATCGAGGTATGATGAGGGATAGGGGGCCAAGATAAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
16472724 CCAGCACCCATCACACATCAAGTGCACACACCGCCCCGGCCCCCCTGATCGTCGAAACCCTAATG
260 CCAGCACCCATCGCACATCATGTG-------CGCCACGACCCCCC-GATCGTCGGAACCCCAATG
* * * * * * * *
16472789 CCGTCGGTCAGGTTCTCC-AGTGATGCTTCGACGATGGTGCCCTGATGAAGAGAATTGTGACACC
317 CCGCCGGTCAGGTTCTCCGA-TGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* * **
16472853 AGCACATGCCCGAGCCCAGCATGTTCTACTGCAACCCTCGGTCCAATCCGATCTTAGACTGGGAA
381 AGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG-A
*
16472918 TGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
445 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * *
16472983 GCGGG-CGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTG
510 GCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTG
* ** **
16473047 CATGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCG
575 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * **
16473112 TATGCCTAAGCGAACCGACAAAACGAGCGGGCGGGCGGGCGCGCTGGCACTACATCGGCCAGAGA
640 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGA
*
16473177 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGCTTA-GCACATCTTCATATTTCT
704 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*
16473241 GCATGCCAAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTACACGTGAA
769 GCATGCC-AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* * * * *
16473306 GTTTTAT-GCAAGATGACTCGTTTTCTATTTTTCACAATTTTTGAAACATTTTGCGG-TTCTG
833 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTC-G
* * * *
16473367 GATTTTTT-AAATTTTTTTGGAAGGA-TTTCTAGCCCCAAACTTGGTAGACATGATCATTGTATT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTT-T-GGCCCAAACTTGGTAGACGTGATCCTTGTATT
* * *
16473430 TTTGTTGGCATGCATAAAAAAATTCAGCCAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG
64 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
16473495 AAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCAAACCTGTAAAATCTCAAATG
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
16473560 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATGGGGGGCCAATATAAGGGCCAAGT
194 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * * *
16473625 ACGAGGACCCATCACACATCATGTGCGCACACCCCCCCGGCCACCCCGATTGTCAGAACCCCAAT
259 ACCAGCACCCATCGCACATCATGTGCGC-CA------CGACC-CCCCGATCGTCGGAACCCCAAT
* * ** ** * * *
16473690 ACCGTCGGTCAGGTTCTCCGGCGATATTTCGACGATGGTGCCCCGGCAAAGAAAAATGCGGCACC
316 GCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* *
16473755 AACACATGCCCGAGCCCAGCATGTGCTGCCGCAA----C---CC--T-CGATC-----C---G--
381 AGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAT
*
16473800 G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTG
446 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * **
16473860 CAGG-CGCTCAACCGGCTAGAGGGGCGGGATGCGTAAGCCGAGGATCGATCGAGTCCCCCTCTAT
511 CGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGC
* *
16473924 GTGCTACCGATCCTGCTGTCGCAACCCTCGGTCT-GATCTGATCTTAGACTGGGAATGAACTCCG
576 GTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAG-TCTGATCTTAGACTGGGAATGAACTCCG
* *
16473988 TATGCCTAAGCCAACCGACGAATCGAGCGGGCGGGCGGGCGGGCGGGTGTGCATTACGCCGGCCA
640 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-GGCGGGC--G-G-GCACTACGCCGGCCA
* *
16474053 GACAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
700 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*** *
16474118 TTCTATGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCACGT
765 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * * * *
16474183 GAAGTTTTATGGCAAGACGACTCATTTTCTTTTTTTCACAATTTTTGAAACTTTTTATGG-TTCG
830 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
* **
16474247 AGATTTTTTAAAATTTTTTTGGAAGGAGTTTTAACCCCAAACTTGGTAGACGTGATCGC-TGTAT
1 -GATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GGCCCAAACTTGGTAGACGTGATC-CTTGTAT
* * *
16474311 TTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAATATTTTGTGACCATTT
63 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
*
16474376 GAAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACT-GCAAGCAAACCTGTAAAATCTCAAA
128 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAA
*
16474440 TGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAA
192 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
*
16474504 GTACCAGAACCCATCGCACATCATGTGCGCACACCCCCG-CGGCCACCCTGATCGTCGGAACCCC
257 GTACCAGCACCCATCGCACATCATGTGCGC-CA----CGAC--CC-CCC-GATCGTCGGAACCCC
* * * *
16474568 AATACCGCCGATCAGGTTCT-CTAGTG-TGCTCCGACGATGGTGCCCCGACGAAGAAAAAGGCGG
313 AATGCCGCCGGTCAGGTTCTCCGA-TGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG
* * * * *
16474631 CACCAACACATGCCTCTAGCCCAGCATGTGCTGCCGTAA----C---CC--T-CAATC-----C-
377 CACCAGCACATGCC-CGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACT
*
16474680 -GG-T---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGAAACGA
441 GGGATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * *
16474736 GCGTGCAGG-CGCTCAGCCGGCCAGAGGGGTGGGATGTGCAAGCCGGGGATCGATCGAGTCCCCC
506 GCGTGCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCC
* * * ** *
16474800 TTTGCGTGCTACCGATCCTGCTGCCGTAACCCTCGGTCT-GATCCAATCTTAGACTGGGAAAGAA
571 TCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAG-TCTGATCTTAGACTGGGAATGAA
* * * * * *
16474864 CTTCGTATGCCTAAGCCAAACGACGAAACGAGCGGGCGGGCCGGC-AGTGGGTATTACGCCGGCC
635 CTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG-CGGCGGGCGGGCACTACGCCGGCC
* * *
16474928 AGACAGACAGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
699 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
16474993 TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
764 TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
* *
16475058 TGAAGTTTCGTGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTC
829 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTC
16475122 GG
894 -G
** *
16475124 GATTTTTTAAAATTTTTTCTTAAGGAGTTTTGGCCCAAAACTTGGTAGATGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC-AAACTTGGTAGACGTGATCCTTGTATTT
* * * *
16475189 TTTTTGCCATGCACAAACAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
65 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
16475254 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
16475319 TCTTTAAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGGGCCAAGT
195 TCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * *
16475384 ACCAGCACCCATCGTACATCAAGTGCGCACTCCTACCTCGGCCCCCCCGATCGCCGGAACCCCAA
259 ACCAGCACCCATCGCACATCATGTGCG----CC-A---C-GACCCCCCGATCGTCGGAACCCCAA
* * * * * * * * *
16475449 TACTGCCAGTCAGGTTCTCCGACGATACTCCGACGGTGGTACCCCGGCGAAGAAAAATGCGGCCC
315 TGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * *
16475514 CAGCACATGCCTGAGCCCAGCAAT-TGCTGCTGCAACCCTCGATCTGGTCGGATCTTAGACTAAG
380 CAGCACATGCCCGAGCCCAGC-ATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACT-GG
* *
16475578 AATGAACTCCGTATGCTTAGACTGGGAGTGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
443 GATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * * ** * *
16475643 GTACAGG-CGCTCAACCGGCTAGAGGGGCGGGATGCGCAAGTCTGGGATCGGCCGCGTCCACCTC
508 GTGCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTC
* * * * *
16475707 TGCGTGCTGTCGATCCTACTGCCGCAACCCTTGGTCCT-GTCTGATCTTACATTGGGAATGAACT
573 TGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGT-CTAGTCTGATCTTAGACTGGGAATGAACT
* *
16475771 CCGTATGCCTAAGCCAACCGAC-AAA--A-CGAGC--G-GGCGGGCGGGCACTATGCCGGCCA-A
637 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGA
* *
16475828 CGAGACGGGATGCGCAAGCCGTGTATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATT
702 -GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
16475893 TTTGCATGCCAATGCCATTTTTATGGCTTGT-AATTGCATACAACGGTCCCTTAAGCCTTCACGT
766 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT-CATACAATGGTCCCTTAAGCCTTCACGT
*
16475957 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA-GGGTTCG
830 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTC-
16476021 G
894 G
* ** *
16476022 GA-TTTTTAAAATTTTTT-GGAAGGAGTTTT-GCCTGAAACTTTTTTAGATGTGATCCTTGTATT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC-CAAAC-TTGGTAGACGTGATCCTTGTATT
**
16476084 TTTGTTCCCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
64 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
16476149 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATG
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * * *
16476214 CACTTTAAGGGGGTGAGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAAGT
194 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * ** * * * *
16476279 AGCAGCACCCATCGCACATAATATGCGCACACCCCCCCGGCCCCCTATCGCCGGAACCCCAAAGT
259 ACCAGCACCCATCGCACATCATGTGCGC-CA---CGAC--CCCCCGATCGTCGGAACCCCAATGC
** * * * *
16476344 CATCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGACACCAG
318 CGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
* * * *
16476409 CACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTAGACTGGGAAGA
383 CACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGATGA
* *
16476474 ACTCCGTATGCTTAGACTGGGAA-AAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCG
448 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * **
16476538 GGA-GCTCAGCCGGCCAGAAGGGCAGGATGCGCAAGCCAGGGATC-AACTGGGTCCCCCTCTATG
513 GGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCG
* * * * * *** * *
16476601 TACTGTCGAACCTACTACCGCAACCCTTAATCCAGTCTGATCTTAGATTGGGAATGAACTCCGTA
577 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
16476666 TGCCTAAGCCAATCGACGAATCGAACGGGCGGGCGGTCAGGCGGGCACTATGCCGGCCAGAGAGA
642 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG-CGGGCGGGCACTACGCCGGCCAGAGAGA
* * * * * *
16476731 CGGGATGCACACGCCGTGGATCGATAGGTTGGTAGGTGCGTTTAGGCACATCATCATATTTCTAC
706 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
16476796 ATGCCAATGCCATTTTTCTTGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
771 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * *
16476861 TCACGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCAG-TTCAG
836 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTC-G
* * *
16476920 GATTTTTTAAAATTTTTTCAGAAGTAATTTT-GCCTCTAAACTTGGTAGACGTGATCCTTGTATT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC-C-AAACTTGGTAGACGTGATCCTTGTATT
*
16476984 TTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
64 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
16477049 AAAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATG
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * * * * * *
16477114 CTCTATATGGGGGTGCGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCGAATATATGGGCCAAGT
194 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * **
16477179 ACCAGCACCCACCGCACATCATGTGCGCAAACCCCCTGCCCCCCCGATCACCGGAACCCCAATGC
259 ACCAGCACCCATCGCACATCATGTGCG-----CCAC-GACCCCCCGATCGTCGGAACCCCAATGC
* * * *
16477244 CGCCGGTCAGGTTCTCTGATGATGCTCC-AGTGATGGTGCCCCGACGAAGAAAAATGTGGCCCCA
318 CGCCGGTCAGGTTCTCCGATGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * * *
16477308 GCATATGCCCGAGCCCAGCATGTGCTG-TCGTAACCCTTGGTCCGGTCTGATCTTAGACTGGGAA
382 GCACATGCCCGAGCCCAGCATGTGCTGCT-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAT
** * *
16477372 GAACTCTATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATG
446 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * *
16477437 CGGGA-GTTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC-AACTGAGTCCCCCTCTA
511 CGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTG
* * * *** * **
16477500 TGTGCTGCCGATCCTACTACCGCAACCCTTAATCCAGTCTGATCTTAGACTGAAAATGAACTCCG
575 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCG
* * *
16477565 TATGCCTAAGCCAACCGACGAATCAAGCGGGCGGGCGGTCGGGCGGGCACTACGTCGGCCAGAGA
640 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG-CGGGCGGGCACTACGCCGGCCAGAGA
* * * * * * *
16477630 AACGGGATGCACACGCCATGGAGCGATAGGTTGGTAGGTGGGTTTAGGCACATCGTCATATTTCT
704 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*
16477695 GCATGCCAATGCCATTTTTATTGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
769 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* *
16477760 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA-TTTTTGCGG-TTCG
834 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
* * * * *
16477819 GATTTTTTAAAATTTTTTCGAAAGTAATTTTGGCTCTAAACTTTGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC-CCAAACTTGGTAGACGTGATCCTTGTATTT
*
16477884 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
65 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
16477949 AAAAAGTGTCCCCATTTCACACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
**
16478014 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGTGAATATAAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
16478079 CCAGCACCCAT-GCACATCATGTGCGCACACCCCCTGACCCCCCCGATCATCAGAACCCCAATGC
260 CCAGCACCCATCGCACATCATGTGCGC-CA----C-GA-CCCCCCGATCGTCGGAACCCCAATGC
* * ** *
16478143 TGCCGATCAGGTTCTCCGATGATGCTCCGGTGATGGTGCACCGACGAAGAAAAATGCGGCACCAG
318 CGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
* ** *
16478208 CATATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCTC-ATTTTAGACTGGGAAT
383 CACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTC-CGATCTTAGACTGGG-AT
* * * * *
16478272 GAACTTCGTATGCTTAGACTGGGAATGAACTCCGTCTGCCTAAGTCAACACATGAAACGAGTGTG
446 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * *
16478337 CGGG-CGCTCAGCCAGCCAGAGGGGCGGGATGCACAAGCCGAGGATCTG-TCGGGTCCCCCTCGG
511 CGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GATCGGGTCCCCCTCTG
* * ** *
16478400 TGTGCT-CTCGATCCTTCTATCGCAACCCTTGGTCTAGTCTGATCTTAGACTGGGAATGAACTCC
575 CGTGCTGC-CGATCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCC
* * * * * *
16478464 ATATGCCTAAACCAACCGACGAAACGA----GC--G-GGTGAGCGGGCACTACGTCGTCCAGAGA
639 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGA
* * * * *
16478522 GACGGGATGCGCAAGCCGTAGATCGATATGGTGGCAGCTGGGTTTAGGCACATCTTCATCTTTCT
704 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
**
16478587 GTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
769 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * *
16478652 TTTCATGGGAAGACGACTCGTTTTCTATGTTTCATGATTTTTGAAACTTTTTACGGTTTGG
834 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
* ** *
16478713 GATGTTTTAAAATTTTTTCGGGGGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
16478778 TTATTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
65 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
16478843 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* ** * *
16478908 TCTTTAAGAGACTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCCATATAAGGG-CAAGTG
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
16478972 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGCCGGAACCCCAATGC
260 CCAGCACCCATCGCACATCATGTGCGC-CA-----CGACCCCCC-GATCGTCGGAACCCCAATGC
* * *
16479037 CGCTGGTCAGGTTCTCC-AGCGATGCTCCGACGATGGTGCCCC-AGCTAAGAAAAATGCGGCACC
318 CGCCGGTCAGGTTCTCCGA-TGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACC
* * **
16479100 -GACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTTTGATCTTAGACTGGGA
381 AG-CACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG-
* * *
16479164 ATGAACTCCGTATGCTTAGATTGGGATTGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCG
444 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * ** *
16479229 TGCGGG-CACTCAGCCGGCCTGAGGGGCTGGATGCGCAA-CTCGGGGGTCGGCCGGGTCACCCTC
509 TGCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC-CGGGGATCGATCGGGTCCCCCTC
* * * * * * ** *
16479292 TACGTGCTACCGATCCAGCTACCGCAACACTCGGTCTGGTCCAATCTTATACTGGGAATGAACTC
573 TGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTC
* * * * * * * * *
16479357 CGTCTGCCTAAGCCAACTGACGAAATGA----AC---AGGCGGGCAGGCTCTATGCCGGCTAGAG
638 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAG
* * * *
16479415 AGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAAGATCTTCCTATTTC
703 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * *
16479480 TACATGCCAATGCCATTTTTATGGCTTGTAGATTCATACAATGGTCCCTTAAGCCGTCACGTGAA
768 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* *
16479545 GTCTT-ATGGCAAGACGACTCATTTTCTATTTTTCTCGATTTTTGAAACTTTTTACGG-TTCG
833 GT-TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
* ** * *
16479606 AGAGTTTTTAAAATTTTTTCAAAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCATGTATT
1 -GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATT
* *
16479671 TTTTTTGGCATGCAC-AAAAAATTCAGCT-AAAACTCGAAGTGTACAAGATTTTGTGATCATTTG
64 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
16479734 AAAAAAGTGT-CCCATTTCAAACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATG
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* **
16479798 CTCTTTAAAGGGGTGTTTGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
194 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * * *
16479863 ACCACCACCCATCGCACATCACGTGCGAACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAAT
259 ACCAGCACCCATCGCACATCATGTGCG-------CCAC-GACCCCCCGATCGTCGGAACCCCAAT
* * * * * ** * *
16479928 GCCACCGTTCAGGTTCTTCGGTGATGCTCCGACGATGGTGCCTCGGTGAAGAAAAATGTGGCACT
316 GCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* * * * * * *
16479993 AGCACATACCCAAGCCCAGCATGTACTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTTGGAA
381 AGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGAC-TGGGA
* *
16480058 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGG
445 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * **
16480123 GCGGG-CGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTCTG
510 GCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTG
** * * * ** * *
16480187 CGTGCTGTTGATCCTACTACCGCAACCTTC-CACTCAGTCTGATCTGAGACTGGAAATGAACTCC
575 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCT-AGTCTGATCTTAGACTGGGAATGAACTCC
* * * * * *
16480251 GTAAGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTGGACGGGTGGGTACTACGTCGACCAGAG
639 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG-CGGGCGGGCACTACGCCGGCCAGAG
16480316 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
703 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
** * ** *
16480381 TGTGTGCCCATGCCATTTTTATTTCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCACGTGAA
768 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* * **
16480446 GTTTAATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGG-TTCAG
833 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTC-G
* * ** *
16480508 GATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCAAAAAACATGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC-CCAAACTTGGTAGACGTGATCCTTGTATTT
*
16480573 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGA
65 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
16480638 AAAAAGTGTCCCCATTTCAGACTCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
16480703 TCTTTAAGGGGGTGTGTGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAGGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
16480768 CTAGCACCCATCACACATCTTGTGCGCAGACCCCCCCGACCCCCCCGATCTTCGAAACCCCAATG
260 CCAGCACCCATCGCACATCATGT--GC-G----CCACGA-CCCCCCGATCGTCGGAACCCCAATG
* * *
16480833 CCGCCGGTCAGGTTCTCCGGTGATGCTCCAACGATGGTGCCCCGATGAAGAAAAATGCGGCACCA
317 CCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * * *
16480898 GCACATGCCCTAGTCCAGCATGTGCTG-TCGCAACTCTCGGTCTGATCCGATCTTAGACTGGGAA
382 GCACATGCCCGAGCCCAGCATGTGCTGCT-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGG-A
* * ** *
16480962 TGAACTCAGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACGTGAAACGAGTGT
445 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * ** * *
16481027 GCGGG-TGCTCAGTCGGCCAGAGGGGCGGGATGTACTAGCCGGGGATC-AGCCGGGTCCCCCTCT
510 GCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCT
* * * * * * **
16481090 GCGTGCTGCTGATCTTGCTGCCACAACACTCGATCTAATCCAATCTTAGACTGGGAATGAACTCC
574 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCC
* * * *
16481155 GTATGCCTAAGCCAACTGACGAAACGA-----------GCAGGCGGGTACTACGTCGGCCAGAGA
639 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGA
*
16481209 GACTGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
704 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
16481274 GCATGCCAATGCCATTTTTAAGGCTTGTATATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
769 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * *
16481339 TTTCATGGCAAGACGACTCGTTTTCCATTTTTCACGATTTTCGAAACTTTTTGCGGTTTAG
834 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
* * * *
16481400 GATTTTTTAAAA-TTTTTCGGAAGGA-TTTAT-GCTCCAAAATTGGGAGACGTGATCTTTGTGTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTT-TGGC-CCAAACTTGGTAGACGTGATCCTTGTATT
* * *
16481462 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTAACCATTTT
64 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
16481527 AAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTACTACTGGCAGCAAACCTGTAAAATCTCAA
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATG---GCTACTGGCAGCAAACCTGTAAAATCTCAA
**
16481592 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGTGA
191 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * * * * *
16481657 AGTGCCAGCACCTATTGCACATCATGTGCG-TA-GACCCCCCGATCGTCGGAACCCCAATACCAC
256 AGTACCAGCACCCATCGCACATCATGTGCGCCACGACCCCCCGATCGTCGGAACCCCAATGCCGC
* * * *
16481720 CGGTCAGGTTATCCGATGATGCTCCGACAATGGTGCCCCGA-GAAGAAAAATACGGCACCAACAC
321 CGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* *
16481784 ATGCCCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGTATGAAC
386 ATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG-ATGAAC
* * * *
16481849 TCCATATGCTTAGACTGGGAATGAACTCCGTTTGCCTAAGTTAACCCACGTAACGAGCGTGC-GG
450 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* ** * ** * * * **
16481913 ACGCAC-GTTGGCCAGAAGGG-GGGATAAGCAAGTCGGGGATCGATCGGGTCCCTCACCACGTGC
515 ACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
* * * * * **
16481976 TGTCGAT-CTGGCTGCCGCAACCCTCAGTCTGGTCTGATCTTATATTGGGAATGAACTCTATATG
580 TGCCGATCCT-GCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16482040 CCTAAGCCAACCGACGAAACGAGTGGGCGGGCAGGCGGGCGGGCACTACGCTGGCTAGAGAGGCG
644 CCTAAGCCAACCGACGAAACGAGCGGGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* * *
16482105 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTGTACGT
708 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
*
16482170 GCCAATGCCATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
773 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* **
16482235 ATGGCAAGACGACTCG-TTT-TATTTTTCACGATTTTTAAAACTTTTTACGGTTGGG
838 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
* * ** *
16482290 GATTTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAAATTTTTAGACGTGATCTTTGTATT
1 GA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC-AAACTTGGTAGACGTGATCCTTGTATT
*
16482355 TTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
64 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * *
16482420 AAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGTACCAAACCTGTAAAATCTTAAATG
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * * *
16482485 CTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATAAGGGATAGGGGGCTAATATAAGGGCCAAAT
194 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * *
16482550 AGCAGCACTCACCTCACATCATGTGCGCACACCCCCCTGGCCCCCCAGATCGTCGGAACCCCAAT
259 ACCAGCACCCATCGCACATCATGTGCGC-CA-----C-GACCCCCC-GATCGTCGGAACCCCAAT
* ** * * * *
16482615 GCCGTCATTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCTCCGACGAAGAAAAATGCGGCAAC
316 GCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* * *
16482680 AGAACATGCCCCAGCCCAGCATGTGCTG-TCACAACCCT---T---G---G-TC-----C-----
381 AGCACATGCCCGAGCCCAGCATGTGCTGCT-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGA
* *
16482724 -G-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCCACCCACGAAACGAGCAT
445 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * * * *
16482784 ACGGG-CACTCAGTCAGCCAGAGGGGCAGGATGCACAAGCCAGGGATCGATCGGGTCCCCCTCTG
510 GCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTG
* *** * * **
16482848 CATGCTGCCGATCCTGCTATTGCAACCCTCGGTC-CGT-TCAATCTTAGACTACGAATGAACTCC
575 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTCT-GATCTTAGACTGGGAATGAACTCC
* * * * *
16482911 GTATGCGTAAGCCAACCGACGAAACAAGCGGGC--G-GACGGGCGGGCACTATGCCGGCCAAAGA
639 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGA
** *
16482973 GACTAGATGCGCAAGCCGTGGATCGATGGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
704 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
16483038 --ATGGGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
769 GCAT--GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
*
16483101 AG-TTCTATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TTCG
832 AGTTTC-ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
* * *
16483163 AGATTTTTTTAAAATTTTTTTGGAAGGGGTTTTGGCCCTAAACTTGGTAGACATGATCCTTGTAT
1 -GA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC-AAACTTGGTAGACGTGATCCTTGTAT
* * *
16483228 TTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTTTACAAGATTTTGTGACCATTT
63 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * *
16483293 GAAAAAAGTGTCCTCATTTCAGACATTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAAT
128 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
*
16483358 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAA
193 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * *
16483423 TACCAGCACTCATCGCACATCATGTGCGCACACCCCCCGGCCCTCCCGATCGCCGAAACCCCAAT
258 TACCAGCACCCATCGCACATCATGTGCGC-CA-----CGACCC-CCCGATCGTCGGAACCCCAAT
* * * * ** * *
16483488 ACTGTCGATCAGGTTCTCCGGCGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACT
316 GCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* * * *
16483553 AGAAAATGCCCCAACCCAGCATGTGCTG-TCGCAACCCT---T---G---G-TC-----C-----
381 AGCACATGCCCGAGCCCAGCATGTGCTGCT-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGA
*
16483597 -G-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGT
445 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * * *
16483657 ACGGG-CACTCAACCGGCCAGAGGGGCGGGATGCGTAAGCCAGGGATCGGTCGGGTCCCCCTCTG
510 GCGGGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTG
* * * *
16483721 CGTGCTGCTGATCCTGCTGTCGCAACCCTCGGTCTAGTTTGATCTTAGAATGGGAATGAACTCCG
575 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * * *
16483786 TATGCCTAAGCCAACCGACGAAACAAGCGGAC---TGGCGGGTGGGCACTATGCCGGCCAGAGGG
640 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAG
* *
16483848 ACCGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
705 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
16483913 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
770 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
16483961 CAGCTAAAAA
Statistics
Matches: 9313, Mismatches: 1045, Indels: 501
0.86 0.10 0.05
Matches are distributed among these distances:
870 1 0.00
871 3 0.00
872 159 0.02
873 266 0.03
874 494 0.05
875 58 0.01
876 639 0.07
877 64 0.01
878 87 0.01
879 59 0.01
880 323 0.03
881 447 0.05
882 317 0.03
883 69 0.01
884 3 0.00
886 2 0.00
887 1 0.00
888 1 0.00
889 5 0.00
890 421 0.05
891 168 0.02
892 774 0.08
893 592 0.06
894 832 0.09
895 99 0.01
896 165 0.02
897 29 0.00
898 406 0.04
899 416 0.04
900 653 0.07
901 699 0.08
902 364 0.04
903 60 0.01
904 458 0.05
905 173 0.02
906 5 0.00
907 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (894 bp):
GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTT
TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
CAGCACCCATCGCACATCATGTGCGCCACGACCCCCCGATCGTCGGAACCCCAATGCCGCCGGTC
AGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
CGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGATGAACTCCGTA
TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGACGCTC
AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGA
TCCTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
CAACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCG
Found at i:16487716 original size:26 final size:26
Alignment explanation
Indices: 16487687--16487739 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16487677 CCGGTCTGAT
16487687 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16487713 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16487739 C
1 C
16487740 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16489526 original size:877 final size:872
Alignment explanation
Indices: 16485231--16493711 Score: 9864
Period size: 877 Copynumber: 9.6 Consensus size: 872
16485221 ACTCCGCATG
* * * *
16485231 CTTAGACTGGGAATGAACTCTGTATGCCGAAGTCAACCGACGAAACGA--------GCGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* *
16485288 CGGGCATTACAT-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTCGGTGGG
66 CGGGCACTAC-TCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16485352 TTTAGGTACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
**
16485417 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * **
16485482 GAAACTTCTTACGGTTTGGGATTTTTTAAAACTTTTTT-GGAAGGAGTTTTACCCCCAAACTTGG
260 GAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
*
16485546 TAGACGTGATCCTTGTATTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* ** * *
16485611 AATATTTTGTGATGATTTGAAAAAAGTATCCCCATTTCAGACACTTTAGTGGCTACTGGCAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
16485676 ACCTGTAAAATCTCAAATGTTGTTTAAGGGGTTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
16485741 GCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCAAC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC-CC
* * * *
16485806 CGATCGCCGGAACTCTAATGTCGTCGGTCAGGTTCTTCGACGATGCTCCGGCGATGGTGCCCCGA
583 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC-T---CGA-GCTCCGGCGATGGTGCCCCGA
* * **
16485871 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAACATGTGCTACTGCAACCCTCAGTTCGG
643 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C---TCGG
** **
16485936 TCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTTGTGCGCCTAAGT
703 TC----C---------G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* ** * *
16486001 CAACCCATGAAACGAGCGTATGGGAGCTCAGCCGGCCAGAGGGGCGGGATGCCCAAGCTGGGGAT
747 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGAT
* * * * * *
16486066 CGATCGGGTCCCCCTCTACGTGCTGTCGATCCTACTACTGCAACCCTC-GATTTGGTCCAAT
812 CGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACTGCAACCCTCAG-TCTCGTCCGAT
** * *
16486127 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC-AAAAAATGAGCGGGCGGACGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * *
16486191 CGGGCACTACGT-CGGCCAGAGAGATGGGATGCGTAAGCCGTGGATCAATAGGGTGGTAGGTGGG
66 CGGGCACTAC-TCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * * *
16486255 TTTAGGTACATCTTTAAATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATA
130 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
16486320 GTCTCTTAAGCCTTTACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTACACGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * ** * * *
16486385 GAAACTTTTTACGGTTCGAGATTTTTTAATATTTTTTCAAAATGAGTTTCGGCCCCAAACTTGCT
260 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
16486450 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * *
16486515 AGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACATTAATGGCTACTGGTAGCAAA
390 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
16486580 CCTATAAAATCTCAAATGCTCTTTAAGGGGG-GTGAGTTCTCGAGGTTTGATGAGCGATAGGGGG
455 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
16486644 CCAAAATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACCCCCTCGGCCCCCT
520 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCCGGCCCCC-
* * * * *
16486709 CGATCGTCGGAACCCCAATGCTGCCAGTCAGGTTCT----CT--GGCGATAGTGCCCCGATGAAG
583 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCGAGCTCCGGCGATGGTGCCCCGACGAAG
* *
16486768 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGATCCGGTCTGA
648 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGA
* **
16486833 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACTAAACGAGCGTGCGGGCTTTCAG
713 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* ** ** ** * *
16486898 CCGGCCAGTGGGGCGGGATGCGCAAGCCAGCTATCGACCGGGTCCCCTTCTGTGTGCTGTCGATC
778 CCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* *
16486963 CTGCTACTGCAACCCTTAGTC-CGATCCAAT
843 CTGCTACTGCAACCCTCAGTCTCG-TCCGAT
* *
16486993 CTTAGAGTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA--------GCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * * * *
16487050 CAGGCACTACGCCGGCCAGAGGGACCGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16487115 TTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
16487180 TCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * * *
16487245 AAACTTTTTACGGTTCTGGATTTTTTTAAATTTTTTCGGAAGGA-ATTTCGACCAAAACTTGGTA
261 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
*
16487309 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACCTCGAAGTGTACAA
326 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
16487374 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
391 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * *
16487439 CTATAAAATCTCAAATGCTTTTTAA-AGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
456 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * *
16487503 CAATATAAGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGTACACCCCCCAGCCCCCCCGA
521 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGA
* * ** *
16487568 TCGTCGGAACCCCAATGCCGCCGGTCAGGTT-T-----TTC-G-G-TAATGCTCCGACGAAGAAA
586 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCGAGCTCCGGCGATGGTGCCCCGACGAAGAAA
* * * * * *
16487624 AATACGACACCAGCACATGCCCGAGCCCAACATGTGCTGTCGCAACCATTGGTCCGGTCTGATCT
651 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-C-C-A-CA----ACC-CTC-GGTC-
*
16487689 TAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
705 ----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* ** * * *
16487754 AAAATTAGCGTACGGGCGCTTAGCCGGCCAGAGGGGCGGGATACGCAAG-TCGGGGATCGGTCGG
755 GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGG
* * ** * * * *
16487818 GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTTAGTTTGGTCTGAT
819 GTCCCCCTCTGCGTGCTGTCGATCCTGCTACTGCAACCCTCAGTCTCGTCCGAT
* * * * *
16487872 CTTAGACTAGGTATGAACTCCGTATGCCTAAGCCAACCAATGAAACGAGCGGG-GAGGCGGACGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG-GGCGGGCGG
* * * *
16487936 GCGGGCACTACAT-CGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGAGTTGTAGGTGT
65 GCGGGCACTAC-TCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
16488000 GTTTAGGCACATCTTCATGTTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
129 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
16488065 GGTCCCCTAAGCTTTCACGTGAAGTTTCATAGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
194 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * * * **
16488130 TGAAACCTTTTGCGGTTGGGGA-TTTTTAAAATTTCTTCGAAAAAAGTTTTGGCCCCAAACTTGG
259 TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * *
16488194 TAGAAGTGATCCTTGCATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* **
16488259 AAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC-ACTTACAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
16488323 ACCTGT-AAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCTAGGTTTGATGAGGGATAGGGG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
*
16488387 GCCAGTATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTCGGCCCCC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CGG-CCCC
* * * *
16488452 CCGATCACCGGAACCCTAATGCCGCTGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCG
582 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C---GA-GCTCCGGCGATGGTGCCCCG
* * * * * *
16488517 GCAAAGAAAAATGTGGCACCAACACATGCCCGAGCCAAGCATGTGCTGCCACAACCCTCGGTCCA
642 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCG
* *
16488582 GTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGC
707 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* *
16488647 GCTCAGTCGGCCAGAGGGGCGGGATGCACAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTG
772 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTG
* * *
16488712 CCGATCCTGCTACTGCAACCCTCGGTCTAGTCCGAT
837 TCGATCCTGCTACTGCAACCCTCAGTCTCGTCCGAT
* * * *
16488748 CTTAGACGGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * * * *
16488813 TGGGCACTACTCCGGCCAAAGAGATGGGATGCGTAAGCCGTGGATTGATAGGGTGGTAGGTGGGT
66 CGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * **
16488878 TTAGGCACATCTTGATATTTATGCATGCCAATGTGATTTTTATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* **
16488943 TCCCTTAAGCCTTCCCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * **
16489008 AAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGCGTTTTGGAACCAAACTTGGTA
261 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
16489073 GACGTGATCCTTGTATTTTTGTTGGCATACAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
326 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * * * *
16489138 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTTAGATACTTTAATGCCTACTGACAGCAAAC
391 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * *
16489203 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGATGTTTGATAACGGATAGGGGGC
456 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
*
16489268 CAATATAAGGGCCAAGTACCTGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGA
521 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGA
* * *
16489333 TCGCCGGAACCCCAATGCTGCCGGTCAGGTTCTCCCCCGACGCTCCGGCAATGGTGCCCTGACGA
586 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT----CGA-GCTCCGGCGATGGTGCCCCGACGA
* *
16489398 AGAAAAATGCGGCACCAGCACATGCTCGAGCCCATCATGTGCTGCCACAACCCTCGGTCCGGTCC
646 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCC
* * * * *
16489463 GATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGTCAACCCACAAAACGAGCATGTGGGCGCTT
711 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * **
16489528 AGCCGGCTAGAGGGGCGGGATGCGTAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTG-CTG
776 AGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-G
* * * *
16489592 ATCCTGCTACCGCAACCCTCAAT-TTGCTCAGAT
840 ATCCTGCTACTGCAACCCTCAGTCTCG-TCCGAT
* * * * *
16489625 CTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGTGGCCAGACGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
** * * *
16489690 CGGGCACTACGT-CGGCCAGAGAGACGGGATGCGCAAGTTGTGCATCGATAGGTTGGTAGGTGAG
66 CGGGCACTAC-TCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
** *
16489754 TTTACTCACATCTTCATATTTCTGCATGCCAATGCCGTTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
16489819 GTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACTCATTTTCTATTTTTCATGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* ** * * * * ** **
16489884 GAAAGTTTTTGTGGTTCGGGATTTTTAAAAATTTTTTTGGTAGGGGTTTTGGCCTGAAACTTTTT
260 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * *
16489949 TGACG-GAATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTAC
325 AGACGTG-ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * * *
16490013 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGAGACTTTAATTGCTACTAGCAGCAA
389 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
** *
16490078 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGATTGATAGGAG
454 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
*
16490143 GCCAATATAAGGGCCAAGTACCAGTACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC
519 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCC
* * * * *
16490208 CGATCACCGAAACCCCAATGCCACCGGTTAGGTTCTCCGGTGATCCTCCGGCGATGGTGCCCCGA
583 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C---GA-GCTCCGGCGATGGTGCCCCGA
* * *
16490273 CAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAG
643 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--T-C-G
* *
16490338 TCTGATCTTAGACTAGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCTGTATGACTAAGT
702 ---G-TC-----C--GG--T---C--CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * *
16490403 CAACCCACGAAACGAGCGTGCGGGTGTTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGAGGAT
747 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGAT
* * * ** * ** * * * *
16490468 CGGCCAGGTCCCCCTCAGCGTGCTACCGATCCTACTACCACAACCGTCACTTTAGTCTC-AT
812 CGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACTGCAACCCTCAGTCTCGTC-CGAT
* * * *
16490529 CTTAGACTAGGAATGAACTCCGTATGCCTACGCCAACCGACGAAATGAGCGGGGCGGGTGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGGCGGGCGGGCGG
* * * *
16490594 GCAGGCATTA-TACCGACCAGAGTGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
65 GCGGGCACTACT-CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
16490658 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTTTTAATTCATACAGT
129 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
16490723 GGTCCATTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
194 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** * * *
16490788 CAAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGG
259 TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
16490853 TAGACATGATCCTTGTATTATTT-TTGGTATGCACAAAAACATTCAGCTAAAAGCTCGAAGTGTA
324 TAGACGTGATCCTTGTATT-TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * * *
16490917 CAGGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCACACACTTTAATGGCTACTGGAAGCA
388 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * *
16490982 AACCTGTAAAATGTCAAATGCTTTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGCG
453 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
16491047 GGCCAATATAAGGGACAAGTACCAGCACCCATCGCACATCATGTGCGTACA---------CCCCC
518 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * * * *
16491103 CGATCGTCGAAACCCTAATACCGCCGGTCA-G-T-T----CTCCGGCGATGGAGCCCCGACG-AG
583 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCGAGCTCCGGCGATGGTGCCCCGACGAAG
* * *
16491160 GAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGA
648 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--T-CG----G-
*
16491225 TCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATTAACTCCGTATGCCTAAGTCAACC
703 TC-----C--GG--T---C-C-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* *
16491290 CACGGAACGAGCGTGCGGCCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA------G--C--TC
752 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTC
* * * * * * *
16491345 GGGTCCCCCTCTGCATGCTATCGATCCTACT-GTCACAAACCTCAGTCTGGTCCGAT
817 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACT-GCAACCCTCAGTCTCGTCCGAT
* * * *
16491401 CTTAGACTGGGAATAAACTCCGTACGCCTAAGCCAACCGACGAAAC-A---AGCGGGCAGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * *
16491462 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGTATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16491527 TTAGGCACATCTTCATATTTCTACCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGG
131 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
16491592 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCTCGATCTTTG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * ** *
16491657 AAACCTTTTGCGGTTCGGGATTTTTTTTAATTTTTTCGGAAGTAGTTTTGGCCCCAAACTTGGTA
261 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
16491722 GACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAA
326 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
16491787 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGCTTCTGGCAGCAAAC
391 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * *
16491852 CTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGTC
456 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * * *
16491917 CAATGTAAGGGCCAAGTACCAGCACCCATCGCACATCATATGTGCGCA-CCCCCCGACCCCCCGA
521 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGA
* * * * * *
16491981 TCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCTGGCGATGGTGCCCTGGCAA
586 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C---GA-GCTCCGGCGATGGTGCCCCGACGA
* *
16492046 AGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCAGTCTGGTTT
646 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--TC--G---
* * *
16492111 GATCTTAGACTGGGAATGAACTCCGTATGCCTAGAATGGGAATGAACTCTGTATGCCTAAGTCAA
702 G-TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * *
16492176 CCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGCGATGCGCAAG-TCGAGGATCG
750 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCG
* * * * * * * **
16492240 GCCCGATCCCCCTCTGCGTGATGTCGACCCTGCT-GTCGTAACCCTCAGTC-CGATCTTAT
814 GTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACT-GCAACCCTCAGTCTCG-TCCGAT
* *
16492299 CTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGA---GG-GGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * * *
16492360 CGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCTGTGGAACGATAGGGTGGTAGGTGGGT
66 CGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
16492425 TTAGGCA-ATTCTTCATATTTCTGCTTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATG
131 TTAGGCACA-TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
16492489 GTCCCTTAAGCCTTCACGTG-AGTTTCGTGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* *
16492553 GAAACATTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTTGCCCCAAACTTGGT
260 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
16492618 AGACGTGATCCTTGTATTTTTGTTCGCACGTACAAAACAATTCAGCTAAAAACTCAAAGTGTACA
325 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * *
16492683 AGATTTTTGTGACCATTTGCAAAAAAAGTTTGTCCCCATTTCAAATAGTTTAATGGCTACTGGCA
390 AGA-TTTTGTGACCATTTG--AAAAAAG--TGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
16492748 GCAAACCTGTAAAAGCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATA
450 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * * ** *
16492813 GGGGGCCAATATAAGGCCCAAGT-CCAGAACCCATCACACATCATGTGCGCACAGCCCTGCGACC
515 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-GC
* * * * * *
16492877 CCCCCGATCACCAGAACCCCAATGCCGTCGATCAAGTTCT-----T-CGGCGATGGTGCCCTGAC
579 CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCGAGCTCCGGCGATGGTGCCCCGAC
* * * * ** **
16492936 AAAGAAAAATGCGGCACCAGCACATGCCTGAGCCTAGCATGTGCTGTCGGAACCCTCGGTCCAAT
644 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGT
*
16493001 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGC
709 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * *
16493066 TCAGTCGGCCAGAGGGGCGGGATGCGCAAACTGGGGATCGATCGAGTCCCCCTGTACGTGTTGTC
774 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC
* * * *
16493131 GATCCTGCTGCTGCAACCCTTAATC-CGATCTGAT
839 GATCCTGCTACTGCAACCCTCAGTCTCG-TCCGAT
* * * *
16493165 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACAAAACGAGCGAGCGGGCGGGCGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* ** * ** *
16493230 CAGGCACTAGGCCGGCCAGAAAGACGGGATGCGCAAGCCGTCAATCCATAGGGTGGTAGGTGGGT
66 CGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16493295 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTTTGGCTTGGAAATTCATACAATTG
131 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * **
16493360 TCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACTACTCGTTTTCAATTTTTCACGATTTTCA
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * * *
16493425 AAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGAAAGGAATTTTGGCCCCAAACTTTGCA
261 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
16493490 GACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAAAAATTCAGCTAAAAACTCAAAGTGT
326 GACGTGATCCTTGTATTTTTGTTGGCATGCAC----AAAAAAATTCAGCTAAAAACTCGAAGTGT
* *
16493555 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAGTGGCTACTGGCAGC
387 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * *
16493620 AAACCTGTATAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTC-AGGTTTGATGAGGTAAAG
452 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-TCGAGGTTTGATGAGGGATAG
*
16493683 GGGGCCAATATAGGGGCCAAGTACCAGCA
516 GGGGCCAATATAAGGGCCAAGTACCAGCA
16493712 NNNNNNNNNN
Statistics
Matches: 6582, Mismatches: 811, Indels: 410
0.84 0.10 0.05
Matches are distributed among these distances:
853 52 0.01
854 3 0.00
855 3 0.00
856 33 0.01
857 17 0.00
858 239 0.04
859 218 0.03
861 2 0.00
862 2 0.00
863 4 0.00
865 1 0.00
866 345 0.05
867 470 0.07
868 8 0.00
869 50 0.01
870 209 0.03
871 128 0.02
872 91 0.01
874 18 0.00
875 70 0.01
876 387 0.06
877 918 0.14
878 131 0.02
879 282 0.04
880 4 0.00
881 4 0.00
882 169 0.03
883 23 0.00
884 1 0.00
885 19 0.00
886 120 0.02
887 354 0.05
888 189 0.03
889 5 0.00
890 3 0.00
891 4 0.00
892 129 0.02
893 7 0.00
894 6 0.00
895 37 0.01
896 36 0.01
897 163 0.02
898 248 0.04
899 5 0.00
900 9 0.00
901 27 0.00
902 251 0.04
903 457 0.07
904 174 0.03
905 453 0.07
906 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (872 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
CGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGA
TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCGAGCTCCGGCGATGGTGCCCCGACGAAGAAA
AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCT
TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
GCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTG
CTACTGCAACCCTCAGTCTCGTCCGAT
Found at i:16491255 original size:26 final size:26
Alignment explanation
Indices: 16491226--16491278 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16491216 CCGATCTGAT
*
16491226 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16491252 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16491278 C
1 C
16491279 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16492152 original size:26 final size:26
Alignment explanation
Indices: 16492116--16492169 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
16492106 GGTTTGATCT
*
16492116 TAGACTGGGAATGAACTCCGTATGCC
1 TAGAATGGGAATGAACTCCGTATGCC
*
16492142 TAGAATGGGAATGAACTCTGTATGCC
1 TAGAATGGGAATGAACTCCGTATGCC
16492168 TA
1 TA
16492170 AGTCAACCCA
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
TAGAATGGGAATGAACTCCGTATGCC
Found at i:16495077 original size:11 final size:11
Alignment explanation
Indices: 16495061--16495092 Score: 64
Period size: 11 Copynumber: 2.9 Consensus size: 11
16495051 CTGGGGCACT
16495061 ATCACCGGAGC
1 ATCACCGGAGC
16495072 ATCACCGGAGC
1 ATCACCGGAGC
16495083 ATCACCGGAG
1 ATCACCGGAG
16495093 AACCTGATCG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 21 1.00
ACGTcount: A:0.28, C:0.34, G:0.28, T:0.09
Consensus pattern (11 bp):
ATCACCGGAGC
Found at i:16495868 original size:26 final size:26
Alignment explanation
Indices: 16495832--16495882 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16495822 GTTGACTTAG
*
16495832 GCATACGGAGTTCATTTCC-AGTCTAC
1 GCATACCGAGTTCA-TTCCTAGTCTAC
16495858 GCATACCGAGTTCATTCCTAGTCTA
1 GCATACCGAGTTCATTCCTAGTCTA
16495883 TGATCAAACC
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
25 4 0.17
26 19 0.83
ACGTcount: A:0.24, C:0.27, G:0.18, T:0.31
Consensus pattern (26 bp):
GCATACCGAGTTCATTCCTAGTCTAC
Found at i:16496925 original size:26 final size:26
Alignment explanation
Indices: 16496889--16496941 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16496879 GTTGACTTAG
* *
16496889 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16496915 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16496941 G
1 G
16496942 ATCGGATCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.21, T:0.32
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16497810 original size:26 final size:26
Alignment explanation
Indices: 16497781--16497833 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16497771 GTTGACTTAG
16497781 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
16497807 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16497833 G
1 G
16497834 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16501359 original size:26 final size:26
Alignment explanation
Indices: 16501323--16501375 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16501313 GTTGACTTAG
16501323 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16501349 GCATACGGAGTTCATTGCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16501375 G
1 G
16501376 ATTGGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16502253 original size:26 final size:26
Alignment explanation
Indices: 16502224--16502276 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16502214 GTTGACTTAG
16502224 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16502250 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16502276 G
1 G
16502277 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16503157 original size:26 final size:26
Alignment explanation
Indices: 16503127--16503179 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16503117 GTTGGCTTAG
*
16503127 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
16503153 GCATACGGAGTTTATTCCTAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16503179 G
1 G
16503180 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:16503180 original size:903 final size:904
Alignment explanation
Indices: 16499552--16515176 Score: 19643
Period size: 905 Copynumber: 17.4 Consensus size: 904
16499542 GTTGACTTAG
* * * * *
16499552 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCAAGGGTTACGGCAGCACATGATGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
16499617 CTTGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCAGGGCTCCATCGCCGGAGCATCAG-GGGAG
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATC-GTCGGAG
* * * * * *
16499681 AACCTGACCGGTGACATTGGGGTTCCGACGATC-GGGGGGCCGAGAGGGTGTGCACACATGATGT
130 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
* * * * *
16499745 CCAATGGCTGCTGGTACTTGGCCCTTATATTGGCCACCTATCCATCATCAAACCTCGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * *
16499810 CACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGTCAGTAGGCATTAAAGTATCTGAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
16499875 TAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGACTTTTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * ** *
16499940 GTGCCTGCCAACAAAAATACAAGGATCACGTCTGCCAAGTGTGGTTCCAAAACTCCTTTCGAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
16500005 AATTTAAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
455 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
16500070 TGCCATGAAACTTCACGGGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
520 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
16500135 ATTGGCATGCAGAAATATCAAGATGTGCCCAAACCCACCTACCACCCTATCGATCCACGGCTTGC
585 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * ** * * **
16500200 GCATCCCGTCTCTCTGGCC-AGCAG-AGTGCCCACCCGCCTGCCCAACCACTTGTTTTGTCGGTT
650 GCATCCCGTCTCTCTGGCCGA-C-GTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTT
* ** * ** *
16500263 GGCTTAGGCATACGGAGTTCATTCCCCGTCTAAGATTGGACCAGATTGAGGGTTGCGGTAGCAGG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGG
** * * * * *
16500328 ATCGACAGCACACAAAGGGGGACCCGTCCGATCCCCGGCTTGTGCATCCCACCCCTCTGGCCGAC
778 ATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * *
16500393 TGAGCGCCCGCACGTTCGTTTCGTGGGTTGACTTAGGCAGACGGAGTTGATTCCCAGTCTAA
843 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
16500455 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
16500520 CTCGGGCATGTGCTAGTGCCACATTTTTCTTTGTCGGGGCACCATCGCTGCAGCATCGACGAAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * ** * *
16500585 ACCTGATCGACGGCATTGGGGTTCCGATGATCGGGGGGGCCGAGGGGGGTGTGCGCACCTGACGT
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGGTGTGCGCACATGATGT
* * *
16500650 GCGATGGGTGCTGGTACTTGGTCCTTATATTGGCCCTCTATCCCTCATCAAACCTTGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
16500715 TACCCCCTTAAAGAGCATTTGACATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
16500780 TGGGAATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * ** *
16500845 GTGCATGCCAAAAAAAATGCAGGGATCATGTCTACCAAGTTTGGGGTGAAATCTCCTTCC-ACAA
390 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA-AA
* * * * * * * * *
16500909 AAATTTTAAAAAATCTCGATCAGCAAAAGGTTTCGAAAATCATGAAAAATAGAAAACGACTCGTG
454 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * *
16500974 TTGCCATGTAACTTTACGTGAAGGCTTAGGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
519 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * *
16501039 CATTGGCACGCAGAAATATGAAGATGTGCCTAAACACACCTACAACTCTATCGATCCACGGCTTG
584 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* ** * * * * *
16501104 CGCATCCCGTCTCTCTAGCCGGTGTAGTGCCCGCCCGTCCGCCCGCCCACTCTTTTCATCGGATG
649 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTG
* * * * * *
16501169 GCTTAGGCATACGGGGTTCATACCCAGTCTAAGATCGGACCGGACTGAGGGTTGCGACAGTAGGA
714 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGA
* * * * * *
16501234 AC-AGCAGCACGCAGA--AGG----G---GA--CCCGGCTTGCGCATCCCGTCCCTCTGGTCGGT
779 TCGA-CAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
*
16501287 TGAGCGCTCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
16501349 GCATACGGAGTTCATTGCCAGTCTAAGATTGGACTGGACCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * *
16501414 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGAGTACCATCGCCGGAGCATCATCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
** * * *
16501479 ACCTGACCGTTGGCATTAGGGTTCTGGCGATCGGGGGGGCC-GGGGGGTATGCGCACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* * *
16501543 TGATGGGTACGGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
16501608 -GCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
16501672 GGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGGTTTTAGCTGAATTTTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
16501737 TGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAA
391 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * *
16501801 ATATTAAAAAATCTCGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
456 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
16501866 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAGGCCATAAAAATGGCA
521 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
16501931 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCCACCACCCTATCGATCCACGGCTTGCG
586 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* *
16501996 GATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCAGTTGGC
651 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTGGC
* * * *
16502061 TTAGGCGTACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTGTGGCAGTAGGATC
716 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATC
* * * * * * * *
16502126 AACAACACGTAGAAGGGGAACCGACCGATCCCTGGCTTGCGCATCCCACCCCTCTGGCCTGCAGA
781 GACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
*
16502191 GCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
846 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
16502250 GCATACGGAGTTTATTCCCAGTCTAAGATCGGACCGGGCCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** * *
16502315 CTCGAGCATGTGCTGGTGTCACATTTTTCTTCACCGGGGCACCATCGCCAGAGCATCGTTGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* *
16502380 ACCTGACCGGCGGCATTAGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTTGTGCACACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGG-TGTGCGCACATGATGT
* * *
16502445 ACGATGGGTGCTGGTACTTGGCCCTTATCTTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
16502510 CACCCCGTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
16502575 TGGGGACACTTTTTTCAGATGGTCACAAAATCTTGTACACTTAGAGGTTTTAGCTGAATTTTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* *
16502640 GTGCATGCCAACAAAAATACAAGGATCATGTCTACCAGGTTT-GGGCCAAAACTCCTTCCGAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * ** * * * *
16502704 AATATTAAAAGATCTTGAACCGCAAAAAGTTTCAAAAATCATGAAAAACAGAAAACGAGTCGTTT
455 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
16502769 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
520 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
16502834 ATTGGCATGCAGAAATATGAAAATGTGCCTAAA-CCACCCACCACCCTATCGATCCGCGGCTTGC
585 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
16502898 GGATCCCGTCTCTCTGGCCGACGTGGTGCCCGCCCGCCCGCTCGCCCGCTTGTTTCATCAGTTAG
650 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTGG
* * * *
16502963 CTTAGGCATACGGAGTTCATTCTCAATCTAAGATCAGACCGGACCGAGGGTTGTGGTAGCAGGAT
715 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGAT
** * * *
16503028 CGACAGCAAATAGAGGGGGGCCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
780 CGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * *
16503093 AACGCCCGCACGCTCGTTTCATGGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
845 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** *
16503153 GCATACGGAGTTTATTCCTAATCTAAGATCGGACCGGGTCGAGTGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * ** * ** * *
16503218 CTCGGGCATGTGCTGGTGTCGTATTTCTCTTCACCGGGGCACCATCGCCAGAGCATCACCGAAAA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * ** * *
16503283 ACCTGACCAGCGGCATTAGGGTTCCGTTGATCGGGGGGGCCGGGGGGTTGTGCGCACATGATGTA
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
*
16503348 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
16503413 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
16503478 GGGGACACGTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGGTTTTAGCTGAATTTTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
*** * *
16503543 TGCATTTGAACAAAAATACAAGGATCATGTCTACCAAGTTT-GGGCC-AAACTCCTTTCGAAAAA
391 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * *
16503606 ATATTCAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATA-AAAACGAGTCGTCTT
456 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
16503670 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGTCATAAAAATGGCA
521 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * * *
16503735 TTGGCACGCAAAAATATGAGGATGTGCCTAAACCCACCCACCACCCTATCGATCCACGACATGCG
586 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * ** * *
16503800 GATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCCGCCCACTCACCTACTCGTTTCAGCAGTTGG
651 CATCCCGTCTCTCTGGCCGACGTAGTGCCCG-CCCGCCCGCTCGCCCGCTCGTTTCATCGGTTGG
* * * *
16503865 CTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGTAGGAT
715 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGAT
* * ** * * * *
16503930 CGACAGCATGTAGAGGGAGACCCGGTCGATCCCTGGCTCGCGCATTCCGCCCCTCTTGCCGGCTG
780 CGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * *
16503995 AGCGCTCGCATGCTCATTTCATGGGTTGACTTAGGCATAC-GAGTTCATTCCCAGTCTAA
845 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
16504054 GCATCCGAAGTTTATTCCCAGTCTAAGATCGAACCGGGCCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * *
16504119 CTCGGGTATGTGCTGGTGCTGA-AATTTTCTTCGTCGGGGTACAATCGCCAGAGCATCCTCGGAG
66 CTCGGGCATGTGCTGGTGC-CACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
* * *
16504183 AACCTGACCGGTGACATTAGGGTTCCGGCGATC-GGGGGGCCGGGGGGGTTGTGCGCACATGATG
130 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGG-TGTGCGCACATGATG
**
16504247 TATGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
16504312 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
16504377 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
16504442 TCTGCATGCCAA-AAAAATACAAGGATCACGTCTGCCAAG-TT-GGGCTAAAAAATCCTTCCGAA
389 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC-CAAAACTCCTTCCGAA
* ** *
16504504 AAAATTTAAAAAAATCTTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATTGAAAACGAGTCGT
453 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
16504569 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGATCATTGTATGAATTTACAAGCCATAAAAATG
518 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* **
16504634 GCATTGGCATGCAGAAATATGAAGATGTGTCTAAAGTCACCTACCACCCTATCGATCCACGGCTT
583 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
16504699 TCGCATCCCGTC-CTCTGGCCGACTTAGT----GCCCACCCGCT----CGCTCGTTTCGTCGGTC
648 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTT
* * * * *
16504755 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGGTC-GAATCGGACCGAAGGTT---ACAGAAG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACCGAGGGTTGCGGCAGCAG
* * * * * * *
16504816 GATTGTCAGCATGTAGTGGGGGACCCGGCCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGA
777 GATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
** *** * * * * *
16504881 AGGAGCAATCGCACGCTCTTTTCGTGGGTTGACCTAGGCATATGGAGTTCATTCCTAGTCTAG
842 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * * *
16504944 GCATACAGAGTTCATTCCCAGTCTAAAATTGGACCAGACCGAGGGTTGCGGTAGCATATGCTAGT
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * **
16505009 CTCGGGCATATGCTGGTGCCACATTTTTCTTCG-CAGGGGCACGATCATCGGAGCATCGTCGGAG
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGGCACCATCGCCGGAGCATCGTCGGAG
* * * *
16505073 AACCTCACCGACGGCATTGGTGTTCCGGCGATCGGGGGGGCC-AGGGGGTGTGCGCACATGATGT
130 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
* *
16505137 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTTGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
16505202 CACCCCCTTAAAGAGCATATGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * *
16505267 TGGGGACACTTTTTTCAAATGCTCACAAAATCTTGTACATTTCGAGATTTTAGCTGAATTTTTTC
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *** *
16505332 ATGCATGCCAACAAAAATACAAGGATCACCTCGACCAAGTTTGAAACCAAAAATCCTTCCGAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** *
16505397 AATTTTAAAAAATCCTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTTT
455 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
** *
16505462 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTGATAAAAATGGT
520 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * * * * *
16505527 ATTCGCATGTAGAAATATGAAGATATGCCCAAACTCACCTACCACCCTACCAATCCACGGCTTGC
585 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
16505592 -CAATCCCGTCCCTCTGGCCG--GTA-T---AG--TG--C-C-CGCCCGCTCGTTTCGTCGGTTG
650 GC-ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTG
* * *
16505644 GCTTAGGCATAGGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGACAGCAGGA
714 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGA
* * ** * * * * *
16505709 TCAATAGCACACAGAGAGGGACCCGGCCGATCCCCGACTTGAGCATCCCGCCCATCTGGCCGGCT
779 TCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
*
16505774 GAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
844 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
16505835 GCAAACGGGGTTCATTCCCAGT-TGAAGATCAGACTGGACCGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCT-AAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* *
16505899 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGCAGCATCG-CGAAA
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCG-GA
* * *
16505963 GAACCTTACCAGCGGCATTGGGGTTCCGGCGATCAGGGGGGCCGGCGGGGGTTGTGCGCACATGA
129 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGG-GGGGG-TGTGCGCACATGA
** *
16506028 TGTGCGATGGGTGCTGGTACTCAGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCTAGAAC
192 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
16506093 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTG
257 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
16506158 AAATGGGGACACTTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTTGGCTGAATT
322 AAATGGGGACAC-TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG-TTTTTAGCTGAATT
* * * *
16506223 TTTTCT-TGCATTCCAACAAAAATACAAGGATTACATCTACCAAGTTTGGGACCAAAACTCCTTC
385 TTTT-TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * *
16506287 TGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCTTGAAAAATAGAAAACGAC
449 CGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
* * *
16506352 TTGGCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCCATAAA
514 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* *
16506417 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAGCATCCTATCGATCCACG
579 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * *
16506482 GCTTGCGCATCCCGTCTCTTTGGTCGGCGTAGTGCCCACCCGCCCG-TCCGCCCGCTCG-TTCAT
644 GCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCT-CGCCCGCTCGTTTCAT
* * ** * * * **
16506545 CGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAAATTGGACCGAACTGAGGGTTACGATA
708 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCA
* * *
16506610 GCAGGATCGACAGCACGTAGTGGGGGACCCGATCAATCCCCGGCTTGCGCATCCCGCCCCTCTGG
773 GCAGGATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * * * * *
16506675 CCGGTTGAGTGCCCGCACGCTCATTTCGTGGGTTGACTTAGGTATA-TGACATTCATTCCCAATC
838 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA-GTTCATTCCCAGTC
16506739 TAA
902 TAA
* * *
16506742 GCA-AGCAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCT-G
1 GCATA-CGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * *
16506805 G-T---GC-----C--GT-----ATTTTTCTTCGTCGGGGCACCATCGTCGGAGCTTCATCGGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
* * *
16506854 AACCTGACCGGCGGCATTAGGGTTCCGACGATCGGGGGGGCCGGGGGCGGTGTACGCACATGATG
130 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGG-GGTGTGCGCACATGATG
* *
16506919 TGTGATGGGTGCTGGTACTTGGCCCTTATGTTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
16506984 ACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
16507049 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTATT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT-TT
*** * * * * *
16507114 TACAG-ATGCCAAAAAAAATAAAAAGATCACGTCTACCAAGTTTGGGGCCAAAACACCTTGC-AA
388 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
** * *
16507177 AAAAAGTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGT
453 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * * *
16507242 CTTGCCATGAAACTTGATGTGAAGGCATAAGGGACCATTGTATGAATTTATAAGCCATAAAAATG
518 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * ** * *
16507307 GAATTGGAACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCATGGCTT
583 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * ** *
16507372 GCGCATCTCGTCTCTCTGGCCGGCGTAGT----GCCC-ATCG---GCCCGCTCGTTTAATCGGTT
648 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTT
* * * ** * *
16507429 AGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATC-GAACTGGATGGAGGATTGCGGCAGCTG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACCGAGGGTTGCGGCAGCAG
* * * * *
16507493 GATCGACAGCACGTAGAGGGGGACCTGGCCGATACCCGGCTTGTGCATCCCTCCCCTCTGGCCGG
777 GATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
*
16507558 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
842 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** * * * * * *
16507621 GCACACGGAGTTCACT-CTGGTCTAAGATTGGACCTGACCGAGGGTTACAGCTGCACATGCTGGT
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
16507685 CTCTGGCATGTGCTGGTGGCACATTTTTCTTCGCCGGGGCACCATCGCCAGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * * *
16507750 ACCTGACCGACGGCATTGGGGTTTCGGTGATCGGGGGGGTC-AGGGGGTGTGTGCACATGGTGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
** * * * *
16507814 CGATGGGTGCCAGTATTTGGCCCTTACATT-G-CCCCTATCCCTCATTAAATCTCGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * * **
16507877 ACCCCCTTAAAAAGCATTTGAGATTTTATAGGTTTGCTGCTAGTAGCCATTAAAGGGTCAAAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
16507942 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATATTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
16508007 TGCATGCCAATAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCATCCGAAAAA
391 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * *
16508072 ATTTAAAAAAATCCCAAACCGCAGAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
456 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
16508137 GCCATGAAACTTGACGTGAAGGCTTAAGGGACCAATGTATGAATTTACAAGCCATAAAAATGGCA
521 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
16508202 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAGCATCCTATCGATCCACGGCTTGCG
586 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * *
16508267 CATCCCGTCTCTTTGGTCGGCGTAGTGCCCACCCGCCCG-TCCGCCCGCTCG-TTCATCGGTTGG
651 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCT-CGCCCGCTCGTTTCATCGGTTGG
* * * ** * * * **
16508330 CTTAGGCATACGGAGTCCATTCCTAGTCTAAAATTGGACCGAACTGAGGGTTACGATAGCAGGAT
715 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGAT
* * * *
16508395 CGACAGCACGTAGTGGGGGACCCGATCAATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGTTG
780 CGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * * * *
16508460 AGTGCCCGCACGCTCATTTCGTGGGTTGACTTAGGTATA-TGACATTCATTCCCAATCTAA
845 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA-GTTCATTCCCAGTCTAA
* * *
16508520 GCA-AGCAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCT-G
1 GCATA-CGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * **
16508583 G-T---GC-----C--GT-----ATTTTTCTTCGTCGGGGCACCATCGTCGGAGCTTAATCGGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
* * *
16508632 AACCTGACCGGCGGCATTAGGGTTCCGACGATCGGGGGGGCCGGGGGCGGTGTACGCACATGATG
130 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGG-GGTGTGCGCACATGATG
* * *
16508697 TGTGATGGGTGCTGGTACTTGGCCCTTATGTTGGCCCCCTATCCCACATCAAACCTCGAGAACTC
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
16508762 ACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
16508827 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTATT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT-TT
*** * * * * * *
16508892 TACAG-ATGCCAAAAAAAATAAAAAGATCACGTCTACCAAGTTTGGGGCCAAAACACCTTGCAAA
388 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* *
16508956 AAAAGTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
453 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* *
16509021 CTTGCCATGAAACTTGACGTGAAGGCTTAAGGGACCAATGTATGAATTTACAAGCCATAAAAATG
518 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
16509086 GCATTGGCATGCAGAAATATGAAGATGTACCTAAACCCACGTACCACCCTATCGATCCACGGCTT
583 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * *
16509151 GCGCATCCCGCCTCTCAGGCCGATGTAGTGCCCGCCCGCCC-ATCCGCTCGCTCGTTTCGTCGGT
648 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCT-CGCCCGCTCGTTTCATCGGT
* * * ** * *
16509215 TGGCTTAGGCATACAGAGTTCATTCCTAGTCTAAGATCAGACCGAATTGAGGGTTGCTGTAGCAG
712 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAG
* * * * * *
16509280 GATCGACAACACGTTGAGGGGGACCCGATCAATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGG
777 GATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* *
16509345 TTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTAA
842 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ***
16509408 GCATACGGAGTTCATTCCCTGTCTAAGATCAGATCAGACCGAGGGTTGCAATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * **
16509473 CTCGAGCATGTGCTGGTGACGCAATTTTCTTTGTCGGGGCACCATCGTCGGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * *
16509538 ACCTGACCGGCGACGTTGGGGTTCCGGCGATCGGGCGGGTCGGGGGGGGTGTGCACACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGG-GGGGCCGGGGGGGTGTGCGCACATGATGT
* *
16509603 GCGATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
16509668 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
16509733 TGGGGACACTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
16509798 ATGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTCTGGGGCCAAAACTCCTTCTGAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * **
16509863 AATTTTAAAAAATCCCAAACCGTAAAATGTTTGGAAAATCGTGAAAAATAGAAAACGAGTCGTCT
455 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
16509928 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACATGCCATAAAAATGGC
520 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
** *
16509993 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGC
585 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * * * *
16510058 GTATCCCATCTCTCTGGCC-AGCGTAGTGCCTGCCCGCCAGCCCGCCTGCTTGTTTCATCGGTCG
650 GCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTG
** * * * * * * * *
16510122 GCTTAGGCATACATAGTTGATACCCAGTCTAAGATTAGACTGGACCAAGGGTTGTGGTAGTAGGA
714 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGA
* * * ** * * * * * ** *
16510187 TTGGCAGCACATAGAGGGGGACCCGGTCAATCTCTGGGTTGCACATCCTACCCCTCTGGCCGACT
779 TCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * *
16510252 GAGCGCCCGCACGCTCGTTTCATGCGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
844 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
16510313 GCATACGGAGTTCATTCCCAGTCTAAGCATATGAAGTTCATTCCAAGTCTAAGATCGGACCGGAC
1 GCATAC-G-G---------AGT-T---C------A-TTC---CC-AGTCTAAGATCGGACCGGAC
* * * * *
16510378 CGAGGGTTGCGACAACACATGCTGGGCTCGGGCACGTGCTGGTGCTACATTTTTCTTCCTCGGGG
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG
*** *
16510443 CACCATCGCCGGAGCATTACCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGG
105 CACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGG
* *
16510507 -C-AGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTCGCCCCCTA
170 CCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
*
16510570 TCTCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
235 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * *
16510635 CCAGTAGCCATTAAAGTGTTTGAAATGGGGACATTTTTTTCAAATGGCCACAAAATCTTGTACAC
300 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * *
16510700 TTCGAGTTTTTAGCTGACTTTTTTTGTGCATGCCAACAAGAATACAAGGATCACGTTTACCAAGT
365 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
* * * * * **
16510765 TTGGGGCTAAAACTCCTTTCAAAAAAAATTTAAAAAATCTCGAACCGTAAAAAGTTTGGAAAATC
430 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC
* * * *
16510830 GTGAAAAATAGAAAACGAGTCATCTTGCCTTGAAAATTTCACGTGAAGGCTTAAGGGAACATTGT
495 GTGAAAAATAGAAAACGAGTCGTCTTGCCATG-AAACTTCACGTGAAGGCTTAAGGGACCATTGT
* *
16510895 ATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATAAAGATGTGCCTAAACCCACC
559 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACC
* * * * * * **
16510960 AACCACCACTATCAATCTACGGCCTACGCATCCCGTCTCTCTGGCTGGTGTAGTGCCCGCCCGCC
624 TACCACC-CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGT----GCCCG-C
** *
16511025 CGTCTGCCCGCTCGCCCGCTCGTTTCATCGGTTGGCTTAAACATACGGAGTTCATTCCCAGTCTC
683 C--C-GCCCGCTCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * * * * ** ** *
16511090 AGATCAGACTGAATCGTGGGTTACGGTAGTAGGATCGACAGCACACAGAGGGGGACCCGGTCAAT
745 AGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGTAGAGGGGGACCCGACCGAT
* * * * * *
16511155 CCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCGCCTGCACGATCATTTTGTGGGTTGAC
810 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
16511220 TTAGGCATACGGAGTTCATTCCCAGTCTAAA
875 TTAGGCATACGGAGTTCATTCCCAGTCT-AA
* * ** * *
16511251 G-ATACGGAGTTCATTCCCAATCTAAGATTGGATAGGACCGAGGGTTGTGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * * * *
16511315 CTCGGGCATGTGCTGGTGCCGTATTTTTCTAC-CCTGGGGCACCATCGTCGGAGCATTGCCAGAG
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGGCACCATCGCCGGAGCATCGTCGGAG
* * * * * *
16511379 AACCTGACCGGTGGCATTGGGGTTTCGGTGATCGGGGGGGCC-GGGGGTTGTGCGTACATGATAT
130 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
* * *
16511443 GCGGTGGGTGCTAGTACTTAGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC-ATGAACTC
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GAACTC
* ** * * *
16511507 GCACTTCCTTAAAGAGCATTTGAGACTTTATAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
16511572 ATGGGGACATTTTTTTCAAATGGCCACAAAATCTTGTACACTTCGAGTTTTTAGCT-AACTTTTT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
* * * * *
16511636 CTGTGCAGGCAAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTCCTTTCGAA
388 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * * **
16511701 AAAAATTTAAAAAATCTCGAACCGCAAAAATTTTGGAAAATCGTGAAAAATAGAAAACGAGTCGT
453 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
16511766 CTTGCCTTGAAACTTCATGTGAAGGCTTAAGGGAACATTGTATGAATTTACAAGCCATAAAAATG
518 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * * *
16511831 GCATTGGCATGCAGAAATATGAACATGTGCCTAAACCCACCAACCACCCTATCAATCCATGGCCT
583 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * ** *
16511896 ACGCATCCCGTCTCTCTGGCCGACGAAAAGCCCGCCCG--C-C-CGCCCGCTCGTTTCGTCGGTT
648 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTT
* * * * * * * * *
16511957 GGCTTAGACATACGGAGTTCATTCCCAGTCTCAGATCAGATCGAATCAAAGGTTACAGCAGCAGG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGG
** * * *
16512022 ATCGACAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTACGCATCCTGCCCCTCTGGTCGGC
778 ATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * * *
16512087 TGAGCGCCTGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGAAGTTCGTTCCTAGTCTAA
843 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
16512149 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATTCGGATCGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGA-CCGGACCGAGGGTTGCGGCAGCACATGCTGG
* *
16512214 GCTCGGGCA-----T-GTG-------------C-T-GGGGCACCATCGTCGGAGCATCG-CTAGA
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTC-GGA
* * * * * *
16512257 GAACCTGACCAGCGGCATTGGGGTTCTGACGATC-GGGGTGCC-AGGGGGTGTGCGCACTTGATG
129 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATG
* *
16512320 TGCGATGGGTGCTGGTACTTCGCCCTTATATTGGCCCCCTATCCCTAATCAAACCTCGAGAACTC
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
** * * *
16512385 ACACTTCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAGGTGT-TTAG
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA-
*
16512449 AAT-GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCCGAATTTTT
323 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* *
16512513 TTGTGCATGCCAAC-AAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACACCTTCCGAA
388 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * *
16512577 AAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGCAAACAAGTCGT
453 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
16512642 CTTGCCGTGAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATA
518 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
**
16512707 GCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
583 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
** * * * * *
16512772 GCGCATCTTGTCTCTCTGGCCGGCGTAGTGCCCGCGCGCCC-ATCCGCTCGCTCATTTCATCGGT
648 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCT-CGCCCGCTCGTTTCATCGGT
* * * ** * * * * *
16512836 TGGCTTAGGCATATGGAGTTCATTCCCAATCTGAGATTGGATCC-AACCAAGTGTTGCGGTAGTA
712 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CCGGACCGAGGGTTGCGGCAGCA
* ** * * *
16512900 GGATC-AGCAGCATGCGGA-GGGGACCCGACCGACCCCCGTCTTGCGCATCCCTCCCCTCTGGCC
776 GGATCGA-CAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* *
16512963 GGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
840 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** *
16513028 GTATACGGAGTTCATTCCCAGTCTAAGATCGAACTAGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
16513093 CTCGAGCATGTGCTTGTGCCGCATTTTTCTTTGTCGGGGCACCAT---C---G---C--CGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * ** *
16513147 ACCTGAACGACGGCATTGGGGTTCCAGAGATTGGGGGGG-TTGGGGGGTGTGCACACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* * *
16513211 CGATGGGTGCGGGTACTTAGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
** * * *
16513276 ACTTCCTTGAAA-AGCATTTGAGACTTTACAGGTTTGCTGCCAGTAGCCATTAATGTGTCTTAAA
261 ACCCCCTT-AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
16513340 T-GGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTTGCTGAATTTTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* *
16513404 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** *
16513469 AATTTTAAAAAATCCTGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCT
455 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
16513534 TGCCATGAAACTTCACGTGAAGCCTTAAGGGACCATTGTATGAATTTACATGCCATAAAAATGGC
520 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*** * *
16513599 ATTGGCACATAGAAATATGAAGATGTGCCTAAACCCAACTACCACCCTATCGATCCACGACTTGC
585 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * ** * * *
16513664 GCATCCTGTCTCTCTGGCCGGCGTAGTGCACGCGTGCCCGCCCGCCCACTCGTTTCGTCGGTTGG
650 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTGG
* * * * *
16513729 CTTAGGCATACGGAGTTCATTCCCAATCTAAGA-CTAGATCAGACCGAGGATTGCGGCAGCAAGA
715 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-AGACCGGACCGAGGGTTGCGGCAGCAGGA
* * * * *
16513793 TCGACAACACGCAGAGGGGGACCCGACCTATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGTT
779 TCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * * * * *
16513858 GAGTGCCCCGTACGCTCGTTTCATGTGTTGACTTAGGCATACGGATTTCATTCCCTGTCTAA
844 GAGCG-CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * *
16513920 GCATAAAGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * *
16513985 CTCGGGAATGTGCTGGTGCTGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * *
16514050 ACCTGACCGACGGCATTGGGGTTTCGGCGATC-GGGGGGCCGGGGGGGT-TGTGCACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* * * *
16514113 CGATTGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTAATCAAACCTCGAGAACTTAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
16514178 A-CCCCTTAAAGAGCACTTGATATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
16514242 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTGTAGCTGAATTTTTTTA
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* ** * *
16514307 TGGATGTGAAAAAAAATACAAGGATCACGTCTACCAAGTTTAGGGCCAAAACTCCTTCCGAAAAA
391 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * ** *
16514372 ATTTTAAAAAATCCTGAACTGCAAAACGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTT
456 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
16514437 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAACCCAAAAAAATGGCA
521 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*** *
16514502 TTGGCACATACAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
586 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* ** * ** * * *
16514567 CATCCTGTCTCTCTAACCGACGTAGTGCACGCGTGCCCGCCCGCCCCTGCTCATTTCGTCGGTTG
651 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCG-CCC-GCTCGTTTCATCGGTTG
* * * *
16514632 CCTTAGGCATACGGAGTTCATTCCCAATCTAAGA-CTAGACCGGACCGAGGGTTACGGCAGCAAG
714 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-AGACCGGACCGAGGGTTGCGGCAGCAGG
* * * * * * * * * *
16514696 ATTGGCAGCATGAAGAGGGGGACCTGACCGATCCTCGGCTTGCACATCCCGCCCTTCTGGTCGAC
778 ATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * * *
16514761 TGAGCGCCCGTACGCTCATTTCATGGGTTGACTAAGGCATACAGAGTTCATTCCCAGTCTAA
843 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
16514823 GCATAAGGAGTTCATTCCCAGTATAAGATCGGATCGGACCGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * ** * *
16514888 CTTGGGCATGTGCTGCTACCATATTTTTCTTCGTCGGGGCACCATCATCGAAGCACCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * * *
16514953 ACCTGACCGACAGCATTGGGGTTTCGACAATCGGAGGGGCC-GGGGGGT-TGTGCACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* **
16515016 CGATGGGTGCTGGTACTTGGCTCTTATATTGGCCTTCTATCCCTCATCAAACCTCGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
16515081 ACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
16515146 GGGGACACTTTATTGAAATGGTCACAAAATC
326 GGGGACACTTTTTTCAAATGGTCACAAAATC
16515177 ATTTCGTGGG
Statistics
Matches: 12902, Mismatches: 1571, Indels: 497
0.86 0.10 0.03
Matches are distributed among these distances:
876 250 0.02
877 68 0.01
878 227 0.02
879 361 0.03
880 82 0.01
881 4 0.00
882 3 0.00
883 75 0.01
884 6 0.00
885 41 0.00
886 203 0.02
887 485 0.04
888 368 0.03
889 673 0.05
890 930 0.07
891 869 0.07
892 497 0.04
893 48 0.00
894 385 0.03
895 114 0.01
896 275 0.02
897 5 0.00
898 13 0.00
899 412 0.03
900 234 0.02
901 847 0.07
902 996 0.08
903 951 0.07
904 583 0.05
905 1242 0.10
906 18 0.00
907 228 0.02
908 11 0.00
910 1 0.00
911 158 0.01
912 109 0.01
913 325 0.03
915 3 0.00
916 4 0.00
917 1 0.00
920 1 0.00
922 1 0.00
925 1 0.00
926 4 0.00
927 331 0.03
928 98 0.01
929 38 0.00
930 4 0.00
931 123 0.01
933 4 0.00
934 2 0.00
935 1 0.00
936 2 0.00
937 184 0.01
938 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (904 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTGGC
TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATC
GACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:16503656 original size:26 final size:26
Alignment explanation
Indices: 16503609--16503658 Score: 64
Period size: 26 Copynumber: 1.9 Consensus size: 26
16503599 CGAAAAAATA
* ***
16503609 TTCAAAAATCCTGAACCGTAAAAAGT
1 TTCAAAAATCATGAAAAATAAAAAGT
16503635 TTCAAAAATCATGAAAAATAAAAA
1 TTCAAAAATCATGAAAAATAAAAA
16503659 CGAGTCGTCT
Statistics
Matches: 20, Mismatches: 4, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
26 20 1.00
ACGTcount: A:0.56, C:0.14, G:0.08, T:0.22
Consensus pattern (26 bp):
TTCAAAAATCATGAAAAATAAAAAGT
Found at i:16504954 original size:26 final size:26
Alignment explanation
Indices: 16504914--16504968 Score: 83
Period size: 26 Copynumber: 2.1 Consensus size: 26
16504904 GTGGGTTGAC
** *
16504914 CTAGGCATATGGAGTTCATTCCTAGT
1 CTAGGCATACAGAGTTCATTCCCAGT
16504940 CTAGGCATACAGAGTTCATTCCCAGT
1 CTAGGCATACAGAGTTCATTCCCAGT
16504966 CTA
1 CTA
16504969 AAATTGGACC
Statistics
Matches: 26, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.24, G:0.20, T:0.31
Consensus pattern (26 bp):
CTAGGCATACAGAGTTCATTCCCAGT
Found at i:16509422 original size:26 final size:26
Alignment explanation
Indices: 16509382--16509434 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16509372 GTTGACTTAG
16509382 GCATACGGAGATCATTCCCAGTCTAA
1 GCATACGGAGATCATTCCCAGTCTAA
* *
16509408 GCATACGGAGTTCATTCCCTGTCTAA
1 GCATACGGAGATCATTCCCAGTCTAA
16509434 G
1 G
16509435 ATCAGATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGATCATTCCCAGTCTAA
Found at i:16510317 original size:26 final size:26
Alignment explanation
Indices: 16510287--16510365 Score: 115
Period size: 26 Copynumber: 3.0 Consensus size: 26
16510277 GTTGACTTAG
16510287 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
16510313 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
16510339 GCATA-TGAAGTTCATTCCAAGTCTAA
1 GCATACAG-AGTTCATTCCCAGTCTAA
16510365 G
1 G
16510366 ATCGGACCGG
Statistics
Matches: 49, Mismatches: 3, Indels: 2
0.91 0.06 0.04
Matches are distributed among these distances:
25 1 0.02
26 48 0.98
ACGTcount: A:0.30, C:0.24, G:0.18, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16511262 original size:26 final size:26
Alignment explanation
Indices: 16511226--16511275 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
16511216 TGACTTAGGC
*
16511226 ATACGGAGTTCATTCCCAGTCTAAAG
1 ATACGGAGTTCATTCCCAATCTAAAG
16511252 ATACGGAGTTCATTCCCAATCTAA
1 ATACGGAGTTCATTCCCAATCTAA
16511276 GATTGGATAG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.24, G:0.16, T:0.28
Consensus pattern (26 bp):
ATACGGAGTTCATTCCCAATCTAAAG
Found at i:16512153 original size:26 final size:26
Alignment explanation
Indices: 16512123--16512175 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16512113 GTTGACTTAG
* *
16512123 GCATACGAAGTTCGTTCCTAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
16512149 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16512175 G
1 G
16512176 ATCAGATTCG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:16513040 original size:26 final size:26
Alignment explanation
Indices: 16513004--16513054 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16512994 TGACTTAGGC
16513004 ATACAGAGTTCATTCCCAGTCTAAGT
1 ATACAGAGTTCATTCCCAGTCTAAGT
*
16513030 ATACGGAGTTCATTCCCAGTCTAAG
1 ATACAGAGTTCATTCCCAGTCTAAG
16513055 ATCGAACTAG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.24, G:0.18, T:0.29
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAGTCTAAGT
Found at i:16516126 original size:26 final size:26
Alignment explanation
Indices: 16516097--16516149 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16516087 GTTGACTTAG
16516097 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
** *
16516123 GCATAGGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16516149 G
1 G
16516150 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16517125 original size:895 final size:892
Alignment explanation
Indices: 16515175--16520518 Score: 6871
Period size: 888 Copynumber: 5.9 Consensus size: 892
16515165 GGTCACAAAA
* *
16515175 TCATTTCGTGGGTTGACTTAGGCATACAAAGTTCATTC-CTAGTCTAAGCATAAGGAGTTCATTC
1 TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTC-AGTCTAAGCATACGGAGTTCATTC
* *
16515239 CCAGTCTAAGATCAGACCGAACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
65 CCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * * *
16515304 GCTGCATTTTTCTTCGTCGAGGCACCATCGCCAGAGCATCGTCAGAGAACCTGACCGACGGCATT
130 GCCGCATTTTTCTTCGTCGGGGCACCATC-CC-GAGCATCATCGGAGAACCTGACCGACGGCATT
* * * *
16515369 GGGGTTTCGGCGATCGAGGGGGCCGGGGGGGGTTGTGCGCATGATGTGCGATTGGTGCTGATACT
193 GGGGTTTCGGCGATCG-GGGGGCC-GGGGGGGTTGCGCACATGATGTGCGATGGGTGCTGGTACT
* *
16515434 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACT-TCACCCCCTTAAAGAGCAC
256 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCAT
* * *
16515498 TTGATATTTTACAGGTTTGCTGACAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTATTCAA
321 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
* * * * * *
16515563 ATGGTCACAGAATATTGTACACTTCGATTTTTTAGCTGAATTTTTTTGTGCACGCCACCAAAAAT
386 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAAT
* * **
16515628 ACAAGGATCACGTCTACCAGGTTTGGGGCC-AAACTCCTTCCGAAAAAATTTTAAAAAATCCCAA
451 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGA
* *
16515692 ACTGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGT
516 ACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* * *
16515757 GACGACTTAAGGGACCATTGTATGAATTTACAACCCATAAAAATGGCATTGGCACATAGAAATAT
581 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATAT
* * **
16515822 GAGGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTATCTCTCTGGC
646 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
*
16515887 CGGCGTAGTGCACGCACGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
711 CGGCGTAGTG--C-C-CGCCCG--C-CCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * *
16515952 TTCCCAATCTAAGA-CTGGATCGGACCGAGGGTTGTGGCAGCAAGATCGGCAGCACGCAGAGGGG
769 TTCCCAGTCTAAGATC-AGATCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGG
* * * * * *
16516016 GACCCGACCGATCCTCGGCTTGCACATCCCGCCCCTCTGGCCGACTGAGCGCTCGTACTC
833 GACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGC
* * * *
16516076 TCGTTCCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATAGGGAGTTCATTCC
1 TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTCAGTCTAAGCATACGGAGTTCATTCC
* * * * *
16516141 TAGTCTAAGATCGGACCAGACCGAGGGTTGCGGAAGCACATGCTGGGCTAGGGCATGTGCTGGTG
66 CAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
** * *
16516206 TTGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCATCGAAGAACCTGACCGACGGCATTT
131 CCGCATTTTTCTTCGTCGGGGCACCATC-CC-GAGCATCATCGGAGAACCTGACCGACGGCATTG
** *
16516271 GGGTTTCGGCGATCGGGGGGCCCGGGGGGGTTTTGCACATGATGTGCGATGGGTGCTGGTAGTTG
194 GGGTTTCGGCGATCGGGGGG-CCGGGGGGGTTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
* * * *
16516336 GCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCAAGAACTCATACCCCTTTAAAGACCATTT
258 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTT
*
16516401 GAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
323 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
*
16516466 GGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATAC
388 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATAC
* * * *
16516531 AAGGATCACGTCTGCCAAGTTTGGTGCCAAAACTTCTTCTGAAAAAATTTTAAAAAATCTTGAAC
453 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGAAC
* * **
16516596 CGTAAAAAGTTTTAAAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
518 CGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * * *
16516661 AGCCTTAAGGGACCATTGTATAAATTTACAAGCCATAAAAATGGCATTGACACATAGAAATGTGA
583 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGA
* *
16516726 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCATCTCTCTGGCCG
648 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * * * * ** * *
16516791 ACGTAGTTCCCGCTCGCCCGCTCGTTTCATTAGTCGACTTAGGCATACGGAGTTCATTCCCAGTC
713 GCGTAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * * * * * *
16516856 TAAGATCCGATCGGACTGAGGGTTGCGGTAGCAGGATCGGCAGCATGCAGAGGGGGACCCAACCA
778 TAAGATCAGATCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGATCG
* * *
16516921 ATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTAAGCGCCCGCACGC
843 ATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGC
* * * * *
16516971 TTATTTCGTGTGTTGACTTAGGCATACGGAGTTTATTCTCAGTCCAAGCATACGGAGTTCATTCC
1 TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTCAGTCTAAGCATACGGAGTTCATTCC
* * * * * *
16517036 CAGTCTAAGATCAGACTGGATCGAGGTTTGTGGCAGCACATGCTAGGTTCGGGCATGTGCTGGTG
66 CAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* * * ** *
16517101 CCGTATTTTTCTTCGTCAGGGCACCAT--C--G-----TCGGAGAACCTGATCGGTGGCATTAGG
131 CCGCATTTTTCTTCGTCGGGGCACCATCCCGAGCATCATCGGAGAACCTGACCGACGGCATTGGG
* ** * *
16517157 GTTCCGATGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTAGTACTTGGC
196 GTTTCGGCGATCGGGGGGCCGGGGGGGT-TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGC
*
16517222 CCTTATATTTGCCCCCTATCCCTCATCAAACCTCAAGAACTCACA-CCCCTGTAAAGAGCATTTG
260 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCT-TAAAGAGCATTTG
* * *
16517286 AGATTTTACATGTTTGCTGCCTGTAGCCATTAAAGGGTCTGAAATGGGGACACTTTTTTCAAATG
324 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
** * * * *
16517351 GTTGCAAAATCTTGCACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCTACAAAAATAAA
389 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACA
* * * * * **
16517416 AGTATCACATCAACAAAGTTTGGGGCCAAAACGCCTTCCAAAAAAATTTTAAAAAATCCTGAACC
454 AGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGAACC
* * * *
16517481 ACAAAAAGTTTCGAAAATCATGAAAAATAGAAAATGAGTTGTCTTGCCATGAAACTTCACGTGAA
519 GCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* * * * *
16517546 GGCTTAAGGGGCCATTGTATGAATTTACAAGCCATAAAAATGGCACTCGCACGTAGAAATATAAA
584 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAA
* *
16517611 GATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTATGGCCGG
649 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
16517676 CGTAGTGCCCGCCCACCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
714 CGTAGTGCCCG----CCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * *
16517741 GTCTAAGATTC-GATCAGACCGAGGGTTGCGGCAGCAAGATTGACAGCACACAGAGGGGGACCCG
775 GTCTAAGA-TCAGATCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCG
*** * * *
16517805 ATCGATCCTAAGCTT-CAGCATCTCACCCCTCTGGCCGACTGAGCGCCCGTACGC
839 ATCGATCCCCGGCTTGC-GCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGC
16517859 TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATT-TCCAGTCTAAGCATACGGAGTTCATTC
1 TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCT-CAGTCTAAGCATACGGAGTTCATTC
* * ** * * * * * * *
16517923 CTAGTCTAAGATCGGACTAGACCAAGGGTTGCGGTAGCACATGCCGGGGTCAGGCAAGCGCTGGT
65 CCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * * *
16517988 GCCGTATTTTTCTTC-ACTGGGGCACCAT--C--G-----TCGGAGAACCTGACCGACGGTAATG
130 GCCGCATTTTTCTTCGTC-GGGGCACCATCCCGAGCATCATCGGAGAACCTGACCGACGGCATTG
* * *
16518043 GGGTTCCGGCGATCGGGGGCCCGGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTG
194 GGGTTTCGGCGATCGGGGGGCCGGGGGGGT-TGCGCACATGATGTGCGATGGGTGCTGGTACTTG
* *
16518108 GCCCTTATATTGGCCCCCTATCCCTCATGAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
258 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTT
*
16518173 GAGATTTTACAGGTTTGCTGCCCGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
323 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* *
16518238 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTTATGCATGCCAACAAAAATAA
388 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATAC
* * * * * *
16518303 AAGGATCATGTCTACCAAGTTTGGGGCCAAAAATCTTTCTGAAAAGATCTTAAAAAATCCCGAAC
453 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGAAC
* * * *
16518368 CGTAAAAAG-TTTCAAAATTCTTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTTACGTG
518 CGCAAAAAGTTTTGAAAA-TCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
** * *
16518432 AAGGCTTAAGGGACCACAGTATGAATTTACAAGCTATAAAAATGGCATTGGCACACAGAAATATG
582 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATG
* *
16518497 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCACTCTGGCC
647 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* *
16518562 GGCGTAGTGCCCGCCCGCCCACTCATTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGT
712 GGCGTAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * * * * * * *
16518627 CTAAGATTAGACCGGACTGAGGGTTGCGGCAGCA-AATTTGGCAGCACGTAGTGGGGGACCCGGT
777 CTAAGATCAGATCGGACCGAGGGTTGCGGCAGCAGGA-TCGACAGCACGCAGAGGGGGACCCGAT
* * * *
16518691 CGATCCCCGGCTTGCACATCCCGCCCCTCTGGTCGACTGAGTGCCCACACGC
841 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGC
* * * * * *
16518743 TCGTTTCGGGGGTTGACTTAGGCATACGGAGTTTATTCCCAGTCTAAGCATAGGGAGTTCATTCC
1 TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTCAGTCTAAGCATACGGAGTTCATTCC
* * * *
16518808 CAGTCTAAGATCGGACCGGATCGAGGGTTCCGGCAGCACATTCTGGGCTCGGGCATGTGCTGGTG
66 CAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* * * *
16518873 CCGCATTTTTTTTCGTCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGACCGGCGACATTG
131 CCGCATTTTTCTTCGTCGGGGCACCATC-CC-GAGCATCATCGGAGAACCTGACCGACGGCATTG
* *
16518938 GGGTTTCGGCGATCAGGGGGGCCGAGGGGTTGTGCGCACATGATGTGCGATGGGTGCTGGTACTT
194 GGGTTTCGGCGATC-GGGGGGCCGGGGGGGT-TGCGCACATGATGTGCGATGGGTGCTGGTACTT
* * * **
16519003 TGCCCTTATAGTGGCCCGCTATCCCTCATCAAACCTTGAGAACTCACA-CCCCTTAAAGAGCATT
257 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATT
* * *
16519067 TGAGATTTTACAAGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAATGGGGACATTTTTTTCAAA
322 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
*
16519132 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTGTTT-TGCATGCCAAAAAAAAT
387 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT-TTTATGCATGCCAACAAAAAT
* *
16519196 ACAAGGATCTCGTCTACAAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGA
451 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGA
* * ** * *
16519261 AACGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCAAGT
516 ACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* *
16519326 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAAAAAAATAT
581 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATAT
* **
16519391 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACGGCTTGCGCATGTCGTCTCTCTGGC
646 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
* * * * *
16519456 CGGTGTAGTGCCCGCCCACCCGTCCGCTCATTTCCTCGGTTCGCTTAGGCATACAGAGTTCATTC
711 CGGCGTAGTGCCCG----CCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * ** * * * * *
16519521 CTAGTCTAAGATCGGATCAGACCGAAAGTTGTGGCAGTAGGATCGACAGCATGTAGAGGCGGACC
772 CCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACC
* * ** * * * *
16519586 CGATCGATCCCCGACTTGTGCATCCTACCCCTTTGGCCGGCTGAGTGCCCGCCCGC
837 CGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGC
**
16519642 TTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTACACATACGGAGTTCATTCC
1 TCATTTCGTGGGTTGACTTAGGCATAC--AG---------AG--T-----T-C--A-TTC--T--
* * ** * * *
16519707 CAGTCTATGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGACAGTTGCTGTATCAC
40 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAC
* * **
16519772 ATGCTGGGCTCGGGCATGTGCTGGTGCCACTTTTTTCTTCACCGGGGCACCATCACCGAAGCATC
105 ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC-CCG-AGCATC
* * * * *
16519837 ATCGGAGAACCTGACCGACAGTATTGGGGTTTTGGCGATCGGGGGGGCTGGGGGGTGTGCGCACA
168 ATCGGAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGGGCCGGGGGGGT-TGCGCACA
* * *
16519902 TTATTTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
232 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAG
* * *
16519967 AACTTACACCCCCTTAAAGAGCACTTGATATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
297 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* * *
16520032 CTGAAATAGGGACACTTTTTTCGAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAAT
362 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * *
16520097 ATTTTTATGGATGCGAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
427 TTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * *
16520162 TGAAAAAATTTTAAAAAATCCTGAACTGCAAAAAGTTTTGAAAATCGTGAAAAAAAGAAAATGAG
492 TGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAG
* *
16520227 TTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAACCCATAAA
557 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
*
16520292 AATGGCATTGGCACATAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
622 AATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * *
16520357 GCTTGCGCATCCTGTCTCTCTGGCCGGCATAGTGCCCTCGTGCCTGCCCGCCCGCTCATTTCATC
687 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG----C---CC-GCCCGCCCGCTCATTTCGTC
* * * *
16520422 GGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCAAGGGTTGCGGCAG
744 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAG
* *
16520487 TAGGATCGACAGCACGCATAGGGGGACCCGAT
809 CAGGATCGACAGCACGCAGAGGGGGACCCGAT
16520519 TGGGGGGGTG
Statistics
Matches: 3871, Mismatches: 494, Indels: 128
0.86 0.11 0.03
Matches are distributed among these distances:
883 16 0.00
884 750 0.19
885 2 0.00
887 9 0.00
888 757 0.20
889 8 0.00
890 1 0.00
892 1 0.00
895 680 0.18
896 100 0.03
898 5 0.00
899 161 0.04
900 86 0.02
901 354 0.09
902 217 0.06
910 2 0.00
912 1 0.00
917 1 0.00
920 1 0.00
921 3 0.00
924 91 0.02
925 523 0.14
929 99 0.03
932 2 0.00
933 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (892 bp):
TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTCAGTCTAAGCATACGGAGTTCATTCC
CAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
CCGCATTTTTCTTCGTCGGGGCACCATCCCGAGCATCATCGGAGAACCTGACCGACGGCATTGGG
GTTTCGGCGATCGGGGGGCCGGGGGGGTTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCC
CTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAG
ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGT
CACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAG
GATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGAACCGC
AAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGA
TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCG
TAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
GATCAGATCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGATCGATC
CCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGC
Found at i:16517916 original size:26 final size:26
Alignment explanation
Indices: 16517880--16517932 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16517870 GTTGACTTAG
16517880 GCATACAGAGTTCATTTCC-AGTCTAA
1 GCATACAGAGTTCA-TTCCTAGTCTAA
*
16517906 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCTAGTCTAA
16517932 G
1 G
16517933 ATCGGACTAG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 4 0.16
26 21 0.84
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCTAGTCTAA
Found at i:16518793 original size:26 final size:26
Alignment explanation
Indices: 16518764--16518816 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16518754 GTTGACTTAG
*
16518764 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16518790 GCATAGGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16518816 G
1 G
16518817 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16519700 original size:26 final size:26
Alignment explanation
Indices: 16519664--16519739 Score: 134
Period size: 26 Copynumber: 2.9 Consensus size: 26
16519654 TTGACTTAGG
16519664 CATACGGAGTTCATTCCCAGTCTACA
1 CATACGGAGTTCATTCCCAGTCTACA
**
16519690 CATACGGAGTTCATTCCCAGTCTATG
1 CATACGGAGTTCATTCCCAGTCTACA
16519716 CATACGGAGTTCATTCCCAGTCTA
1 CATACGGAGTTCATTCCCAGTCTA
16519740 AGATCAGATC
Statistics
Matches: 48, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.25, C:0.29, G:0.17, T:0.29
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAGTCTACA
Found at i:16523301 original size:872 final size:857
Alignment explanation
Indices: 16521186--16525627 Score: 5600
Period size: 860 Copynumber: 5.1 Consensus size: 857
16521176 CCCAGTCTAA
* *
16521186 GCATACGGAGTTCATTCCCAGTCTAAGAT-TGCACCGGA-TCGAGGGTTGCGGCAGCAGGATCGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACT-GAGGGTTGCAGCAGCAGGATCGG
* * * * *
16521249 -TGCCACACAGAGGGGGACCCGACCGATCCTCGGGCTTGCGCATCCTCG-CCCTCTGGCTGGCTA
64 CAG-CACGCAGAGGGGGACCCGACCGATCC-CCGGCTTGCGCATCC-CGCCCCTCTGGCCGGCTG
* * * * *
16521312 AGTGCCCGCACGCTCGTTTTGTGGGTTGACTTAGGCAAACAGAGTTCATTCCCTGTCTAAGATGG
126 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCG
* * *
16521377 GACTGGATCGAGGGTTGCGGCAGCACATGTTGGGCTCGGGCATGTGCCGGTGCCGTATTTTTCTT
191 GACTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTT
* * ** *
16521442 CGTCGGGGCACCAGCATCGCTGGAGAACCTGACCGACGGCATTGGCATTTCGACGATCGGGGGGG
256 CGTCGGGGCA-C--CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGG
* *
16521507 CCGGAGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
318 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCTCTAT
* *
16521572 CCCTCATCAAACTTCGAGAACCCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
382 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
* * * * *
16521636 CAGTAGCAATTAAAGTGTTTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACATT
447 CAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * * *
16521701 TCGAGTTTTTAGCTAAATTTTTTTTTGCGTGCCAAAAAAAATACAAGGATCACGTCTACCAAGTT
512 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
* * * *
16521766 TAGTGCCAAAACTCTTTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTTGAAAATCG
577 TGGAGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTTAAAAATCG
* * * *
16521831 TGAAAAATAGAAAACAAGTAGTCTTGCCATGAAACTTCATGTGAAGGATTAAAGGACCATTGTAT
642 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTAT
* *
16521896 GAATTTACAAGCCCTAAAAATGGCATTGGCACGTAAAAATATGAAGATGTGCCTAAACCCACCTA
707 GAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTA
*
16521961 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCGC
772 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTG-CT---CGCCCGC
* ** *
16522026 CCGTTCGTTTAATCGATTGGCTTAG
833 CCGCTCGTTTCGTCGGTTGGCTTAG
* * * * *
16522051 GCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGAACTGAGGGTTGCGGTAGCAGGATCGGCA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCAGCAGCAGGATCGGCA
* * * *
16522116 GCACGCAGATGGGGACCCGACCGATCCCCAGCTTGCGTATCTCGCCCCTCTGGCCGGCTGAGCGC
66 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* ** * * *
16522181 CTGTGCGCTCGTTCCGTGGGTTGACTTAGGCATACAGATTTCATTCCCAGTCTAAGATTGGA-TC
131 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACT-
*** * **
16522245 GGACCGAGGGTTATAGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC
195 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTC
**
16522310 GGGGCACCATCGCCAGAGCATCCTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGATG
260 GGGGCACCAT---C---G---CC-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGG
* * *
16522375 GGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGCGCTAGTACTTGGCCCTTATATTGGCCCCT
315 GGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTC-
* *
16522440 TCTCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
379 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* * *
16522505 TACCAGTAGCCCTTAAAGTGTCTGAAATAGGGACATTTTTTTCAAATGGTCACAAAATCTTGTAC
444 TGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * *
16522570 ACTTCGAGTTTTTAGTTGAATTTTTTTGTGCTTGCCAACAAAAATACAAGGATCATGTCTACCAA
509 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAA
* ** * *
16522635 GTTTGGAGCCAAAACTCCTTCCGAAAAAATTTTTAAAAATCCCAAACGGCAAAGAGTTTTGAAAA
574 GTTTGGAGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTTAAAAA
** * * * * *
16522700 TTATGAAAAATAGAAAACGAGCCGTCTTGCCATGAAGCTACATGTGAAAGCTTAAGGGACCGTTG
639 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTG
* * * *
16522765 TATGAATTCATAAGACATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGTCTAAACCCAC
704 TATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCAC
* * * * *
16522830 CTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGTCGGCATAATGCTCGCTCGTC
769 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCTCGCCCGCC
16522895 CGCTCGTTTCGTCGGTTGGCTTAG
834 CGCTCGTTTCGTCGGTTGGCTTAG
** * * *
16522919 GCATACGGAGTTCATTCAAAGTCTAAGATCAGACCGGACCGAGGGCTGCACCAGCAGGATCGGCA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCAGCAGCAGGATCGGCA
* * * *
16522984 GCACGAAGAGGGGGACCCGACCGATCCCCGACTT-CTGCATCCCGCCCCTCTGGCCGACTGAACG
66 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGC-GCATCCCGCCCCTCTGGCCGGCTGAGCG
*
16523048 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACT
130 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACT
* *
16523113 GGACTGAGGGTTGCGGCAGCACTTGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTC
195 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTC
* * * * *
16523178 GGGGCACCATTGCCGGAGAACCTGACCGGCGGCATTGGTGTTCCGACGATCGAGGGTGCTGGCGG
260 GGGGCACCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GG
** * * *
16523243 GGTGTAAGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCTCTCA
324 GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTC-TATCCCTCA
* *
16523308 TCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTAG
388 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
*
16523373 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
453 CCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
* * *
16523438 TTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAAATACAAGGATCACGTCTACCAATTTTGCAG
518 TTTTAGCTGAATTTTTTTGTGCATGCC-AACAAAAATACAAGGATCACGTCTACCAAGTTTGGAG
* * * * * *
16523503 CTAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATCATGAAA
582 CCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTTAAAAATCGTGAAA
* * *
16523568 AATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAATGGACCATTGTATGAATT
647 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATT
* * *
16523633 TACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCCAAACCCACCTACCACC
712 TACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * ** * *
16523698 CTATCGATCCACTGCTTGCGCATCCCGTCTCTCTCGCCAG-AGTAGTGCCCGCCCGTGCACTTGT
777 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCA-TAGTGCTCGCCCGCCCGCTCGT
*
16523762 TTCGTCGGTTGGATTAG
841 TTCGTCGGTTGGCTTAG
* *
16523779 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCAGCAGCAGCATCGACA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCAGCAGCAGGATCGGCA
** ** * * *
16523844 GCACGCAGAGGGGGATTCGGTCGTTCCCCGGCTTGCGCATCCCGCCCTTCTGGCCGGTTGAGCGC
66 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* *
16523909 CCACACGCTCGTTTTGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATATGGAG
131 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAG--T---C-TA---AG
16523974 TTCTTTCCCAATCTAAGATCAGACTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATG
187 ----------ATC---G----GACTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATG
** * * *
16524039 TGCTGGTGATGTATTTTTCTTCGTCGGGGCACCATTGCCGGAGAACTTGACCGGCGGTATTGGGG
235 TGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGAACCTGACCGGCGGCATTGGGG
* * * *
16524104 TTCCGACGATCGGGGGGGCCAGACGGGGAGTGTGCACATGATGTGCGATGGGTGGTGGTACTTGG
300 TTCCGACGATCGGGGGGGCC-G-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
16524169 CCCTTATATTGGCCTTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
363 CCCTTATATTGGCC-TCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
*
16524234 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAAT-GAGGACAC-TTTTTCAAAT
427 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAG-GGACACTTTTTTCAAAT
* * *
16524297 GGTCACAGAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAACAAAAATAC
491 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
* * ** * * *
16524362 AATGATCACGTCTACCATGTTTAGG-GTTAAAACTCCTTCCAAAAAAATTTAAAAAAATCCCGAA
556 AAGGATCACGTCTACCAAGTTT-GGAGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAA
* * * *
16524426 CC-CGAAAAAGTTTCAAAAGTCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGA
620 CCAC-AAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGT
* *
16524490 GAAGGCTTAAGGTGGCCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATA
684 GAAGGCTTAAGG-GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATA
* * * **
16524555 TGAAGATGTGCCTAAACCCACCTACCACGCTATCGATCCAC-ACTTGAGCATCTTGTCTCTCTGG
748 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
* *
16524619 CCGGCGTAGTGCCTGCCCGCACGCTCGCCCACTCGTTTCGTCGGTTGGCTTAG
813 CCGGCATAGTG-CT---CG--C-C-CGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * ** * * * * *
16524672 GCATACGGAGTTCATTCACAGTCTAACATTAGACCATACTGAGCGTTGCGGTAGCAGGATTGGTA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCAGCAGCAGGATCGGCA
* * * *
16524737 GCACGTAGAGGGGGACCCG-CTCGATCCCCGGCTTGCACATCCCG-----C---CCGACTGAGCA
66 GCACGCAGAGGGGGACCCGAC-CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* *
16524793 CCCACACGCTCGTTTCATGGGTTGACTTAAGCATACGGAGTTCTTTCCCAGTCTAAGCATATGGA
130 CCCGCACGCTCGTTTCGTGGGTTGAC-T-----TA--G-G--------CA---T-A-C--A--GA
* * * *
16524858 GTTCATTCCCAGTCTAAGATTGGA-TCAGACCGAGGGTTGCGGTAGCACATGCTGGGCTCGAGCA
169 GTTCATTCCCAGTCTAAGATCGGACT-GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCA
* * * * * *
16524922 TGTGCTGGTACCGCATTTTTCTTCATCGGGGCACCATCACCGAAGAACCTGACCGGCGGTATTGG
233 TGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGAACCTGACCGGCGGCATTGG
*
16524987 GGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCATATGATGTGCGATGGGTGCTGGTACTTGG
298 GGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
* *
16525052 CCCTTATATTGGCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGAATCTGA
363 CCCTTATATTGGCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
* *
16525117 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAAGGACACGTTTTTCAAATGG
428 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGG
*
16525182 TCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTTTTTGTGCATGCCAACAAAAATACAA
493 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
* * * *
16525247 GGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCAAACCG
558 GGATCACGTCTACCAAGTTTGGAGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCA
* *
16525312 CAAAAAGTTTCAAAAATGGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAG
623 CAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAG
* * * *
16525377 GCTTAAGGGACCATTGTATGAATTCACAAGCCATAAAAATGGCACTGGAAAGTAGAAATATGAAG
688 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAG
*
16525442 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCTGGC
753 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGC
* * *
16525507 ATAATGCTCGCCCGCCTGCTCGTTTCATCGGTTGGCTTAG
818 ATAGTGCTCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * * *
16525547 GCATACGGAGTTCATTTCGAGTCTAAGATCGGACCAGACTGAGGGTTGCAGTAGCAGGATCGGTA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCAGCAGCAGGATCGGCA
16525612 GCACGCAGAGGGGGAC
66 GCACGCAGAGGGGGAC
16525628 TCGTCGGGGC
Statistics
Matches: 3123, Mismatches: 356, Indels: 186
0.85 0.10 0.05
Matches are distributed among these distances:
858 44 0.01
859 211 0.07
860 426 0.14
861 4 0.00
862 2 0.00
863 4 0.00
864 144 0.05
865 80 0.03
866 5 0.00
867 2 0.00
868 258 0.08
869 3 0.00
870 5 0.00
871 119 0.04
872 375 0.12
875 95 0.03
876 1 0.00
877 1 0.00
879 5 0.00
882 189 0.06
883 271 0.09
884 4 0.00
885 305 0.10
886 271 0.09
887 146 0.05
888 2 0.00
889 3 0.00
891 3 0.00
892 3 0.00
893 115 0.04
894 1 0.00
902 4 0.00
905 3 0.00
906 2 0.00
907 1 0.00
909 2 0.00
911 14 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (857 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCAGCAGCAGGATCGGCA
GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACTG
GACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCG
GGGCACCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGG
TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCTATCCCTCATCA
AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
TTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGAGCCAA
AACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTTAAAAATCGTGAAAAATA
GAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
AGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCTCGCCCGCCCGCTCGTTTCGT
CGGTTGGCTTAG
Found at i:16524858 original size:26 final size:26
Alignment explanation
Indices: 16524820--16524875 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
16524810 TGGGTTGACT
*
16524820 TAAGCATACGGAGTTCTTTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
*
16524846 TAAGCATATGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
16524872 TAAG
1 TAAG
16524876 ATTGGATCAG
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.27, C:0.23, G:0.20, T:0.30
Consensus pattern (26 bp):
TAAGCATACGGAGTTCATTCCCAGTC
Found at i:16527075 original size:26 final size:26
Alignment explanation
Indices: 16527045--16527095 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16527035 GTTGACTTAG
16527045 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
16527071 GCATATGGAGTTCATTCCCAGTCTA
1 GCATATGGAGTTCATTCCCAGTCTA
16527096 TGATCAGACC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.24, G:0.20, T:0.31
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGTCTAA
Found at i:16527264 original size:26 final size:26
Alignment explanation
Indices: 16527230--16527282 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16527220 GTTGTCTTAG
* *
16527230 GCATACGGATTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16527256 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16527282 G
1 G
16527283 ATTGGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16528173 original size:26 final size:26
Alignment explanation
Indices: 16528133--16528184 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16528123 TTGACTTAGC
16528133 CATACGGAGTACATTCCCAGTCTAAG
1 CATACGGAGTACATTCCCAGTCTAAG
*
16528159 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACGGAGTACATTCCCAGTCTAAG
16528185 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.19, T:0.25
Consensus pattern (26 bp):
CATACGGAGTACATTCCCAGTCTAAG
Found at i:16528835 original size:904 final size:904
Alignment explanation
Indices: 16527071--16532333 Score: 6825
Period size: 903 Copynumber: 5.8 Consensus size: 904
16527061 CCCAGTCTAA
* * * * * * * * * **
16527071 GCATATGGAGTTCATTCCCAGTCTATGATCAGACCGGACTGCGGGTTACGGGAGTAGGACCGGTA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATCGACA
* * ** * * *
16527136 GCACACAGAGAGGGACCCGGCCGATCCTCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGTGC
66 GCATACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* * * *
16527201 CCGCACGCTCATTTCGTGGGTTGTCTTAGGCATACGGATTTCATTCCTAGTCTAAGCATACGGAG
131 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* ** * * *
16527266 TTCATTCCCAGTCTAAGATTGGACTGGACTGAGGGTTGCGGCAGCACATGCTGGGCTTGGGCATG
196 TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATG
* * * * * * **
16527331 TGCTGGTGCTGCATTTTTCTTCACCGGGGCACCACCGCCGGAGCATCGCTAGAGAACCTGACCGA
261 TGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGA
* * * * *
16527396 CAGCATTGGGGTTTCGGCGATCGGGGGGGCC-A-GGGGGTGTCCGCACATAATGTGCGATGGGTG
326 CGGCATTGGGGTTCCGACGATC-GGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGGGTG
*
16527459 CTGGTACTTGGCCCTTATATTGGGCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
390 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* * * *
16527524 AAGAGCATTTGAGATTTTACAAGTTTGCTACCAGTAGCCATTAAAGTGTTTGAAATGGGGACGCT
455 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* *
16527589 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGTTGAATTTTTTTGTGCATGCCA
520 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * * *
16527654 AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGGCACAACACCTTCCGAAAAAATTTAAAAA
585 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * ** *** ** *
16527719 AATTCTGAACCACAAATTTTTTTTAAAATCGTGAAAAATAGAAAACGAGTCTTCTTGCCATGAAA
650 AATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * *
16527784 CTTCACGTGAAGGCTTAAAGGACCATTGTA-GGATATTACAAGCCACAAAAATGGCATTGGCACG
715 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT-TTACAAGCCATAAAAATGGCATTGGCACG
* * * * *
16527848 TAGAAATATGAAGATGTGCCTAAATCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CTGT
779 CAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGT
* * * * * * * * **
16527912 CTCTCTGGCCAGTGTAGTGCCCGCCCGTCTGCCCGCCTGCTTGGTTCATCGATTTTCTTAG
844 CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAG
* ** * * * * *
16527973 GCATACGGAGTTCATTCCCAGTCTAAGATCCGATTGGACTGAAGGTTGTGACAGCAGCATCGGCA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATCGACA
* * * * *
16528038 GCATGCAGAGGGGGACCCGATCGATCCTCAGCTTACGCATCCCGCCCTTCTGGCCGGCTGAGCGC
66 GCATACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* * * *
16528103 CTGCACGCTCGTTTCTTGGGTTGACTTAGCCATACGGAGTACATTCCCAGTCTAAGCATACGGAG
131 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* * * *
16528168 TTCATTCCCAGTCTAAGATCGGACCAGACCGATGGTTACGACAGCACATGCTAGGCTCAGGCATG
196 TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATG
* * * *
16528233 TGCTGGTGCCGTATTTTTCTTCATCGGGGCTCTATCATCGGAGCATCACTGGAGAACCTGACC-A
261 TGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGA
* *
16528297 GTGGCATTGGGGTTCCGACGATCGGGAGGGCCGAGGGGGGTGTGCGCACATGATGTGCAATGGGT
326 -CGGCATTGGGGTTCCGACGATCGGG-GGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGGGT
* *
16528362 GGTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
389 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* *
16528427 AAAGAGAATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACAC
454 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
16528492 TTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTGGCTGAATTTTTTTGTGCATGCC
519 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* * * ** *
16528557 AACAAAAATAAAAGGATCATGTCTACCATGTTTGGGGTAAAAACTCCTT-CAAAAAAATTTTAAA
584 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* *
16528621 AAATCCCGAACCGTAAAATGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
649 AAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* *
16528686 ACTTCACGTGAAGGCTTATGGGATCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
714 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
* * *
16528751 TAGAAATATGAAGATGTGCCTAAACCCACCTACCACTCTATCGATCCAAGGCTTGCGCATCCCGT
779 CAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGT
* * * * * *
16528816 CTCTCTTGCCGACGTAGTGCCTGCCCACCCGTCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
844 CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAG
** * *
16528877 GCATACGGAGTTCATTCCCA--CT--G----GAT----C-GAGGGTTGCAACAGCAGGATTGGCA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATCGACA
* * * *
16528929 GCATGCAGAGGGGGACCC-AGTCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGTCGACTGAGCG
66 GCATACAGAGGGGGACCCGA-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * *
16528993 CCCGCATGCTCGTTTCATGGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGA
130 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * ** ** *
16529058 GTTGATTCCCTGTCTAAGATCGGACCGGACCAAGGGTTTTGGTAGCACATGCTGGGCTTGGGCAT
195 GTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* * * *
16529123 GTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCGTCGCCGGAGCATCGCCGGAGAACCTGACCG
260 GTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCG
* * ** ** * * *
16529188 GCGACATTGGGGTTCCGGTGATCGGGGGGTTGGGGGGCGGGTGTGCACACATGATGTGTGATGGG
325 ACGGCATTGGGGTTCCGACGATCGGGGGG-CCGAGGG-GGGTGTGCGCACATGATGTGCGATGGG
*
16529253 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCTCT
388 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* *
16529318 TAAAGAGCATTTGAGATTTTACAGCTTTGCTGTCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
453 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
*
16529383 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA-CTTGAAATTTTTTGTGCATG
518 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC-TGAATTTTTTTGTGCATG
* * * * *
16529447 CCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCCACAACTCGTTCTGAAAAAATTTTA
582 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTA
* * *
16529512 AAAAATCCCGAACCCTAAAAAGTTTCAAAAATCGTGAAAAATAGAGAATGAGTCGTCTTGCCATG
647 AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
16529577 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
712 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* **
16529642 CACAAAAATATGAAGATGTGCCTAAACCCACCTACCACTTTATC-ATTCCACA-GCTTGCGCATC
777 CGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA-TCCA-AGGCTTGCGCATC
* * * * * * * *
16529705 TCGTCTCTCTGGCTGGTGTAGTGTCCGCCCGCCCGCCCGCCAGCTCATTTCCTCAGTTGGCTTAG
840 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAG
* * * * *
16529770 GCATACGGAGTTCATTCCTAGTCTAAGATCAGATCAGATTGAGGGTTACGGTAGTAGGATCGACA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATCGACA
* * * *
16529835 GCACACAGAGGGGGACCCGACCAATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCGC
66 GCATACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* * *
16529900 CCGCAAGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACAGAG
131 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* * * * **
16529965 TTCATTCCCAATCTAAGATTGGA-TAGGACCGAGGGTTGCGATAGCACATTTTGGGCTCGGGCAT
196 TTCATTCCCAGTCTAAGATCGGACCA-GACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* * *
16530029 GTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCAGAGAACCTGATCG
260 GTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCG
* ** *
16530094 GCGGCATTAAGGTTCC-AGCGATCGGGGGGGCC-A-GGGGGTGTGCGCACATGATGTGTGATGGG
325 ACGGCATTGGGGTTCCGA-CGATC-GGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGGG
* *
16530156 TGCTGGTACTTGGCCCTTAGATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCT
388 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* * *
16530221 TAAAGAGCATTTGAGATTTTACAAGTTTGCTGACAGTAGCCATTAAAGTGTCTTAAATGGGGACA
453 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * *
16530286 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTAGAGTTTTTAGTTGAATTTTTTTGCGCATGC
518 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
*
16530351 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACCCCTTCC-AAAAAGATTTTA
583 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA-ATTTTA
* * *
16530415 AAAAATCACGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
647 AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
*
16530480 AAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
712 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * * * *
16530545 TGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGGTCCATGGCTTGCGCATCCT
777 CGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCC
* * * * *
16530610 ATCTCTCTGGGCGGCATAGTGCCCGCCTGCCCGCCCTCCCGCTCGTTTCATCGGTTGGCTTAG
842 GTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAG
** * * * *
16530673 GCATATAGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGCGGCAGCAAGATTGACA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATCGACA
* * * * * * ** * *
16530738 GCATACAGAGAGAGACTCGATCGATGCTCGACTTGCGCATCCCGCCCCTCTGGTTTGGGTAAGCG
66 GCATACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG-CCGGCTGAGCG
* *
16530803 CCCGTACGCTCCTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCTAGTCTAAGCATAAAGA
130 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC-G-G---------AGT-T---C-------
*
16530868 GTTTATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG
173 ----ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG
* * * * *
16530933 CGACATCACATGCTGGGCTCAGGCATGTGCTGGTGCCATATTTTTCTTCGTCGGGGCACTATCGT
234 CGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGT
* * * * * * * *
16530998 TGGAGCACCGCCGGAGAACCTGGCTGACGACATTAGGGTTCTGACGATCGTGGGGGCCG-GGGGG
299 CGGAGCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCCGAGGGGG
* * * * * *
16531062 GTGTGCGCACACGATGTGCAATGTGTGTTGGTACTTGGCCCTTATATTGGCCCCTTATCTCTCAT
363 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
* *
16531127 CAAACCTCTAGAACTCACACTCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
428 CAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
* *
16531192 CACTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTT
493 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
* * * * *
16531257 TTCAGCTGAATTTTTCTGTGCATGCCAAGAAAAATACAAGGATCACGTCTACGAAGTTTAGGGCC
558 TTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
* *
16531322 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCGGAACCGTAAAAAGTTTTAAAAATCGTGAAAAA
623 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAA
* *
16531387 TAGAAAATGAGTCGTCTTGCCATTAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
688 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * * *
16531452 CAAGCCATAAAAATGGCA-TAGCATGCAAAAATATGAAGATGTGCCTAGACCCACCTAGCACCCT
753 CAAGCCATAAAAATGGCATTGGCACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * *
16531516 ATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCTGGCGTAGTGCCTGCCCGCCCGCACGCCCA
818 ATCGATCCAAGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCG
** *
16531581 CTTATTTCGTCGGTTGGCTTAG
883 CTCGTTTCATCGGTTGGCTTAG
* * *
16531603 GCATACGGAGTTCATTCCCAGTCTAAAATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCGACA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATCGACA
* * *
16531668 GTACATA-A-AGGGGG-CCCGA-CTGATCCCCGGCTTGCGCATCCCACCCCTCTGGTCGGCTGAA
66 G--CATACAGAGGGGGACCCGATC-GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
*
16531729 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTGATTCCCAGTCTAAGCATACG
128 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * * *
16531794 GAAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGCAACAGCACATGCTAGGCTCGGG
193 G-AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGG
* *
16531859 CATGTGTTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGAAGCATCACCGGAGAACCTGA
257 CATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGA
* * * * * *
16531924 CCGACGGCGTTGGGGTTCCGGCGATCGGGGGGCTG-GGGGGCTGTGCGCACATCATGTGCGATAG
322 CCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGG
* **
16531988 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTTATGCCCCC
387 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
* *
16532053 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAATGGGGAA
452 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
* *
16532118 ACTTTTTTCAAATTGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
517 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* * * * * *
16532183 CCAACAAAAATACAAAGATCATGTCTGCCAAGTTTGGGGCCAAAATTCCTTCTGAAAAAATTTTC
582 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTA
*** *
16532248 AAAAATCTTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
647 AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
*
16532313 AAACTTCACGTGAAAGCTTAA
712 AAACTTCACGTGAAGGCTTAA
16532334 ACCCACCTAC
Statistics
Matches: 3796, Mismatches: 493, Indels: 144
0.86 0.11 0.03
Matches are distributed among these distances:
890 4 0.00
891 270 0.07
892 250 0.07
893 260 0.07
894 1 0.00
895 2 0.00
896 3 0.00
897 1 0.00
900 1 0.00
901 7 0.00
902 663 0.17
903 905 0.24
904 364 0.10
906 258 0.07
907 7 0.00
915 3 0.00
916 2 0.00
917 3 0.00
919 1 0.00
926 1 0.00
927 1 0.00
928 42 0.01
929 32 0.01
930 329 0.09
931 377 0.10
932 9 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (904 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATCGACA
GCATACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATG
TGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGA
CGGCATTGGGGTTCCGACGATCGGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
ATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCA
AAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCT
CTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAG
Found at i:16529053 original size:26 final size:26
Alignment explanation
Indices: 16529023--16529075 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16529013 GTTGGCTTAG
16529023 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* * *
16529049 GCATATGGAGTTGATTCCCTGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16529075 G
1 G
16529076 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.23, G:0.23, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16529965 original size:26 final size:26
Alignment explanation
Indices: 16529929--16529981 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16529919 GTTGACTTAG
*
16529929 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
16529955 GCATACAGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
16529981 G
1 G
16529982 ATTGGATAGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.26, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:16530869 original size:26 final size:26
Alignment explanation
Indices: 16530833--16530911 Score: 106
Period size: 26 Copynumber: 3.0 Consensus size: 26
16530823 GTTGACTTAG
* *
16530833 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATAAAGAGTTCATTCCCAGTCTAA
*
16530859 GCATAAAGAGTTTATTCCCAGTCTAA
1 GCATAAAGAGTTCATTCCCAGTCTAA
*
16530885 GCAT-ACGAAGTTCATTCCCAGTCTAA
1 GCATAAAG-AGTTCATTCCCAGTCTAA
16530911 G
1 G
16530912 ATCGGACCAG
Statistics
Matches: 47, Mismatches: 5, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
25 2 0.04
26 45 0.96
ACGTcount: A:0.32, C:0.23, G:0.16, T:0.29
Consensus pattern (26 bp):
GCATAAAGAGTTCATTCCCAGTCTAA
Done.