Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167917.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56758

Tables:   1   

This is table  1  of  1  ( 72 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8005--9052
50
21.6
49
81
7
1121
27
12
22
37
1.90
8005--9052
98
10.8
98
81
8
1117
27
12
22
37
1.90
8054--9061
386
2.6
387
85
5
1310
27
12
22
37
1.90
9300--9329
12
2.5
12
94
0
51
76
13
0
10
1.01
9321--9363
22
2.0
22
90
0
68
81
6
6
4
0.98
9240--9355
58
2.0
57
81
5
135
72
8
4
14
1.24
10301--10325
10
2.5
10
100
0
50
16
0
8
76
1.02
13937--14177
119
2.0
118
93
3
414
48
3
11
36
1.56
14893--14969
7
10.3
7
75
18
57
20
1
2
75
1.00
14896--14972
38
2.0
38
82
9
95
22
2
2
72
1.09
14890--15167
20
14.5
19
68
19
111
26
3
2
67
1.17
14955--15167
3
66.7
3
71
21
91
29
3
1
65
1.21
14895--15014
33
3.5
35
70
23
87
24
1
1
72
1.03
14943--15162
46
4.5
48
75
17
127
29
3
2
65
1.22
14962--15120
28
6.1
28
75
22
136
32
3
1
62
1.21
14962--15117
81
2.0
78
83
11
201
32
3
1
62
1.22
15038--15120
23
3.4
24
85
11
107
34
3
0
61
1.13
15136--15176
12
3.3
12
86
3
55
14
2
2
80
0.92
16128--16255
68
1.9
68
82
6
161
42
3
10
44
1.54
16198--16345
55
2.6
57
82
10
178
41
6
14
38
1.70
16198--16362
58
2.9
53
78
13
161
42
6
13
37
1.70
16996--17027
13
2.5
13
94
0
55
21
34
15
28
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20312--20370
20
2.9
20
75
12
66
76
0
16
6
1.00
22007--22334
42
8.0
41
85
7
380
25
17
21
36
1.94
22592--22752
14
11.4
14
68
19
68
27
3
2
65
1.22
22591--22665
16
4.8
16
70
18
59
26
1
1
70
1.03
22592--22752
3
50.7
3
68
20
55
27
3
2
65
1.22
22655--22711
30
1.9
30
85
7
80
33
3
5
57
1.38
22720--22754
8
4.2
8
88
3
52
20
2
0
77
0.90
22717--22758
20
2.1
20
82
8
50
19
2
0
78
0.86
23290--23329
20
2.0
20
90
9
64
47
0
52
0
1.00
23646--23696
5
9.8
5
79
12
50
15
3
1
78
0.99
23645--23696
16
3.2
16
78
10
61
15
3
1
78
0.98
23718--23829
59
1.9
58
89
5
172
42
6
14
36
1.71
25788--25880
48
1.9
48
89
4
143
61
11
6
20
1.52
29849--29971
8
15.2
8
70
13
65
80
1
9
8
0.97
29890--29959
11
6.3
11
75
9
70
84
0
11
4
0.76
29848--29959
32
3.5
32
72
11
104
80
1
11
6
0.97
29877--29959
24
3.5
24
75
9
82
81
0
12
6
0.85
30504--30533
12
2.6
12
94
5
53
30
0
33
36
1.58
30542--30738
79
2.5
78
83
4
229
37
6
23
32
1.81
31260--31644
21
17.6
21
74
13
242
37
9
15
37
1.81
31260--31644
42
8.8
42
78
10
285
37
9
15
37
1.81
31447--31533
25
3.7
25
71
13
76
36
13
14
34
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32047--32083
14
2.6
14
91
0
56
37
5
16
40
1.71
32220--32551
41
8.0
40
77
11
251
25
14
17
43
1.86
32222--32548
85
3.9
85
80
7
248
24
14
16
44
1.85
32216--32551
126
2.7
123
82
6
369
25
13
17
42
1.86
34036--34138
52
2.0
52
84
3
136
51
10
9
28
1.68
34051--34149
52
1.9
52
81
4
119
56
8
8
27
1.56
34008--34229
121
1.8
124
86
4
326
53
8
9
28
1.62
36049--36095
24
2.0
24
87
8
69
55
6
0
38
1.26
36903--36941
17
2.3
17
86
0
51
33
20
17
28
1.96
37208--37359
46
3.3
46
75
1
151
46
13
8
32
1.73
37303--37352
24
2.0
25
84
3
66
56
12
6
26
1.58
37303--37352
25
2.0
25
84
7
66
56
12
6
26
1.58
39254--39458
101
2.0
101
85
0
275
45
11
16
26
1.81
45469--45507
16
2.4
16
91
0
60
66
7
5
20
1.36
46612--46811
100
2.0
99
90
4
314
35
11
11
42
1.76
47984--48047
25
2.6
25
82
7
69
20
4
3
71
1.17
47995--48048
25
2.1
27
86
10
78
20
3
3
72
1.16
48033--48114
6
13.7
6
91
5
58
31
13
0
54
1.39
48031--48108
15
5.1
15
77
10
68
30
12
0
56
1.37
48035--48144
12
8.9
12
82
8
87
32
17
0
50
1.46
48033--48147
33
3.5
33
90
0
158
32
16
0
51
1.45
48038--48141
27
3.9
27
89
0
136
32
18
0
49
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48053--48135
6
14.3
6
91
7
118
33
20
0
45
1.51
53054--53115
23
2.6
23
82
5
70
80
1
12
4
0.94
53054--53120
8
8.2
8
73
17
50
80
1
13
4
0.93
54160--54210
22
2.4
22
78
15
54
25
3
21
49
1.67
55659--55696
3
13.0
3
94
5
69
31
0
0
68
0.90
56496--56543
24
2.0
25
84
8
64
20
6
2
70
1.19

Tables:   1

The End!