Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167921.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56231

Tables:   1   

This is table  1  of  1  ( 73 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7155--7188
16
2.1
16
88
0
50
76
5
14
2
1.09
7248--7410
59
2.8
59
90
4
260
38
11
8
41
1.72
7248--7404
56
2.7
58
93
2
255
37
12
8
42
1.72
7480--7512
16
2.0
17
88
5
50
69
3
0
27
1.03
8341--8423
21
3.9
21
81
13
89
62
1
7
28
1.29
8330--8428
42
2.3
44
79
11
116
63
1
6
29
1.25
8359--8433
17
4.4
16
78
10
60
69
0
4
26
1.06
8382--8526
3
45.0
3
69
20
55
60
0
4
33
1.23
8363--8429
23
3.0
23
89
6
102
65
0
4
29
1.12
8375--8526
23
6.6
23
76
14
100
61
0
4
32
1.21
8398--8511
24
4.8
24
78
13
96
60
0
4
34
1.23
8399--8537
52
2.7
51
75
17
151
62
0
4
32
1.20
8372--8538
8
22.9
7
66
19
51
62
0
4
32
1.18
8727--8758
16
2.0
16
100
0
64
37
12
18
31
1.88
23116--23143
14
2.0
14
100
0
56
35
14
14
35
1.86
26278--26318
3
13.7
3
94
0
73
65
0
2
31
1.05
26339--26391
27
2.0
27
85
7
72
35
3
7
52
1.48
26424--26585
21
7.8
20
69
13
78
37
6
8
47
1.60
26576--26626
21
2.4
21
80
6
59
37
1
7
52
1.42
26429--26626
105
1.9
104
83
5
256
38
5
8
47
1.56
26883--26957
22
3.4
22
88
0
105
41
12
2
44
1.55
26923--27097
33
5.4
33
72
14
141
41
10
1
45
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26968--27056
22
4.0
21
75
13
81
43
10
0
46
1.37
27161--27213
22
2.4
21
82
14
63
24
7
5
62
1.44
27204--27319
22
5.4
22
69
17
91
38
13
1
45
1.54
27209--27310
43
2.4
42
81
4
123
41
14
0
43
1.52
27831--28004
22
7.9
22
82
4
163
40
7
6
44
1.59
27831--27982
44
3.5
44
83
0
196
40
8
6
44
1.61
27831--28026
66
3.0
66
80
1
196
40
7
6
45
1.59
27844--28057
22
9.7
22
75
14
91
39
7
7
44
1.62
27831--28049
44
5.0
43
77
10
158
39
7
7
45
1.61
28160--28221
22
2.8
22
73
9
63
30
6
6
56
1.50
28161--28244
44
1.9
44
83
9
109
28
7
5
58
1.48
28235--28319
23
3.5
23
70
16
73
43
11
0
44
1.40
28386--28435
22
2.3
22
82
6
57
40
12
4
44
1.60
28394--28440
22
2.1
22
88
7
69
34
10
6
48
1.63
28394--28453
22
2.7
22
82
10
61
35
10
5
50
1.58
28481--28533
22
2.4
22
87
0
70
37
13
1
47
1.54
28627--28764
22
6.2
22
68
14
77
41
12
2
44
1.54
28683--28765
22
3.7
22
76
9
87
42
16
1
39
1.56
28752--28794
22
2.0
22
81
9
52
34
11
6
46
1.67
28800--28871
21
3.4
21
72
12
67
34
4
11
50
1.57
28778--28875
22
4.7
20
75
12
72
34
4
10
51
1.55
30328--30353
6
4.3
6
100
0
52
53
0
0
46
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31957--32004
24
2.0
24
100
0
96
41
0
12
45
1.42
32127--32158
16
2.0
16
93
0
55
59
3
6
31
1.38
35112--35159
23
2.1
22
88
3
69
60
4
0
35
1.16
35283--35322
21
1.9
21
84
0
53
32
5
10
52
1.56
35509--35555
4
11.8
4
95
0
85
23
0
27
48
1.51
36525--36565
18
2.3
19
83
8
50
26
2
2
68
1.15
37364--37425
21
2.9
22
76
9
74
40
1
3
54
1.26
37536--37588
21
2.5
21
84
0
61
35
3
11
49
1.57
37561--37621
27
2.3
27
91
5
97
36
4
3
55
1.38
37573--37693
27
4.5
27
72
14
99
34
8
4
52
1.53
37601--37706
52
2.0
52
100
0
212
32
10
7
50
1.65
37793--37938
20
6.7
20
71
18
94
39
6
4
49
1.49
37824--37948
21
5.8
20
75
11
79
40
6
4
48
1.50
37789--37938
66
2.3
66
95
1
264
40
6
4
48
1.50
37846--37935
46
2.0
44
86
4
126
40
5
4
50
1.46
38009--38059
21
2.4
21
83
0
66
35
1
5
56
1.35
38031--38081
27
1.9
27
88
4
77
29
1
9
58
1.41
38144--38180
12
3.3
12
78
21
53
35
5
8
51
1.55
38146--38179
10
3.3
10
84
8
50
35
5
8
50
1.58
38058--38180
21
6.0
21
72
15
96
34
6
8
50
1.60
38142--38191
21
2.4
20
80
9
64
38
4
6
52
1.45
40775--40803
2
14.5
2
100
0
58
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41682--41706
8
3.1
8
100
0
50
48
0
0
52
1.00
41712--41747
3
12.0
3
100
0
72
33
0
0
66
0.92
43286--43350
25
2.7
23
83
9
85
41
18
6
33
1.75
44538--44605
35
1.9
35
100
0
136
23
30
0
45
1.53
50844--50870
2
13.5
2
100
0
54
48
0
0
51
1.00
51930--51984
3
18.3
3
77
7
58
60
1
5
32
1.30
51924--51975
27
2.0
26
92
3
86
57
1
5
34
1.33

Tables:   1

The End!