Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167924.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54654

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1189--1231
19
2.3
19
84
8
52
46
2
2
48
1.27
2643--2682
2
20.0
2
89
0
62
50
5
0
45
1.23
6471--6503
2
16.5
2
93
0
57
45
0
3
51
1.16
7498--7540
21
1.9
24
86
13
65
48
6
2
41
1.43
7677--7722
19
2.5
19
86
6
60
43
4
21
30
1.72
11095--11139
16
2.8
16
83
6
56
37
0
0
62
0.96
12891--12936
20
2.4
19
85
3
65
84
2
6
6
0.84
12889--12962
29
2.5
29
82
10
80
77
2
9
10
1.10
14930--14990
25
2.4
25
86
0
86
32
13
9
44
1.76
17781--17820
19
2.1
19
85
0
53
47
10
7
35
1.65
30846--31098
124
2.0
123
80
8
280
37
13
12
35
1.83
30951--31178
127
1.8
125
79
7
264
38
10
11
39
1.77
36921--36976
22
2.4
23
80
14
62
35
7
0
57
1.26
37359--37393
16
2.2
16
90
10
54
31
0
2
65
1.07
38741--38951
103
2.0
103
90
0
332
35
9
18
36
1.82
40512--40536
4
6.2
4
100
0
50
24
0
0
76
0.80
44205--44239
2
17.5
2
93
0
61
48
0
0
51
1.00
45743--45878
72
1.9
72
93
0
236
30
7
20
41
1.80
46498--46530
13
2.7
12
90
9
57
39
0
3
57
1.14
50724--50795
19
3.8
19
68
21
53
68
1
8
22
1.24
50776--50845
13
6.1
12
75
18
51
70
1
4
24
1.14
51088--51115
8
3.5
8
100
0
56
78
0
10
10
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51509--51551
19
2.3
19
84
11
61
32
4
4
58
1.39
52009--52045
19
1.9
20
88
5
58
78
5
5
10
1.08
54573--54613
16
2.6
16
92
0
64
21
17
4
56
1.60

Tables:   1

The End!