Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Chr14
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 244914714
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.31
Warning! 4503000 characters in sequence are not A, C, G, or T
File 513 of 770
Found at i:159101238 original size:80 final size:79
Alignment explanation
Indices: 159101104--159101252 Score: 194
Period size: 80 Copynumber: 1.9 Consensus size: 79
159101094 ATAACCATGT
* *
159101104 GCACAAATGCCTTCGGGTCTTAGCCCGGATAGAATGTCTCGCACGAATGCCTTCGGGTCTTAGCC
1 GCACAAATGCCTTCGGGTCTTAACCCGGATAGAATGTCTCGCACGAATGCCTTCGGG-ATTAGCC
159101169 CGGATGTAGCCACTA
65 CGGATGTAGCCACTA
* * * * *
159101184 GCACAATTGCCTTCGGGTCTTAACCCGGATATAATTTC-CAGCA-TAATTGTCTTCGGGATTAGC
1 GCACAAATGCCTTCGGGTCTTAACCCGGATAGAATGTCTC-GCACGAA-TGCCTTCGGGATTAGC
159101247 CCGGAT
64 CCGGAT
159101253 ATCATTCAAT
Statistics
Matches: 60, Mismatches: 7, Indels: 5
0.83 0.10 0.07
Matches are distributed among these distances:
79 14 0.23
80 46 0.77
ACGTcount: A:0.22, C:0.27, G:0.24, T:0.27
Consensus pattern (79 bp):
GCACAAATGCCTTCGGGTCTTAACCCGGATAGAATGTCTCGCACGAATGCCTTCGGGATTAGCCC
GGATGTAGCCACTA
Found at i:159109105 original size:40 final size:39
Alignment explanation
Indices: 159109060--159109189 Score: 136
Period size: 40 Copynumber: 3.3 Consensus size: 39
159109050 CGGAATATAA
159109060 CCGGATATAACCATGTGCACAAATGCCTTCGGGTCTTAGC
1 CCGGATATAACCAT-TGCACAAATGCCTTCGGGTCTTAGC
* * * *
159109100 CCGGATAGAATGTC-TCGCACGAATGCCTTCGGGTCTTAGC
1 CCGGATATAA--CCATTGCACAAATGCCTTCGGGTCTTAGC
* * * * *
159109140 CCGGATGTAGCCACTAGCACAATTGCCTTCGGGTCTTAAC
1 CCGGATATAACCA-TTGCACAAATGCCTTCGGGTCTTAGC
159109180 CCGGATATAA
1 CCGGATATAA
159109190 TTTCCAGCAT
Statistics
Matches: 72, Mismatches: 14, Indels: 8
0.77 0.15 0.09
Matches are distributed among these distances:
38 1 0.01
40 69 0.96
41 1 0.01
42 1 0.01
ACGTcount: A:0.24, C:0.28, G:0.24, T:0.25
Consensus pattern (39 bp):
CCGGATATAACCATTGCACAAATGCCTTCGGGTCTTAGC
Found at i:159109204 original size:40 final size:40
Alignment explanation
Indices: 159109076--159109227 Score: 148
Period size: 40 Copynumber: 3.8 Consensus size: 40
159109066 ATAACCATGT
* * *
159109076 GCACAAATGCCTTCGGGTCTTAGCCCGGATAGAATGTCTC-
1 GCACAATTGCCTTCGGGTCTTAGCCCGGATATAATCTC-CA
* ** * *
159109116 GCACGAA-TGCCTTCGGGTCTTAGCCCGGATGTAGCCACTA
1 GCAC-AATTGCCTTCGGGTCTTAGCCCGGATATAATCTCCA
* *
159109156 GCACAATTGCCTTCGGGTCTTAACCCGGATATAATTTCCA
1 GCACAATTGCCTTCGGGTCTTAGCCCGGATATAATCTCCA
* *
159109196 GCATAATTGTCTTCGGGAT-TTAGCCCGGATAT
1 GCACAATTGCCTTCGGG-TCTTAGCCCGGATAT
159109228 CATTCAATTT
Statistics
Matches: 91, Mismatches: 17, Indels: 8
0.78 0.15 0.07
Matches are distributed among these distances:
39 2 0.02
40 86 0.95
41 3 0.03
ACGTcount: A:0.22, C:0.26, G:0.24, T:0.28
Consensus pattern (40 bp):
GCACAATTGCCTTCGGGTCTTAGCCCGGATATAATCTCCA
Found at i:159109210 original size:80 final size:80
Alignment explanation
Indices: 159109076--159109225 Score: 198
Period size: 80 Copynumber: 1.9 Consensus size: 80
159109066 ATAACCATGT
*
159109076 GCACAAATGCCTTCGGGTCTTAGCCCGGATAGAATGTCTCGCACGAATGCCTTCGGG-TCTTAGC
1 GCACAAATGCCTTCGGGTCTTAACCCGGATAGAATGTCTCGCACGAATGCCTTCGGGAT-TTAGC
159109140 CCGGATGTAGCCACTA
65 CCGGATGTAGCCACTA
* * * * *
159109156 GCACAATTGCCTTCGGGTCTTAACCCGGATATAATTTC-CAGCA-TAATTGTCTTCGGGATTTAG
1 GCACAAATGCCTTCGGGTCTTAACCCGGATAGAATGTCTC-GCACGAA-TGCCTTCGGGATTTAG
159109219 CCCGGAT
64 CCCGGAT
159109226 ATCATTCAAT
Statistics
Matches: 61, Mismatches: 6, Indels: 6
0.84 0.08 0.08
Matches are distributed among these distances:
79 3 0.05
80 57 0.93
81 1 0.02
ACGTcount: A:0.22, C:0.27, G:0.24, T:0.27
Consensus pattern (80 bp):
GCACAAATGCCTTCGGGTCTTAACCCGGATAGAATGTCTCGCACGAATGCCTTCGGGATTTAGCC
CGGATGTAGCCACTA
Found at i:159110968 original size:47 final size:45
Alignment explanation
Indices: 159110884--159111002 Score: 123
Period size: 47 Copynumber: 2.6 Consensus size: 45
159110874 GTCACAGTGT
* * * * *
159110884 TAATGCCATATCTTGATATGGTCTTACATGGAGTCCTTAATCAATGC
1 TAATGCCATGTCTTGACATGGTCTTACAGGGAGTCCTT--GCAATAC
**
159110931 TAATGCCATGTCTTGACATGGTCTTACACGGGA-TCCTTGCCTTAC
1 TAATGCCATGTCTTGACATGGTCTTACA-GGGAGTCCTTGCAATAC
* *
159110976 CAATTCCATGTCTTGACATGGTCTTAC
1 TAATGCCATGTCTTGACATGGTCTTAC
159111003 CAATTCCATG
Statistics
Matches: 62, Mismatches: 9, Indels: 4
0.83 0.12 0.05
Matches are distributed among these distances:
45 28 0.45
47 31 0.50
48 3 0.05
ACGTcount: A:0.24, C:0.24, G:0.18, T:0.35
Consensus pattern (45 bp):
TAATGCCATGTCTTGACATGGTCTTACAGGGAGTCCTTGCAATAC
Found at i:159111009 original size:27 final size:27
Alignment explanation
Indices: 159110971--159111029 Score: 118
Period size: 27 Copynumber: 2.2 Consensus size: 27
159110961 GGATCCTTGC
159110971 CTTACCAATTCCATGTCTTGACATGGT
1 CTTACCAATTCCATGTCTTGACATGGT
159110998 CTTACCAATTCCATGTCTTGACATGGT
1 CTTACCAATTCCATGTCTTGACATGGT
159111025 CTTAC
1 CTTAC
159111030 ATGGTATCCT
Statistics
Matches: 32, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
27 32 1.00
ACGTcount: A:0.22, C:0.27, G:0.14, T:0.37
Consensus pattern (27 bp):
CTTACCAATTCCATGTCTTGACATGGT
Found at i:159111094 original size:44 final size:44
Alignment explanation
Indices: 159111046--159111129 Score: 116
Period size: 44 Copynumber: 1.9 Consensus size: 44
159111036 TCCTTAACCG
* *
159111046 TCAATTCATCCTTAAATGCCATGTTATGAA-CATGGACTTTTCCA
1 TCAATTCATCCTTAAATGCCATGGTA-CAACCATGGACTTTTCCA
* *
159111090 TCAATTCTTCCTTAATTGCCATGGTACAACCATGGACTTT
1 TCAATTCATCCTTAAATGCCATGGTACAACCATGGACTTT
159111130 GAGATATCAA
Statistics
Matches: 35, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
43 2 0.06
44 33 0.94
ACGTcount: A:0.27, C:0.24, G:0.12, T:0.37
Consensus pattern (44 bp):
TCAATTCATCCTTAAATGCCATGGTACAACCATGGACTTTTCCA
Found at i:159114788 original size:28 final size:27
Alignment explanation
Indices: 159114738--159114846 Score: 123
Period size: 27 Copynumber: 4.0 Consensus size: 27
159114728 AGCATGGATG
** *
159114738 CCAGAACAGATAA-CGTGATAGAGTCA
1 CCAGAACAGATAATCGTGGCAGAGCCA
159114764 CCAGATACAGATAATCGTGGCAGAGCCA
1 CCAGA-ACAGATAATCGTGGCAGAGCCA
*
159114792 CCAGAACAGA-AATATGTGGCAGAGCCA
1 CCAGAACAGATAAT-CGTGGCAGAGCCA
* * *
159114819 CCAGATCAGATAATTGTGGCATAGCCA
1 CCAGAACAGATAATCGTGGCAGAGCCA
159114846 C
1 C
159114847 TAGGACGTTT
Statistics
Matches: 73, Mismatches: 6, Indels: 7
0.85 0.07 0.08
Matches are distributed among these distances:
26 8 0.11
27 47 0.64
28 18 0.25
ACGTcount: A:0.38, C:0.23, G:0.24, T:0.16
Consensus pattern (27 bp):
CCAGAACAGATAATCGTGGCAGAGCCA
Found at i:159119929 original size:40 final size:40
Alignment explanation
Indices: 159119802--159119931 Score: 174
Period size: 40 Copynumber: 3.2 Consensus size: 40
159119792 ATGCTGGAAA
* *
159119802 TTATATCCGGGTTAAGACCCGAAGGCAATT-GTGCTAGTGG
1 TTATATCCGGGCTAAGACCCGAAGGC-ATTCGTGCGAGTGG
* * *
159119842 CTACATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTCG
1 TTATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTGG
*
159119882 TTCTATCCGGGCTAAGACCCGAAGGCATTCGTGC-ACGTGG
1 TTATATCCGGGCTAAGACCCGAAGGCATTCGTGCGA-GTGG
159119922 TTATATCCGG
1 TTATATCCGG
159119932 TTGTATTCCG
Statistics
Matches: 78, Mismatches: 10, Indels: 4
0.85 0.11 0.04
Matches are distributed among these distances:
39 4 0.05
40 74 0.95
ACGTcount: A:0.22, C:0.25, G:0.29, T:0.24
Consensus pattern (40 bp):
TTATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTGG
Found at i:159132974 original size:46 final size:46
Alignment explanation
Indices: 159132907--159133134 Score: 332
Period size: 46 Copynumber: 5.0 Consensus size: 46
159132897 AGTGTGCTCT
159132907 CTGATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
*
159132953 CTGATATAAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
*
159132999 CTGATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAT
1 CTGATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
* ***
159133045 GTGATATGAAATGAACAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
* * * * * *
159133091 ATGACA-GAAAATGAGTAAGACCATAGTTGAAAGACACTATGGCA
1 CTGATATG-AAATGTGTAAGACCATGGTTGAAAGATACCATGGCA
159133135 TCATGTCAAA
Statistics
Matches: 166, Mismatches: 15, Indels: 2
0.91 0.08 0.01
Matches are distributed among these distances:
45 1 0.01
46 165 0.99
ACGTcount: A:0.40, C:0.14, G:0.23, T:0.22
Consensus pattern (46 bp):
CTGATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
Found at i:159138667 original size:11 final size:12
Alignment explanation
Indices: 159138651--159138686 Score: 58
Period size: 11 Copynumber: 3.2 Consensus size: 12
159138641 AGAAAAAAAA
159138651 GAAGAGAG-AGG
1 GAAGAGAGAAGG
159138662 GAAGAGAGAAGG
1 GAAGAGAGAAGG
159138674 G-AGAGAGAAGG
1 GAAGAGAGAAGG
159138685 GA
1 GA
159138687 GGGGGAAGGG
Statistics
Matches: 23, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
11 19 0.83
12 4 0.17
ACGTcount: A:0.47, C:0.00, G:0.53, T:0.00
Consensus pattern (12 bp):
GAAGAGAGAAGG
Found at i:159138687 original size:11 final size:11
Alignment explanation
Indices: 159138653--159138697 Score: 56
Period size: 11 Copynumber: 4.1 Consensus size: 11
159138643 AAAAAAAAGA
159138653 AGAGAG-AGGG
1 AGAGAGAAGGG
159138663 AAGAGAGAAGGG
1 -AGAGAGAAGGG
159138675 AGAGAGAAGGG
1 AGAGAGAAGGG
* *
159138686 AGGGGGAAGGG
1 AGAGAGAAGGG
159138697 A
1 A
159138698 AATCCGGTCG
Statistics
Matches: 31, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
11 27 0.87
12 4 0.13
ACGTcount: A:0.42, C:0.00, G:0.58, T:0.00
Consensus pattern (11 bp):
AGAGAGAAGGG
Found at i:159138994 original size:14 final size:15
Alignment explanation
Indices: 159138959--159138994 Score: 65
Period size: 14 Copynumber: 2.5 Consensus size: 15
159138949 TTTTTGGTTT
159138959 TTTTTTTGCTGGAAA
1 TTTTTTTGCTGGAAA
159138974 TTTTTTT-CTGGAAA
1 TTTTTTTGCTGGAAA
159138988 TTTTTTT
1 TTTTTTT
159138995 TTGGTGCTGG
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
14 14 0.67
15 7 0.33
ACGTcount: A:0.17, C:0.06, G:0.14, T:0.64
Consensus pattern (15 bp):
TTTTTTTGCTGGAAA
Found at i:159139009 original size:33 final size:31
Alignment explanation
Indices: 159138956--159139028 Score: 96
Period size: 33 Copynumber: 2.3 Consensus size: 31
159138946 TTTTTTTTGG
*
159138956 TTTTTTTTT-TGCTGGAAATTTTTTTCTGGAAA
1 TTTTTTTTTGTGCTGGAAATTTTTTGCTGG--A
159138988 TTTTTTTTTGGTGCTGG-AATTTTTTGCTGGA
1 TTTTTTTTT-GTGCTGGAAATTTTTTGCTGGA
159139019 TTTTTTTTTG
1 TTTTTTTTTG
159139029 CTTCCCCTCT
Statistics
Matches: 38, Mismatches: 1, Indels: 6
0.84 0.02 0.13
Matches are distributed among these distances:
30 1 0.03
31 10 0.26
32 9 0.24
33 12 0.32
34 6 0.16
ACGTcount: A:0.12, C:0.05, G:0.19, T:0.63
Consensus pattern (31 bp):
TTTTTTTTTGTGCTGGAAATTTTTTGCTGGA
Found at i:159139024 original size:14 final size:15
Alignment explanation
Indices: 159138958--159139030 Score: 62
Period size: 15 Copynumber: 4.7 Consensus size: 15
159138948 TTTTTTGGTT
159138958 TTTTTTTTGCTGGAA
1 TTTTTTTTGCTGGAA
*
159138973 ATTTTTTT-CTGGAAA
1 TTTTTTTTGCTGG-AA
159138988 TTTTTTTTTGGTGCTGGAA
1 --TTTTTTT--TGCTGGAA
*
159139007 --TTTTTTGCTGGAT
1 TTTTTTTTGCTGGAA
159139020 TTTTTTTTGCT
1 TTTTTTTTGCT
159139031 TCCCCTCTTT
Statistics
Matches: 47, Mismatches: 3, Indels: 16
0.71 0.05 0.24
Matches are distributed among these distances:
13 7 0.15
14 4 0.09
15 23 0.49
17 6 0.13
19 3 0.06
20 4 0.09
ACGTcount: A:0.12, C:0.07, G:0.19, T:0.62
Consensus pattern (15 bp):
TTTTTTTTGCTGGAA
Found at i:159139473 original size:35 final size:35
Alignment explanation
Indices: 159139433--159139538 Score: 194
Period size: 35 Copynumber: 3.0 Consensus size: 35
159139423 GGGGTGTGTG
*
159139433 ATGGTGCTGGCGGCAGACAGCATGGGAGAGTGGGA
1 ATGGTGCTGGTGGCAGACAGCATGGGAGAGTGGGA
*
159139468 GTGGTGCTGGTGGCAGACAGCATGGGAGAGTGGGA
1 ATGGTGCTGGTGGCAGACAGCATGGGAGAGTGGGA
159139503 ATGGTGCTGGTGGCAGACAGCATGGGAGAGTGGGA
1 ATGGTGCTGGTGGCAGACAGCATGGGAGAGTGGGA
159139538 A
1 A
159139539 GAGGCAAGTG
Statistics
Matches: 68, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
35 68 1.00
ACGTcount: A:0.23, C:0.12, G:0.49, T:0.16
Consensus pattern (35 bp):
ATGGTGCTGGTGGCAGACAGCATGGGAGAGTGGGA
Found at i:159142401 original size:33 final size:33
Alignment explanation
Indices: 159142356--159142467 Score: 163
Period size: 33 Copynumber: 3.4 Consensus size: 33
159142346 CTTTTATGGT
159142356 AGAA-GAAGACTCTAGTAGAGAGGATTCAGTGAA
1 AGAAGGAA-ACTCTAGTAGAGAGGATTCAGTGAA
159142389 AGAAGGAAACTCTAGTAGAGAGGATTCAGTGAA
1 AGAAGGAAACTCTAGTAGAGAGGATTCAGTGAA
* * *
159142422 AGAAGGAGACTCTAGTAGGGAGGATCCAGTGAA
1 AGAAGGAAACTCTAGTAGAGAGGATTCAGTGAA
* *
159142455 AGAAAGAGACTCT
1 AGAAGGAAACTCT
159142468 GATGAAGAAG
Statistics
Matches: 74, Mismatches: 4, Indels: 2
0.93 0.05 0.03
Matches are distributed among these distances:
33 71 0.96
34 3 0.04
ACGTcount: A:0.41, C:0.11, G:0.31, T:0.17
Consensus pattern (33 bp):
AGAAGGAAACTCTAGTAGAGAGGATTCAGTGAA
Found at i:159146185 original size:51 final size:51
Alignment explanation
Indices: 159146090--159146188 Score: 119
Period size: 51 Copynumber: 1.9 Consensus size: 51
159146080 ACAAATTTAG
* *
159146090 CCCTCAAATTTTACATATTATATAAATTTAGACATAATTTTAAAAAATTAA
1 CCCTCAAATTTTACAAATTATATAAATTTAGACATAATTCTAAAAAATTAA
* * * * *
159146141 CCCTCAAATTTTATAAATTATTTTAATTT-GATAGTGATTCTAAAAAAT
1 CCCTCAAATTTTACAAATTATATAAATTTAGACA-TAATTCTAAAAAAT
159146189 CAATAAAAAT
Statistics
Matches: 40, Mismatches: 7, Indels: 2
0.82 0.14 0.04
Matches are distributed among these distances:
50 3 0.08
51 37 0.93
ACGTcount: A:0.43, C:0.11, G:0.04, T:0.41
Consensus pattern (51 bp):
CCCTCAAATTTTACAAATTATATAAATTTAGACATAATTCTAAAAAATTAA
Found at i:159148938 original size:11 final size:11
Alignment explanation
Indices: 159148927--159148965 Score: 51
Period size: 11 Copynumber: 3.5 Consensus size: 11
159148917 TTTTTAATAT
*
159148927 TATTTTCTTAT
1 TATTTTCTTAC
*
159148938 TATTTTCTTCC
1 TATTTTCTTAC
*
159148949 TATTTTGTTAC
1 TATTTTCTTAC
159148960 TATTTT
1 TATTTT
159148966 ACTATTATGT
Statistics
Matches: 24, Mismatches: 4, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
11 24 1.00
ACGTcount: A:0.15, C:0.13, G:0.03, T:0.69
Consensus pattern (11 bp):
TATTTTCTTAC
Found at i:159148972 original size:33 final size:33
Alignment explanation
Indices: 159148927--159148990 Score: 78
Period size: 33 Copynumber: 1.9 Consensus size: 33
159148917 TTTTTAATAT
* *
159148927 TATTTTCTTATTAT-TTTCTTCCTATTTTGTTAC
1 TATTTTCTTATTATGTTGC-TACTATTTTGTTAC
159148960 TATTTTAC-TATTATGTTGCTACTATTTTGTT
1 TATTTT-CTTATTATGTTGCTACTATTTTGTT
159148991 GTTATTGTTT
Statistics
Matches: 27, Mismatches: 2, Indels: 4
0.82 0.06 0.12
Matches are distributed among these distances:
33 23 0.85
34 4 0.15
ACGTcount: A:0.17, C:0.12, G:0.06, T:0.64
Consensus pattern (33 bp):
TATTTTCTTATTATGTTGCTACTATTTTGTTAC
Found at i:159149074 original size:30 final size:30
Alignment explanation
Indices: 159149033--159149090 Score: 89
Period size: 30 Copynumber: 1.9 Consensus size: 30
159149023 TATTGTTAAT
*
159149033 TTTTTTTATTATTTTAAAGACATTTGCTAA
1 TTTTGTTATTATTTTAAAGACATTTGCTAA
* *
159149063 TTTTGTTATTATTTTAGAGGCATTTGCT
1 TTTTGTTATTATTTTAAAGACATTTGCT
159149091 TGTTAAATTG
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
30 25 1.00
ACGTcount: A:0.24, C:0.07, G:0.12, T:0.57
Consensus pattern (30 bp):
TTTTGTTATTATTTTAAAGACATTTGCTAA
Found at i:159149241 original size:12 final size:12
Alignment explanation
Indices: 159149206--159149243 Score: 53
Period size: 11 Copynumber: 3.3 Consensus size: 12
159149196 GTTTATATAT
*
159149206 ATATTAAAATT-
1 ATATAAAAATTA
159149217 ATATAAAAA-TA
1 ATATAAAAATTA
159149228 ATATAAAAATTA
1 ATATAAAAATTA
159149240 ATAT
1 ATAT
159149244 GGGCGGGCCG
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
10 1 0.04
11 17 0.71
12 6 0.25
ACGTcount: A:0.63, C:0.00, G:0.00, T:0.37
Consensus pattern (12 bp):
ATATAAAAATTA
Found at i:159149495 original size:13 final size:13
Alignment explanation
Indices: 159149477--159149502 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
159149467 TTTGAAAATA
159149477 ATAGTATTAATGT
1 ATAGTATTAATGT
159149490 ATAGTATTAATGT
1 ATAGTATTAATGT
159149503 TATCATACAT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.00, G:0.15, T:0.46
Consensus pattern (13 bp):
ATAGTATTAATGT
Found at i:159151890 original size:26 final size:25
Alignment explanation
Indices: 159151844--159151892 Score: 64
Period size: 26 Copynumber: 1.9 Consensus size: 25
159151834 AATGTATTGT
159151844 ATTTATTATTATTATAGATCTTATC
1 ATTTATTATTATTATAGATCTTATC
*
159151869 ATTTA-TATATATATATATATCTTA
1 ATTTATTAT-TAT-TATAGATCTTA
159151893 ATATATATAT
Statistics
Matches: 21, Mismatches: 1, Indels: 3
0.84 0.04 0.12
Matches are distributed among these distances:
24 3 0.14
25 8 0.38
26 10 0.48
ACGTcount: A:0.37, C:0.06, G:0.02, T:0.55
Consensus pattern (25 bp):
ATTTATTATTATTATAGATCTTATC
Found at i:159152180 original size:21 final size:23
Alignment explanation
Indices: 159152156--159152203 Score: 55
Period size: 21 Copynumber: 2.2 Consensus size: 23
159152146 TATTTTTATG
159152156 TATACCTCTAATA-TTATA-TTA
1 TATACCTCTAATACTTATATTTA
** *
159152177 TATATTTCTAATACTTGTATTTA
1 TATACCTCTAATACTTATATTTA
159152200 TATA
1 TATA
159152204 TATATGCATG
Statistics
Matches: 22, Mismatches: 3, Indels: 2
0.81 0.11 0.07
Matches are distributed among these distances:
21 11 0.50
22 4 0.18
23 7 0.32
ACGTcount: A:0.35, C:0.10, G:0.02, T:0.52
Consensus pattern (23 bp):
TATACCTCTAATACTTATATTTA
Found at i:159152204 original size:23 final size:21
Alignment explanation
Indices: 159152162--159152204 Score: 59
Period size: 23 Copynumber: 2.0 Consensus size: 21
159152152 TATGTATACC
159152162 TCTAATATTATATTATATATT
1 TCTAATATTATATTATATATT
*
159152183 TCTAATACTTGTATTTATATAT
1 TCTAATA-TTATA-TTATATAT
159152205 ATATGCATGT
Statistics
Matches: 19, Mismatches: 1, Indels: 2
0.86 0.05 0.09
Matches are distributed among these distances:
21 7 0.37
22 4 0.21
23 8 0.42
ACGTcount: A:0.35, C:0.07, G:0.02, T:0.56
Consensus pattern (21 bp):
TCTAATATTATATTATATATT
Found at i:159154153 original size:12 final size:10
Alignment explanation
Indices: 159154127--159154151 Score: 50
Period size: 10 Copynumber: 2.5 Consensus size: 10
159154117 AACCAAATAT
159154127 TTATAAAAAA
1 TTATAAAAAA
159154137 TTATAAAAAA
1 TTATAAAAAA
159154147 TTATA
1 TTATA
159154152 TATATTTTTA
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
10 15 1.00
ACGTcount: A:0.64, C:0.00, G:0.00, T:0.36
Consensus pattern (10 bp):
TTATAAAAAA
Found at i:159154352 original size:16 final size:16
Alignment explanation
Indices: 159154333--159154363 Score: 53
Period size: 16 Copynumber: 1.9 Consensus size: 16
159154323 TTGAAAGAGT
159154333 TTTCAAATATATATGG
1 TTTCAAATATATATGG
*
159154349 TTTCAAATTTATATG
1 TTTCAAATATATATG
159154364 CTCTAAAATA
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
16 14 1.00
ACGTcount: A:0.35, C:0.06, G:0.10, T:0.48
Consensus pattern (16 bp):
TTTCAAATATATATGG
Found at i:159155417 original size:46 final size:46
Alignment explanation
Indices: 159155350--159155442 Score: 186
Period size: 46 Copynumber: 2.0 Consensus size: 46
159155340 ACCGACGATA
159155350 AATATAGCAATAATATTTACCTTCACTCCACTCCATAACTATCCCT
1 AATATAGCAATAATATTTACCTTCACTCCACTCCATAACTATCCCT
159155396 AATATAGCAATAATATTTACCTTCACTCCACTCCATAACTATCCCT
1 AATATAGCAATAATATTTACCTTCACTCCACTCCATAACTATCCCT
159155442 A
1 A
159155443 GATCCAACAA
Statistics
Matches: 47, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
46 47 1.00
ACGTcount: A:0.35, C:0.30, G:0.02, T:0.32
Consensus pattern (46 bp):
AATATAGCAATAATATTTACCTTCACTCCACTCCATAACTATCCCT
Found at i:159156246 original size:22 final size:22
Alignment explanation
Indices: 159156218--159156262 Score: 72
Period size: 22 Copynumber: 2.0 Consensus size: 22
159156208 CATTGATAAC
*
159156218 AATATTCATGTTAATTAAACTA
1 AATATTCATGTCAATTAAACTA
*
159156240 AATATTCATGTCAATTGAACTA
1 AATATTCATGTCAATTAAACTA
159156262 A
1 A
159156263 GACTCAACTG
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 21 1.00
ACGTcount: A:0.44, C:0.11, G:0.07, T:0.38
Consensus pattern (22 bp):
AATATTCATGTCAATTAAACTA
Found at i:159162298 original size:20 final size:20
Alignment explanation
Indices: 159162262--159162303 Score: 50
Period size: 20 Copynumber: 2.1 Consensus size: 20
159162252 AAGAAAAAAA
* *
159162262 AAAAGGAAGAGGAGGGAGAG
1 AAAAGAAAGAGGAGGGAAAG
159162282 AAAAGAAAGAGCG-GGGAAAG
1 AAAAGAAAGAG-GAGGGAAAG
159162302 AA
1 AA
159162304 GAGAGGGGAG
Statistics
Matches: 19, Mismatches: 2, Indels: 2
0.83 0.09 0.09
Matches are distributed among these distances:
20 18 0.95
21 1 0.05
ACGTcount: A:0.55, C:0.02, G:0.43, T:0.00
Consensus pattern (20 bp):
AAAAGAAAGAGGAGGGAAAG
Found at i:159163442 original size:21 final size:21
Alignment explanation
Indices: 159163418--159163458 Score: 82
Period size: 21 Copynumber: 2.0 Consensus size: 21
159163408 TCAACTCATT
159163418 TCTCGCAATATGAATTGACTC
1 TCTCGCAATATGAATTGACTC
159163439 TCTCGCAATATGAATTGACT
1 TCTCGCAATATGAATTGACT
159163459 TTTGAAGATA
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.29, C:0.22, G:0.15, T:0.34
Consensus pattern (21 bp):
TCTCGCAATATGAATTGACTC
Found at i:159163564 original size:74 final size:70
Alignment explanation
Indices: 159163439--159163675 Score: 203
Period size: 74 Copynumber: 3.3 Consensus size: 70
159163429 GAATTGACTC
* * * * *
159163439 TCTCGCAATATGAATTGACTT-TTG-AAGATAGAATTTGAAAATACCTTAGCGTGCTGCAAGGCT
1 TCTCGCAATATGAGTTGA-TTATAGAAACATA-AA-TTGAAATTACCTCAGCGTGCTGC-AGGCT
159163502 CAACTCACT
62 CAACTCACT
* ** *
159163511 TCTCGCAATATGAGTTGATTATAGATTTA-ATAGGAATTGAAATTACCTCAGCGTGCCCCGAGGT
1 TCTCGCAATATGAGTTGATTATAGA--AACATA--AATTGAAATTACCTCAGCGTGCTGC-AGGC
159163575 TCAACTCACT
61 TCAACTCACT
* * * *
159163585 TCTCGCAATATGAGTTGATTTTTGAAACATAAATTGAAATTACCTCAACATGTCTTG-AGGCTCA
1 TCTCGCAATATGAGTTGATTATAGAAACATAAATTGAAATTACCTCAGCGTG-C-TGCAGGCTCA
*
159163649 ACTCACC
64 ACTCACT
* *
159163656 TCTCGCAATGTGAGCTGATT
1 TCTCGCAATATGAGTTGATT
159163676 TTCTTGGAAA
Statistics
Matches: 137, Mismatches: 20, Indels: 17
0.79 0.11 0.10
Matches are distributed among these distances:
71 51 0.37
72 21 0.15
73 3 0.02
74 58 0.42
75 4 0.03
ACGTcount: A:0.30, C:0.20, G:0.18, T:0.32
Consensus pattern (70 bp):
TCTCGCAATATGAGTTGATTATAGAAACATAAATTGAAATTACCTCAGCGTGCTGCAGGCTCAAC
TCACT
Found at i:159163660 original size:71 final size:71
Alignment explanation
Indices: 159163497--159163837 Score: 263
Period size: 71 Copynumber: 4.5 Consensus size: 71
159163487 GCGTGCTGCA
* * * *
159163497 AGGCTCAACTCACTTCTCGCAATATGAGTTGATTATAGATTTA-ATAGGAATTGAAATTACCTCA
1 AGGCTCAACTCACCTCTCGCAATATGAGTTGATTTTTGA--AACATA--AATTGAAATTACCTCA
* * **
159163561 GCGTGCCCCG
62 ACATGCCTTG
* *
159163571 AGGTTCAACTCACTTCTCGCAATATGAGTTGATTTTTGAAACATAAATTGAAATTACCTCAACAT
1 AGGCTCAACTCACCTCTCGCAATATGAGTTGATTTTTGAAACATAAATTGAAATTACCTCAACAT
*
159163636 GTCTTG
66 GCCTTG
* * *
159163642 AGGCTCAACTCACCTCTCGCAATGTGAGCTGATTTTCTTGGAAAACATGAATTAAAAAGCAGAAA
1 AGGCTCAACTCACCTCTCGCAATATGAGTTGA-TTT-TT-G-AAACATAAATT--------GAAA
** * *
159163707 TTGAAAAT-ACCTTAGCGTGCCCTG
54 TT--ACCTCAAC--A---TGCCTTG
* *
159163731 AGGCTCAACTCACTTCTCGCAATATGAGTTGATTTTTGAAACATAAATTGAAATTACCTCAACGT
1 AGGCTCAACTCACCTCTCGCAATATGAGTTGATTTTTGAAACATAAATTGAAATTACCTCAACAT
*
159163796 GTCTTG
66 GCCTTG
*
159163802 AGGCTCAACTCACCTCTCGCAATATGAGCTGATTTT
1 AGGCTCAACTCACCTCTCGCAATATGAGTTGATTTT
159163838 CTTGGAAAAC
Statistics
Matches: 215, Mismatches: 31, Indels: 45
0.74 0.11 0.15
Matches are distributed among these distances:
71 88 0.41
72 4 0.02
73 5 0.02
74 37 0.17
75 12 0.06
76 2 0.01
77 6 0.03
83 6 0.03
84 2 0.01
85 12 0.06
86 2 0.01
87 2 0.01
88 3 0.01
89 34 0.16
ACGTcount: A:0.31, C:0.21, G:0.17, T:0.31
Consensus pattern (71 bp):
AGGCTCAACTCACCTCTCGCAATATGAGTTGATTTTTGAAACATAAATTGAAATTACCTCAACAT
GCCTTG
Found at i:159163741 original size:160 final size:160
Alignment explanation
Indices: 159163545--159163889 Score: 636
Period size: 160 Copynumber: 2.2 Consensus size: 160
159163535 ATTTAATAGG
* * *
159163545 AATTGAAATTACCTCAGCGTGCCCCGAGGTTCAACTCACTTCTCGCAATATGAGTTGATTTTTGA
1 AATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTTTTGA
*
159163610 AACATAAATTGAAATTACCTCAACATGTCTTGAGGCTCAACTCACCTCTCGCAATGTGAGCTGAT
66 AACATAAATTGAAATTACCTCAACATGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCTGAT
159163675 TTTCTTGGAAAACATGAATTAAAAAGCAGA
131 TTTCTTGGAAAACATGAATTAAAAAGCAGA
*
159163705 AATTGAAAATACCTTAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTTTTGA
1 AATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTTTTGA
*
159163770 AACATAAATTGAAATTACCTCAACGTGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCTGAT
66 AACATAAATTGAAATTACCTCAACATGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCTGAT
159163835 TTTCTTGGAAAACATGAATTAAAAAGCAGA
131 TTTCTTGGAAAACATGAATTAAAAAGCAGA
159163865 AATTGAAAATACCTCAGCGTGCCCT
1 AATTGAAAATACCTCAGCGTGCCCT
159163890 AAGGACAGAA
Statistics
Matches: 178, Mismatches: 7, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
160 178 1.00
ACGTcount: A:0.33, C:0.21, G:0.17, T:0.29
Consensus pattern (160 bp):
AATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTTTTGA
AACATAAATTGAAATTACCTCAACATGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCTGAT
TTTCTTGGAAAACATGAATTAAAAAGCAGA
Found at i:159175316 original size:40 final size:39
Alignment explanation
Indices: 159175151--159175334 Score: 138
Period size: 40 Copynumber: 4.6 Consensus size: 39
159175141 AAATTGAATG
* * *
159175151 ATATCCGGGCTAAGCCCCGAAGACAATTATGCTGGAAAT--T
1 ATATCCGGGCTAAGACCCGAAGGC-ATT-TG-TGCAAATCGT
* * * * * *
159175191 ATAACCGGGTTAAGACCCGAAGGCAATTGTGCTAGTGGCT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCAAATCG-T
* * * * *
159175231 ACATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTCATT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCAAATC-GT
*
159175271 CTATCCGGGCTAAGACCCGAAGGCATTTGTGCAAATCGT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCAAATCGT
* * *
159175310 GATATCCGGGTTAAGTCCCGTAGGC
1 -ATATCCGGGCTAAGACCCGAAGGC
159175335 CTTGGTGCGG
Statistics
Matches: 113, Mismatches: 26, Indels: 10
0.76 0.17 0.07
Matches are distributed among these distances:
37 4 0.04
38 2 0.02
39 3 0.03
40 104 0.92
ACGTcount: A:0.27, C:0.24, G:0.27, T:0.22
Consensus pattern (39 bp):
ATATCCGGGCTAAGACCCGAAGGCATTTGTGCAAATCGT
Found at i:159175359 original size:80 final size:81
Alignment explanation
Indices: 159175191--159175379 Score: 186
Period size: 80 Copynumber: 2.4 Consensus size: 81
159175181 GCTGGAAATT
* * * *
159175191 ATAACCGGGTTAAGACCCGAAGGCAATTGTGCTAGTGGCTACATCCGGGCTAAGACCCGAAGGCA
1 ATAACCGGGCTAAGACCCGAAGGCAATTGTGCAAATCGCTACATCCGGGCTAAGACCCGAAGGCA
*
159175256 TTCGTGCGAGTCATTC
66 TTCGTGCGAGTCATCC
* * * * * *
159175272 -TATCCGGGCTAAGACCCGAAGGCATTTGTGCAAATCG-TGATATCCGGGTTAAGTCCCGTAGGC
1 ATAACCGGGCTAAGACCCGAAGGCAATTGTGCAAATCGCT-ACATCCGGGCTAAGACCCGAAGGC
* * * *
159175335 CTTGGTGCGGGTTA-CC
65 ATTCGTGCGAGTCATCC
* * *
159175351 ATAACCGGGCTATGTCCCGAAGGCGATTG
1 ATAACCGGGCTAAGACCCGAAGGCAATTG
159175380 ATCGAGTAGC
Statistics
Matches: 86, Mismatches: 20, Indels: 5
0.77 0.18 0.05
Matches are distributed among these distances:
79 2 0.02
80 84 0.98
ACGTcount: A:0.23, C:0.24, G:0.30, T:0.23
Consensus pattern (81 bp):
ATAACCGGGCTAAGACCCGAAGGCAATTGTGCAAATCGCTACATCCGGGCTAAGACCCGAAGGCA
TTCGTGCGAGTCATCC
Found at i:159186269 original size:51 final size:51
Alignment explanation
Indices: 159186212--159186453 Score: 433
Period size: 51 Copynumber: 4.9 Consensus size: 51
159186202 GTATGAGATA
159186212 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATG
1 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATG
159186263 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATG
1 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATG
159186314 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAA--G--TG
1 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATG
159186361 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTA--
1 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATG
*
159186410 TATATATGTGGTAAGGCCTAATGGCCGATGTGATGAATGTGAAA
1 TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAA
159186454 TATATGTGTG
Statistics
Matches: 186, Mismatches: 1, Indels: 10
0.94 0.01 0.05
Matches are distributed among these distances:
47 46 0.25
49 45 0.24
51 95 0.51
ACGTcount: A:0.32, C:0.08, G:0.29, T:0.31
Consensus pattern (51 bp):
TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATG
Found at i:159186408 original size:98 final size:98
Alignment explanation
Indices: 159186210--159186453 Score: 429
Period size: 98 Copynumber: 2.5 Consensus size: 98
159186200 ATGTATGAGA
159186210 TATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATGTATATATGTGAT
1 TATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAG-G-ATGTATATATGTGAT
159186275 AAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
64 AAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
159186310 TATGTATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAA-G-TGTATATATGTGAT
1 TA--TATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGGATGTATATATGTGAT
159186373 AAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
64 AAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
*
159186408 TATATATATGTGGTAAGGCCTAATGGCCGATGTGATGAATGTGAAA
1 TATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAA
159186454 TATATGTGTG
Statistics
Matches: 141, Mismatches: 1, Indels: 8
0.94 0.01 0.05
Matches are distributed among these distances:
96 43 0.30
98 51 0.36
100 3 0.02
102 44 0.31
ACGTcount: A:0.32, C:0.08, G:0.29, T:0.31
Consensus pattern (98 bp):
TATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGGATGTATATATGTGATAA
GGCCTAATGGCCGATGTGATGAATGTGAAAGTG
Found at i:159186502 original size:48 final size:48
Alignment explanation
Indices: 159186445--159186548 Score: 154
Period size: 48 Copynumber: 2.2 Consensus size: 48
159186435 CGATGTGATG
* ** *
159186445 AATGTGAAATATATGTGTGATGTGTATATGTGGTAAAGCCGAAGGGCT
1 AATGTGAAATATATATAAGATATGTATATGTGGTAAAGCCGAAGGGCT
* *
159186493 AATGTGAAATATATATAAGATATGTGTATGTGGTAAAGCCGAATGGCT
1 AATGTGAAATATATATAAGATATGTATATGTGGTAAAGCCGAAGGGCT
159186541 AATGTGAA
1 AATGTGAA
159186549 TGTTGTAATA
Statistics
Matches: 50, Mismatches: 6, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
48 50 1.00
ACGTcount: A:0.36, C:0.06, G:0.28, T:0.31
Consensus pattern (48 bp):
AATGTGAAATATATATAAGATATGTATATGTGGTAAAGCCGAAGGGCT
Found at i:159186644 original size:37 final size:37
Alignment explanation
Indices: 159186588--159186826 Score: 406
Period size: 37 Copynumber: 6.4 Consensus size: 37
159186578 AACTTGGAAA
*
159186588 TATGTTCCGGGTGAGACCCGATGACTACGTGTGGAGAT
1 TATG-TCCGGGTAAGACCCGATGACTACGTGTGGAGAT
* *
159186626 TATGTTCGGATAAGACCCGATGACTACGTGTGGAGAT
1 TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
*
159186663 TATGTCTGGGTAAGACCCGATGACTACGTGTGGAGAT
1 TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
*
159186700 TATGTCCGGGTAAGACCCGATGACTACGTTTGGAGAT
1 TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
159186737 TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
1 TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
159186774 TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
1 TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
* *
159186811 TATGTTCAGGTAAGAC
1 TATGTCCGGGTAAGAC
159186827 TTCGTAATAA
Statistics
Matches: 190, Mismatches: 11, Indels: 1
0.94 0.05 0.00
Matches are distributed among these distances:
37 186 0.98
38 4 0.02
ACGTcount: A:0.25, C:0.18, G:0.31, T:0.26
Consensus pattern (37 bp):
TATGTCCGGGTAAGACCCGATGACTACGTGTGGAGAT
Found at i:159195489 original size:35 final size:35
Alignment explanation
Indices: 159195411--159195492 Score: 92
Period size: 35 Copynumber: 2.3 Consensus size: 35
159195401 GAGATTCGTT
* * * * *
159195411 ATATCATCACATTTGGCCGAATATACAAGTTCTAT
1 ATATCATCACATGTAGCCAAATATACAAGTTCAAC
* * *
159195446 AAAACATCACATGTAGCCAAATTTACAAGTTCAAC
1 ATATCATCACATGTAGCCAAATATACAAGTTCAAC
159195481 ATATCATCACAT
1 ATATCATCACAT
159195493 ATGTACATAC
Statistics
Matches: 37, Mismatches: 10, Indels: 0
0.79 0.21 0.00
Matches are distributed among these distances:
35 37 1.00
ACGTcount: A:0.40, C:0.22, G:0.09, T:0.29
Consensus pattern (35 bp):
ATATCATCACATGTAGCCAAATATACAAGTTCAAC
Found at i:159213677 original size:16 final size:17
Alignment explanation
Indices: 159213656--159213689 Score: 52
Period size: 17 Copynumber: 2.1 Consensus size: 17
159213646 GAATATTATG
159213656 AAATAAA-ACCAAACAA
1 AAATAAACACCAAACAA
*
159213672 AAATAAACATCAAACAA
1 AAATAAACACCAAACAA
159213689 A
1 A
159213690 TGCCATCCTC
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
16 7 0.44
17 9 0.56
ACGTcount: A:0.74, C:0.18, G:0.00, T:0.09
Consensus pattern (17 bp):
AAATAAACACCAAACAA
Found at i:159215711 original size:39 final size:39
Alignment explanation
Indices: 159215657--159215819 Score: 254
Period size: 39 Copynumber: 4.2 Consensus size: 39
159215647 TGTGAATGAA
159215657 TGTGCGAATTGTGATATCCGGGCTAAGCCCGAAGGCAAT
1 TGTGCGAATTGTGATATCCGGGCTAAGCCCGAAGGCAAT
159215696 TGTGCGAATTGTGATATCCGGGCTAAGCCCGAAGGCAAT
1 TGTGCGAATTGTGATATCCGGGCTAAGCCCGAAGGCAAT
** *
159215735 TGTGCGAGCTATGATATCCGGGCTAAGCCCGAAGGCAAT
1 TGTGCGAATTGTGATATCCGGGCTAAGCCCGAAGGCAAT
* * **
159215774 TGTGCGAGTTGTGATATCCGGGTTAAGTCCCGAAGGCGTT
1 TGTGCGAATTGTGATATCCGGGCTAAG-CCCGAAGGCAAT
159215814 TGTGCG
1 TGTGCG
159215820 GGTTACCATA
Statistics
Matches: 115, Mismatches: 8, Indels: 1
0.93 0.06 0.01
Matches are distributed among these distances:
39 99 0.86
40 16 0.14
ACGTcount: A:0.23, C:0.20, G:0.33, T:0.25
Consensus pattern (39 bp):
TGTGCGAATTGTGATATCCGGGCTAAGCCCGAAGGCAAT
Found at i:159221347 original size:71 final size:71
Alignment explanation
Indices: 159221261--159221424 Score: 328
Period size: 71 Copynumber: 2.3 Consensus size: 71
159221251 CGATTTGTCT
159221261 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
159221326 CTTTCA
66 CTTTCA
159221332 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
159221397 CTTTCA
66 CTTTCA
159221403 CGTAGCTCTCTTGTCTACATGG
1 CGTAGCTCTCTTGTCTACATGG
159221425 GATACATCTC
Statistics
Matches: 93, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
71 93 1.00
ACGTcount: A:0.19, C:0.28, G:0.18, T:0.35
Consensus pattern (71 bp):
CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
CTTTCA
Found at i:159221462 original size:71 final size:70
Alignment explanation
Indices: 159221261--159221458 Score: 258
Period size: 71 Copynumber: 2.8 Consensus size: 70
159221251 CGATTTGTCT
* * * *
159221261 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTACAT-ACTTCGAATCACACATGCGACCTAGCTACATTTAT
159221326 CTTTCA
65 CTTTCA
* * * *
159221332 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTACAT-ACTTCGAATCACACATGCGACCTAGCTACATTTAT
159221397 CTTTCA
65 CTTTCA
* *
159221403 CGTAGCTCTCTTGTCTACATGG-GATACAT-C-TCGTATCACACATGTGACCTAGCTAC
1 CGTAGCTCTCTTGTCTACATGGTG-TACATACTTCGAATCACACATGCGACCTAGCTAC
159221459 TACAGGGTGT
Statistics
Matches: 120, Mismatches: 6, Indels: 5
0.92 0.05 0.04
Matches are distributed among these distances:
68 22 0.18
69 1 0.01
70 1 0.01
71 96 0.80
ACGTcount: A:0.21, C:0.28, G:0.17, T:0.34
Consensus pattern (70 bp):
CGTAGCTCTCTTGTCTACATGGTGTACATACTTCGAATCACACATGCGACCTAGCTACATTTATC
TTTCA
Found at i:159228913 original size:71 final size:71
Alignment explanation
Indices: 159228829--159228992 Score: 328
Period size: 71 Copynumber: 2.3 Consensus size: 71
159228819 CGATTTGTCT
159228829 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
159228894 CTTTCA
66 CTTTCA
159228900 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
159228965 CTTTCA
66 CTTTCA
159228971 CGTAGCTCTCTTGTCTACATGG
1 CGTAGCTCTCTTGTCTACATGG
159228993 GATACATCTC
Statistics
Matches: 93, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
71 93 1.00
ACGTcount: A:0.19, C:0.28, G:0.18, T:0.35
Consensus pattern (71 bp):
CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
CTTTCA
Found at i:159229030 original size:71 final size:70
Alignment explanation
Indices: 159228829--159229026 Score: 258
Period size: 71 Copynumber: 2.8 Consensus size: 70
159228819 CGATTTGTCT
* * * *
159228829 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTACAT-ACTTCGAATCACACATGCGACCTAGCTACATTTAT
159228894 CTTTCA
65 CTTTCA
* * * *
159228900 CGTAGCTCTCTTGTCTACATGGTGTCCTTCACTTGGAATCACGCATGCGACCTAGCTACATTTAT
1 CGTAGCTCTCTTGTCTACATGGTGTACAT-ACTTCGAATCACACATGCGACCTAGCTACATTTAT
159228965 CTTTCA
65 CTTTCA
* *
159228971 CGTAGCTCTCTTGTCTACATGG-GATACAT-C-TCGTATCACACATGTGACCTAGCTAC
1 CGTAGCTCTCTTGTCTACATGGTG-TACATACTTCGAATCACACATGCGACCTAGCTAC
159229027 TACAGGGTGT
Statistics
Matches: 120, Mismatches: 6, Indels: 5
0.92 0.05 0.04
Matches are distributed among these distances:
68 22 0.18
69 1 0.01
70 1 0.01
71 96 0.80
ACGTcount: A:0.21, C:0.28, G:0.17, T:0.34
Consensus pattern (70 bp):
CGTAGCTCTCTTGTCTACATGGTGTACATACTTCGAATCACACATGCGACCTAGCTACATTTATC
TTTCA
Found at i:159232275 original size:79 final size:81
Alignment explanation
Indices: 159232128--159232345 Score: 225
Period size: 79 Copynumber: 2.7 Consensus size: 81
159232118 GAATCACGTA
*** * ** *
159232128 CCTTCGGAAT-TTAA-CCGGATATAACGACTCGCTCAAATGCCTTCGGGACAAAGCCCAG-TTAT
1 CCTTCGG-ATCTTAACCCGGATATAGTAACTCGCACAAATGCCTTCGGGACTTAGCCCGGATTAT
*
159232190 AGTAACTCGCACGAATG
65 AGTAACTCGCACGAACG
* *
159232207 CCTTCGGGA-CTTAACCCGGGTTTAGTAACTCGCACAAATGCCTTCGGG-CTTAGCCCGGATT-T
1 CCTTC-GGATCTTAACCCGGATATAGTAACTCGCACAAATGCCTTCGGGACTTAGCCCGGATTAT
*
159232269 ATTAACTCGCACGAACG
65 AGTAACTCGCACGAACG
** * *
159232286 CCTTCGGATCTTAGTCCGGATATAGTCACTTAGCACAAA-GCCTTCGGGACTTAGCCCGGA
1 CCTTCGGATCTTAACCCGGATATAGTAAC-TCGCACAAATGCCTTCGGGACTTAGCCCGGA
159232346 CATCATTCAA
Statistics
Matches: 115, Mismatches: 17, Indels: 13
0.79 0.12 0.09
Matches are distributed among these distances:
78 3 0.03
79 62 0.54
80 50 0.43
ACGTcount: A:0.26, C:0.28, G:0.22, T:0.24
Consensus pattern (81 bp):
CCTTCGGATCTTAACCCGGATATAGTAACTCGCACAAATGCCTTCGGGACTTAGCCCGGATTATA
GTAACTCGCACGAACG
Found at i:159232345 original size:40 final size:39
Alignment explanation
Indices: 159232154--159232345 Score: 181
Period size: 40 Copynumber: 4.8 Consensus size: 39
159232144 GGATATAACG
* ** * *
159232154 ACTCGCTCAAATGCCTTCGGGACAAAGCCCAGTTATAGTA
1 ACTCGCACAAA-GCCTTCGGGACTTAGCCCGGATATAGTA
* * * *
159232194 ACTCGCACGAATGCCTTCGGGACTTAACCCGGGTTTAGTA
1 ACTCGCAC-AAAGCCTTCGGGACTTAGCCCGGATATAGTA
* *
159232234 ACTCGCACAAATGCCTTCGGG-CTTAGCCCGGATTTATTA
1 ACTCGCACAAA-GCCTTCGGGACTTAGCCCGGATATAGTA
* * *
159232273 ACTCGCACGAACGCCTTC-GGATCTTAGTCCGGATATAGTC
1 ACTCGCAC-AAAGCCTTCGGGA-CTTAGCCCGGATATAGTA
*
159232313 ACTTAGCACAAAGCCTTCGGGACTTAGCCCGGA
1 AC-TCGCACAAAGCCTTCGGGACTTAGCCCGGA
159232346 CATCATTCAA
Statistics
Matches: 125, Mismatches: 20, Indels: 14
0.79 0.13 0.09
Matches are distributed among these distances:
38 2 0.02
39 31 0.25
40 82 0.66
41 10 0.08
ACGTcount: A:0.25, C:0.29, G:0.22, T:0.24
Consensus pattern (39 bp):
ACTCGCACAAAGCCTTCGGGACTTAGCCCGGATATAGTA
Found at i:159256431 original size:16 final size:18
Alignment explanation
Indices: 159256404--159256438 Score: 56
Period size: 17 Copynumber: 2.1 Consensus size: 18
159256394 ATTAGACTTG
159256404 AATTGAGAAAATT-ATTT
1 AATTGAGAAAATTAATTT
159256421 AATTG-GAAAATTAATTT
1 AATTGAGAAAATTAATTT
159256438 A
1 A
159256439 TCTAATTAAA
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
16 7 0.41
17 10 0.59
ACGTcount: A:0.49, C:0.00, G:0.11, T:0.40
Consensus pattern (18 bp):
AATTGAGAAAATTAATTT
Found at i:159257483 original size:1 final size:1
Alignment explanation
Indices: 159257477--159257502 Score: 52
Period size: 1 Copynumber: 26.0 Consensus size: 1
159257467 TTATGAAACC
159257477 AAAAAAAAAAAAAAAAAAAAAAAAAA
1 AAAAAAAAAAAAAAAAAAAAAAAAAA
159257503 GAGAATCCTA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
1 25 1.00
ACGTcount: A:1.00, C:0.00, G:0.00, T:0.00
Consensus pattern (1 bp):
A
Found at i:159261950 original size:41 final size:41
Alignment explanation
Indices: 159261905--159262022 Score: 98
Period size: 41 Copynumber: 3.1 Consensus size: 41
159261895 TGAAAGATAA
159261905 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
1 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
* * * * *
159261946 ATGTAGAC-AAG-AG-A-GC-T-A---C--GTGAAAGATA-A
1 ATGTAG-CTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
159261976 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
1 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
159262017 ATGTAG
1 ATGTAG
159262023 ACAAGAGAGC
Statistics
Matches: 54, Mismatches: 10, Indels: 26
0.60 0.11 0.29
Matches are distributed among these distances:
29 1 0.02
30 8 0.15
31 9 0.17
32 1 0.02
33 3 0.06
34 1 0.02
35 1 0.02
36 1 0.02
37 1 0.02
38 3 0.06
39 1 0.02
40 9 0.17
41 14 0.26
42 1 0.02
ACGTcount: A:0.32, C:0.18, G:0.29, T:0.21
Consensus pattern (41 bp):
ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
Found at i:159261961 original size:71 final size:71
Alignment explanation
Indices: 159261873--159262036 Score: 328
Period size: 71 Copynumber: 2.3 Consensus size: 71
159261863 GAGATGTATC
159261873 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
1 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
159261938 AGGACA
66 AGGACA
159261944 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
1 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
159262009 AGGACA
66 AGGACA
159262015 CCATGTAGACAAGAGAGCTACG
1 CCATGTAGACAAGAGAGCTACG
159262037 AGACAAATCG
Statistics
Matches: 93, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
71 93 1.00
ACGTcount: A:0.35, C:0.18, G:0.28, T:0.19
Consensus pattern (71 bp):
CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
AGGACA
Found at i:159270457 original size:41 final size:41
Alignment explanation
Indices: 159270412--159270529 Score: 98
Period size: 41 Copynumber: 3.1 Consensus size: 41
159270402 TGAAAGATAA
159270412 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
1 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
* * * * *
159270453 ATGTAGAC-AAG-AG-A-GC-T-A---C--GTGAAAGATA-A
1 ATGTAG-CTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
159270483 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
1 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
159270524 ATGTAG
1 ATGTAG
159270530 ACAAGAGAGC
Statistics
Matches: 54, Mismatches: 10, Indels: 26
0.60 0.11 0.29
Matches are distributed among these distances:
29 1 0.02
30 8 0.15
31 9 0.17
32 1 0.02
33 3 0.06
34 1 0.02
35 1 0.02
36 1 0.02
37 1 0.02
38 3 0.06
39 1 0.02
40 9 0.17
41 14 0.26
42 1 0.02
ACGTcount: A:0.32, C:0.18, G:0.29, T:0.21
Consensus pattern (41 bp):
ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
Found at i:159270468 original size:71 final size:71
Alignment explanation
Indices: 159270380--159270543 Score: 328
Period size: 71 Copynumber: 2.3 Consensus size: 71
159270370 GAGATGTATC
159270380 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
1 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
159270445 AGGACA
66 AGGACA
159270451 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
1 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
159270516 AGGACA
66 AGGACA
159270522 CCATGTAGACAAGAGAGCTACG
1 CCATGTAGACAAGAGAGCTACG
159270544 AGACAAATCG
Statistics
Matches: 93, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
71 93 1.00
ACGTcount: A:0.35, C:0.18, G:0.28, T:0.19
Consensus pattern (71 bp):
CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
AGGACA
Found at i:159275071 original size:41 final size:41
Alignment explanation
Indices: 159275026--159275143 Score: 98
Period size: 41 Copynumber: 3.1 Consensus size: 41
159275016 TGAAAGATAA
159275026 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
1 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
* * * * *
159275067 ATGTAGAC-AAG-AG-A-GC-T-A---C--GTGAAAGATA-A
1 ATGTAG-CTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
159275097 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
1 ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
159275138 ATGTAG
1 ATGTAG
159275144 ACAAGAGAGC
Statistics
Matches: 54, Mismatches: 10, Indels: 26
0.60 0.11 0.29
Matches are distributed among these distances:
29 1 0.02
30 8 0.15
31 9 0.17
32 1 0.02
33 3 0.06
34 1 0.02
35 1 0.02
36 1 0.02
37 1 0.02
38 3 0.06
39 1 0.02
40 9 0.17
41 14 0.26
42 1 0.02
ACGTcount: A:0.32, C:0.18, G:0.29, T:0.21
Consensus pattern (41 bp):
ATGTAGCTAGGTCGCATGCGTGATTCCAAGTGAAGGACACC
Found at i:159275082 original size:71 final size:71
Alignment explanation
Indices: 159274994--159275157 Score: 328
Period size: 71 Copynumber: 2.3 Consensus size: 71
159274984 GAGATGTATC
159274994 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
1 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
159275059 AGGACA
66 AGGACA
159275065 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
1 CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
159275130 AGGACA
66 AGGACA
159275136 CCATGTAGACAAGAGAGCTACG
1 CCATGTAGACAAGAGAGCTACG
159275158 AGACAAATCG
Statistics
Matches: 93, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
71 93 1.00
ACGTcount: A:0.35, C:0.18, G:0.28, T:0.19
Consensus pattern (71 bp):
CCATGTAGACAAGAGAGCTACGTGAAAGATAAATGTAGCTAGGTCGCATGCGTGATTCCAAGTGA
AGGACA
Found at i:159282705 original size:101 final size:101
Alignment explanation
Indices: 159282515--159282739 Score: 285
Period size: 101 Copynumber: 2.2 Consensus size: 101
159282505 GACACTGAGC
** *
159282515 TGTGAATTCCGATATATGATGTGCGATTAAGACCATGGAATCGATGTGTGATTCCTATACATGTG
1 TGTG-ATTCCGATATATGATGTGCGAGCAAGACCATGGAATCGATATGTGATTCCTATACATGTG
* *
159282580 CGCGAGTAAGACCACGTTTAATACGTTGGCATC-AATA
65 CGCGAATAAGACCACATTTAATACGTTGGCATCGAA-A
* * * *
159282617 TGTGATTCCGATATGTGATGTGTGAGCAAGACCATGGCATCGATATGTGATT-CTGATATATGTG
1 TGTGATTCCGATATATGATGTGCGAGCAAGACCATGGAATCGATATGTGATTCCT-ATACATGTG
* * * *
159282681 TGTGAATAAGTCCACATTTTATACGTTGGCATCGAAA
65 CGCGAATAAGACCACATTTAATACGTTGGCATCGAAA
159282718 TGTGATTCCGATATATG-TGTGC
1 TGTGATTCCGATATATGATGTGC
159282740 AAGTAAAACC
Statistics
Matches: 106, Mismatches: 15, Indels: 6
0.83 0.12 0.05
Matches are distributed among these distances:
100 6 0.06
101 94 0.89
102 6 0.06
ACGTcount: A:0.28, C:0.15, G:0.24, T:0.33
Consensus pattern (101 bp):
TGTGATTCCGATATATGATGTGCGAGCAAGACCATGGAATCGATATGTGATTCCTATACATGTGC
GCGAATAAGACCACATTTAATACGTTGGCATCGAAA
Found at i:159282755 original size:56 final size:55
Alignment explanation
Indices: 159282651--159282780 Score: 147
Period size: 56 Copynumber: 2.3 Consensus size: 55
159282641 AGCAAGACCA
* * ** *
159282651 TGGCATCGATATGTGATTCTGATATATGTGTGTGAATAAGTCCACATTT-TATACG
1 TGGCATCGATATGTGATTCCGATATATGTGTGTCAATAAAACCACATTTGGATA-G
* *
159282706 TTGGCATCGAAATGTGATTCCGATATATGTGTG-CAAGTAAAACCCCATTTGGGATAG
1 -TGGCATCGATATGTGATTCCGATATATGTGTGTCAA-TAAAACCACATTT-GGATAG
159282763 TGGCATCGATATGTGATT
1 TGGCATCGATATGTGATT
159282781 ACATATAAGA
Statistics
Matches: 63, Mismatches: 8, Indels: 6
0.82 0.10 0.08
Matches are distributed among these distances:
55 2 0.03
56 57 0.90
57 1 0.02
58 3 0.05
ACGTcount: A:0.28, C:0.14, G:0.24, T:0.35
Consensus pattern (55 bp):
TGGCATCGATATGTGATTCCGATATATGTGTGTCAATAAAACCACATTTGGATAG
Found at i:159287837 original size:18 final size:17
Alignment explanation
Indices: 159287814--159287847 Score: 50
Period size: 18 Copynumber: 1.9 Consensus size: 17
159287804 CAGGGGAAAG
*
159287814 AAAGAAGGAAGGAAAAAA
1 AAAGAAAGAA-GAAAAAA
159287832 AAAGAAAGAAGAAAAA
1 AAAGAAAGAAGAAAAA
159287848 GGGAAAAATT
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 6 0.40
18 9 0.60
ACGTcount: A:0.76, C:0.00, G:0.24, T:0.00
Consensus pattern (17 bp):
AAAGAAAGAAGAAAAAA
Found at i:159290176 original size:138 final size:138
Alignment explanation
Indices: 159289928--159290296 Score: 515
Period size: 138 Copynumber: 2.6 Consensus size: 138
159289918 GTGTGCTCTC
** * * * * **
159289928 TGATATGAAATGTGTAAGACCATGGTTGAAAGGTACCATGGCAACCTGATATGAAATGTGTAAGA
1 TGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAACATGACATGAAAAGAATAAGA
* **
159289993 CCATGGTTAAAAGATACCATGGCAACCTAATATGAAATGTGTAAGACCATGGTTGAAAGATACCA
66 CCATGGTTGAAAGATACCATGGCAACCTAATATGAAATGAATAAGACCATGGTTGAAAGATACCA
159290058 TGGCAACG
131 TGGCAACG
*
159290066 TGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAACGTGACATGAAAAGAATAAGA
1 TGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAACATGACATGAAAAGAATAAGA
* *
159290131 CCATGGTTGAAAGATACCATGGCAACCTGATATGCAATGAATAAGACCATGGTTGAAAGATACCA
66 CCATGGTTGAAAGATACCATGGCAACCTAATATGAAATGAATAAGACCATGGTTGAAAGATACCA
159290196 TGGCAACG
131 TGGCAACG
* *
159290204 TGACATGAAAAGAATAAGACCATGGTTGAAAGATACCATGGCAACATGACA-GAAAATGAATGAG
1 TGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAACATGACATGAAAA-G-A--A-
* * *
159290268 TAAGACCATAGTTGAAAGACACTATGGCA
61 TAAGACCATGGTTGAAAGATACCATGGCA
159290297 TCATGTCAAA
Statistics
Matches: 207, Mismatches: 19, Indels: 6
0.89 0.08 0.03
Matches are distributed among these distances:
137 5 0.02
138 174 0.84
139 1 0.00
141 1 0.00
142 26 0.13
ACGTcount: A:0.41, C:0.15, G:0.23, T:0.21
Consensus pattern (138 bp):
TGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAACATGACATGAAAAGAATAAGA
CCATGGTTGAAAGATACCATGGCAACCTAATATGAAATGAATAAGACCATGGTTGAAAGATACCA
TGGCAACG
Found at i:159290254 original size:46 final size:46
Alignment explanation
Indices: 159289927--159290248 Score: 491
Period size: 46 Copynumber: 7.0 Consensus size: 46
159289917 AGTGTGCTCT
** *
159289927 CTGATATGAAATGTGTAAGACCATGGTTGAAAGGTACCATGGCAAC
1 CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
** *
159289973 CTGATATGAAATGTGTAAGACCATGGTTAAAAGATACCATGGCAAC
1 CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
* **
159290019 CTAATATGAAATGTGTAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
*
159290065 GTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
* * *
159290111 GTGACATGAAAAGAATAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
*
159290157 CTGATATGCAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
* * *
159290203 GTGACATGAAAAGAATAAGACCATGGTTGAAAGATACCATGGCAAC
1 CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
159290249 ATGACAGAAA
Statistics
Matches: 258, Mismatches: 18, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
46 258 1.00
ACGTcount: A:0.40, C:0.15, G:0.23, T:0.21
Consensus pattern (46 bp):
CTGATATGAAATGAATAAGACCATGGTTGAAAGATACCATGGCAAC
Found at i:159290308 original size:92 final size:91
Alignment explanation
Indices: 159289942--159290296 Score: 395
Period size: 92 Copynumber: 3.8 Consensus size: 91
159289932 ATGAAATGTG
* * *
159289942 TAAGACCATGGTTGAAAGGTACCATGGCAACCTGATATGAAATG--TG-TAAGACCATGGTTAAA
1 TAAGACCATGGTTGAAAGATACCATGGCAA-CTGACA-GAAATGAATGATAAGACCATGGTTGAA
* * **
159290004 AGATACCATGGCAACCTAATATGAAATGTG
64 AGATACCATGGCAA-CT-ACATGAAAAGAA
*
159290034 TAAGACCATGGTTGAAAGATACCATGGCAACGTGATATGAAATG-A--ATAAGACCATGGTTGAA
1 TAAGACCATGGTTGAAAGATACCATGGCAAC-TGACA-GAAATGAATGATAAGACCATGGTTGAA
159290096 AGATACCATGGCAACGTGACATGAAAAGAA
64 AGATACCATGGCAAC-T-ACATGAAAAGAA
* *
159290126 TAAGACCATGGTTGAAAGATACCATGGCAAC---CTGATATGCAATGAATAAGACCATGGTTGAA
1 TAAGACCATGGTTGAAAGATACCATGGCAACTGACAGAAATG-AATG-ATAAGACCATGGTTGAA
159290188 AGATACCATGGCAACGTGACATGAAAAGAA
64 AGATACCATGGCAAC-T-ACATGAAAAGAA
*
159290218 TAAGACCATGGTTGAAAGATACCATGGCAACATGACAGAAAATGAATGAGTAAGACCATAGTTGA
1 TAAGACCATGGTTGAAAGATACCATGGCAAC-TGACAG-AAATGAATGA-TAAGACCATGGTTGA
* *
159290283 AAGACACTATGGCA
63 AAGATACCATGGCA
159290297 TCATGTCAAA
Statistics
Matches: 233, Mismatches: 15, Indels: 26
0.85 0.05 0.09
Matches are distributed among these distances:
87 5 0.02
89 1 0.00
91 2 0.01
92 188 0.81
95 1 0.00
96 32 0.14
97 4 0.02
ACGTcount: A:0.41, C:0.15, G:0.23, T:0.21
Consensus pattern (91 bp):
TAAGACCATGGTTGAAAGATACCATGGCAACTGACAGAAATGAATGATAAGACCATGGTTGAAAG
ATACCATGGCAACTACATGAAAAGAA
Found at i:159292422 original size:31 final size:30
Alignment explanation
Indices: 159292350--159292462 Score: 124
Period size: 31 Copynumber: 3.7 Consensus size: 30
159292340 TTAGTCTTGA
*
159292350 CATATACTGGGCCGAAGCC-TTTCGTTTAA-
1 CATATACTGGGCCGAAGCCTTTTC-ATTAAT
159292379 CGAT-TACTGGGCCGAAGCCTTTTCATTAAT
1 C-ATATACTGGGCCGAAGCCTTTTCATTAAT
* *
159292409 CATATCACTGGGCCAAAGCCTTTTCATAAAT
1 CATAT-ACTGGGCCGAAGCCTTTTCATTAAT
* *
159292440 CATTTCACTGGGCTGAAGCCTTT
1 CATAT-ACTGGGCCGAAGCCTTT
159292463 ACTGTAAACG
Statistics
Matches: 73, Mismatches: 6, Indels: 8
0.84 0.07 0.09
Matches are distributed among these distances:
29 22 0.30
30 8 0.11
31 43 0.59
ACGTcount: A:0.25, C:0.25, G:0.19, T:0.32
Consensus pattern (30 bp):
CATATACTGGGCCGAAGCCTTTTCATTAAT
Found at i:159292534 original size:42 final size:42
Alignment explanation
Indices: 159292487--159292577 Score: 137
Period size: 42 Copynumber: 2.2 Consensus size: 42
159292477 GGCCTATAGG
* ** *
159292487 CCCATTTCAATATCACATGTAATGTCAATGGATGTATGCAAA
1 CCCATTTCAATATCACATGAAATACCAATGAATGTATGCAAA
*
159292529 CCCATTTCAATATCACATGAAATACCAATGAATGTATGCAAG
1 CCCATTTCAATATCACATGAAATACCAATGAATGTATGCAAA
159292571 CCCATTT
1 CCCATTT
159292578 GGGGAGACTA
Statistics
Matches: 44, Mismatches: 5, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
42 44 1.00
ACGTcount: A:0.36, C:0.22, G:0.12, T:0.30
Consensus pattern (42 bp):
CCCATTTCAATATCACATGAAATACCAATGAATGTATGCAAA
Found at i:159292774 original size:26 final size:26
Alignment explanation
Indices: 159292722--159292845 Score: 178
Period size: 26 Copynumber: 4.8 Consensus size: 26
159292712 CCTCTTTAAT
* ***
159292722 AACTTGGGCA-AAGCCCTTTTTGGTA
1 AACTGGGGCATAAGCCCTTTTCAATA
*
159292747 AACTGGGGCATAAACCCTTTTCAATA
1 AACTGGGGCATAAGCCCTTTTCAATA
159292773 AACTGGGGCATAAGCCCTTTTCAATA
1 AACTGGGGCATAAGCCCTTTTCAATA
**
159292799 AACTGGGGCATAAGCCCTTTTCGGTA
1 AACTGGGGCATAAGCCCTTTTCAATA
159292825 AACTGGGGCATAAGCCCTTTT
1 AACTGGGGCATAAGCCCTTTT
159292846 GCACTTCCTC
Statistics
Matches: 90, Mismatches: 8, Indels: 1
0.91 0.08 0.01
Matches are distributed among these distances:
25 9 0.10
26 81 0.90
ACGTcount: A:0.27, C:0.23, G:0.22, T:0.28
Consensus pattern (26 bp):
AACTGGGGCATAAGCCCTTTTCAATA
Found at i:159293654 original size:27 final size:27
Alignment explanation
Indices: 159293624--159293724 Score: 118
Period size: 27 Copynumber: 3.7 Consensus size: 27
159293614 GGGCATATTC
*
159293624 GTCATTTTACCAC-ATAGGGG-TATTACG
1 GTCACTTTACC-CTATAGGGGCT-TTACG
159293651 GTCACTTTACCCTATAGGGGCTTTACG
1 GTCACTTTACCCTATAGGGGCTTTACG
*
159293678 GTCACTTTACCCTACAGGGGCTTTACG
1 GTCACTTTACCCTATAGGGGCTTTACG
**
159293705 GTCTTTTTA-CCTCATAGGGG
1 GTCACTTTACCCT-ATAGGGG
159293725 TATTTTAGTC
Statistics
Matches: 66, Mismatches: 5, Indels: 6
0.86 0.06 0.08
Matches are distributed among these distances:
26 4 0.06
27 61 0.92
28 1 0.02
ACGTcount: A:0.20, C:0.24, G:0.23, T:0.34
Consensus pattern (27 bp):
GTCACTTTACCCTATAGGGGCTTTACG
Found at i:159293799 original size:27 final size:27
Alignment explanation
Indices: 159293746--159293984 Score: 181
Period size: 27 Copynumber: 8.8 Consensus size: 27
159293736 TTTCATCCTA
* * * *
159293746 CAAGGGTGTTTTGGTAAATGTACAAAC
1 CAAGGGTATTTCGGTAATTTTACAAAC
* * **
159293773 CAAAGGTATTTCAGTAATTTTGTAAAC
1 CAAGGGTATTTCGGTAATTTTACAAAC
* ** * *
159293800 CAATGGTATTTCTATAATTTTTATAAAGT
1 CAAGGGTATTTCGGTAA-TTTTACAAA-C
* * ** *
159293829 CAAGGGTATTTCTGTAACTTTGTAAAT
1 CAAGGGTATTTCGGTAATTTTACAAAC
* * * *
159293856 TAGGGGTATTTTGGTAATTTTACAAAT
1 CAAGGGTATTTCGGTAATTTTACAAAC
** *
159293883 TGAGGGTATTTCGGTAATTTCACAAAC
1 CAAGGGTATTTCGGTAATTTTACAAAC
*
159293910 CAAGGGTATTTTGGTAATTTTACAAAC
1 CAAGGGTATTTCGGTAATTTTACAAAC
* * *
159293937 TAGGGGTATTTTGGTAATTTTACAAAC
1 CAAGGGTATTTCGGTAATTTTACAAAC
**
159293964 CAAGGGTATTTTAGTAATTTT
1 CAAGGGTATTTCGGTAATTTT
159293985 GTAAATAGAG
Statistics
Matches: 172, Mismatches: 38, Indels: 4
0.80 0.18 0.02
Matches are distributed among these distances:
27 142 0.83
28 15 0.09
29 15 0.09
ACGTcount: A:0.32, C:0.09, G:0.19, T:0.40
Consensus pattern (27 bp):
CAAGGGTATTTCGGTAATTTTACAAAC
Found at i:159293917 original size:54 final size:54
Alignment explanation
Indices: 159293859--159293998 Score: 201
Period size: 54 Copynumber: 2.6 Consensus size: 54
159293849 TGTAAATTAG
159293859 GGGTATTTTGGTAATTTTACAAATTGAGGGTATTTCGGTAATTTCACAAACCAA
1 GGGTATTTTGGTAATTTTACAAATTGAGGGTATTTCGGTAATTTCACAAACCAA
* * *
159293913 GGGTATTTTGGTAATTTTACAAACT-AGGGGTATTTTGGTAATTTTACAAACCAA
1 GGGTATTTTGGTAATTTTACAAATTGA-GGGTATTTCGGTAATTTCACAAACCAA
* ** *
159293967 GGGTATTTTAGTAATTTTGTAAATAGAGGGTA
1 GGGTATTTTGGTAATTTTACAAATTGAGGGTA
159293999 AAACAGTAAT
Statistics
Matches: 76, Mismatches: 8, Indels: 4
0.86 0.09 0.05
Matches are distributed among these distances:
53 1 0.01
54 74 0.97
55 1 0.01
ACGTcount: A:0.31, C:0.08, G:0.22, T:0.39
Consensus pattern (54 bp):
GGGTATTTTGGTAATTTTACAAATTGAGGGTATTTCGGTAATTTCACAAACCAA
Found at i:159293970 original size:81 final size:82
Alignment explanation
Indices: 159293746--159293983 Score: 221
Period size: 81 Copynumber: 2.9 Consensus size: 82
159293736 TTTCATCCTA
* * * ** ** ** *
159293746 CAAGGGTGTTTTGGTAAATGTACAAACCAAAGGTATTTCAGTAATTTTGTAAACCAATGGTATTT
1 CAAGGGTATTTTGGTAAATTTACAAACTAGGGGTATTTTGGTAATTTTACAAACCAAGGGTATTT
* * *
159293811 CTA-TAATTTTTATAAAGT
66 C-AGTAA-TTTCACAAAGC
* ** * ***
159293829 CAAGGGTATTTCT-GTAACTTTGTAAATTAGGGGTATTTTGGTAATTTTACAAATTGAGGGTATT
1 CAAGGGTATTT-TGGTAAATTTACAAACTAGGGGTATTTTGGTAATTTTACAAACCAAGGGTATT
*
159293893 TCGGTAATTTCACAAA-C
65 TCAGTAATTTCACAAAGC
*
159293910 CAAGGGTATTTTGGTAATTTTACAAACTAGGGGTATTTTGGTAATTTTACAAACCAAGGGTATTT
1 CAAGGGTATTTTGGTAAATTTACAAACTAGGGGTATTTTGGTAATTTTACAAACCAAGGGTATTT
*
159293975 TAGTAATTT
66 CAGTAATTT
159293984 TGTAAATAGA
Statistics
Matches: 122, Mismatches: 30, Indels: 8
0.76 0.19 0.05
Matches are distributed among these distances:
80 1 0.01
81 63 0.52
82 7 0.06
83 50 0.41
84 1 0.01
ACGTcount: A:0.32, C:0.09, G:0.19, T:0.39
Consensus pattern (82 bp):
CAAGGGTATTTTGGTAAATTTACAAACTAGGGGTATTTTGGTAATTTTACAAACCAAGGGTATTT
CAGTAATTTCACAAAGC
Found at i:159294006 original size:27 final size:27
Alignment explanation
Indices: 159293977--159294187 Score: 280
Period size: 27 Copynumber: 7.8 Consensus size: 27
159293967 GGGTATTTTA
* * *
159293977 GTAATTTTGTAAATAGAGGGTAAAACA
1 GTAATTCTGTAAATCGAGGGTAAAACG
* * *
159294004 GTAATTTTGTAAATCAAGGGTAAAACA
1 GTAATTCTGTAAATCGAGGGTAAAACG
*
159294031 GTAATTCTATAAATCGAGGGTAAAACG
1 GTAATTCTGTAAATCGAGGGTAAAACG
*
159294058 GTAATTCAGTAAATCGAGGGTAAAACG
1 GTAATTCTGTAAATCGAGGGTAAAACG
*
159294085 GTAATTCTGTAAGTCGAGGGTAAAACG
1 GTAATTCTGTAAATCGAGGGTAAAACG
* *
159294112 ATAATTATGTAAATCG-GAGGTAAAACG
1 GTAATTCTGTAAATCGAG-GGTAAAACG
* *
159294139 GTAATTATGTAAATCGGGGGTAAAACG
1 GTAATTCTGTAAATCGAGGGTAAAACG
*
159294166 GTAATTCTGTAAATCGGGGGTA
1 GTAATTCTGTAAATCGAGGGTA
159294188 CTTTGGTAAT
Statistics
Matches: 167, Mismatches: 15, Indels: 4
0.90 0.08 0.02
Matches are distributed among these distances:
26 1 0.01
27 165 0.99
28 1 0.01
ACGTcount: A:0.39, C:0.09, G:0.25, T:0.27
Consensus pattern (27 bp):
GTAATTCTGTAAATCGAGGGTAAAACG
Found at i:159294008 original size:54 final size:54
Alignment explanation
Indices: 159293859--159294063 Score: 178
Period size: 54 Copynumber: 3.8 Consensus size: 54
159293849 TGTAAATTAG
* * *** *
159293859 GGGTATTTTGGTAATTTTACAAATTGAGGGTATTTCGGTAATTTCACAAACCAA
1 GGGTATTTTAGTAATTTTACAAATAGAGGGTAAAACGGTAATTTTACAAACCAA
* ****
159293913 GGGTATTTTGGTAATTTTACAAACTAG-GGGTATTTTGGTAATTTTACAAACCAA
1 GGGTATTTTAGTAATTTTACAAA-TAGAGGGTAAAACGGTAATTTTACAAACCAA
** * ** *
159293967 GGGTATTTTAGTAATTTTGTAAATAGAGGGTAAAACAGTAATTTTGTAAATCAA
1 GGGTATTTTAGTAATTTTACAAATAGAGGGTAAAACGGTAATTTTACAAACCAA
**** * * *
159294021 GGGTAAAACAGTAATTCTATAAATCGAGGGTAAAACGGTAATT
1 GGGTATTTTAGTAATTTTACAAATAGAGGGTAAAACGGTAATT
159294064 CAGTAAATCG
Statistics
Matches: 127, Mismatches: 22, Indels: 4
0.83 0.14 0.03
Matches are distributed among these distances:
53 3 0.02
54 122 0.96
55 2 0.02
ACGTcount: A:0.36, C:0.08, G:0.21, T:0.35
Consensus pattern (54 bp):
GGGTATTTTAGTAATTTTACAAATAGAGGGTAAAACGGTAATTTTACAAACCAA
Found at i:159294035 original size:81 final size:81
Alignment explanation
Indices: 159293950--159294180 Score: 189
Period size: 81 Copynumber: 2.9 Consensus size: 81
159293940 GGGTATTTTG
* **** ** *
159293950 GTAATTTTACAAACCAAGGGTATTTTAGTAATTTTGTAAATAGAGGGTAAAACAGTAATTTTGTA
1 GTAATTCTACAAACCAAGGGTAAAACAGTAATTCAGTAAATAGAGGGTAAAACAGTAATTCTGTA
159294015 AATCAAGGGTAAAACA
66 AATCAAGGGTAAAACA
* * * * * *
159294031 GTAATTCTATAAATCGAGGGTAAAACGGTAATTCAGTAAATCGAGGGTAAAACGGTAATTCTGTA
1 GTAATTCTACAAACCAAGGGTAAAACAGTAATTCAGTAAATAGAGGGTAAAACAGTAATTCTGTA
* *
159294096 AGTCGAGGGTAAAAC-
66 AATCAAGGGTAAAACA
* ** * * * * * *
159294111 GATAATTATGTAAATC-GGAGGTAAAACGGTAATT-ATGTAAATCGGGGGTAAAACGGTAATTCT
1 G-TAATTCTACAAACCAAG-GGTAAAACAGTAATTCA-GTAAATAGAGGGTAAAACAGTAATTCT
159294174 GTAAATC
63 GTAAATC
159294181 GGGGGTACTT
Statistics
Matches: 126, Mismatches: 21, Indels: 6
0.82 0.14 0.04
Matches are distributed among these distances:
80 3 0.02
81 123 0.98
ACGTcount: A:0.40, C:0.09, G:0.23, T:0.29
Consensus pattern (81 bp):
GTAATTCTACAAACCAAGGGTAAAACAGTAATTCAGTAAATAGAGGGTAAAACAGTAATTCTGTA
AATCAAGGGTAAAACA
Found at i:159294214 original size:27 final size:27
Alignment explanation
Indices: 159294193--159294282 Score: 112
Period size: 27 Copynumber: 3.3 Consensus size: 27
159294183 GGGTACTTTG
*
159294193 GTAATTTTACAAGTCGAAGGTATTTCA
1 GTAATTTTACAAATCGAAGGTATTTCA
159294220 GTAATTTTACAAATCG-AGGATATTTCA
1 GTAATTTTACAAATCGAAGG-TATTTCA
* * *
159294247 GTATTTTTACAAA-CTAAGGGTATTTCG
1 GTAATTTTACAAATCGAA-GGTATTTCA
159294274 GTAATTTTA
1 GTAATTTTA
159294283 GTAAACTAAA
Statistics
Matches: 55, Mismatches: 5, Indels: 6
0.83 0.08 0.09
Matches are distributed among these distances:
26 4 0.07
27 49 0.89
28 2 0.04
ACGTcount: A:0.33, C:0.10, G:0.17, T:0.40
Consensus pattern (27 bp):
GTAATTTTACAAATCGAAGGTATTTCA
Found at i:159294225 original size:81 final size:80
Alignment explanation
Indices: 159293976--159294214 Score: 241
Period size: 81 Copynumber: 3.0 Consensus size: 80
159293966 AGGGTATTTT
* * * * * *
159293976 AGTAATTTTGTAAATAGAGGGTAAAACAGTAATTTTGTAAATCAAGGGTAAAACAGTAATTCTAT
1 AGTAATTATGTAAATCGAGGGTAAAACGGTAATTCTGTAAATCGAGGGTAAAACGGTAATT-T-T
*
159294041 A-AATCGAGGGTAAAAC
64 ACAATCGAAGGTAAAAC
* * *
159294057 GGTAATTCA-GTAAATCGAGGGTAAAACGGTAATTCTGTAAGTCGAGGGTAAAACGATAATTATG
1 AGTAATT-ATGTAAATCGAGGGTAAAACGGTAATTCTGTAAATCGAGGGTAAAACGGTAATT-T-
*
159294121 TA-AATCGGAGGTAAAAC
63 TACAATCGAAGGTAAAAC
* * * ****
159294138 GGTAATTATGTAAATCGGGGGTAAAACGGTAATTCTGTAAATCGGGGGTACTTTGGTAATTTTAC
1 AGTAATTATGTAAATCGAGGGTAAAACGGTAATTCTGTAAATCGAGGGTAAAACGGTAATTTTAC
159294203 AAGTCGAAGGTA
66 AA-TCGAAGGTA
159294215 TTTCAGTAAT
Statistics
Matches: 132, Mismatches: 22, Indels: 8
0.81 0.14 0.05
Matches are distributed among these distances:
79 2 0.02
80 4 0.03
81 126 0.95
ACGTcount: A:0.38, C:0.09, G:0.25, T:0.28
Consensus pattern (80 bp):
AGTAATTATGTAAATCGAGGGTAAAACGGTAATTCTGTAAATCGAGGGTAAAACGGTAATTTTAC
AATCGAAGGTAAAAC
Found at i:159294296 original size:27 final size:27
Alignment explanation
Indices: 159294193--159294297 Score: 90
Period size: 27 Copynumber: 3.9 Consensus size: 27
159294183 GGGTACTTTG
* *
159294193 GTAATTTTACAAGTCGAAG-GTATTTCA
1 GTAATTTTACAA-ACTAAGAGTATTTCA
* *
159294220 GTAATTTTACAAATCGAGGA-TATTTCA
1 GTAATTTTACAAA-CTAAGAGTATTTCA
* * *
159294247 GTATTTTTACAAACTAAGGGTATTTCG
1 GTAATTTTACAAACTAAGAGTATTTCA
*
159294274 GTAATTTTAGTAAACTAA-AGTATT
1 GTAATTTTA-CAAACTAAGAGTATT
159294298 CTAAATAGGG
Statistics
Matches: 64, Mismatches: 10, Indels: 8
0.78 0.12 0.10
Matches are distributed among these distances:
26 3 0.05
27 54 0.84
28 7 0.11
ACGTcount: A:0.35, C:0.10, G:0.16, T:0.39
Consensus pattern (27 bp):
GTAATTTTACAAACTAAGAGTATTTCA
Found at i:159296797 original size:2 final size:2
Alignment explanation
Indices: 159296790--159296820 Score: 62
Period size: 2 Copynumber: 15.5 Consensus size: 2
159296780 ATACAGCCGA
159296790 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
159296821 ACACCATCAC
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 29 1.00
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (2 bp):
AT
Found at i:159296912 original size:2 final size:2
Alignment explanation
Indices: 159296907--159296948 Score: 75
Period size: 2 Copynumber: 21.0 Consensus size: 2
159296897 CCTAATCAAC
*
159296907 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT TT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
159296949 GCATAGTGCA
Statistics
Matches: 38, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
2 38 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
AT
Found at i:159299199 original size:9 final size:9
Alignment explanation
Indices: 159299185--159299210 Score: 52
Period size: 9 Copynumber: 2.9 Consensus size: 9
159299175 AATGAAGAAC
159299185 AAATGAATA
1 AAATGAATA
159299194 AAATGAATA
1 AAATGAATA
159299203 AAATGAAT
1 AAATGAAT
159299211 TTGACGACTT
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 17 1.00
ACGTcount: A:0.65, C:0.00, G:0.12, T:0.23
Consensus pattern (9 bp):
AAATGAATA
Found at i:159302459 original size:40 final size:40
Alignment explanation
Indices: 159302411--159302552 Score: 135
Period size: 40 Copynumber: 3.5 Consensus size: 40
159302401 AAATTGAATG
* **
159302411 ATATCCGGGCTAAGCCCCGAAGACAATTATGCT-GAAATTT
1 ATATCCGGGCTAAGACCCGAAGACAATTATGCTAG-AAGCT
* * * *
159302451 ATATCCGGGTTAAGACCCGAAGGCAATTGTGCTAGTAGCT
1 ATATCCGGGCTAAGACCCGAAGACAATTATGCTAGAAGCT
* * * ** *
159302491 ATATCCGGGCTAAGACCCGAAGGC-ATTCGTGCGAGTTGAT
1 ATATCCGGGCTAAGACCCGAAGACAATT-ATGCTAGAAGCT
159302531 ATATCCGGGCTAAGACCCGAAG
1 ATATCCGGGCTAAGACCCGAAG
159302553 GCCTTTGTGC
Statistics
Matches: 89, Mismatches: 11, Indels: 4
0.86 0.11 0.04
Matches are distributed among these distances:
39 3 0.03
40 85 0.96
41 1 0.01
ACGTcount: A:0.29, C:0.23, G:0.26, T:0.23
Consensus pattern (40 bp):
ATATCCGGGCTAAGACCCGAAGACAATTATGCTAGAAGCT
Found at i:159302545 original size:80 final size:80
Alignment explanation
Indices: 159302450--159302618 Score: 223
Period size: 80 Copynumber: 2.1 Consensus size: 80
159302440 TGCTGAAATT
* * * *
159302450 TATATCCGGGTTAAGACCCGAAGGCAATTGTGCTAGT-AGCTATATCCGGGCTAAGACCCGAAGG
1 TATATCCGGGCTAAGACCCGAAGGCAATTGTGCAAGTCA-CCAAATCCGGGCTAAGACCCGAAGG
* *
159302514 CATTCGTGCGAGTTGA
65 CAATCGTGCGAGTCGA
** * *
159302530 TATATCCGGGCTAAGACCCGAAGGCCTTTGTGCAAGTCACCAAATCCGGGTTATGACCCGAAGGC
1 TATATCCGGGCTAAGACCCGAAGGCAATTGTGCAAGTCACCAAATCCGGGCTAAGACCCGAAGGC
*
159302595 AATCGTGCGAGTCGC
66 AATCGTGCGAGTCGA
159302610 TATATCCGG
1 TATATCCGG
159302619 TTAAATCCCG
Statistics
Matches: 77, Mismatches: 11, Indels: 2
0.86 0.12 0.02
Matches are distributed among these distances:
80 76 0.99
81 1 0.01
ACGTcount: A:0.25, C:0.24, G:0.28, T:0.22
Consensus pattern (80 bp):
TATATCCGGGCTAAGACCCGAAGGCAATTGTGCAAGTCACCAAATCCGGGCTAAGACCCGAAGGC
AATCGTGCGAGTCGA
Found at i:159302553 original size:40 final size:40
Alignment explanation
Indices: 159302450--159302618 Score: 171
Period size: 40 Copynumber: 4.2 Consensus size: 40
159302440 TGCTGAAATT
* * * *
159302450 TATATCCGGGTTAAGACCCGAAGGCAATT-GTGCTAGTAGC
1 TATATCCGGGCTAAGACCCGAAGGC-ATTCGTGCGAGTTGA
159302490 TATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTTGA
1 TATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTTGA
* * * *
159302530 TATATCCGGGCTAAGACCCGAAGGCCTTTGTGCAAG-TCA
1 TATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTTGA
* * * * * * *
159302569 CCAAATCCGGGTTATGACCCGAAGGCAATCGTGCGAGTCGC
1 -TATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTTGA
159302610 TATATCCGG
1 TATATCCGG
159302619 TTAAATCCCG
Statistics
Matches: 105, Mismatches: 21, Indels: 6
0.80 0.16 0.05
Matches are distributed among these distances:
39 5 0.05
40 100 0.95
ACGTcount: A:0.25, C:0.24, G:0.28, T:0.22
Consensus pattern (40 bp):
TATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTTGA
Found at i:159310510 original size:40 final size:40
Alignment explanation
Indices: 159310444--159310547 Score: 138
Period size: 40 Copynumber: 2.6 Consensus size: 40
159310434 AAATTGAATG
* * *
159310444 ATATCCGGGCTAAG-CCCGAAGACAATTATGCTGGAAATT
1 ATATCCGGGCTAAGACCCGAAGGCAATTATGCTAGAAACT
* * * *
159310483 ATATCCGGGTTAAGACCCGAAGGCAATTGTGCTAGTAGCT
1 ATATCCGGGCTAAGACCCGAAGGCAATTATGCTAGAAACT
159310523 ATATCCGGGCTAAGACCCGAAGGCA
1 ATATCCGGGCTAAGACCCGAAGGCA
159310548 TTCGTGCGTT
Statistics
Matches: 56, Mismatches: 8, Indels: 1
0.86 0.12 0.02
Matches are distributed among these distances:
39 13 0.23
40 43 0.77
ACGTcount: A:0.31, C:0.22, G:0.26, T:0.21
Consensus pattern (40 bp):
ATATCCGGGCTAAGACCCGAAGGCAATTATGCTAGAAACT
Found at i:159310571 original size:35 final size:36
Alignment explanation
Indices: 159310485--159310613 Score: 129
Period size: 35 Copynumber: 3.5 Consensus size: 36
159310475 TGGAAATTAT
* *
159310485 ATCCGGGTTAAGACCCGAAGGCAATTGTGCTAGTAGCTAT
1 ATCCGGGCTAAGACCCGAAGGC-ATTGTGC-AGTA--TAA
159310525 ATCCGGGCTAAGACCCGAAGGCATTCGTGC-GT-TAA
1 ATCCGGGCTAAGACCCGAAGGCATT-GTGCAGTATAA
*
159310560 ATCCGGGCTAAGACCCGAAGGCATTTGTGCA-AATCAA
1 ATCCGGGCTAAGACCCGAAGGCA-TTGTGCAGTAT-AA
* *
159310597 ATCCGGGTTAATACCCG
1 ATCCGGGCTAAGACCCG
159310614 GGCTATGTGC
Statistics
Matches: 79, Mismatches: 5, Indels: 13
0.81 0.05 0.13
Matches are distributed among these distances:
35 29 0.37
36 3 0.04
37 17 0.22
38 2 0.03
39 3 0.04
40 25 0.32
ACGTcount: A:0.28, C:0.24, G:0.26, T:0.22
Consensus pattern (36 bp):
ATCCGGGCTAAGACCCGAAGGCATTGTGCAGTATAA
Found at i:159313549 original size:17 final size:17
Alignment explanation
Indices: 159313502--159313550 Score: 55
Period size: 17 Copynumber: 2.9 Consensus size: 17
159313492 TAGTTAAACG
**
159313502 ATGAGATATAAAAAAAA
1 ATGAGATATAAAATTAA
* *
159313519 ATG-GAAAAAAAATTAA
1 ATGAGATATAAAATTAA
159313535 ATGAGATATAAAATTA
1 ATGAGATATAAAATTA
159313551 GGAGGGGTGC
Statistics
Matches: 25, Mismatches: 6, Indels: 2
0.76 0.18 0.06
Matches are distributed among these distances:
16 12 0.48
17 13 0.52
ACGTcount: A:0.65, C:0.00, G:0.12, T:0.22
Consensus pattern (17 bp):
ATGAGATATAAAATTAA
Found at i:159314161 original size:296 final size:295
Alignment explanation
Indices: 159312980--159322379 Score: 13533
Period size: 295 Copynumber: 31.9 Consensus size: 295
159312970 NNNNNNNNNN
159312980 CTCA-GAAGGTCA-CCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * **
159313043 GGATCC-GAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGCAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
*
159313107 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATATACGACCAAAATAGCGTTTCG
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTT-AA-ATACGACC-AAATAGCGTTTCG
* *
159313172 AGTGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATA-AAAAAAATT
192 AGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAAAAATT
*
159313236 AAATGAGATATAAAATTGGA-GGGTGCAACACGAGGACTT
256 AAATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * * * *
159313275 CCCGCGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
*
159313339 GGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159313404 GGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159313469 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAAATGGAAAAAAAATTA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT--AAAAAAATAG-AAAAAAATTA
*
159313534 AATGAGATATAAAATTAGGAGGGGTGCAACACGAGGATTT
257 AATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTT
*
159313574 CTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAA-TGC-GAGTTCTGATGG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGG
* * *
159313637 GATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTCGTGCATTCTATTTATATAAA
66 GATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTT-GCGCATTCTATTTATATAAA
* * * *
159313702 GGCTACCCCTTTATCGCACTTGAGCTTCGAGTTTGAATTTAAATACGACCAAATAGCATTTCGAG
130 GGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159313767 TGATTTATTTCGTAAATAACCAATTAGTTAAATGAT-AGATATAAAAAAATGGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
*
159313831 TGAGATATAAAATA-CAGGGGTGCAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159313867 CTCACCAAGTGACCCATCTTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* ** * * *
159313932 GGATCCGGTGCATTAGTGCTGGTACGATCTTACCCGCCAATTCTTGCGCATTCTTTTTTTATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
** * **
159313997 GGCTACCCCAT-ATCGCAAATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 GGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * * *
159314061 TG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAACAATGGAAAAAAAATAA
194 TGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAA
*
159314125 ATGAGATATAAAATAGGAAGGGTGCAACACGAGGACTT
258 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159314163 CTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGATTAAACTGCAGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* *
159314228 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159314293 GGCAACCCCTAATCGCACTTGAGCATCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159314358 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
* * *
159314420 GAGATATAAAATTGGACGGGTGCAATACGAGGACTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * * * *
159314456 CCCACGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCATAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
* * *
159314520 GGATCCGGTGCATTAGTGTTGGTATGATTGCACCCGTCAATTCTTGTGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159314585 GGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159314650 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAGAAAAAAATGGAAAAAAAATTA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT--AAAAAAATAG-AAAAAAATTA
* *
159314715 AATGAGATATAAAAGAGGAGGGGTGCAACACGAGGATTT
257 AATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * *
159314754 CTCACCAAGTCACCCATGCTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGAAGTTCTGATGG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGG
* * * * *
159314819 GATCCAGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTCGTGCATTCTATTTATATAAAG
66 GATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAG
* * * * * *
159314884 GCTACCCTTTATCGCACTTGAGCTTTGAGTTTGAATTTAAATACGACCAAATAGCATTTCGAGTG
131 GCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTG
* * *
159314949 ATTTATTTCGTAAATAACCAATTAGTTAAATGATTG-GATATAAAAAAATGGAAAAAAATTAAAT
196 ATTTATTTCGTAAATAACTAATTAGTTAAACGA-TGAGATATAAAAAAATAGAAAAAAATTAAAT
* *
159315013 GAGATATAAAATA-CAGGGGTGCAACATGAGGACTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159315048 CTCACCAAGTGACCCATCTTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
** * *
159315113 GGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTTTTTTTATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
** * **
159315178 GGCTACCCCAT-ATCGCAAATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 GGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159315242 TG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAACAATGGAAAAAAA-TAA
194 TGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAA
* *
159315305 ACGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
258 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159315343 CTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTTTAATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* * *
159315408 GGATCCGGTGCATTAGTGCCGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * * *
159315473 GGCTACCCCTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCATTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159315538 GATTTGTTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
* ** *
159315601 GAGATATAAAATTGGACAGGTGGAACACGAGGACTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
159315637 CTCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * **
159315701 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGCAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* *
159315766 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATATGACCAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159315831 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAAAAATTAAA
*
159315896 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * * * *
159315933 CCCGCGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
*
159315997 GGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159316062 GGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159316127 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
*
159316192 GAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* *
159316228 CTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAATGC-GAGTTCTGATGG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGG
* * * *
159316292 GATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTCGTGCATTCTATTTATATAAAG
66 GATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAG
* * * * *
159316357 GCTACCCTTTATCGCACTTGAGCTTCGAGTTTGAATTTAAATACGACCAAATAGCATTTCGAGTG
131 GCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTG
* * * *
159316422 ATTTATTTCGTAAATAACCAATTAGTTAAATGATTAGATATAAAAAAATGGAAAAAAATTAAATG
196 ATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAATG
*
159316487 AGATATAAAATA-CAGGGGTGCAACACGAGGACTT
261 AGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159316521 CTCACCAAGTGACCCATCTTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
** * *
159316586 GGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTTTTTTTATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
** * **
159316651 GGCTACCCCAT-ATCGCAAATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 GGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159316715 TG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAACAATGGAAAAAAA-TAA
194 TGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAA
*
159316778 ATGAGATATAAAATAGGAAGGGTGCAACACGAGGACTT
258 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159316816 CTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGATTAAACTGCAGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* *
159316881 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* *
159316946 GGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159317011 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
* *
159317075 GAGATATAAAATTGGACGGGTGCAACACGAGGACTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159317111 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTCACTGCGGAGTTCTGAC
1 CTC-ACGAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * * *
159317174 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
64 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
*
159317239 AGGCTACCCCTGATCGCACTTGAGCCTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
129 AGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159317304 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
* *
159317367 TGAGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* *
159317404 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGAC
1 CTC-ACGAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * * * *
159317467 GGGATCCGGAGCATTAGTGCTGCTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
64 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
159317532 AGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
129 AGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159317597 TGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
*
159317662 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * *
159317699 C-CACGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
** *
159317762 GGATCCGGTGCATTAGTGCTGGTATGATTACACCCGTCAATTCTTGCACATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * * *
159317827 GGCTAACCTTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTT-AAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159317891 GATTTATTTCGTAAATAACTAACTAGTTAAAGGATGAGATATAAAAAAATTGAAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAG-AAAAAAATTAAA
* *
159317956 CGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159317993 CTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTTTAATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* * *
159318058 GGATCCGGTGCATTAGTGCCGGTAT-ATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * * *
159318122 GGCTACCCTTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159318187 GATTTGTTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
* ** *
159318250 GAGATATAAAATTGGACAGGTGGAACACGAGGACTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* *
159318286 CTCA-GAAGGTCACCCAACCTAGTACTACTCTCACCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * **
159318350 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGCAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
*
159318415 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159318480 GATTTATTTCGTAGATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAAAAATTAAA
* *
159318545 TGAGATATAAAATTA-GAGGGGTGAAAAACGAGGACTT
259 TGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTT
* * * * *
159318582 CCCACGAGGTGACCCATCCTAGTACTACTCTCGCCCAAGCAGGCTTAAACTGCAGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
**
159318647 GGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * * **
159318712 CGCTACCCCAT-ATCGCACATGAGCCTCGAACTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 GGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159318776 TG-TCTTATTTCGTAAATAACTAAATAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAA
194 TGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAA
159318840 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
258 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
*
159318878 CTCACCAAGTC-CCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* * **
159318942 GGATTCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
*
159319007 GGCTACCCCTGATCGTACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159319072 GATTTATTTCGTTAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
159319137 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * * *
159319173 CCCACGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
*
159319237 GGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * * **
159319302 GGCTAACCCTGATCGCACCTGAGCCTCGAATTCGAATTTAAATACGACCAAATAACGTTTAAAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159319367 GATCTATTTCGTAAATAACTAACTAGTTAAACGATGAGATATAAAAAAATTGAAAAAAATTAAAC
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
*
159319432 GAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * *
159319468 CTCACCAAGTCACCTATCCTAGTACTACTCTCGCTCAAGCACGCTTAAACTGCGGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* * *
159319533 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTTCGCA-TCTATTTTTGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159319597 GGCTACCCCTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159319662 TATTTGTTTCGTAAATAACTAATTAGTTAAATGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
* *
159319725 GAGATATAAAATTGGACGGGTG-AACACGAGGACTT
260 GAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* *
159319760 CCCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCAGAGTTCTGATG
1 CTCACGAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * * *
159319824 GGATCCGGAGCATTAGTGCTGGTATGATCGTACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * *
159319889 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACAAAATAGCATTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159319954 AATTTATTTCGTAAATTAGTAATTAGTTAAACGATGACATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAAAAATTAAA
* *
159320019 TGAGATATAAAATTGGAGGGGTGTAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * * * *
159320056 CCCGCGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
*
159320120 GGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159320185 GGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159320250 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAG-AAAAAAATTAAA
* * *
159320315 TGAGATATAATATA-CAGGGGTGCAACACGAGAACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * * *
159320351 CTCACCAAGTGACCCATCCTAGTACTACTCTCGCCCAAGCAGGCTTAATCAGCAGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAA-CTGCGGAGTTCTGATG
* **
159320416 GGATCCAGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * * **
159320481 CGCTA-CCCTATATCGCACATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 GGCTACCCCT-GATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159320545 TG-TCTTATTTCGTAAATAACTAAATAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAA
194 TGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAA
159320609 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
258 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* *
159320647 CTCACCAAGTCACCCATCCAAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
* * ** * **
159320712 GGATTCGGTGCATTAGTGCTGGTATGATCGTACCATTCAATTCTTGCGCATTCTATTTTTGCAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
159320777 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159320842 GATTTATTTCGTTAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAAAAATTAAA
*
159320907 TGAGTTATAAAATTA-GAGGGGTGCAACACGAGGACTT
259 TGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTT
* * * * * *
159320944 CCCGCGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
* * *
159321008 GGATCCGGTGCATTACTGCTGGTATGATTGCACCCGTCAACTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159321073 GGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159321138 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAATGGAAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAG-AAAAAAATTAAA
* * *
159321202 TGAGATATAATATA-CAGGGGTGCAACACGAGAACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * *
159321238 CTCACCAAGTGACCCATCCTAGTACTACTCTCGCCCAAGCAGGCTTAAACTGCAGAGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATG
** * * *
159321303 GGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGAGCATTCTATTTTTGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * *
159321368 GGCTACCCCTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGA-CAGAATAGCGTTTCGAG
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCA-AATAGCGTTTCGAG
*
159321432 TGATTTGTTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
* * *
159321495 TGAGATATAAAATTGGACGGGTGGAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
*
159321532 CCCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * * * * *
159321596 GGATCCAGAGCATTAGTGCTGGTATGATCACACCCATCAATTCTTGCACTTTGTATTTATGTAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * *
159321661 GGCTACCGCTGATCGCACTTGAGCCTCTAATTTGAATTTTAATACGACCAAACAGCGTTTCGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159321726 AATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAAAAATTAAA
*
159321791 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
* * * * * * *
159321828 CCCGCGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCGCGCTTAACTGC-AAGGTTCTGATG
1 CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATG
*
159321892 GGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
65 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAA
* * * * *
159321957 GGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATTCGACCAAATAACGTTTAGAGT
130 GGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159322022 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAA-TTAAA
* *
159322087 TGAGATATAATATA-CAGGGGTGCAACACGAGGACTT
259 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
*
159322123 CTCA-GCAAGTGACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACG-AAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* **
159322187 GGGATACGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAA
64 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
* * * **
159322252 AGGCTACCCCAT-ATTGCACATGAGCCTCGAATTTGAATTGAAATACGACCAAATATTGTTTCGA
129 AGGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
*
159322316 GTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTA
159322380 TGTAATATCT
Statistics
Matches: 8196, Mismatches: 791, Indels: 236
0.89 0.09 0.03
Matches are distributed among these distances:
291 65 0.01
292 367 0.04
293 1185 0.14
294 1082 0.13
295 2379 0.29
296 2229 0.27
297 451 0.06
298 292 0.04
299 146 0.02
ACGTcount: A:0.33, C:0.19, G:0.19, T:0.28
Consensus pattern (295 bp):
CTCACGAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGG
GATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAG
GCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTG
ATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAATG
AGATATAAAATAGGAGGGGTGCAACACGAGGACTT
Found at i:159315821 original size:293 final size:293
Alignment explanation
Indices: 159312980--159348817 Score: 37637
Period size: 296 Copynumber: 121.0 Consensus size: 293
159312970 NNNNNNNNNN
159312980 CTCA-GAAGGTCA-CCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * *
159313043 GGATCC-GAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGCAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
159313107 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATATACGACCAAAATAGCGTTTCG
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTT-AA-ATACGACC-AAATAGCGTTTCG
* *
159313172 AGTGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATA-AAAAAAATT
192 AGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATT
159313236 AAATGAGATATAAAATTGGA-GGGTGCAACACGAGGACTT
254 AAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159313275 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159313338 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159313403 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159313468 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAAATGGAAAAAAAATT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT--AAAAAAATAG-AAAAAAATT
*
159313533 AAATGAGATATAAAATTAGGAGGGGTGCAACACGAGGATTT
254 AAATGAGATATAAAATT-GGAGGGGTGCAACACGAGGACTT
*
159313574 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAA-TGC-GAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159313636 GGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTCGTGCATTCTATTTATATAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTT-GCGCATTCTATTTATGTAA
* * * *
159313701 AGGCTACCCCTTTATCGCACTTGAGCTTCGAGTTTGAATTTAAATACGACCAAATAGCATTTCGA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* * * *
159313766 GTGATTTATTTCGTAAATAACCAATTAGTTAAATGATAGATATAAAAAAATGGAAAAAAATTAAA
193 GTGATTTATTTCGTAAATAACTAATTAGTTAAACGAT-GAGATAAAAAAATAGAAAAAAATTAAA
**
159313831 TGAGATATAAAA-TACAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159313867 CTCACCAA-GTGACCCATCTTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* ** * * * *
159313931 GGGATCCGGTGCATTAGTGCTGGTACGATCTTACCCGCCAATTCTTGCGCATTCTTTTTTTATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
** * **
159313996 AGGCTACCCCAT-ATCGCAAATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* * *
159314060 GTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAACAATGGAAAAAAAATA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAA-AATAGAAAAAAATTA
* *
159314124 AATGAGATATAAAATAGGAAGGGTGCAACACGAGGACTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159314163 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGATTAAACTGCAGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
*
159314227 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159314292 AGGCAACCCCTAATCGCACTTGAGCATCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159314357 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
* *
159314421 AGATATAAAATTGGACGGGTGCAATACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159314456 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCATAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* * * *
159314519 GGGATCCGGTGCATTAGTGTTGGTATGATTGCACCCGTCAATTCTTGTGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159314584 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159314649 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAGAAAAAAATGGAAAAAAAATT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT--AAAAAAATAG-AAAAAAATT
** *
159314714 AAATGAGATATAAAAGAGGAGGGGTGCAACACGAGGATTT
254 AAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159314754 CTCACCAA-GTCACCCATGCTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGAAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * * *
159314818 GGATCCAGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTCGTGCATTCTATTTATATAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* * * * *
159314883 GGCTACCCTTTATCGCACTTGAGCTTTGAGTTTGAATTTAAATACGACCAAATAGCATTTCGAGT
131 GGCTACCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159314948 GATTTATTTCGTAAATAACCAATTAGTTAAATGATTGGATATAAAAAAATGGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGA-T-GAGATAAAAAAATAGAAAAAAATTAAAT
** *
159315013 GAGATATAAAA-TACAGGGGTGCAACATGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159315048 CTCACCAA-GTGACCCATCTTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** * * *
159315112 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTTTTTTTATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
** * **
159315177 AGGCTACCCCAT-ATCGCAAATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* *
159315241 GTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAACAATGGAAAAAAA-TA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAA-AATAGAAAAAAATTA
* * *
159315304 AACGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159315343 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTTTAAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159315407 GGGATCCGGTGCATTAGTGCCGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * * *
159315472 AGGCTACCCCTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCATTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159315537 TGATTTGTTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
** *
159315602 AGATATAAAATTGGACAGGTGGAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
159315637 CTCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * *
159315701 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGCAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
*
159315766 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATATGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159315831 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
159315896 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159315933 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159315996 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159316061 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159316126 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
* *
159316191 TGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159316228 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAATGC-GAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * *
159316291 GGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTCGTGCATTCTATTTATATAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* * * *
159316356 GGCTACCCTTTATCGCACTTGAGCTTCGAGTTTGAATTTAAATACGACCAAATAGCATTTCGAGT
131 GGCTACCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159316421 GATTTATTTCGTAAATAACCAATTAGTTAAATGATTAGATATAAAAAAATGGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGA-T-GAGATAAAAAAATAGAAAAAAATTAAAT
**
159316486 GAGATATAAAA-TACAGGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159316521 CTCACCAA-GTGACCCATCTTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** * * *
159316585 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTTTTTTTATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
** * **
159316650 AGGCTACCCCAT-ATCGCAAATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* *
159316714 GTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAACAATGGAAAAAAA-TA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAA-AATAGAAAAAAATTA
* *
159316777 AATGAGATATAAAATAGGAAGGGTGCAACACGAGGACTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159316816 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGATTAAACTGCAGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
*
159316880 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159316945 AGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159317010 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAAATAGAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAAATAGAAAAAAATTAAAT
*
159317075 GAGATATAAAATTGGACGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159317111 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTCACTGCGGAGTTCTGAC
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * *
159317174 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
*
159317239 AGGCTACCCCTGATCGCACTTGAGCCTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159317304 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159317369 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159317404 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGAC
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * * *
159317467 GGGATCCGGAGCATTAGTGCTGCTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
159317532 AGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159317597 TGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
159317662 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159317699 C-CACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
** * *
159317761 GGGATCCGGTGCATTAGTGCTGGTATGATTACACCCGTCAATTCTTGCACATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159317826 AGGCTAACCTTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTT-AAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159317890 TGATTTATTTCGTAAATAACTAACTAGTTAAAGGATGAGATATAAAAAAATTGAAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAAAAAATTAA
* * *
159317955 ACGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159317993 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTTTAAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159318057 GGGATCCGGTGCATTAGTGCCGGTAT-ATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159318121 AGGCTACCCTTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAG
130 AGGCTACCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159318186 TGATTTGTTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
** *
159318251 AGATATAAAATTGGACAGGTGGAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159318286 CTCA-GAAGGTCACCCAACCTAGTACTACTCTCACCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * *
159318350 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGCAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
159318415 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159318480 GATTTATTTCGTAGATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
* * *
159318545 TGAGATATAAAATTAGAGGGGTGAAAAACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159318582 CCCACG-AGGTGACCCATCCTAGTACTACTCTCGCCCAAGCAGGCTTAAACTGCAGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** *
159318646 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * * **
159318711 ACGCTACCCCAT-ATCGCACATGAGCCTCGAACTTGAATTGAAATACGACCAAATAATGTTTCGA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* *
159318775 GTG-TCTTATTTCGTAAATAACTAAATAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTA
*
159318839 AATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159318878 CTCACCAA-GTC-CCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159318941 GGGATTCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
*
159319006 AGGCTACCCCTGATCGTACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159319071 TGATTTATTTCGTTAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
*
159319136 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159319173 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159319236 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * **
159319301 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTCGAATTTAAATACGACCAAATAACGTTTAAAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159319366 TGATCTATTTCGTAAATAACTAACTAGTTAAACGATGAGATATAAAAAAATTGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
* * *
159319431 CGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159319468 CTCACCAA-GTCACCTATCCTAGTACTACTCTCGCTCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159319532 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTTCGCA-TCTATTTTTGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159319596 AGGCTACCCCTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159319661 TTATTTGTTTCGTAAATAACTAATTAGTTAAATGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159319726 AGATATAAAATTGGACGGGTG-AACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159319760 CCCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCAGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * *
159319824 GGATCCGGAGCATTAGTGCTGGTATGATCGTACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159319889 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACAAAATAGCATTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159319954 AATTTATTTCGTAAATTAGTAATTAGTTAAACGATGACATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATG--AGAT-AAAAAAATAGAAAAAAATTAAA
*
159320019 TGAGATATAAAATTGGAGGGGTGTAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159320056 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159320119 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159320184 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159320249 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAAAAAATTAA
* ** *
159320314 ATGAGATATAATA-TACAGGGGTGCAACACGAGAACTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159320351 CTCACCAA-GTGACCCATCCTAGTACTACTCTCGCCCAAGCAGGCTTAATCAGCAGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAA-CTGCGGAGTTCTGAT
* ** *
159320415 GGGATCCAGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * * **
159320480 ACGCTACCCTATATCGCACATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 AGGCTACCCT-GATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159320545 TG-TCTTATTTCGTAAATAACTAAATAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAA
194 TGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAA
*
159320609 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159320647 CTCACCAA-GTCACCCATCCAAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * ** * *
159320711 GGGATTCGGTGCATTAGTGCTGGTATGATCGTACCATTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
159320776 AGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159320841 TGATTTATTTCGTTAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAA
* *
159320906 ATGAGTTATAAAATTAGAGGGGTGCAACACGAGGACTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159320944 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* * * *
159321007 GGGATCCGGTGCATTACTGCTGGTATGATTGCACCCGTCAACTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159321072 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159321137 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAATGGAAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAG-AAAAAAATTAAA
* ** *
159321202 TGAGATATAATA-TACAGGGGTGCAACACGAGAACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159321238 CTCACCAA-GTGACCCATCCTAGTACTACTCTCGCCCAAGCAGGCTTAAACTGCAGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** * *
159321302 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGAGCATTCTATTTTTGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159321367 AGGCTACCCCTGAACGCACTTGAGCGTCGAATTTCAATTTAAATACGA-CAGAATAGCGTTTCGA
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCA-AATAGCGTTTCGA
*
159321431 GTGATTTGTTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAAT
193 GTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAAT
* *
159321496 GAGATATAAAATTGGACGGGTGGAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159321532 CCCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * * * *
159321596 GGATCCAGAGCATTAGTGCTGGTATGATCACACCCATCAATTCTTGCACTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* * *
159321661 GGCTACCGCTGATCGCACTTGAGCCTCTAATTTGAATTTTAATACGACCAAACAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159321726 AATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
159321791 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * * *
159321828 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCGCGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159321891 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159321956 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATTCGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159322021 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAA-TTAA
* **
159322086 ATGAGATATAATA-TACAGGGGTGCAACACGAGGACTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159322123 CTCA-GCAA-GTGACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGA
1 CTCACG-AAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGA
* ** *
159322186 TGGGATACGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATA
64 TGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTA
* * * **
159322251 AAGGCTACCCCAT-ATTGCACATGAGCCTCGAATTTGAATTGAAATACGACCAAATATTGTTTCG
129 AAGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCG
*
159322315 AGTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATT
192 AGTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATT
** * * * ** * ** **
159322379 ATGTAATATCTCGAATT--A-GGG-CCTAATCGAAATAGTGGTTT
254 AAATGAGATATAAAATTGGAGGGGTGC-AA-C--ACGAG-GACTT
* * ** * ** * * * ***** *** *
159322420 CGTGACCATAAAT--CCGA-GATAGAAATAAT-TATTTTATA--A---TT-A-TTTTGAGGTTAA
1 C-TCACGA-AGGTCACCCATCCTAGTACTACTCTCGCCCA-AGCACGCTTAACTGCGGA-GTT-C
** * * ** * * * * *
159322474 TGATATGAT-TGCATG-ATT-GTG-TGAAAAT-TTCGTGA--TG-AAATTCTATGC-CTAAAGTG
61 TGATGGGATCCG-GTGCATTAGTGCTG-GTATGATCG-CACCCGTCAATTCT-TGCGC---A-TT
** ** * * * ** * * *
159322530 CT-TAAAT-TGAAA-G-TAGGGACTAAATCGAATAAGTTGCAAAACTTGCATTCTAGAAGTTT-T
118 CTATTTATGT-AAAGGCTA--CCCT-GATCG---CACTTG--AGCCTCGAATT-T-GAA-TTTAA
* ** * * * * * * * *
159322590 TTA-GTATGAAATTG-TTTTGGAAT-ATTAATGAGTAGGTCTTAAATAGC-AATTTGACCAATTT
171 ATACG-ACCAAATAGCGTTTCGAGTGATT--T-A-T--TTCGTAAATAACTAA-TT-----AGTT
* * * *** *
159322651 TAA-GTTCATG-GACAAAATTAGGACATGGAAGGAATTTTTGGAAAGTTTAG-TAGTAAGGGTAT
223 AAACG---ATGAGATAAAA--A--A-ATAGAA--AAAAATT--AAA--TGAGATA-TAA----A-
* *** * ** ** * *
159322713 TTTGGTCATTTAGT-TATTAAAATGAATT
268 ATTGG--A-GGGGTGCAACACGAGGACTT
*** * ** * * ** * * ** * * *
159322741 AAAAACAAAATTAAAAGCCAATTTTTGT-CCA-TCTTC-TTCATTAGGC-CG--AAATTTCAAGG
1 -CTCACGAAGGT--CA-CCCATCCTAGTACTACTC-TCGCCCA--A-GCACGCTTAACTGC--GG
* * ** * * * *
159322800 -GTTCTCCATAGCTAGGGTTTGTTTCAAGCTTCCAAGCTCCATAGTAAGTGATTC-CAAGCCCCG
56 AGTTCT-GAT-G---GGATCCGGTGC-A--TT---AG-TGC-TGGT-A-TGA-TCGC-A--CCCG
** ** **** * *** * ** * *
159322863 T-TTTTAATGATTTTTACGTTTTTGA-GATCCCGG-TA-ACTCGAT-AAAGCTT-ATG-TTAGAC
102 TCAATTCTTGCGCATT-C-TATTT-ATG-TAAAGGCTACCCT-GATCGCA-CTTGA-GCCTCG--
* * ** * *** * * * *** ** * *
159322921 AACTTGTACTACTCGATTTTAAGCAAA-AACGAGTAAAAG-GGCTTA-ATCGGTAAAAATACCTA
158 AATTTG-A--ATTTAAATACGACCAAATAGCG-TTTCGAGTGATTTATTTC-GT--AAATAACTA
* * *** ** * ** * ** * ***
159322983 A-TAG-T-CAC-A--AG-T-ACATGTTAGAGTGAGAATTTGATGTTGCCATAGAA--GAGAAAAG
216 ATTAGTTAAACGATGAGATAAAAAAATAGA-AAAAAATTAAATG-AGATATAAAATTG-GAGGGG
* *
159323038 TG-ATCA-GCATG--TT
278 TGCAACACG-AGGACTT
* * * * * *** ** * * * * * *** *
159323051 GTAAAACATAAGAATAAGGAAT-AAAGT-TTAATCCCGAGCCTAGGGGCAAAAATGTAAATATGC
1 CT--CAC-GAAG-GTCACCCATCCTAGTACTACTCTC--GCCCA--AGC-ACGCT-T-AA-CTGC
** * **** * * *** * ** * *
159323114 AAAAGTT-T-A-GGGGTAAAATTGTAATT-TTGCCAAAATTTGAGT-G-A-AGGATTAATTTGAT
54 -GGAGTTCTGATGGGAT-CCGGTG-CATTAGTG-C-TGGTATGA-TCGCACCCG-TCAA-TT-CT
* ** * * *** * * ** **
159323172 AATGTG-AGTAT-TAAATAAGCTAAATGTGTTATTTTAGATCAAGAAAGACGTG-GAATCG-ACC
110 --TGCGCA-T-TCTATTTATG-TAAA-G-GCTACCCT-GATC--G---CACTTGAGCCTCGAATT
* ** * * * * * * ** * * *
159323233 TCAATCGAGGAA-AAGA-AAAGATTGTGGACTAAATTGCAAAATCTTTGTATTTTGGTACCA-AG
162 TGAATTTA--AATACGACCAA-ATAG-CG--T---TT-C-GAGTGATT-TA-TTTCGTA-AATAA
* ** * * **** * *
159323295 GTAAGTTCATGTGTAAATAATGTAGCATAATGGTTATTTTTAAGTTATTGATGTTAATTATATGT
213 CTAA-TT-A-GT-TAAACGATG-AG-ATAA-----A-----AA--AATAGAAAAAAATTAAATGA
* * * ** *** * *
159323360 TATGCT-GAATTTTA-TTATG-AA-ATGTATG-CTT
260 GAT-ATAAAATTGGAGGGGTGCAACACG-AGGACTT
*** ** * ** * * * ** * *
159323391 -TGTGGTTAATTTCA--AATAATATGTA-AATTAT-G-TGAA-CTACTTGTTAAATATAATTGTT
1 CTCACG--AAGGTCACCCATCCTA-GTACTACTCTCGCCCAAGC-AC--G----CT-TAACTG--
* * * * * * * **
159323449 ACCGAGTAT-TGATTTCGGCATTCTACGGAAGACGGCAAGGATAAGTGTTCGAGGA-AAAAGC-C
53 -CGGAGT-TCTGA--T-GGGA-TC--C-G--G--TGC----ATTAGTGCT-G-GTATGATCGCAC
** * * * ** * * *
159323511 CATTTGAA-CCTTAG-G-AATAGA-TTAGGATACAAGTGACATGTCACTAGGAT-G---TTGAGC
99 C-CGTCAATTCTT-GCGCATTCTATTTATG-TA-AAG-G-C-T-ACCCT--GATCGCACTTGAGC
* * * * * ** * * * ** ** *
159323568 ATCCGAACTCGTTGAA-TTGAGTCCGAGTTCACTTATG-GATGCGAATG-TCCGAACTCGTTGAG
154 CT-CGAA-T--TTGAATTTAAATACGA--CCAAATA-GCGTTTCGAGTGAT-TTATTTCG-T-AA
* * * *** *** * **** **
159323630 TTGAGT-CCGAGTT---CG-TGAGATGTAACTAGGCATCCG-AACTCGTTGAGTTGAG-TCCGAG
209 ATAACTAATTAGTTAAACGATGAGA--TAA--AAAAAT-AGAAAAAAATT-AAATGAGAT---A-
** * * * * ** *
159323688 TTCACTT--ATGGATGCGAACGCCCGAGCTCGT
264 TAAAATTGGAGGGGTGC-AA--CACGAGGACTT
* ** * *** ** ** ** * * *
159323719 -TGA-GTTGAGT--CCGAGTTCGCT--TA-TGGGCGGGTTACATGATTGCTTGATTGAATATGTG
1 CTCACGAAG-GTCACCCA--TC-CTAGTACTACTCTCG-CCCA--A--GCACGCTT-AA-CTGCG
* * ** * * * * * * * * ** *
159323777 GCACTTATGTACAAT-TTATCCGTGTATCCAAATTATATTCCGATGTGTTC-AACGGGTAAAGTT
55 G-AGTTCTG----ATGGGATCCG-G--TGC--ATTA-GTGCTGGTATGATCGCACCCGTCAA-TT
* *** * * * * **
159323840 CTACT-CAAATGGAGGAATATTCGAGATGTAAAGAG--A-CGT-ATTGGTAAGTGATG--T-GAA
108 CT--TGC----GCA-TTCTATT---TATGTAAAG-GCTACCCTGA-TCGCACTTGA-GCCTCGAA
* * ** * * ** ** * ** * * ** *
159323897 ATGGATATTTTGGACAGGTATGTATTTAAC-CCTCGGGTTGA-GTA-TT-GATACAACCAC-GAT
160 TTTGA-A-TTTAAATACG-A-CCAAATAGCGTTTCGAG-TGATTTATTTCG-TA-AATAACTAAT
* * * * * * * * * *
159323957 AAGGTAATAAGAT--GAT-GAAAAAT-GATTAAAAATGTGATATGTGTTTTAGTGATACA-TGCT
218 TAGTTAA-ACGATGAGATAAAAAAATAGA-AAAAAAT-T-AAATGAG--ATA-T-A-AAATTG-G
** * *** *
159324017 AAAGTTG--ATTGGTATGACTGT
273 AGGGGTGCAACACG-AGGACT-T
**** * ** * * ** ** * * * * *
159324038 -TTGTTAA-GTTACTTATTATTTGCATATGAACTTACT-AAGCATTTATGCTTACTCCCT-CCTT
1 CTCACGAAGGTCAC---CCA--T-CCTA-GTAC-TACTCTCGC--CCAAGC--AC-GCTTAACTG
** * ** * * * * * *
159324099 CTTA-TTCATTGTAGTTTTGGA-CAAG-CCAGCTCAGGTG-TCGGGATAGGTCGAAGGCTCAGTC
53 CGGAGTTC--TG-A---TGGGATCCGGTGCA--TTA-GTGCT-GGTAT-GATCGCA--C-CCGTC
* * ** * *** * *
159324160 ACA--CTATCCGGAAGACT-TTT-GGTAAATGGCTTGTAAATTTAAGTATGGCA-TGTATAGCAA
104 A-ATTCT-TGC-GCATTCTATTTATGTAAA-GGC---T-ACCCT--G-ATCGCACT-T-GAGC--
* * * * * ** *
159324220 TATACCTATTTTG--TGTAAAT--GATCTTATGGTATG-GTTGTGGAATGGTTGAGGAAATGCTT
154 -CT--CGAATTTGAATTTAAATACGA-C-CA-AATA-GCGTT-TCG-A--G-T---G--AT--TT
* * * * * * ** ** *
159324280 GATAAT-GATAAATTATTAAAATGGTTAGTGTATATTATGCTTGATGTTAAGGAAAGCTATTAAG
200 -AT-TTCG-TAAATAACT--AA---TTAGT-TA-A--ACG-ATGA-GATAA--AAAAATAGAAAA
* * * * ** * * *
159324344 ATATTTAGTG-CATA-AAAACTCATAAAAGGGATGAAATTTGCCATAAAC-A-GAATA
249 AAATTAAATGAGATATAAAA-T--T-GGAGGG--G-----TG-CA-ACACGAGGACTT
** * ** * ** * ** * * * * * *
159324398 CTGCA-GCAA---CACTGA-CGCGAGTTTAAAAAT-T-TACTAAAAATC-ATAGAAAT-TGAACT
1 CT-CACG-AAGGTCACCCATC-CTAG--TACTACTCTCGCCCAAGCA-CGCT-TAACTGCGGAGT
* * * ** ** * ** * * * * * * ***
159324454 TGGTGAT-GGACTAC-ATATAAAATTGAAGCT-T-AT--TA--TGTCTAGT-TT-CACATGAAAT
59 T-CTGATGGGA-TCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTAT
** *** *** * * *
159324509 AAATG-AAGCAGG-TA-AGGGAATTATA-TGTTA-CAAT--ATATTTGAATTTTAGTAAAACAGG
122 TTATGTAA--AGGCTACCCTG-ATCGCACT-TGAGC-CTCGA-ATTTGAA-TTTA--AATAC--G
** * ** * *
159324567 GTC--ATAGCAGTTTCTGAATCCCCTGTTCCAACTTT-ATAAATTCACCATAAATT-G-TAAA-G
176 ACCAAATAGC-GTTTC-GAGT--GAT-TT---A-TTTCGTAAA-T-AAC-T-AATTAGTTAAACG
** ** *** ** * * ** ** *** *
159324626 AT---ATAATTAGGTAG-TGTATTTTATATTCTCAGA-ATACTTATT-GA-GTCTAGTTTCAGGA
228 ATGAGATAAAAAAATAGAAAAAAATTA-A--ATGAGATATA-AAATTGGAGGGGT-GCAACACGA
* * *
159324684 GAAATAAA
288 GGACT--T
* ***** ** ** * * *** * * * *
159324692 CTTCATAGTCATATGGATTTTTTA-CAGAG-AGAAATGTGGTTCGTAGTAAACAGAGGTCAGACC
1 C-TCA-CG--A-A-GG-TCACCCATCCTAGTA-CTA-CT--CTCG-CCCAAGCA-CGCTTA-A-C
* * * * **** ** * * * * * * ***
159324755 AGTC-AAGTCCTGAAATAGGGGTAAATTTAACTAATAAACT-GTACTAATTGGCCCAACCAAAAA
51 TG-CGGAGTTCTG--AT-GGGATCCGGTGCATTAGT--GCTGGTA-TGA-T--CGCACCCGTCAA
* ** * ** * *** * ** * * * ** *
159324818 TTCTAGAAAAACATT-AATAGATAGATATATGAGTCTAGATTCAGGGAAAATTTACGGATCTTAA
106 TTCTTG---CGCATTCTATTTAT-G-TA-A--AGGCTACCCTGATCG-CACTTGA-GCCTC-GAA
* ** * ** ** * * *
159324882 TTTCGAGTTT-CGTA--ACTCGAGATATGATTTTTCTTGTGACTTTGA--T-GCAAGTAGCTTAA
160 TTT-GAATTTAAATACGAC-C-AAATA-G-CGTTTCGAGTGA-TTT-ATTTCGTAAATAAC-TAA
* * * * *
159324941 -AAGCTGTGAATG-T-AGA-AACAAATAATCCA-AAGTTCTAAAAATGTTAAACTAAGCTTAGTA
217 TTAG-T-TAAACGATGAGATAA-AAA-AAT--AGAA-----AAAAA--TTAAA-TGAG-ATA-TA
** * *** * * * *
159325001 ACACCT-CA-TACT-CGACTCCAGCGACGGT
266 A-AATTGGAGGGGTGCAACACGAG-GAC-TT
* ** * ** ** *** * * * *** *
159325029 CTCGGGCGTGGGGGCGTTACAAATTAAATGAGATA-TAAAATAG--GAGGGGTGC--AAC-ACGA
1 CTC--AC---GAAG-GTCACCCA-T-CCT-AG-TACTACTCTCGCCCAAGCACGCTTAACTGCG-
* * *** * * ** * ** ** * *
159325088 CGACTTCTCA-CCAAGTCAC---CCATCCTAGTACTACTCTCGCCCAAGCATGC-TTAA-AC-TG
55 -GAGTTCTGATGGGA-TC-CGGTGCAT--TAGTGCTGGTAT-GATC--GCACCCGTCAATTCTTG
* ** * **** * ** ** *
159325146 CGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCACACCCGTCAAATCTTGCACATT
112 CGCA-TTCT-AT-TTAT---GT--A-AAG-GCTACCCTGATCGCA--C-TTGAGCCTCG-A-ATT
* ** * ** *
159325211 CT-ATTTTTGCAAAGGCTAC-ACCGGATGGCAATT-GAGCGTCGAATTTCAATT--TAAATATGA
162 -TGA-ATTT--AAA---TACGACCAAATAGCGTTTCGA--GT-G-ATTT-ATTTCGTAAATA--A
* * * * **** ** * *
159325271 CAAAATAGCGTT--TCGAGTGATTTATTTCGTAAATA-ACTAATTAGTTAAACGATGAGATAAAA
213 CTAATTA--GTTAAACGA-TGA--GA-TAAAAAAATAGA--AAAAAATT-AA--ATGAGAT-ATA
* * **** * *
159325333 AAATAGAAAAAAAT-TAA-ATGA-GA-TAT
266 AAATTG-GAGGGGTGCAACACGAGGACT-T
*** * * * * * ** * * * * * * *
159325359 AAAATTGGACGGGTGCA-ACA--CGAGGACT--TC-C-CAGAAGGTCACCCAT-CCT-AGTACTA
1 CTCA--CGA-AGGT-CACCCATCCTAGTACTACTCTCGCCCAA-G-CACGCTTAACTGCGGAGTT
* * * * * * * * * * * *
159325415 CT-CT-CG-CCCAAGCATGC-TTAACTGCGGAGTTCTGATGGGATCCG-GAGCA-T-TAGCG---
60 CTGATGGGATCC--G-GTGCATT-AGTGCTG-G-TATGATCGCACCCGTCA--ATTCTTGCGCAT
** ** ** * * * * * ** *
159325470 -CT-GGTATG--ATCGC-ACCC--ATCAGTTCTTGCGCTTTGTATTT--ATGTAAAGGCTACCGC
117 TCTATTTATGTAAAGGCTACCCTGATC-GCACTTGAGCCTCGAATTTGAATTTAAATACGA-C-C
** ** * * * *
159325526 TGATCA-CACTT-GAGCCTCGAATTTGAATT--TAAATACGACCAAATAGCATT--TCGAGTGAT
179 AAAT-AGCGTTTCGAG--T-G-ATTT-ATTTCGTAAATA--ACTAATTAG--TTAAACGA-TGA-
* *** * * ** * * * **** * *
159325585 TTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAAT-TAA-ATG
232 -GA--TAAAAAAATAGAAAAAAATT-AA--ATGAGATAT---AAAATTG-GAGGGGTGCAACACG
159325648 A-GA-TAT
287 AGGACT-T
* * * * * ** * * * * ** **
159325654 AAAATTA-GAGGGGTGA--AAAACGAGGACT--TC-C-CACGAGGTCAC-C--AA-T-CCTAGAA
1 ---CTCACGA-AGGTCACCCATCCTAGTACTACTCTCGC-CCAAG-CACGCTTAACTGCGGAGTT
** * ** * * * * * * * * *
159325707 CT-ACTCTCG-CCCAAGCACGCATAACTGCAAGGTTCTGATGGGATCCGGTGC-A-T-TAGTGC-
60 CTGA-T-GGGATCC--G-GTGCATTAGTGC-TGG-TATGATCGCA-CCCGT-CAATTCTTGCGCA
** * * * * * *
159325766 TGGTA-TGAT-T----GC-ACCC-G-TC-AATTCTTGCGCATTC-TATTT--ATATAAAGGCTAA
116 TTCTATTTATGTAAAGGCTACCCTGATCGCA--CTTGAGC-CTCGAATTTGAATTTAAA---T-A
** * * * * * * *
159325818 CCCTGATCGCACCTGAGC--CTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATT
174 --C-GA-C-CAAAT-AGCGTTTCG-A-GTG-ATTT-ATTTCG--TAAATAAC---TA-A-TTAGT
** * ** * * ** * *
159325881 TATTTCG-T-AAATAACTAATTAGTTAAACGATGAGATATAGAAAAAAATGGAAAAAAATTAAAT
222 TA-AACGATGAGATAAAAAAATAG--AAA--A--AAAT-TA-AATGAGAT---ATAAAA-T---T
**** * *
159325944 GAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
271 G-G--A-GGGGT-GCA--------ACACGAGGACTT
* * * *
159325980 CTTACCAA-GTCACCCATCCTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGGAGTTCTCATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * ** * * *
159326044 GGATCCGGTGCATTAGTGATGTTATGATCGTACTTGTCAACTCTT-CTACATTCTATTTATATAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAA
* * * *
159326108 AGGCTACCCCTTACCGCACTTGAGCTTCAAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * * * *
159326173 TGATTTATTTCGTAAATAACCAATTAGTAAAACGATTAGATATAAAAAAAATGGAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATA-GAAAAAAATTAAA
**
159326238 TGAGATATAAAA-TACAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * **
159326274 CTCACCAA-GTGACCCATCCTAGCGCTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** *
159326338 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * **
159326403 AGGCTACCCCAT-ATCGCACATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* * *
159326467 GTG-TCTTATTTCGTAAATAAATAATTAGTTAAATGATGAGATATAAAAAAATGGAAAAAAATTA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTA
*
159326531 AATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159326570 CTCACCAA-GTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAAACTGCGGAGTTCTAAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159326634 GGGATCCAGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159326699 AGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159326764 TGATTTATTTCGTAAATAACTAATTAGTTAAATGATGAGATAAAAAAAATAGAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAAATAGAAAAAAATTAAAT
*
159326829 GAGATATAAAATTGGACGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159326865 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * *
159326928 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159326993 AGGCTACAGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAG
130 AGGCTAC-CCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * * *
159327058 TGATTTATTTCGTAAATTAGTAATTAGTTAAGCGATGAGAGATAAAAAAATAGAAAAAAATCAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGAT--GAGATAAAAAAATAGAAAAAAATTAAA
*
159327123 TCAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159327160 CCCACG-AGGTCACCAATCCTAGAACGACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
** *
159327223 GGGATCCGGTGCATTAGTGCTGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159327288 AGGCTAACCCTGATCGCACCTGAGCCTCTAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159327353 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAATGGAAAAAAAATTA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAG-AAAAAAATTA
** *
159327418 AATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159327457 CTCACTAA-GTCACCCATCCTAGTACTACTCTGGCCCAAGCATGCTTAAACTGTGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159327521 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCACATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * * *
159327586 AGGCTACCCCTGATCGCACTTGAGCGTCAAATTTCAATTTAAATACGACAAAATAGCGTTTCAAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159327651 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
**
159327716 AGATATAAAATTGGCCGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* ** * *
159327751 CCCA-GAAGGTCACCCATCCTAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTTTTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * *
159327815 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCACTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159327880 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTTAATTTAAATAC-ACCAAATAGCATTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159327944 GATTTATTTCATAAATTAGTAATTAGTTAAACAATGAGATATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
159328009 GAGATATAAAATTGGAGGGGTG-AACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * **
159328044 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTG-TAAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* * *
159328107 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGTGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159328172 AGGCAACCCTGATCGCACCTGAG-CTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159328236 GATTT-TTTTGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAAAAAATTAAA
* *
159328300 TGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159328337 CTCACCAA-GTCACCCATCCTAGTACTAATCTCGTCCAAGCACGCTTAAATGC-GAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159328400 GGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGTGCATTCTATTTATATAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
*
159328465 GGCTACCCCTTATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159328530 GATTTATTTTGTAAATAACCAATTAGTTAAACGATTAGATATAAAAAAATGGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGA-T-GAGATAAAAAAATAGAAAAAAATTAAAT
*
159328595 GAGATATAAAA-TAGAGGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159328630 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGGCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * * *
159328694 GGGATCCGGTACATTAGTGCTGGTATGATCGCACCCGTTAATTCCTGCGCATTCTATTCT-TCTA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATT-TATGTA
* * * *
159328758 AAGGCTATCCCTGATCGTACTTGAGCGTCGAATTTCAATTTAAAAACGACCAAATAGCGTTTCGA
129 AAGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
*
159328823 GTGATTTATTTCGTGAATAACTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTA
193 GTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTA
* *
159328888 AATGAGATATAAAATTGGAGGGGTGCAATAAGAGGACTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * ** * *
159328927 CCCA-GGAGGTCACCCATCCTAGCACTACTCTATCCCAAGCACGCGTAACTGCAGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * * * *
159328991 GGATCCGGAGCATTAGTGCTAGTATGGTCGCAACCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159329056 GGCTACCGCTGATCGCACTTGAGCCTTGAATTTGAATTTAAATACAACCAAATAGCGTTTCGA-T
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159329120 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAA--AAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
*
159329183 GAGATATAAAATTGGAGGGGTGCAATACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159329219 CTCA-GGAGGTCACCCATCCTA-TACTACTCTAGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159329282 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
*
159329347 GGCTACCGCTGATCGCACTTAAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159329412 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
*
159329477 GAGATATAAAATTAGAGGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * * *
159329513 CCCATG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCATAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* * *
159329576 GGGATCCGGTGCATTAGTGCTGGTATGATTGCAACCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159329641 AGGCTAACCCTGATCGCAC-TGAGCCTCGAATCTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159329705 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAATGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATA-GAAAAAAATTAAA
*
159329770 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159329807 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159329871 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159329936 AGGCTACCCCTGATCACACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159330001 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
**
159330066 AGATATAAAA-TACAGGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159330100 CTCACCAA-GTGACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
*
159330164 GGGATCCGGTGCATTAGTGCTGGTATGAT--CACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* **
159330227 AGGCTACCCCT-ATCGCAC-TGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159330290 TG-TTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAAAAATGGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGAT--GAGATAAAAAAATAGAAAAAAATTAAA
*
159330354 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
159330391 CTCAC-AA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
159330454 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTT-T-TAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159330517 AGGCTACCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159330582 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAATAGAAAAAAATTAAATGA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
*
159330646 GATATAAAATTGGACGGGTGCAACACGAGGACTT
260 GATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159330680 CCCA-GAAGGTCACCCATCCTAGTACTACTCT-GCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159330743 GGGATCC-GTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159330807 AGGCTACCCCTGATCGCACTTGAGCGTCGAAATTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159330872 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAAATAGAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAAATAGAAAAAAATTAAAT
*
159330937 GAGATATAAAATTGGACGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159330973 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * *
159331036 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159331101 AGGCTACAGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCATTTCGAG
130 AGGCTAC-CCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* ** *
159331166 TGATTTATTTCGTAAATTAGAAATTAGTTAAACGATGAGAGATAAAAAAATAGAAAAAAATCAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGAT--GAGATAAAAAAATAGAAAAAAATTAAA
159331231 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159331268 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
** *
159331331 GGGATCCGGTGCATTAGTGCTGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159331396 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159331461 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAAAAAATTAA
** *
159331526 ATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159331564 CTCACTAA-ATCACCCATCCTAGTACTACTCTCGCCCAAGCATGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159331628 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * * * *
159331693 AGGCTACCCTGATCGCACTTGAGCGTCAAATTTCAATTTAAATACGACAAAATAGCATTTCAAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159331758 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
*
159331823 GATATAAAATTGGACGGGTGCAACACGAGGACTT
260 GATATAAAATTGGAGGGGTGCAACACGAGGACTT
* ** * *
159331857 CCCA-GAAGGTCACCCATCCTAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTTTTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159331921 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* * * *
159331986 GGCTACCGCTGATCGCACTTAAGCCTCGAATTTTAATTTAAATACAACCAAATAGCATTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159332051 GATTTATTTCGTAAATTAGTAATTAGTTAAACAATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
*
159332116 TGAGATATAAAATTGGAGGGGTGAAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * **
159332153 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTG-TAAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159332216 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * * *
159332281 AGGCAAACCCTGATCGCACCTGAGACTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGC-TACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159332346 TGATTTTTTTTGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAATGGAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAGAAAAAAATTAAAT
* *
159332411 GAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159332447 CTCACCAA-GTCACCCATCCTAGTACTAATCTCG-CCAAGCACGCTTAAATGC-GAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159332509 GGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGTGCATTCTATTTATATAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
159332574 GGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTG
131 GGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTG
* * *
159332639 ATTTATTTCGTAAATAACCAATTAGTTAAACGATTAGATATAAAAAAATGGAAAAAAATTAAATG
196 ATTTATTTCGTAAATAACTAATTAGTTAAACGA-T-GAGATAAAAAAATAGAAAAAAATTAAATG
*
159332704 AGATATAAAA-TAGAGGGGTGCAACAC-AGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159332737 CTCACCAA-GTCACCCATCCTAGTACTACTCTCG-CCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159332800 GGGATCCGGTACATTAGTGCTGGTATGATCGCACCCGTTAATTC-TGCGCATTCTATTT-TCTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159332863 AGGCTACCCTGATCGTACTTGAGCGTCGAATTTCAATTTAAA-ACGACCAAATAGCGTTTCGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159332927 GATTTATTTCGTGAATAACTAATTAGTTAAATGATGAGATATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
* *
159332992 GAGATATAAAATTGGAGGGGTGCAATAAGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159333028 CCCA-GGAGGTCACCCATCCTAGTACTACTCTAGCCCAAGCACGCGTAACTGCAGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * * *
159333092 GGATCCGGAGCATTAGTGCTGGTATGGTCGCAACCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* * * *
159333157 GGCTACCGCTGATTGCACTTGAGCCTCGAATTTGAATTTAAATACAACCAAATAGTGTTTCGATT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159333222 GAGTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
* *
159333287 TGAGATATAAAATTAGAGGGGTGCAATACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159333324 CTCA-GGAGGTCACCCATCCTAGTACTACTCTAGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * * *
159333388 GGATCCGGAGCATTAGTGCTGGTATGATCGCACTCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
*
159333453 GGCTACCGCTGATCGCACTTAAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159333518 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAA-ATGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATA-GAAAAAAATTAAAT
*
159333582 GAGATATAAAATTAGAGGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159333618 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTTAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159333681 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159333746 AGGCTAACCCTGATCACACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159333811 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAATGGAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAA
* *
159333876 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159333914 CTCACCAA-GTCAACCATCCTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159333978 GGATCTGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTT-CTGCATTCTATTTATATAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAA
* *
159334042 AGGCTACCCCTTATCGCACTTGAGCTTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159334107 TGATTTATTTCGTAAAT-AGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
*
159334171 TGAGATATAAAATTAGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159334208 CCCACG-AGGTCA-CCATCCTAGAACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** *
159334271 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * **
159334336 AGGCTACCCAT-ATCGCACATGAACCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAG
130 AGGCTACCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159334400 TG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAAAACTGGAAAAAAATTAA
194 TGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAA-TAGAAAAAAATTAA
* * *
159334464 ATGAGATGTAAAATAGGAAGGGTGCAACACGAGGACTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159334502 CTTACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * * * *
159334566 GGGATCCGGTGCATTAGTGCTAGTATGATCGAACTCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* ** * **
159334631 AGGCTACCCCTGATCGTACTTGAGTGTCGAATTTCAATTTAAATACGAATAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159334696 TGATTTATTTCATAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159334761 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159334796 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAATTGCGAAGTTCTGAT
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * * *
159334859 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCACATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159334924 AGGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTGAATACTACCAAATAGCATTTCGAG
130 AGGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159334989 TGATTTATTTCGTAAATTAGTAATTAGTTAAAC-ATGAGATATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
*
159335053 TGAGATATAAAATTGGAGGGGTGAAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159335090 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159335153 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159335218 AGGCTAACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159335283 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAATGGAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAGAAAAAAATTAAAT
* *
159335348 GAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159335384 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159335448 -GGATCCGGTGCATTAGTGCTGGTATAATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159335512 AGGCTACCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159335577 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAG-AAAAAATTAAATGA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
*
159335641 GATAT-AAATTGGACGGGTGCAACACGAGGACTT
260 GATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159335674 CCCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159335738 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
** *
159335803 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATA-ATTTTAGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159335867 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAATGGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
* **
159335932 TGAGATATAATA-TACAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159335968 CTCACCAA-GT-ACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** *
159336031 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTG-GCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * ** *
159336095 AGGCAACCCCAT-ATCGCACATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCAA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
*
159336159 GTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAAATT
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAAAAAATT
*
159336223 AAATGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
254 AAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159336263 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159336327 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159336392 AGGCTACCCTGATCACACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159336457 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
*
159336522 GATATAAAATTGGACGGGTGCAACACGAGGACTT
260 GATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159336556 CCCA-GAAGGTCA-CCATCCTAGTACTACTCTTGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159336619 GGGATCCAGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCTA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATG-TA
* *
159336684 AAGGCTACCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
129 AAGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159336749 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAA-ATGAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATA-GAAAAAAATTAAAT
*
159336813 GAGATATAAAATTGGACGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159336849 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * *
159336912 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159336977 AGGCTACAGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAG
130 AGGCTAC-CCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * ** * *
159337042 TGATTTATTTCGTAAATTAGTAATTAGTTAAGTGATGAGAGATAAAAAATAGAAAAAAATCAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAGAAAAAAATTAAAT
*
159337107 CAGATATAAAATTGGAGGGGTGCAACA-GAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159337142 CCCACG-AGGTCA-CCAACCTAGAACGACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
** *
159337204 GGGATCCGGTGCATTAGTGCTGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159337269 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159337334 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGACATATAAAAAAAATGGAAAAAAAATTA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATG--AGAT-AAAAAAATAG-AAAAAAATTA
** *
159337399 AATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159337438 CTCACTAA-ATCACCCATCCTAGTACTACTCTCGCCCAAGCATGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159337502 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
*
159337567 AGGCTACCCCTGAT-GCACTTGAG-CTC-AATTTCAATTTAAATACGA-CAAATAGCGTTTC-AG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159337627 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159337692 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* ** * *
159337727 CCCA-GAAGGTCACCCATCCTAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTTTTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * *
159337791 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* * *
159337856 GGCTACAGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAGT
131 GGCTAC-CCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159337921 GATTTATTTCGTAAATTAGTAATTAGTTAAACGCGATGAGAGATAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAA--CGATGAGATA-AAAAAATAGAAAAAAATTAAA
159337986 T--GATAT-AAATTGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159338020 C-CACG-AGGTCACCAATCCTAGAACGACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
** * *
159338082 GGGATCCGGTGCATTAGTGCTGGTATGATTACACCCGTCAATTCTTGCGGATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159338147 AGGCTAACCCTGATCGCAC-TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159338211 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAATATAAAAAAATGGAAAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATG-AGATAAAAAAAT--AGAAAAAAATTAA
*
159338276 ATGAGATAT-AAA-TAGAGGGGTGCAACACGAGGA-TT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
159338311 CTCAC-AA-GTCACCCATCCTAGTACTACTCTCG-CCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159338373 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159338438 AGGCTACCCCTGATCACACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159338503 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159338568 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159338603 CCCA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159338667 GGGATCCAGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159338732 AGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159338797 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAAATAGAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAAATAGAAAAAAATTAAAT
*
159338862 GAGATATAAAATTGGACGGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159338898 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * *
159338961 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
** *
159339026 AGGCTAAGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACTACCAAATA--GTTTCGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * * *
159339089 GATTTATTTCGTAAATTAGTAATTAGTTAAGCGATGAGATAAAAAAAATAGAAAAAATATCAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAAATAGAAAAAA-ATTAAAT
*
159339154 CAGATATAAAATTGGAGGGGT-CAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159339189 CCCACG-AGGTCACCAATCCTAGAACGACTCTCGCCCAAGCACGC-TAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
** *
159339251 GGGATCCGGTGCATTAGTGCTGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159339316 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159339381 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAATATAAAAAAAATGGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATG-AGAT-AAAAAAATAGAAAAAAATTAAA
** *
159339446 TGAGATATAAAATAAGA-GGGTGCAACACGAGGATTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159339482 CTCACTAA-ATCACCCATCCTAGTACTACTCTCGCCCAAGCATGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159339546 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
*
159339611 AGGCTACCCCTGATCGCACTTGAG-CTCGAATTTCAA-TTAAATACGA-CAAATAGCGTTT-GAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159339672 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159339737 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* ** *
159339772 CCCA-G-AGGTCACCCATCCTAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTT-TGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * *
159339834 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159339899 GGCTACCGCTGATCGCACTTGAG-CTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* * *
159339963 GATTTATTTCGTAAATTAGTAATTAGTT-AACGATGAGAGATAAAAAAATAGAAAAAAATCAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGAT--GAGATAAAAAAATAGAAAAAAATTAAAT
159340027 GAGATATAAAATTGGA-GGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159340062 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159340125 GGGATCCGGTGCATTAGTGCTGGTATGAT-TCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159340189 AGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159340254 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAAAAAATTAA
** *
159340319 ATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
159340357 CTCAC-AA--TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGC-GAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
159340418 -GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG-GCATTCTA--TA--TAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
159340477 AGGCTACCCCTGATCGCACTTGAG-CTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159340541 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAA-AGAAAAAAAATTAAAT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAG-AAAAAAATTAAAT
159340605 GAGATATAAAATTGGA-GGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159340640 CCCA-GAAGGTCACCCATCCTAGTACTACTCT-GCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* *
159340703 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159340768 AGGCTACCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACC-AATAGCGTTTCGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159340832 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAAATAGAAAAAAATTAAATG
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGAT-AAAAAAATAGAAAAAAATTAAATG
*
159340897 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
159340932 C-CA-GAAGGTCACCCATCCTAGTACTACTCT-GCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * *
159340994 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
159341059 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159341124 GATTTATTTCGTAAAT-AGTAATTAGTT-AACGATGAGATATAAAAAAATAGAAAAAAA-TAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
159341186 GAGATATAAAATTGGA-GGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159341221 CCCACG-AGGTCA-CCATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
*
159341283 GGGATCCGGTGCATTAGTGCTGGTATGAT-GCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159341347 AGGCTAACACTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159341412 TGATTTATTTCGTAAGTAACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
*
159341477 TGAGATATAAAATAGGAGGGGTGCAACACGAGGA-TT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159341513 CTCACCAA-GTCA-CCATCCTAGTACTA-TCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
*
159341575 GGAT-CGGTGCATTAGTGCT-GTATGATCGCA-CCGTCAATTCTT-CTGCATTCTATTTATATAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAA
*
159341636 AGGCTACCCCTTATCGCACTTGAG-CTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159341700 TGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
*
159341765 TGAGATA-AAAA-TAGA-GGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159341799 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** *
159341863 GGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* **
159341928 AGGCTACCCAT-ATCGCA-TATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGA
130 AGGCTACCC-TGATCGCACT-TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* *
159341991 GTG-TTTATTTCGTAAATAACTAATTAGTTAAACGATGTGATATAAAAAATGGAAAAAAATTAAA
193 GTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAGAAAAAAATTAAA
*
159342055 TGAG--ATAAAATAGGA-GGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159342089 CT-ACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* *
159342152 GGATCCGGTGCATTAGTGCT-GTATGATCGCA-CCGTCAATTCTTGCGCATTCTATTTTTGCAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* **
159342215 GGCTACCCCTGATCGCACTTGAG--TCGAATTTCAATTTAAATACGAATAAATAGCGTTTCGAGT
131 GGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
159342278 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGA
*
159342343 GATATAAAATTGGACGGGTGCAACACGAGGACTT
260 GATATAAAATTGGAGGGGTGCAACACGAGGACTT
159342377 C-CTA-GAAGGTCACCCATCCTAGTACTACTCT-GCCCAAGCACGCTTAACTGCGGAGTTCTGAT
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * * *
159342439 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCACATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
*
159342504 AGGCTA-CCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCATTTCGAGT
130 AGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159342568 GATTTA-TTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
159342632 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159342669 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159342732 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159342797 AGGCTAACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159342862 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
* *
159342927 TGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159342964 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159343028 -GGATCCGGTGCATTAGTGCTGGTATAATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159343092 AGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGA-CAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159343156 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAA-AGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159343220 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159343255 CCCA-GAAGGTCA-CCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159343318 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
*
159343383 GGCTACCGCTGATCACACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159343448 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAAAAATTAAAT
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAAT
159343513 GAGATATAAAATTGGA-GGGTGCAACACGAGGACTT
258 GAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159343548 C-CACG-AGGTCA-CCATCCTAG-ACTACTCTCGCCCAAGCACGCATTAACTGC-AAGGTTCTGA
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGC-TTAACTGCGGA-GTTCTGA
* *
159343608 TGGGATCCGGTGCATTAGTGCTGGTATGATTGCA-CCGTCAATTCTTGCGCATTCTATTTATATA
64 TGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTA
* * *
159343672 AAGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGA
129 AAGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
*
159343737 GTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAATGGAAAAAAATTAAA
193 GTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAGAAAAAAATTAAA
* *
159343802 TGAGATATAAAA-TAGAGGGGTGCAACACGAGGATTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159343838 CTCAC-AA--TCACCCATCCTAGTACTACTCTCGCCCAAGCATGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* *
159343900 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159343965 GGCTACCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGA-CAAATAGCGTTTCGAGTG
131 GGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTG
*
159344029 ATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGGAAAAAATTAAATGAG
196 ATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGAG
*
159344094 ATATAAAATTGGACGGGTGCAACACGAGGA-TT
261 ATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159344126 CCCA-GAAGGTCACCCATCCTAGTACTACTCT--CCCAAGCACGCTTAACTGCAGAGTT-TGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159344187 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159344252 GGCTACCGCTGATCGCACTTGAGCCTCGAATTTTAATTTAAATACGACCAAATAGCATTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159344317 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAATAGAAAAAAATTAAATG
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAGAAAAAAATTAAATG
159344382 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * **
159344417 CCCGCG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTG-TAAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159344480 GGGATCCGGTGCATTAGTGCTGGTATGATTGC-CCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159344544 AGGCAAACCCTGATCGCAC-TGAGACTCGAATTTGAATTTAAATACGACCAAATA-CGTTTCGAG
130 AGGC-TACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159344607 TGATTT-TTTTGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAATGGAAAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAAT--AGAAAAAAATTAA
* *
159344671 ATGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159344709 CTCACCAA-GTCACCCATCCTAGTACTAATCTCGTCCAAGCACGCTTAAATGC-GAGTTCTAATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * *
159344772 GGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGCGCATTCTATTTATATAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159344837 GGCTAACCCTGATCGCAC-TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGT
131 GGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159344901 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAAAAAAAAAAATTAAATG
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAATAGAAAAAAATTAAATG
** *
159344966 AGATATAAAATAAGAGGGGTGCAACACGAGGATTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159345001 CTCACTAA-GTCACCCATCCTAGTACTACTCT-GCCCAAGCATGCTTAAACTGTGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159345064 GGGATCCGGTACATTAGTGCTGGTATGATCGCACCCGTTAATTC-TGCGCATTCTATTCT-TCTA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATT-TATGTA
* * * * *
159345127 AAGGCTATCCCTGGTCGTACTTGAGCGTCGAATTTCAATTTAAA-ACGACCAAATAGTGTTTCGA
129 AAGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
*
159345191 GTGATTTATTTCGT-AATAACTAATTAGTTAAACGATAGATATAAAAAAATAGAAAAAAATTAAA
193 GTGATTTATTTCGTAAATAACTAATTAGTTAAACGAT-GAGATAAAAAAATAGAAAAAAATTAAA
* *
159345255 TGAGATATAAAA-TAGA-GGGTGCAATACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159345290 CTCA-GGAGGTCACCCATCCTAGTACTACTCTAGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159345354 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
*
159345419 GGCTACCGCTGATCGCACTTAAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159345484 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAGTAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAA-TAGAAAAAAATTAAA
*
159345549 TGAGATATAAAATTAGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * * *
159345586 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTTAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* *
159345649 GGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159345714 AGGCTAACCCTGATCACACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
159345779 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAGAAAAAAATAGAAAATAAATT
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT--AAAAAAATAGAAAA-AAATT
* *
159345844 AAATGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
254 AAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159345884 CTCACCAA-GTCAACCATCCTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159345948 GGATCTGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTT-CTGCATTCTATTTATATAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAA
* * *
159346012 AGGCTACCCCTTATCGCACTTGAGCTTCGAATTTGAATTTAAATACAACCAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* * *
159346077 TGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATCGAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAA
*
159346142 ATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * *
159346180 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* ** *
159346244 GGGATCCGGTGTATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* **
159346309 AGGCTACCCAT-ATCGCA-TATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGA
130 AGGCTACCC-TGATCGCACT-TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* * *
159346372 GTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAAAAACTGGCAAAAAATTA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAAAA-TAGAAAAAAATTA
* * *
159346436 AATGAGATGTAAAATAGGAAGGGTGCAACACGAGGACTT
255 AATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159346475 CTTACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * * *
159346539 GGGATCCGGTGCATTAGTGCTAGTATGATCGCACTCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* ** * **
159346604 AGGCTACCCCTGATCGCACCTGAGTGTCGAATTTCAATTTAAATACGAATAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159346669 TGATTTATTTCATAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159346734 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159346769 C-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCTTAACTACGGAGTTCTGAT
1 CTC-ACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAT
* * * *
159346832 GGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCACATTGTATTTATGTAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* *
159346897 AGGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTGAATACGACCAAATAGCATTTCGAG
130 AGGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
* *
159346962 TGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAA
159347027 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
256 ATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* * * *
159347065 CCCACG-AGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGAT
* * * *
159347128 GGGATCCGGAGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGTGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
*
159347193 AGGCTAACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTAGAG
130 AGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159347258 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAA
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAA
* *
159347323 TGAGATATAAAATAGGAGGGGTGCAACACGAGGATTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159347360 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
** * * *
159347424 ACGATCCGGTGCATTAGTGCTGGTATAATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * *
159347489 AGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159347554 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAAATAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
* *
159347619 AGATATAATATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159347654 CCCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGAACGCTTAACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159347718 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
** *** *
159347783 GGCTACCGAGAATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAATATTTAGAGT
131 GGCTACCCTG-ATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
*
159347848 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAAAAAATTAAA
* * ** *
159347913 TCAGATATAATA-TACA-GGGTGCAGCACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159347948 CTCACCAA-GTTACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* ** * *
159348012 GGGATCCGGTGGATTAGTGCTGGTATGATCTTACCCGTCAATGCTTGCGCATTCTATTTATATAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * ** *
159348077 AGGCAACCCCAT-ATCGCACATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCAA
130 AGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGA
* * *
159348141 GTG-TCTTATTTCGTAAATAACAAATTAGTTAAACGA-GATATAAAAAAATGGAAAAAAATTAAA
193 GTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAA
*
159348204 TGAGATATAAAATAGGAGGGGTGCAACACGAGGACTT
257 TGAGATATAAAATTGGAGGGGTGCAACACGAGGACTT
*
159348241 CTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGAT
* * *
159348305 GGGATCCGGTGTATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAA
65 GGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAA
* * * *
159348370 AGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCAAG
130 AGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAG
*
159348435 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAAAAGAAAAAAATTAAATG
194 TGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATG
*
159348500 AGATATAAAATTGGACGGGTGCAACACGAGGACTT
259 AGATATAAAATTGGAGGGGTGCAACACGAGGACTT
* *
159348535 CCCA-GAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTCACTGCGGAGTTCTGATG
1 CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
* * * *
159348599 GGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAA
66 GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
* *
159348664 GGTTACCGCTGATCACACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
131 GGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGT
* *
159348729 GATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAAAAATTAAA
195 GATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAAAAATAGAAAAAAATTAAA
159348794 TGAGATATAAAATTGGAGGGGTGC
257 TGAGATATAAAATTGGAGGGGTGC
159348818 TGTAACACCC
Statistics
Matches: 30548, Mismatches: 3503, Indels: 2983
0.82 0.09 0.08
Matches are distributed among these distances:
283 23 0.00
284 50 0.00
285 117 0.00
286 140 0.00
287 311 0.01
288 580 0.02
289 1076 0.04
290 1546 0.05
291 2181 0.07
292 2519 0.08
293 4371 0.14
294 4250 0.14
295 5017 0.16
296 5052 0.17
297 885 0.03
298 811 0.03
299 159 0.01
300 29 0.00
301 18 0.00
302 33 0.00
303 16 0.00
304 17 0.00
305 22 0.00
306 20 0.00
307 19 0.00
308 12 0.00
309 20 0.00
310 16 0.00
311 25 0.00
312 25 0.00
313 7 0.00
314 22 0.00
315 24 0.00
316 11 0.00
317 29 0.00
318 30 0.00
319 27 0.00
320 52 0.00
321 48 0.00
322 64 0.00
323 40 0.00
324 52 0.00
325 58 0.00
326 55 0.00
327 56 0.00
328 45 0.00
329 26 0.00
330 32 0.00
331 42 0.00
332 32 0.00
333 37 0.00
334 25 0.00
335 17 0.00
336 40 0.00
337 36 0.00
338 20 0.00
339 36 0.00
340 20 0.00
341 9 0.00
342 11 0.00
343 13 0.00
344 17 0.00
345 9 0.00
346 19 0.00
347 18 0.00
348 15 0.00
349 14 0.00
350 16 0.00
351 8 0.00
352 9 0.00
353 16 0.00
354 3 0.00
355 3 0.00
356 2 0.00
357 3 0.00
358 8 0.00
360 4 0.00
361 4 0.00
362 3 0.00
364 1 0.00
ACGTcount: A:0.34, C:0.19, G:0.19, T:0.28
Consensus pattern (293 bp):
CTCACGAAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATG
GGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAA
GGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTG
ATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAAATAGAAAAAAATTAAATGAG
ATATAAAATTGGAGGGGTGCAACACGAGGACTT
Found at i:159323619 original size:46 final size:46
Alignment explanation
Indices: 159323569--159323744 Score: 207
Period size: 46 Copynumber: 3.8 Consensus size: 46
159323559 ATGTTGAGCA
*
159323569 TCCGAACTCGTTGAATTGAGTCCGAGTTCACTTATGGATGCGAATG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAATG
* * *
159323615 TCCGAACTCGTTGAGTTGAGTCCGAGTTC-GTGA--GATG-TAACTAGG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAA-T--G
*
159323660 CATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAACG
1 --TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAATG
* * *
159323708 CCCGAGCTCGTTGAGTTGAGTCCGAGTTCGCTTATGG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGG
159323745 GCGGGTTACA
Statistics
Matches: 110, Mismatches: 11, Indels: 18
0.79 0.08 0.13
Matches are distributed among these distances:
42 2 0.02
43 5 0.05
45 3 0.03
46 62 0.56
47 29 0.26
48 3 0.03
50 4 0.04
51 2 0.02
ACGTcount: A:0.21, C:0.21, G:0.29, T:0.29
Consensus pattern (46 bp):
TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAATG
Found at i:159323725 original size:93 final size:93
Alignment explanation
Indices: 159323566--159323737 Score: 308
Period size: 93 Copynumber: 1.8 Consensus size: 93
159323556 AGGATGTTGA
* *
159323566 GCATCCGAACTCGTTGAATTGAGTCCGAGTTCACTTATGGATGCGAATGTCCGAACTCGTTGAGT
1 GCATCCGAACTCGTTGAATTGAGTCCGAGTTCACTTATGGATGCGAACGCCCGAACTCGTTGAGT
159323631 TGAGTCCGAGTTCGTGAGATGTAACTAG
66 TGAGTCCGAGTTCGTGAGATGTAACTAG
* *
159323659 GCATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAACGCCCGAGCTCGTTGAGT
1 GCATCCGAACTCGTTGAATTGAGTCCGAGTTCACTTATGGATGCGAACGCCCGAACTCGTTGAGT
159323724 TGAGTCCGAGTTCG
66 TGAGTCCGAGTTCG
159323738 CTTATGGGCG
Statistics
Matches: 75, Mismatches: 4, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
93 75 1.00
ACGTcount: A:0.22, C:0.22, G:0.29, T:0.28
Consensus pattern (93 bp):
GCATCCGAACTCGTTGAATTGAGTCCGAGTTCACTTATGGATGCGAACGCCCGAACTCGTTGAGT
TGAGTCCGAGTTCGTGAGATGTAACTAG
Found at i:159325679 original size:295 final size:295
Alignment explanation
Indices: 159325049--159348817 Score: 34813
Period size: 293 Copynumber: 81.1 Consensus size: 295
159325039 GGGGCGTTAC
* * *
159325049 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGACGACTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
*
159325112 CTAGTACTACTCTCGCCCAAGCATGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * * * * * * *
159325177 CTGGTATGATCACACCCGTCAAATCTTGCACATTCTATTTTTGCAAAGGCTACACCGGATGGCAA
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTAC-CCTGATCGCAC
* * * *
159325242 TTGAGCGTCGAATTTCAATTTAAATATGACAAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159325307 CTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159325343 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159325407 TAGTACTACTCTCGCCCAAGCATGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGCGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * * *
159325472 GGTATGATCGCACCCATCAGTTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCACACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * *
159325537 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159325602 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159325638 AAATTAAATGAGATATAAAATTAGAGGGGTGAAAAACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159325702 TAGAACTACTCTCGCCCAAGCACGCATAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159325766 TGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159325831 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159325896 TAATTAGTTAAACGATGAGATATAGAAAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATAT--AAAAAAATAGAAAA
* ** *
159325935 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTTACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
* * *
159325998 CTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGGAGTTCTCATGGGATCCGGTGCATTAGTGA
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * ** * * * * *
159326063 TGTTATGATCGTACTTGTCAACTCTT-CTACATTCTATTTATATAAAGGCTACCCCTTACCGCAC
130 TGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
* *
159326127 TTGAGCTTCAAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
* * * *
159326192 CCAATTAGTAAAACGATTAGATATAAAAAAA-ATGGAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATA-GAAAA
* * * *
159326230 AAATTAAATGAGATATAAAA-TACAGGGGTGCAACACGAGGACTTCTCACCAA-GTGACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
**
159326293 TAGCGCTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
** *
159326358 TGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCAT-ATCGCAC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCC-TGATCGCAC
* * **
159326422 ATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAGTG-TCTTATTTCGTAAATA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATA
* * *
159326486 AATAATTAGTTAAATGATGAGATATAAAAAAATGGAAAA
257 ACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159326525 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
* * *
159326588 CTAGTACTACTCTTGCCCAAGCACGCTTAAACTGCGGAGTTCTAATGGGATCCAGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* *
159326653 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
* *
159326718 TTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
*
159326783 CTAATTAGTTAAATGATGAGATA-AAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159326820 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCTA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159326884 TAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159326949 GGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAAGGCTACAGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTAC-CCTGATCGCACTT
* * * *
159327014 GAGCCTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
* *
159327079 AATTAGTTAAGCGATGAGAGATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159327115 AAATCAAATCAGATATAAAATTGGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159327179 TAGAACGACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
** * *
159327243 TGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* * *
159327308 TGAGCCTCTAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159327373 TAATTAGTTAAACGATGAGATATAAAAAAAATGGAAAAA
259 TAATTAGTTAAACGATGAGATAT-AAAAAAATAG-AAAA
* * * *
159327412 AAATTAAATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTTCTCACTAA-GTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159327476 TAGTACTACTCTGGCCCAAGCATGCTTAAACTGTGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159327541 TGGTATGATCGCACCCGTCAATTCTTGCACATTCTATTTTTGCAAAGGCTACCCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
* * * * *
159327606 TGAGCGTCAAATTTCAATTTAAATACGACAAAATAGCGTTTCAAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159327671 TAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* **
159327706 AAATTAAATGAGATATAAAATTGGCCGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
** * * *
159327770 TAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTTTTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * *
159327835 GGTATGATCGCACCCATCAATTCTTGCACTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * * * *
159327900 GAGCCTCGAATTTTAATTTAAATAC-ACCAAATAGCATTTCGAGTGATTTATTTCATAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159327964 AATTAGTTAAACAATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159328000 AAATTAAATGAGATATAAAATTGGAGGGGTG-AACACGAGGACTTCCCGCG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* **
159328063 TAGAACTACTCTCGCCCAAGCACGCTTAACTG-TAAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * * * *
159328127 TGGTATGATTGCACCCGTCAATTCTTGTGCATTCTATTTATATAAAGGCAACCCTGATCGCACCT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTT
* * *
159328192 GAG-CTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTT-TTTTGTAAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159328255 AATTAGTTAAACGATGAGATATAAAAAAATGGAAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAG-AAAA
* * *
159328292 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
* * *
159328355 CTAGTACTAATCTCGTCCAAGCACGCTTAAATGC-GAGTTCTGATGGGATCCGGTGCATTAGTGC
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * * * *
159328419 TGTTATGATCGCACTCGTCAATTCTTGTGCATTCTATTTATATAAAGGCTACCCCTTATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
*
159328484 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTTGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
* * *
159328549 CAATTAGTTAAACGATTAGATATAAAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159328586 AAATTAAATGAGATATAAAA-TAGAGGGGTGCAACACGAGGACTTCTCACCAA-GTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159328649 TAGTACTACTCTCGGCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTACATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * * *
159328714 TGGTATGATCGCACCCGTTAATTCCTGCGCATTCTATTCT-TCTAAAGGCTATCCCTGATCGTAC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATT-TATGTAAAGGCTA-CCCTGATCGCAC
* * * *
159328778 TTGAGCGTCGAATTTCAATTTAAAAACGACCAAATAGCGTTTCGAGTGATTTATTTCGTGAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159328843 CTAATTAGTTAAACGATGAGATATAAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* * * *
159328882 AAATTAAATGAGATATAAAATTGGAGGGGTGCAATAAGAGGACTTCCCA-GGAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* ** * * *
159328946 TAGCACTACTCTATCCCAAGCACGCGTAACTGCAGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * * * *
159329011 AGTATGGTCGCAACCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* *
159329076 GAGCCTTGAATTTGAATTTAAATACAACCAAATAGCGTTTCGA-TGATTTATTTCGTAAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159329140 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159329176 AAA--AAATGAGATATAAAATTGGAGGGGTGCAATACGAGGACTTCTCA-GGAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159329238 TA-TACTACTCTAGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159329302 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * *
159329367 AAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159329432 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159329468 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCATG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159329532 TAGAACTACTCTCGCCCAAGCACGCATAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159329596 TGGTATGATTGCAACCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCAC-
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* * *
159329660 TGAGCCTCGAATCTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159329725 TAATTAGTTAAACGATGAGATATAAAAAAA-ATGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATA-GAAAA
* *
159329762 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159329825 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * *
159329890 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCACAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
* *
159329955 TTGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159330020 CTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159330056 AAATTAAATGAGATATAAAA-TACAGGGGTGCAACACGAGGACTTCTCACCAA-GTGACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
159330119 TAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
*
159330184 TGGTATGAT--CACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCT-ATCGCAC-
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
* **
159330245 TGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAGTG-TTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
* *
159330309 TAATTAGTTAAACGATGCGATATAAAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
*
159330346 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTTCTCAC-AA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159330408 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
159330473 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTT-T-TAAAGGCTACCCTGATCGCACT
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACT
* *
159330536 TGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159330601 TAATTAGTTAAACGATGAG--AT-AAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159330635 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
159330699 TAGTACTACTCT-GCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCC-GTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159330762 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
* * *
159330827 TGAGCGTCGAAATTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159330892 TAATTAGTTAAACGATGAGATA-AAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159330928 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCTA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159330992 TAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159331057 GGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAAGGCTACAGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTAC-CCTGATCGCACTT
* * **
159331122 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGA
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159331187 AATTAGTTAAACGATGAGAGATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159331223 AAATCAAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159331287 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
** * *
159331351 TGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159331416 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159331481 TAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAG-AAAA
* * * * *
159331519 AAATTAAATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTTCTCACTAA-ATCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159331583 TAGTACTACTCTCGCCCAAGCATGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159331648 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCTGATCGCACTT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTT
* * * * * *
159331713 GAGCGTCAAATTTCAATTTAAATACGACAAAATAGCATTTCAAGTGATTTATTTCGTAAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159331778 AATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159331812 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
** * * *
159331876 TAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTTTTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159331941 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * * * * *
159332006 AAGCCTCGAATTTTAATTTAAATACAACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159332071 AATTAGTTAAACAATGAGATATAAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* * * *
159332108 AAATTAAATGAGATATAAAATTGGAGGGGTGAAACACGAGGACTTCCCGCG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* **
159332172 TAGAACTACTCTCGCCCAAGCACGCTTAACTG-TAAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * * *
159332236 TGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCAAACCCTGATCGCACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGC-TACCCTGATCGCACT
* * * * *
159332301 TGAGACTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTTTTTTGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159332366 TAATTAGTTAAACGATGAGATAT-AAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159332402 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
* *
159332465 CTAGTACTAATCTCG-CCAAGCACGCTTAAATGC-GAGTTCTGATGGGATCCGGTGCATTAGTGC
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * * *
159332528 TGTTATGATCGCACTCGTCAATTCTTGTGCATTCTATTTATATAAAGGCTACCCTGATCGCACTT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTT
*
159332593 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACC
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
* *
159332658 AATTAGTTAAACGATTAGATATAAAAAAATGGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159332694 AAATTAAATGAGATATAAAA-TAGAGGGGTGCAACAC-AGGACTTCTCACCAA-GTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159332756 TAGTACTACTCTCG-CCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTACATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159332820 TGGTATGATCGCACCCGTTAATTC-TGCGCATTCTATTT-TCTAAAGGCTACCCTGATCGTACTT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTT
* * *
159332883 GAGCGTCGAATTTCAATTTAAA-ACGACCAAATAGCGTTTCGAGTGATTTATTTCGTGAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159332947 AATTAGTTAAATGATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159332983 AAATTAAATGAGATATAAAATTGGAGGGGTGCAATAAGAGGACTTCCCA-GGAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * * *
159333047 TAGTACTACTCTAGCCCAAGCACGCGTAACTGCAGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * * * *
159333112 GGTATGGTCGCAACCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATTGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * * *
159333177 GAGCCTCGAATTTGAATTTAAATACAACCAAATAGTGTTTCGATTGAGTTATTTCGTAAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159333242 AATTAGTTAAACGATGAGATATAAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* * *
159333279 AAATTAAATGAGATATAAAATTAGAGGGGTGCAATACGAGGACTTCTCA-GGAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159333343 TAGTACTACTCTAGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * *
159333408 GGTATGATCGCACTCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * *
159333473 AAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159333538 AATTAGTTAAACGATGAGATATAAAAAAAT-GAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
*
159333573 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159333637 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTTATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * * *
159333701 TGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCACACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159333766 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159333831 TAATTAGTTAAACGATGAGATATAAAAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* * * *
159333869 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCAACCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
* *
159333932 CTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCTGGTGCATTAGTGC
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * * *
159333997 TGTTATGATCGCACTCGTCAATTCTT-CTGCATTCTATTTATATAAAGGCTACCCCTTATCGCAC
130 TGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
*
159334061 TTGAGCTTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAAT-A
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
*
159334125 GTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
159334163 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCA-CCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159334226 TAGAACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
** * *
159334291 TGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCAT-ATCGCACA
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCC-TGATCGCACT
* * **
159334355 TGAACCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAGTG-TCTTATTTCGTAAATAA
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATAA
* * *
159334419 CTAATTAGTTAAACGATGCGATATAAAAAACTGGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * ** *
159334457 AAATTAAATGAGATGTAAAA-TAGGAAGGGTGCAACACGAGGACTTCTTACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159334520 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * * * * *
159334585 CTAGTATGATCGAACTCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGTAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
** * ** *
159334650 TTGAGTGTCGAATTTCAATTTAAATACGAATAAATAGCGTTTCGAGTGATTTATTTCATAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159334715 CTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159334751 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCTA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * * *
159334815 TAGTACTACTCTTGCCCAAGCACGCTTAATTGCGAAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159334880 GGTATGATCGCACCCATCAATTCTTGCACATTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * * * *
159334945 GAGCCTCGAATTTGAATTTGAATACTACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159335010 AATTAGTTAAAC-ATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159335045 AAATTAAATGAGATATAAAATTGGAGGGGTGAAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159335109 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* *
159335173 TGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159335238 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159335303 TAATTAGTTAAACGATGAGATAT-AAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159335339 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159335402 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT-GGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * *
159335466 CTGGTATAATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCTGATCGCACT
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACT
* * *
159335531 TGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159335596 TAATTAGTTAAACGATGAG--ATAAAAAAATAG-AAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159335630 AAATTAAATGAGATAT-AAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159335693 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159335758 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
** *
159335823 GAGCCTCGAATTTGAATTTAAATACGACCAAATA-ATTTTAGAGTGATTTATTTCGTAAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159335887 AATTAGTTAAACGATGAGATATAAAAAAAATGGAAAA
260 AATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* * * *
159335924 AAATTAAATGAGATATAATA-TACAGGGGTGCAACACGAGGACTTCTCACCAA-GT-ACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
159335986 TAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
** * *
159336051 TGGTATGATCTTACCCGTCAATTCTTG-GCATTCTATTTATATAAAGGCAACCCCAT-ATCGCAC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCC-TGATCGCAC
* * ** *
159336114 ATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCAAGTG-TCTTATTTCGTAAATA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATA
*
159336178 ACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAA
257 ACTAATTAGTTAAACGATGAGATATAAAAAAATAG-AAAA
* *
159336218 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159336281 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * *
159336346 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCTGATCACACT
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACT
* *
159336411 TGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159336476 TAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159336511 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCA-CCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159336574 TAGTACTACTCTTGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCAGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
*
159336639 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCTAAAGGCTACCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATG-TAAAGGCTACCCTGATCGCACT
* *
159336704 TGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159336769 TAATTAGTTAAACGATGAGATA-AAAAAAAT-GAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159336804 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCTA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159336868 TAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159336933 GGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAAGGCTACAGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTAC-CCTGATCGCACTT
* * * *
159336998 GAGCCTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
** *
159337063 AATTAGTTAAGTGATGAGAGAT-AAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159337098 AAATCAAATCAGATATAAAATTGGAGGGGTGCAACA-GAGGACTTCCCACG-AGGTCA-CCAACC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159337160 TAGAACGACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
** * *
159337224 TGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159337289 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
* *
159337354 TAATTAGTTAAACGATGACATATAAAAAAAATGGAAAAA
259 TAATTAGTTAAACGATGAGATAT-AAAAAAATAG-AAAA
* * * * *
159337393 AAATTAAATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTTCTCACTAA-ATCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159337457 TAGTACTACTCTCGCCCAAGCATGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159337522 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGAT-GCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
*
159337586 TGAG-CTC-AATTTCAATTTAAATACGA-CAAATAGCGTTTC-AGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159337647 TAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159337682 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
** * * *
159337746 TAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTTTTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159337811 GGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAAGGCTACAGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTAC-CCTGATCGCACTT
* * * *
159337876 GAGCCTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159337941 AATTAGTTAAACGCGATGAGAGAT-AAAAAATAGAAAA
260 AATTAGTTAAA--CGATGAGATATAAAAAAATAGAAAA
* *
159337978 AAATTAAAT--GATAT-AAATTGGAGGGGTGCAACACGAGGACTT-CCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159338038 TAGAACGACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
** * *
159338102 TGGTATGATTACACCCGTCAATTCTTGCGGATTCTATTTATATAAAGGCTAACCCTGATCGCAC-
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159338166 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159338231 TAATTAGTTAAACGATGA-ATATAAAAAAATGGAAAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAAT--AGAAAA
*
159338269 AAATTAAATGAGATAT-AAA-TAGAGGGGTGCAACACGAGGA-TTCTCAC-AA-GTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
159338329 TAGTACTACTCTCG-CCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159338393 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCACACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
* *
159338458 TGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159338523 TAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159338558 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159338622 TAGTACTACTCTTGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCAGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159338687 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
* *
159338752 TGAGCGTCGAATTTCAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159338817 TAATTAGTTAAACGATGAGATA-AAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159338853 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCTA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159338917 TAGTACTACTCTTGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * **
159338982 GGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAAGGCTAAGCTGATCGCACTTG
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTTG
* * *
159339047 AGCCTCGAATTTGAATTTAAATACTACCAAATA--GTTTCGAGTGATTTATTTCGTAAATTAGTA
196 AGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTA
*
159339110 ATTAGTTAAGCGATGAGATA-AAAAAAATAGAAAA
261 ATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159339144 AATATCAAATCAGATATAAAATTGGAGGGGT-CAACACGAGGACTTCCCACG-AGGTCACCAATC
1 AA-ATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
* * *
159339207 CTAGAACGACTCTCGCCCAAGCACGC-TAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTG
** *
159339270 CTGGTATGATTACACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCAC
* * *
159339335 CTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
*
159339400 CTAATTAGTTAAACGATGA-ATATAAAAAAAATGGAAAA
258 CTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* * * * *
159339438 AAATTAAATGAGATATAAAATAAGA-GGGTGCAACACGAGGATTTCTCACTAA-ATCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159339501 TAGTACTACTCTCGCCCAAGCATGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159339566 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
*
159339631 TGAG-CTCGAATTTCAA-TTAAATACGA-CAAATAGCGTTT-GAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159339692 TAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159339727 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-G-AGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
** * *
159339790 TAGTACTACTCTTACCCAAGCACGCTTAACTGCAGAGTT-TGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* *
159339854 GGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * * *
159339919 GAG-CTCGAATTTGAATTTAAATACTACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159339983 AATTAGTT-AACGATGAGAGATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159340018 AAATCAAATGAGATATAAAATTGGA-GGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159340081 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159340145 TGGTATGAT-TCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159340209 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159340274 TAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAG-AAAA
* * *
159340312 AAATTAAATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTTCTCAC-AA--TCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
159340374 TAGTACTACTCTCGCCCAAGCACGCTTAAACTGC-GAGTTCTGAT-GGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
159340437 TGGTATGATCGCACCCGTCAATTCTTG-GCATTCTA--TA--TAAAGGCTACCCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
159340497 TGAG-CTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159340561 TAATTAGTTAAACGATGAGATA-AAAAAAAGA-AAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
*
159340596 AAATTAAATGAGATATAAAATTGGA-GGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
159340659 TAGTACTACTCT-GCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159340723 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCTGATCGCACTT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTT
* *
159340788 GAGCGTCGAATTTCAATTTAAATACGACC-AATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159340852 AATTAGTTAAACGATGAGATA-AAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159340887 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTT-CCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159340950 TAGTACTACTCT-GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* *
159341014 GGTATGATCGCACCCATCAATTCTTGCGCATTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
*
159341079 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAAT-AGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159341143 AATTAGTT-AACGATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
*
159341178 AAA-TAAATGAGATATAAAATTGGA-GGGTGCAACACGAGGACTTCCCACG-AGGTCA-CCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159341239 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159341303 TGGTATGAT-GCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACACTGATCGCACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* * *
159341367 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAGTAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159341432 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159341469 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGA-TTCTCACCAA-GTCA-CCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159341530 CTAGTACTA-TCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT-CGGTGCATTAGTGC
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159341593 T-GTATGATCGCA-CCGTCAATTCTT-CTGCATTCTATTTATATAAAGGCTACCCCTTATCGCAC
130 TGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
*
159341655 TTGAG-CTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
*
159341719 GTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
*
159341757 AAATTAAATGAGATA-AAAA-TAGA-GGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159341818 TAGAACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
** *
159341883 TGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCAT-ATCGCA-T
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCC-TGATCGCACT
* **
159341946 ATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAGTG-TTTATTTCGTAAATAA
194 -TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
* *
159342010 CTAATTAGTTAAACGATGTGATAT-AAAAAATGGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159342047 AAATTAAATGAG--ATAAAA-TAG-GAGGGTGCAACACGAGGACTT-CTACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTAGAG-GGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159342106 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* *
159342171 T-GTATGATCGCA-CCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCACT
* **
159342234 TGAG--TCGAATTTCAATTTAAATACGAATAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159342297 TAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159342332 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCTA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159342396 TAGTACTACTCT-GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159342460 GGTATGATCGCACCCATCAATTCTTGCACATTGTATTTATGTAAAGGCTA-CCTGATCGCACTTG
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTTG
* * *
159342524 AGCCTCGAATTTGAATTTAAATACGACCAAATAGCATTTCGAGTGATTTA-TTCGTAAATTAGTA
196 AGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTA
159342588 ATTAGTTAAACGATGAGATATAAAAAAAATAGAAAA
261 ATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* *
159342624 AAATTAAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159342688 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* *
159342752 TGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159342817 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159342882 TAATTAGTTAAACGATGAGATATAAAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159342919 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159342982 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGAT-GGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * *
159343046 CTGGTATAATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
* *
159343111 TTGAGCGTCGAATTTCAATTTAAATACGA-CAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159343175 CTAATTAGTTAAACGATGAG--ATAAAAAAA-AGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159343210 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCA-CCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159343273 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * *
159343338 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCACACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* *
159343403 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159343468 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
*
159343504 AAATTAAATGAGATATAAAATTGGA-GGGTGCAACACGAGGACTT-CCACG-AGGTCA-CCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159343565 TAG-ACTACTCTCGCCCAAGCACGCATTAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTG
66 TAGTACTACTCTCGCCCAAGCACGC-TTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTG
* *
159343628 CTGGTATGATTGCA-CCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCAC
* * *
159343692 CTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
*
159343757 CTAATTAGTTAAACGATGAGATAT-AAAAAATGGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159343794 AAATTAAATGAGATATAAAA-TAGAGGGGTGCAACACGAGGATTTCTCAC-AA--TCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159343855 TAGTACTACTCTCGCCCAAGCATGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* *
159343920 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCTGATCGCACTTG
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTTG
* *
159343985 AGCGTCGAATTTCAATTTAAATACGA-CAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTA
196 AGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTA
*
159344049 ATTAGTTAAACGATGAG--ATAAAAAAATAGGAAA
261 ATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159344082 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGA-TTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159344145 TAGTACTACTCT--CCCAAGCACGCTTAACTGCAGAGTT-TGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159344207 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * * *
159344272 GAGCCTCGAATTTTAATTTAAATACGACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159344337 AATTAGTTAAACGATGAGATAT-AAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159344372 AAATTAAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTTCCCGCG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* **
159344436 TAGAACTACTCTCGCCCAAGCACGCTTAACTG-TAAGGTTCTGATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159344500 TGGTATGATTGC-CCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCAAACCCTGATCGCAC-
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGC-TACCCTGATCGCACT
* *
159344563 TGAGACTCGAATTTGAATTTAAATACGACCAAATA-CGTTTCGAGTGATTT-TTTTGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159344626 TAATTAGTTAAACGATGAGATAT-AAAAAATGGAAAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAAT--AGAAAA
* * *
159344664 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
* * * *
159344727 CTAGTACTAATCTCGTCCAAGCACGCTTAAATGC-GAGTTCTAATGGGATCCGGTGCATTAGTGC
65 CTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159344791 TGTTATGATCGCACTCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCAC-
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159344855 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159344920 TAATTAGTTAAACGATGAGATATAAAAAAA-AAAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159344956 AAATTAAATGAGATATAAAATAAGAGGGGTGCAACACGAGGATTTCTCACTAA-GTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159345020 TAGTACTACTCT-GCCCAAGCATGCTTAAACTGTGGAGTTCTGATGGGATCCGGTACATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
* * * *
159345084 TGGTATGATCGCACCCGTTAATTC-TGCGCATTCTATTCT-TCTAAAGGCTATCCCTGGTCGTAC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATT-TATGTAAAGGCTA-CCCTGATCGCAC
* * *
159345147 TTGAGCGTCGAATTTCAATTTAAA-ACGACCAAATAGTGTTTCGAGTGATTTATTTCGT-AATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159345210 CTAATTAGTTAAACGAT-AGATATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159345247 AAATTAAATGAGATATAAAA-TAGA-GGGTGCAATACGAGGACTTCTCA-GGAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159345309 TAGTACTACTCTAGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159345374 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * *
159345439 AAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159345504 AATTAGTTAAACGATGAGATATAAAAAAAGTAGAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAA-TAGAAAA
*
159345541 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159345605 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTTATGGGATCCGGTGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * * *
159345669 TGGTATGATTGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCACACC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
* *
159345734 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
159345799 TAATTAGTTAAACGATGAGATATAGAAAAAAATAGAAAA
259 TAATTAGTTAAACGATGAGATAT--AAAAAAATAGAAAA
* * * *
159345838 TAAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCAACCAT
1 -AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCAT
* *
159345901 CCTAGTACTAATCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCTGGTGCATTAGTG
64 CCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * * *
159345966 CTGTTATGATCGCACTCGTCAATTCTT-CTGCATTCTATTTATATAAAGGCTACCCCTTATCGCA
129 CTGGTATGATCGCACCCGTCAATTCTTGC-GCATTCTATTTATGTAAAGGCTA-CCCTGATCGCA
* * *
159346030 CTTGAGCTTCGAATTTGAATTTAAATACAACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATT
192 CTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATA
* *
159346095 AGTAATTAGTTAAACGATGAGATATAAAAAAAATCGAAAA
257 ACTAATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
*
159346135 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159346199 TAGAACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGTATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
** *
159346264 TGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCAT-ATCGCA-T
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCC-TGATCGCACT
* **
159346327 ATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCGAGTG-TCTTATTTCGTAAATA
194 -TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATA
* * * *
159346391 ACTAATTAGTTAAACGATGCGATATAAAAAACTGGCAAA
257 ACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * ** *
159346430 AAATTAAATGAGATGTAAAA-TAGGAAGGGTGCAACACGAGGACTTCTTACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
159346493 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * * *
159346558 CTAGTATGATCGCACTCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
* ** * ** *
159346623 CTGAGTGTCGAATTTCAATTTAAATACGAATAAATAGCGTTTCGAGTGATTTATTTCATAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159346688 CTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159346724 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCTA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159346788 TAGTACTACTCTTGCCCAAGCACGCTTAACTACGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * *
159346853 GGTATGATCGCACCCATCAATTCTTGCACATTGTATTTATGTAAAGGCTACCGCTGATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* * * *
159346918 GAGCCTCGAATTTGAATTTGAATACGACCAAATAGCATTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159346983 AATTAGTTAAACGATGAGATATAAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
* *
159347020 AAATTAAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTTCCCACG-AGGTCACCAATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* * *
159347084 TAGAACTACTCTCGCCCAAGCACGCTTAACTGC-AAGGTTCTGATGGGATCCGGAGCATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGC
* * *
159347148 TGGTATGATTGCACCCGTCAATTCTTGTGCATTCTATTTATATAAAGGCTAACCCTGATCGCACT
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCT-ACCCTGATCGCACT
*
159347213 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTAGAGTGATTTATTTCGTAAATAAC
194 TGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAAC
*
159347278 TAATTAGTTAAACGATGAGATATAAAAAAATGGAAAA
259 TAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * *
159347315 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGATTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
**
159347378 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATACGATCCGGTGCATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* * *
159347443 CTGGTATAATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
* * *
159347508 TTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159347573 CTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* * * *
159347609 AAAATAAATGAGATATAATATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159347673 TAGTACTACTCTCGCCCAAGAACGCTTAACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * **
159347738 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGAGAATCGCACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTG-ATCGCACTT
*** *
159347803 GAGCCTCGAATTTGAATTTAAATACGACCAAATAATATTTAGAGTGATTTATTTCGTAAATAACT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
*
159347868 AATTAGTTAAACGATGAGATATAAAAAAATGGAAAAA
260 AATTAGTTAAACGATGAGATATAAAAAAATAG-AAAA
* * * * * * *
159347905 AAATTAAATCAGATATAATA-TACA-GGGTGCAGCACGAGGACTTCTCACCAA-GTTACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
*
159347967 TAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGGATTAGTGC
66 TAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
** * * *
159348032 TGGTATGATCTTACCCGTCAATGCTTGCGCATTCTATTTATATAAAGGCAACCCCAT-ATCGCAC
130 TGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCC-TGATCGCAC
* * ** *
159348096 ATGAGCCTCGAATTTGAATTGAAATACGACCAAATAATGTTTCAAGTG-TCTTATTTCGTAAATA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATA
* *
159348160 ACAAATTAGTTAAAC---GAGATATAAAAAAATGGAAAA
257 ACTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159348196 AAATTAAATGAGATATAAAA-TAGGAGGGGTGCAACACGAGGACTTCTCACCAA-GTCACCCATC
1 AAATTAAATGAGATATAAAATTA-GAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATC
*
159348259 CTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGTATTAGTG
65 CTAGTACTACTCTCGCCCAAGCACGCTT-AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
* *
159348324 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCAC
129 CTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTA-CCCTGATCGCAC
* * * *
159348389 TTGAGCGTCGAATTTCAATTTAAATACGACAAAATAGCGTTTCAAGTGATTTATTTCGTAAATAA
193 TTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAA
159348454 CTAATTAGTTAAACGATGAGATA-AAAAAAA-AGAAAA
258 CTAATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
* *
159348490 AAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
* *
159348554 TAGTACTACTCTCGCCCAAGCACGCTTCACTGCGGAGTTCTGATGGGATCCGGAGCATTAGTGCT
66 TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
* * * * *
159348619 GGTATGATCGCACCCATCAATTCTTGCGCTTTGTATTTATGTAAAGGTTACCGCTGATCACACTT
131 GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACC-CTGATCGCACTT
* *
159348684 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGT
195 GAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACT
159348749 AATTAGTTAAACGATGAGATATAAAAAAAATAGAAAA
260 AATTAGTTAAACGATGAGATAT-AAAAAAATAGAAAA
*
159348786 AAATTAAATGAGATATAAAATTGGAGGGGTGC
1 AAATTAAATGAGATATAAAATTAGAGGGGTGC
159348818 TGTAACACCC
Statistics
Matches: 21365, Mismatches: 1635, Indels: 948
0.89 0.07 0.04
Matches are distributed among these distances:
283 23 0.00
284 50 0.00
285 108 0.01
286 137 0.01
287 305 0.01
288 578 0.03
289 1057 0.05
290 1548 0.07
291 2100 0.10
292 2127 0.10
293 3249 0.15
294 3234 0.15
295 2899 0.14
296 2775 0.13
297 659 0.03
298 512 0.02
299 4 0.00
ACGTcount: A:0.34, C:0.19, G:0.19, T:0.28
Consensus pattern (295 bp):
AAATTAAATGAGATATAAAATTAGAGGGGTGCAACACGAGGACTTCCCACGAAGGTCACCCATCC
TAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCT
GGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATGTAAAGGCTACCCTGATCGCACTTG
AGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTA
ATTAGTTAAACGATGAGATATAAAAAAATAGAAAA
Found at i:159333594 original size:17 final size:17
Alignment explanation
Indices: 159333551--159333595 Score: 55
Period size: 14 Copynumber: 2.9 Consensus size: 17
159333541 TAGTTAAACG
159333551 ATGAGATATAAAA--AA
1 ATGAGATATAAAATTAA
159333566 ATGA-A-A-AAAATTAA
1 ATGAGATATAAAATTAA
159333580 ATGAGATATAAAATTA
1 ATGAGATATAAAATTA
159333596 GAGGGGTGCA
Statistics
Matches: 25, Mismatches: 0, Indels: 8
0.76 0.00 0.24
Matches are distributed among these distances:
12 4 0.16
13 1 0.04
14 7 0.28
15 5 0.20
16 1 0.04
17 7 0.28
ACGTcount: A:0.64, C:0.00, G:0.11, T:0.24
Consensus pattern (17 bp):
ATGAGATATAAAATTAA
Found at i:159350221 original size:40 final size:40
Alignment explanation
Indices: 159350176--159350343 Score: 178
Period size: 40 Copynumber: 4.2 Consensus size: 40
159350166 CGGAATATAA
159350176 CCGGATATAATCACGT-GCACAAATGCCTTCGGGTCTTAGC
1 CCGGATATAATCAC-TAGCACAAATGCCTTCGGGTCTTAGC
* * * *
159350216 CCGGATAGAATAACTCGCACGAATGCCTTCGGGTCTTAGC
1 CCGGATATAATCACTAGCACAAATGCCTTCGGGTCTTAGC
** * *
159350256 CCGGATATAGCCACTAGCACAATTGCCTTCGGGTCTTAAC
1 CCGGATATAATCACTAGCACAAATGCCTTCGGGTCTTAGC
** * * * *
159350296 CCGGATATAATTTCCAGCATAATTGTCTTCGGGAT-TTAGC
1 CCGGATATAATCACTAGCACAAATGCCTTCGGG-TCTTAGC
159350336 CCGGATAT
1 CCGGATAT
159350344 CATTCAATTT
Statistics
Matches: 107, Mismatches: 19, Indels: 4
0.82 0.15 0.03
Matches are distributed among these distances:
39 1 0.01
40 105 0.98
41 1 0.01
ACGTcount: A:0.25, C:0.26, G:0.22, T:0.27
Consensus pattern (40 bp):
CCGGATATAATCACTAGCACAAATGCCTTCGGGTCTTAGC
Found at i:159353626 original size:294 final size:295
Alignment explanation
Indices: 159352028--159358401 Score: 9003
Period size: 295 Copynumber: 21.7 Consensus size: 295
159352018 GGCTGTCACA
* * * * * *
159352028 GGTGCAACACGAGGACTTCCCACGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCATA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* * *
159352093 ACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATTGCAACCGTCAATTCTTGC
66 ACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* *
159352157 GAATTCTATTTATATAAAGGCTAACCCTGATCGCAGC-TGAGCCTCGAATTTGAATTTAAATACG
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCA-CTTGAGCCTCGAATTTGAATTTAAATACG
* * * *
159352221 ACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAACTACTTAGTTAAATGATGAGATATAGAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATA-AA
159352286 AAAA-ATGAAAAAAAATTAAATGAGATATAAAATAGGAGG
258 AAAATA-G-AAAAAAATTAAATGAGATATAAAATAGGAGG
* ** *
159352325 GGTGCAACACGAAGTTTTCTCACCAAGTCACCCATCCTAGTACTAATCTCGCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* * * *
159352390 ACTGCAGAGTTCTGATGGGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGTG
66 ACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCG
* * *
159352455 CATTCTATTTATATAAAGGCTACCCCTTATTGCACTTGAGCTTCGAATTTGAATTTAAATACGAC
131 CATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGAC
* * *
159352520 CAAATAGCGTTTCGAGTGATTTATTTTGTAAATAACCAATTAGTTAAACGATTAGATATAAAAAA
196 CAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAA
* *
159352585 A-ATGGAAAAAATTAAATGAGATATAAAATA-CAGG
261 ATA-GAAAAAAATTAAATGAGATATAAAATAGGAGG
* *
159352619 GGTGCAACACGAGGACTTCTCACCAAGTGACCCATCCTAGTACTACTCTCGCCCAAGCAGGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
* ** *
159352684 AACTGCAGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCGTAAATTCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* *
159352749 GCATTCTATTTATATAAAGGCTACCCCAT-ATCGCACATGAGCCTCGAATTTGAATTGAAATACG
130 GCATTCTATTTATATAAAGGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
** *
159352813 ACCAAATAATGTTTCGAGTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGCGATATAAA
194 ACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAA
*
159352877 AAAATGGAAAAAAATTAAATGAGATATAAAATAGGAGG
258 AAAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
159352915 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
159352980 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* ** * * *
159353045 GCATTCTATTTTTGCAAAGGCTACCCCTGATCGTACTTGAGCGTCGAATTTCAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
159353110 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--AT-AAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
* * *
159353172 AATAAAAAAAAATTAAATGAGATATAAAATTGGACG
260 AATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* * *
159353208 GGTGCAACACGAGGACTTCCCA-GAAGGTCACCCATCCTAGTACTACTCTCACCCAAGCACGCTT
1 GGTGCAACACGAGGACTTCTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
* * * *
159353272 AACTGCGGAGTTCTGGTGGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTAC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* * * *
159353337 GCTTTGTATTTATGTAAAGGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
* * *
159353402 CCAAATAGCGTTTCTAGTGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGAGATAT-AAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
**
159353466 AATAGAAAAAAATTAAATGAGATATAAAATTCGAGG
260 AATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* * * * * * *
159353502 GGTGCAACACGAGGACTTCCCGCGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGATTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* *
159353567 ACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGTCAATTCTTGC
66 ACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* *
159353631 GCATTCTATTTATATAAAGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
* * *
159353696 CCAAATAACGTTTAGAGTGATTTATTTCGTAAATAACTAATTAGTTAAAGGATGAGATATAAAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAA
* ** *
159353761 AAATGGAAAAAAATTAAATGAGATATACTATA-CAGG
259 AAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* * *
159353797 GGTGCAACACGAGGACTTCTCACCAAGTGACCCATACTAGTACTACTCTCGCCCAAGCATGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
** ** *
159353862 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGGAGGTATGATCTTACCCGTCAATGCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* *
159353927 GCATTCTATTTATATAAAGGCTACCCCAT-ATCGCACATGAGCCTCGAATTTGAATTGAAATACG
130 GCATTCTATTTATATAAAGGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
** *
159353991 ACCAAATAATGTTTCAAGTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAA
194 ACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAA
* *
159354055 AAAATGGAAAAAAATTAAATGAGATATAAAGTAGGAGG
258 AAAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
*
159354093 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCTCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
*
159354158 AACTGCGGAGTTCTGCTGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* ** ** *
159354223 GCATTCTATTTTTGCAAAGGCTACCCCTGATCGCACTTGAGTGTCGAATTTCAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
*
159354288 -AAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
* *
159354350 AATAGAAAAAAATTAAATGAGATATAAAATTGGACG
260 AATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* *
159354386 GGTGCAACACGAGGACTT-TC-CAAAGGTCACCCATCCTAGTACAACTCTCGCCCAAGCACGCTT
1 GGTGCAACACGAGGACTTCTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
* * * * *
159354449 AACTACGGAGTTTTAATGGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCATCAATTCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* * * * * *
159354514 GCTTTGTATTTATGTAAAGGCTACCGCAGATCACACTTGAGCCTCGAATTTGAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
* * *
159354579 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGTAATTAGTTAAATGATGAGATATAAAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAA
*
159354644 AAATAG-AAAAAATTAAATGAGATATAAAATTGGAGG
259 AAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* * * * * * *
159354680 GGTGCAACACAAGGACTTCCCGCGAGGTCA-CCATTCCTAGAACTACTCTCGTCCAAGCACGCTT
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCA-TCCTAGTACTACTCTCGCCCAAGCACGCTT
* *
159354744 AACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATTGCA-CCGTCAATTCTTG
65 AACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
* * * *
159354807 CGCATTCTATTTACATAAAGGCTAACCCTGATTGCACCTGAGCCTCGAATTTGAATTTAAATACG
129 CGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* * * *
159354872 ACCAAATAACGTTTAGAGTGATTTATTTTGTAAATAACTAATTAGTTAAACGTTGAGATATAAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
*
159354937 AAATGGAAAAAAAATTAAATGAGATATAAAATAGGAGG
259 AAATAG-AAAAAAATTAAATGAGATATAAAATAGGAGG
* * * *
159354975 GCTGCAACACGAGTATTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGTCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* * *
159355040 ACTGC-GAGTTCTGATGGGATCCGGTGCATTAGTGCTGATATGATCGCACTCGTCAATTCTTGTG
66 ACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCG
* * * *
159355104 CATTTTATATATATAAAGGCTACCCCTTATCGCACTTGAGCCTTGAATTTGAATTTAAATACGAC
131 CATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGAC
* * * * *
159355169 CAAATAACGTTTCGAGTGATTGATTTCTTAAATAACCAATTAGTTAAACGATTAGATATAAAAAA
196 CAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAA
*
159355234 ATGGAAAAAAATTAAATGAGATATAAAATA-GAGG
261 ATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* *
159355268 GGTGCAACACGAGGTCTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGTCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
* * *
159355333 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGT
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* *
159355398 GCATTTTA-TTATATAAAGGCTACCCCTTATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
** *
159355462 CCAAATAATGTTTAGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
*
159355527 AATGGAAAAAAAATTAAATGAGATATAAAATAGGAGG
260 AATAG-AAAAAAATTAAATGAGATATAAAATAGGAGG
*
159355564 GGTGCAACACGAGGATTTCTCA-CAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
* *
159355628 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCACATCCGTCAATTCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* * *
159355693 GCATTCTATTT-T-TCAAAGGCTA-CCCTGATCGTACTTGAGCGTCGAATTTCAATTTAAATACG
130 GCATTCTATTTATAT-AAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* * * *
159355755 A-CAAATAGCGTTTCAAGTGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGACATATAAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
159355819 AAATAGAAAAAAATTAAATGAGATA-AAAATTA-GAGG
259 AAATAGAAAAAAATTAAATGAGATATAAAA-TAGGAGG
* * * * *
159355855 GGTACAACACGAGGACTTCCCA-CAAGGTCACCAATCCTAGAACTACTCTCGCCCATGCACGCTT
1 GGTGCAACACGAGGACTTCTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
* * * * *
159355919 AACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGGTGGGATGATTGCACCTGTCAATTCTTG
65 AACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
* * *
159355983 CGCATTCTATTTGTATAAAGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAATTTAAATACG
129 CGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* * * * * *
159356048 ACCAAATAACGTTTAGAGTGATTGATTTCGTAAATAAATAATTAGTTAAACAATGACATATAGAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATA-AA
*
159356113 AAAATGGAAAAAAATTAAATGAGATATAAAATAGGAGG
258 AAAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
*
159356151 GGTGCAACACGAGGATTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* * *
159356216 ACTGCGGAGTTCTGATCGGAGCCGGTGCATTAGTGCTGGTATGATTC-CACCCTTCAATTCTTGC
66 ACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA-TCGCACCCGTCAATTCTTGC
* * *
159356280 GCATTCTATTTATATAAAGGCTAACCCTGATCGCACCTGAGCCTCAAATTTGAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
* * *
159356345 CCAAATAACGTTTAGAGTGATTTATTTCGTAAATAACTACTTAGTTAAACGATGAGATATAGAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATA-AAA
** * *
159356410 AAACGGAAAAAAAATTAAGTGAGATATAAAATACGAGG
259 AAATAG-AAAAAAATTAAATGAGATATAAAATAGGAGG
* *
159356448 GGTGCAACACGAGGATTTCTCACCAAGTCACCCATCCTAGTACTAATCTCGCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* * *
159356513 ACAGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGTC
66 ACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG-C
* * * *
159356578 -CATTCTATTTATATAAAGCCTACCCCTTATCGCAATTGAGCTTCGAATTTGAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
* *
159356642 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAAT-ACCAATTAGTTAAACGATTAGATATAAAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
* *
159356706 AATGGAAAAAACATTAAATGAGCTATAAAATA-GAGG
260 AATAGAAAAAA-ATTAAATGAGATATAAAATAGGAGG
*
159356742 GGTGCAACACGAGGACTTCTCACCAAGTGACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
* * * ** *
159356807 AACTGCGGAGTTTTGATGGGAGCCGGTGCATTAGTGCTGGTACGATCTTACCCGTCAATGCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* * *
159356872 GCATTCTATTTATATAAAGGCTACCCCAT-ATCGCACATGAGCCTCAAATTTGAATTGAAATACG
130 GCATTCTATTTATATAAAGGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* *
159356936 ACCAAATAG-GTTTCGAGTG-TCTTATTTCGTAAATAACTAATTAGTTAAATGATGCGATAT-AA
194 ACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAA
* *
159356998 AAAATGGAAAAAAATTAAATCAGATATAAAATAGGAGG
258 AAAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* *
159357036 GGTGCAACACGAGGACTTCTGACCAAGTCACCCATCCTAGTACTACTCTCGCCCAACCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
* * * * *
159357101 AACTGCGGAGTTCTGATGTGATCCAGTGCATTACTGCTGGTATGATCACACCTGTCAATTCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* ** * *
159357166 GCATTCTATTTTTGCAAAGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTTAAATACGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
*
159357231 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTTATTAGTTAAACGATGAG---TAAAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
* * * *
159357293 AATAGAAAAAAATGAATTGAGATATAAAATTGGACG
260 AATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* *
159357329 GGTGCAACACGAGGACTTC-CTA-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCT
1 GGTGCAACACGAGGACTTCTC-ACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCT
** * *
159357392 TAACTGCGGAGTTCTGATGGGATCCGAAGCATTAGTGCTGGTATGATTGCACCCATCAATTCTTG
64 TAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
* * * *
159357457 CGCATTGTATTTATGTAAAGGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAACACG
129 CGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* * * *
159357522 GCCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGTAATTTGTTAAACGATGAGATATAAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
*
159357587 AAATAGAAAAAAATTAAATGAGATATAAAATTGGAGG
259 AAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* * * * *
159357624 GGTGCAACACGAGGACTTCCCACGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* * **
159357689 ACTGC-AAGGTTCTGATGGGATCTGGTGCATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGC
66 ACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* * *
159357753 GCATTCTATTTATATAAAGGCTACCCCAT-ATCGCACTTAAGCCTCGAATTTGAATTGAAATACA
130 GCATTCTATTTATATAAAGGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
** * *
159357817 ACCAAATAAAGTTTCGAGTG-TTTATTTCATAAATAACTAATTAGTTAAACAATGAGATATAAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
*
159357881 AAAT-GGAAAAAATTAAATGAGATATAAAATAGGAGG
259 AAATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
*
159357917 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACACTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-
* * *
159357982 AACTACGGCGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCAGTCAATTCTTGC
65 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* * * * * *
159358047 GCATTCTATTTTTGTAAAGGCTACCCCTGATCGCACTTGAGCGTCGACTTTCAATTTAAATAGGA
130 GCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGA
* * * *
159358112 CCAAATAGCATTTCGTGTGGTTTATTTCGTAAATAACTAATTAGTTAAACGATGGGATATAAAAA
195 CCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAA
* *
159358177 AATTGAAAAAAATTAAATGAGATATAAAATTGGAGG
260 AATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
* * ** * *
159358213 GGTGTAACACGAGGACTTCCCAGGAGGTCACCCAT-CTAGTACTACTCTCGCCC-AGCA-TCTTA
1 GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
* * * ** *
159358275 ACTACGGAGTTCTGATGGGATCCGGAGCATTAGCGCTATTATGATCGCACCCATCAATTCTTGCG
66 ACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCG
* * *
159358340 CATTGTATTTATGTAAAGGCTACCGCTGATCGC-CTTTGAGCCTCGAATTTGAATTTAAATAC
131 CATTCTATTTATATAAAGGCTACCCCTGATCGCAC-TTGAGCCTCGAATTTGAATTTAAATAC
159358402 NNNNNNNNNN
Statistics
Matches: 5460, Mismatches: 533, Indels: 173
0.89 0.09 0.03
Matches are distributed among these distances:
290 1 0.00
291 215 0.04
292 607 0.11
293 526 0.10
294 1249 0.23
295 1404 0.26
296 989 0.18
297 467 0.09
298 2 0.00
ACGTcount: A:0.33, C:0.20, G:0.19, T:0.28
Consensus pattern (295 bp):
GGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTA
ACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCG
CATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGAC
CAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAA
ATAGAAAAAAATTAAATGAGATATAAAATAGGAGG
Found at i:159357555 original size:881 final size:880
Alignment explanation
Indices: 159352028--159358401 Score: 8841
Period size: 881 Copynumber: 7.2 Consensus size: 880
159352018 GGCTGTCACA
* * * * *
159352028 GGTGCAACACGAGGACTTCC-CACGAGGTCACCAATCCTAGAACTACTCTCGCCCAAGCACGCAT
1 GGTGCAACACGAGGACTTCCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
* * *
159352092 AACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATTGCAACCGTCAATTCTTG
66 AACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
*
159352156 CGAATTCTATTTATATAAAGGCTAACCCTGATCGCAGC-TGAGCCTCGAATTTGAATTTAAATAC
130 CGCATTCTATTTATATAAAGGCT-ACCCTGATCGCA-CTTGAGCCTCGAATTTGAATTTAAATAC
* * * *
159352220 GACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAACTACTTAGTTAAATGATGAGATATAGA
193 GACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAT--A
* * **
159352285 AAAAAATGAAAAAAAATTAAATGAGATATAAAATAGGAGGGGTGCAACACGAAGTTTTCTCACCA
256 AAAAAATGGAAAAAAATTAAATGAGATATAAAATA-GAGGGGTGCAACACGAGGACTTCTCACCA
*
159352350 AGTCACCCATCCTAGTACTAATCTCGCCCAAGCACGCTTAACTGCAGAGTTCTGATGGGATCCGG
320 AGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGG
* * *
159352415 TGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGTGCATTCTATTTATATAAAGGCTACCC
384 TGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCC
* *
159352480 CTTATTGCACTTGAGCTTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCGAGTGATTTATT
449 C-TATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAG-GTTTCGAGTGATTTATT
* * *
159352545 TTGTAAATAACCAATTAGTTAAACGATTAGATATAAAAAAAATGG-AAAAAATTAAATGAGATAT
512 TCGTAAATAACTAATTAGTTAAACGATGAGATAT-AAAAAAATGGAAAAAAATTAAATGAGATAT
* *
159352609 AAAATA-CAGGGGTGCAACACGAGGACTTCTCACCAAGTGACCCATCCTAGTACTACTCTCGCCC
576 AAAATAGGAGGGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCC
* * **
159352673 AAGCAGGCTTAAACTGCAGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCTTACCCG
641 AAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCG
* *
159352738 TAAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCAT-ATCGCACATGAGCCTCGAATTTGA
706 TCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCC-TGATCGCACTTGAGCCTCGAATTTGA
* *
159352802 ATTGAAATACGACCAAATAATGTTTCGAGTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGA
770 ATTTAAATACGACCAAATAACGTTTCGAGTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGA
* * *
159352866 TGCGATATAAAAAAATGGAAAAAAATTAAATGAGATATAAAATAGGAGG
834 T--GAGATAAAAAAATAGAAAAAAATTAAATGAGATATAAAATTGGAGG
159352915 GGTGCAACACGAGGACTT-CTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
1 GGTGCAACACGAGGACTTCCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
159352979 AAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
66 -AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
* ** * * *
159353044 CGCATTCTATTTTTGCAAAGGCTACCCCTGATCGTACTTGAGCGTCGAATTTCAATTTAAATACG
130 CGCATTCTATTTATATAAAGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
159353109 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATA-AAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
* * * *
159353173 ATAA---AAAAAAATTAAATGAGATATAAAATTGGACGGGTGCAACACGAGGACTTCCCA-GAAG
259 A-AATGGAAAAAAATTAAATGAGATATAAAA-TAGAGGGGTGCAACACGAGGACTTCTCACCAA-
* * *
159353234 GTCACCCATCCTAGTACTACTCTCACCCAAGCACGCTTAACTGCGGAGTTCTGGTGGGATCCGGA
321 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGT
* * * * * *
159353299 GCATTAGTGCTGGTATGATCGCACCCATCAATTCTTACGCTTTGTATTTATGTAAAGGCTACCGC
385 GCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCC
*
159353364 TGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGCGTTTCTAGTGATTTATTT
450 T-ATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAG-GTTTCGAGTGATTTATTT
* * *
159353429 CGTAAATTAGTAATTAGTTAAACGATGAGATAT-AAAAAATAGAAAAAAATTAAATGAGATATAA
513 CGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAATGAGATATAA
** * * * * * *
159353493 AATTCGAGGGGTGCAACACGAGGACTTCCCGCGAGGTCACCAATCCTAGAACTACTCTCGCCCAA
578 AATAGGAGGGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAA
* * *
159353558 GCACGATT-AACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATTGCACCCGT
643 GCACGCTTAAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
* *
159353621 CAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACCTGAGCCTCGAATTTGAAT
707 CAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAAT
* *
159353686 TTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAACTAATTAGTTAAAGGATGA
772 TTAAATACGACCAAATAACGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGA
* ** **
159353751 GATATAAAAAAAATGGAAAAAAATTAAATGAGATATACTA-TACAGG
837 G--AT-AAAAAAATAGAAAAAAATTAAATGAGATATAAAATTGGAGG
* * *
159353797 GGTGCAACACGAGGACTT-CTCACCAAGTGACCCATACTAGTACTACTCTCGCCCAAGCATGCTT
1 GGTGCAACACGAGGACTTCCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
** ** *
159353861 AAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGGAGGTATGATCTTACCCGTCAATGCTTG
66 -AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
* *
159353926 CGCATTCTATTTATATAAAGGCTACCCCAT-ATCGCACATGAGCCTCGAATTTGAATTGAAATAC
130 CGCATTCTATTTATATAAAGGCTA-CCC-TGATCGCACTTGAGCCTCGAATTTGAATTTAAATAC
** *
159353990 GACCAAATAATGTTTCAAGTG-TCTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAA
193 GACCAAATAGCGTTTCGAGTGAT-TTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAA
*
159354054 AAAAATGGAAAAAAATTAAATGAGATATAAAGTAGGAGGGGTGCAACACGAGGACTTCTCACCAA
257 AAAAATGGAAAAAAATTAAATGAGATATAAAATA-GAGGGGTGCAACACGAGGACTTCTCACCAA
* *
159354119 GTCACCCATCCTAGTACTACTCTCTCCCAAGCACGCTTAAACTGCGGAGTTCTGCTGGGATCCGG
321 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGC-GAGTTCTGATGGGATCCGG
* **
159354184 TGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTTTGCAAAGGCTACCC
384 TGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCC
** * *
159354249 CTGATCGCACTTGAGTGTCGAATTTCAATTTAAATACGA-AAAATAGCGTTTCGAGTGATTTATT
449 CT-ATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAG-GTTTCGAGTGATTTATT
*
159354313 TCGTAAATAACTAATTAGTTAAACGATGAG--ATAAAAAAATAGAAAAAAATTAAATGAGATATA
512 TCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAATGAGATATA
* * * *
159354376 AAATTGGACGGGTGCAACACGAGGACTT-TC-CAAAGGTCACCCATCCTAGTACAACTCTCGCCC
577 AAATAGGAGGGGTGCAACACGAGGACTTCTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCC
* * * * *
159354439 AAGCACGCTT-AACTACGGAGTTTTAATGGGATCCGGAGCATTAGTGCTGGTATGATCGCACCCA
641 AAGCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCG
* * * * * *
159354503 TCAATTCTTGCGCTTTGTATTTATGTAAAGGCTACCGCAGATCACACTTGAGCCTCGAATTTGAA
706 TCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAA
* * * *
159354568 TTTAAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGTAATTAGTTAAATGATG
771 TTTAAATACGACCAAATAACGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATG
159354633 AGATATAAAAAAAATAG-AAAAAATTAAATGAGATATAAAATTGGAGG
836 AG--AT-AAAAAAATAGAAAAAAATTAAATGAGATATAAAATTGGAGG
* * * * * *
159354680 GGTGCAACACAAGGACTTCC-CGCGAGGTCA-CCATTCCTAGAACTACTCTCGTCCAAGCACGCT
1 GGTGCAACACGAGGACTTCCTCACCAAGTCACCCA-TCCTAGTACTACTCTCGCCCAAGCACGCT
* *
159354743 TAACTGC-AAGGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATTGCA-CCGTCAATTCTT
65 TAACTGCGGA-GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTT
* * *
159354806 GCGCATTCTATTTACATAAAGGCTAACCCTGATTGCACCTGAGCCTCGAATTTGAATTTAAATAC
129 GCGCATTCTATTTATATAAAGGCT-ACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATAC
* * * *
159354871 GACCAAATAACGTTTAGAGTGATTTATTTTGTAAATAACTAATTAGTTAAACGTTGAGATATAAA
193 GACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAA
* * *
159354936 AAAATGGAAAAAAAATTAAATGAGATATAAAATAGGAGGGCTGCAACACGAGTATTTCTCACCAA
258 AAAATGG-AAAAAAATTAAATGAGATATAAAATA-GAGGGGTGCAACACGAGGACTTCTCACCAA
*
159355001 GTCACCCATCCTAGTACTACTCTCGTCCAAGCACGCTTAACTGCGAGTTCTGATGGGATCCGGTG
321 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGAGTTCTGATGGGATCCGGTG
* * * * *
159355066 CATTAGTGCTGATATGATCGCACTCGTCAATTCTTGTGCATTTTATATATATAAAGGCTACCCCT
386 CATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCC-
* * *
159355131 TATCGCACTTGAGCCTTGAATTTGAATTTAAATACGACCAAATAACGTTTCGAGTGATTGATTTC
450 TATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAAT-AGGTTTCGAGTGATTTATTTC
* * *
159355196 TTAAATAACCAATTAGTTAAACGATTAGATATAAAAAAATGGAAAAAAATTAAATGAGATATAAA
514 GTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAATGAGATATAAA
* *
159355261 ATA-GAGGGGTGCAACACGAGGTCTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGTCCAAG
579 ATAGGAGGGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAG
* *
159355325 CACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCA
644 CACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCA
* * *
159355390 ATTCTTGTGCATTTTA-TTATATAAAGGCTACCCCTTATCGCACTTGAGCCTCGAATTTGAATTT
709 ATTCTTGCGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTT
* *
159355454 AAATACGACCAAATAATGTTTAGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGA
774 AAATACGACCAAATAACGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAG-
* *
159355519 TATAAAAAAATGGAAAAAAAATTAAATGAGATATAAAATAGGAGG
838 -ATAAAAAAATAG-AAAAAAATTAAATGAGATATAAAATTGGAGG
*
159355564 GGTGCAACACGAGGA-TTTCTCA-CAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
1 GGTGCAACACGAGGACTTCCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
* *
159355627 AAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCACATCCGTCAATTCTTG
66 -AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
* * *
159355692 CGCATTCTATTT-T-TCAAAGGCTACCCTGATCGTACTTGAGCGTCGAATTTCAATTTAAATACG
130 CGCATTCTATTTATAT-AAAGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* * * *
159355755 A-CAAATAGCGTTTCAAGTGATTTATTTCGTAAATTAGTAATTAGTTAAACGATGACATATAAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
* * *
159355819 AAATAGAAAAAAATTAAATGAGATA-AAAATTAGAGGGGTACAACACGAGGACTTCCCA-CAAGG
259 AAATGGAAAAAAATTAAATGAGATATAAAA-TAGAGGGGTGCAACACGAGGACTTCTCACCAA-G
* * * *
159355882 TCACCAATCCTAGAACTACTCTCGCCCATGCACGCTTAACTGCAAGGTTCTGATGGGATCCGGTG
322 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGA-GTTCTGATGGGATCCGGTG
* * * * * *
159355947 CATTAGTGGTGGGATGATTGCACCTGTCAATTCTTGCGCATTCTATTTGTATAAAGGCTAACCCT
386 CATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCT
* * * *
159356012 GATCGCACCTGAGCCTCGAATTTGAATTTAAATACGACCAAATAACGTTTAGAGTGATTGATTTC
451 -ATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAAT-AGGTTTCGAGTGATTTATTTC
* * *
159356077 GTAAATAAATAATTAGTTAAACAATGACATATAGAAAAAATGGAAAAAAATTAAATGAGATATAA
514 GTAAATAACTAATTAGTTAAACGATGAGATATA-AAAAAATGGAAAAAAATTAAATGAGATATAA
*
159356142 AATAGGAGGGGTGCAACACGAGGATTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAA
578 AATAGGAGGGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAA
* * *
159356207 GCACGCTT-AACTGCGGAGTTCTGATCGGAGCCGGTGCATTAGTGCTGGTATGATTC-CACCCTT
643 GCACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA-TCGCACCCGT
* * *
159356270 CAATTCTTGCGCATTCTATTTATATAAAGGCTAACCCTGATCGCACCTGAGCCTCAAATTTGAAT
707 CAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAAT
* *
159356335 TTAAATACGACCAAATAACGTTTAGAGTGATTTATTTCGTAAATAACTACTTAGTTAAACGATGA
772 TTAAATACGACCAAATAACGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGA
* **
159356400 GATATAGAAAAA-ACGGAAAAAAAATTAAGTGAGATATAAAATACGAGG
837 GATA-A-AAAAATA--G-AAAAAAATTAAATGAGATATAAAATTGGAGG
* *
159356448 GGTGCAACACGAGGA-TTTCTCACCAAGTCACCCATCCTAGTACTAATCTCGCCCAAGCACGCTT
1 GGTGCAACACGAGGACTTCCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
* * *
159356512 AACAGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGTTATGATCGCACTCGTCAATTCTTGT
66 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG-
* * * *
159356577 C-CATTCTATTTATATAAAGCCTACCCCTTATCGCAATTGAGCTTCGAATTTGAATTTAAATACG
130 CGCATTCTATTTATATAAAGGCTA-CCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* *
159356641 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAAT-ACCAATTAGTTAAACGATTAGATATAAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
*
159356705 AAATGGAAAAAACATTAAATGAGCTATAAAATAGAGGGGTGCAACACGAGGACTTCTCACCAAGT
259 AAATGGAAAAAA-ATTAAATGAGATATAAAATAGAGGGGTGCAACACGAGGACTTCTCACCAAGT
* * *
159356770 GACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAAACTGCGGAGTTTTGATGGGAGCCGGTG
323 CACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-AACTGC-GAGTTCTGATGGGATCCGGTG
* ** *
159356835 CATTAGTGCTGGTACGATCTTACCCGTCAATGCTTGCGCATTCTATTTATATAAAGGCTACCCCA
386 CATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCC-
* * *
159356900 TATCGCACATGAGCCTCAAATTTGAATTGAAATACGACCAAATAGGTTTCGAGTG-TCTTATTTC
450 TATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGGTTTCGAGTGAT-TTATTTC
* * *
159356964 GTAAATAACTAATTAGTTAAATGATGCGATAT-AAAAAATGGAAAAAAATTAAATCAGATATAAA
514 GTAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAATGAGATATAAA
* *
159357028 ATAGGAGGGGTGCAACACGAGGACTTCTGACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAC
579 ATAGGAGGGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAG
* * * * *
159357093 CACGCTTAAACTGCGGAGTTCTGATGTGATCCAGTGCATTACTGCTGGTATGATCACACCTGTCA
644 CACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCA
* ** * *
159357158 ATTCTTGCGCATTCTATTTTTGCAAAGGCTACCCCTGATCGCACTTGAGCGTCGAATTTCAATTT
709 ATTCTTGCGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTT
* *
159357223 AAATACGACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTTATTAGTTAAACGATGAG-
774 AAATACGACCAAATAACGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGA
* * *
159357287 TAAAAAAATAGAAAAAAATGAATTGAGATATAAAATTGGACG
839 TAAAAAAATAGAAAAAAATTAAATGAGATATAAAATTGGAGG
* *
159357329 GGTGCAACACGAGGACTTCCT-A-GAAGGTCACCCATCCTAGTACTACTCTTGCCCAAGCACGCT
1 GGTGCAACACGAGGACTTCCTCACCAA-GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCT
** * *
159357392 TAACTGCGGAGTTCTGATGGGATCCGAAGCATTAGTGCTGGTATGATTGCACCCATCAATTCTTG
65 TAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
* * *
159357457 CGCATTGTATTTATGTAAAGGCTACCGCTGATCGCACTTGAGCCTCGAATTTGAATTTAAACACG
130 CGCATTCTATTTATATAAAGGCTACC-CTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
* * * *
159357522 GCCAAATAGCGTTTCGAGTGATTTATTTCGTAAATTAGTAATTTGTTAAACGATGAGATATAAAA
194 ACCAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAA
* * * * *
159357587 AAATAGAAAAAAATTAAATGAGATATAAAATTGGAGGGGTGCAACACGAGGACTTCCCACGAGGT
259 AAATGGAAAAAAATTAAATGAGATATAAAA-TAGAGGGGTGCAACACGAGGACTTCTCACCAAGT
* * * *
159357652 CACCAATCCTAGAACTACTCTCGCCCAAGCACGCTTAACTGCAAGGTTCTGATGGGATCTGGTGC
323 CACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGA-GTTCTGATGGGATCCGGTGC
**
159357717 ATTAGTGCTGGTATGATCTTACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCAT
387 ATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCC-T
* * * * *
159357782 ATCGCACTTAAGCCTCGAATTTGAATTGAAATACAACCAAATAAAGTTTCGAGTG-TTTATTTCA
451 ATCGCACTTGAGCCTCGAATTTGAATTTAAATACGACCAAAT-AGGTTTCGAGTGATTTATTTCG
*
159357846 TAAATAACTAATTAGTTAAACAATGAGATATAAAAAAATGG-AAAAAATTAAATGAGATATAAAA
515 TAAATAACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAATGAGATATAAAA
159357910 TAGGAGGGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGC
580 TAGGAGGGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGC
* * * *
159357975 ACACTTAAACTACGGCGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCAGTCAA
645 ACGCTTAAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAA
* * * * *
159358040 TTCTTGCGCATTCTATTTTTGTAAAGGCTACCCCTGATCGCACTTGAGCGTCGACTTTCAATTTA
710 TTCTTGCGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTA
* * * * * *
159358105 AATAGGACCAAATAGCATTTCGTGTGGTTTATTTCGTAAATAACTAATTAGTTAAACGATGGGAT
775 AATACGACCAAATAACGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGAT--GAG
*
159358170 ATAAAAAAATTGAAAAAAATTAAATGAGATATAAAATTGGAGG
838 ATAAAAAAATAGAAAAAAATTAAATGAGATATAAAATTGGAGG
* ** * *
159358213 GGTGTAACACGAGGACTTCC-CAGGAGGTCACCCAT-CTAGTACTACTCTCGCCC-AGCA-TCTT
1 GGTGCAACACGAGGACTTCCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
* * * ** *
159358274 AACTACGGAGTTCTGATGGGATCCGGAGCATTAGCGCTATTATGATCGCACCCATCAATTCTTGC
66 AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
* *
159358339 GCATTGTATTTATGTAAAGGCTACCGCTGATCGC-CTTTGAGCCTCGAATTTGAATTTAAATAC
131 GCATTCTATTTATATAAAGGCTACC-CTGATCGCAC-TTGAGCCTCGAATTTGAATTTAAATAC
159358402 NNNNNNNNNN
Statistics
Matches: 4927, Mismatches: 464, Indels: 198
0.88 0.08 0.04
Matches are distributed among these distances:
879 3 0.00
880 185 0.04
881 1163 0.24
882 908 0.18
883 1069 0.22
884 416 0.08
885 321 0.07
886 361 0.07
887 206 0.04
888 292 0.06
889 3 0.00
ACGTcount: A:0.33, C:0.20, G:0.19, T:0.28
Consensus pattern (880 bp):
GGTGCAACACGAGGACTTCCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
AACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTGC
GCATTCTATTTATATAAAGGCTACCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACGAC
CAAATAGCGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATATAAAAAA
ATGGAAAAAAATTAAATGAGATATAAAATAGAGGGGTGCAACACGAGGACTTCTCACCAAGTCAC
CCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGAGTTCTGATGGGATCCGGTGCATTA
GTGCTGGTATGATCGCACCCGTCAATTCTTGCGCATTCTATTTATATAAAGGCTACCCCTATCGC
ACTTGAGCCTCGAATTTGAATTTAAATACGACCAAATAGGTTTCGAGTGATTTATTTCGTAAATA
ACTAATTAGTTAAACGATGAGATATAAAAAAATGGAAAAAAATTAAATGAGATATAAAATAGGAG
GGGTGCAACACGAGGACTTCTCACCAAGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT
AAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAATTCTTG
CGCATTCTATTTATATAAAGGCTACCCCTGATCGCACTTGAGCCTCGAATTTGAATTTAAATACG
ACCAAATAACGTTTCGAGTGATTTATTTCGTAAATAACTAATTAGTTAAACGATGAGATAAAAAA
ATAGAAAAAAATTAAATGAGATATAAAATTGGAGG
Found at i:159360501 original size:32 final size:34
Alignment explanation
Indices: 159360465--159360529 Score: 89
Period size: 34 Copynumber: 2.0 Consensus size: 34
159360455 TAACAGTGGT
*
159360465 ACTGGGCCAGAG-CCCTT-TTCAGATTACAATAA
1 ACTGGGCCAGAGCCCCTTATTCAGATAACAATAA
**
159360497 ACTGGGCCTTAGCCCCTTATTCAGATAACAATA
1 ACTGGGCCAGAGCCCCTTATTCAGATAACAATA
159360530 TGGCCCATAG
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
32 10 0.36
33 5 0.18
34 13 0.46
ACGTcount: A:0.31, C:0.26, G:0.17, T:0.26
Consensus pattern (34 bp):
ACTGGGCCAGAGCCCCTTATTCAGATAACAATAA
Found at i:159362408 original size:32 final size:32
Alignment explanation
Indices: 159362371--159362467 Score: 185
Period size: 32 Copynumber: 3.0 Consensus size: 32
159362361 AATGCTTATC
159362371 ATGCCCATCATCCATTAACTATTAAAATGCTA
1 ATGCCCATCATCCATTAACTATTAAAATGCTA
*
159362403 ATGCCCATCATTCATTAACTATTAAAATGCTA
1 ATGCCCATCATCCATTAACTATTAAAATGCTA
159362435 ATGCCCATCATCCATTAACTATTAAAATGCTA
1 ATGCCCATCATCCATTAACTATTAAAATGCTA
159362467 A
1 A
159362468 AATGCATACA
Statistics
Matches: 63, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 63 1.00
ACGTcount: A:0.38, C:0.24, G:0.06, T:0.32
Consensus pattern (32 bp):
ATGCCCATCATCCATTAACTATTAAAATGCTA
Found at i:159368977 original size:25 final size:25
Alignment explanation
Indices: 159368949--159368996 Score: 71
Period size: 25 Copynumber: 1.9 Consensus size: 25
159368939 AAAGCTTAAT
*
159368949 TAATTTAACTTAA-TTAATCTAATTA
1 TAATTTAA-TTAACTTAAACTAATTA
159368974 TAATTTAATTAACTTAAACTAAT
1 TAATTTAATTAACTTAAACTAAT
159368997 CATTAATCCT
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
24 4 0.19
25 17 0.81
ACGTcount: A:0.46, C:0.08, G:0.00, T:0.46
Consensus pattern (25 bp):
TAATTTAATTAACTTAAACTAATTA
Found at i:159374098 original size:21 final size:21
Alignment explanation
Indices: 159374074--159374114 Score: 64
Period size: 21 Copynumber: 2.0 Consensus size: 21
159374064 ATCTGCTCAA
* *
159374074 ACTCCACCTGTTTTGGAGTAC
1 ACTCCACCTGCTGTGGAGTAC
159374095 ACTCCACCTGCTGTGGAGTA
1 ACTCCACCTGCTGTGGAGTA
159374115 TCGCTCGTCT
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
21 18 1.00
ACGTcount: A:0.20, C:0.29, G:0.22, T:0.29
Consensus pattern (21 bp):
ACTCCACCTGCTGTGGAGTAC
Found at i:159381956 original size:84 final size:84
Alignment explanation
Indices: 159381854--159382022 Score: 320
Period size: 84 Copynumber: 2.0 Consensus size: 84
159381844 CTTTTAAACT
159381854 CTATTTTTGTTCTAAGTCAAATTAGATTTTATTAAAAACAAATGTTGCAGAGAATCACATGTCCA
1 CTATTTTTGTTCTAAGTCAAATTAGATTTTATTAAAAACAAATGTTGCAGAGAATCACATGTCCA
*
159381919 TAATCAGCCTTCCCAAATA
66 TAATCAGCCTACCCAAATA
*
159381938 CTATTTTTGTTCTCAGTCAAATTAGATTTTATTAAAAACAAATGTTGCAGAGAATCACATGTCCA
1 CTATTTTTGTTCTAAGTCAAATTAGATTTTATTAAAAACAAATGTTGCAGAGAATCACATGTCCA
159382003 TAATCAGCCTACCCAAATA
66 TAATCAGCCTACCCAAATA
159382022 C
1 C
159382023 AGTAAACAAA
Statistics
Matches: 83, Mismatches: 2, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
84 83 1.00
ACGTcount: A:0.37, C:0.19, G:0.11, T:0.34
Consensus pattern (84 bp):
CTATTTTTGTTCTAAGTCAAATTAGATTTTATTAAAAACAAATGTTGCAGAGAATCACATGTCCA
TAATCAGCCTACCCAAATA
Found at i:159384321 original size:30 final size:31
Alignment explanation
Indices: 159384273--159384332 Score: 86
Period size: 30 Copynumber: 2.0 Consensus size: 31
159384263 AATTTACCAT
*
159384273 TATATTAACTTGAAATTTTACAATTTTAAAA
1 TATATTAACTTAAAATTTTACAATTTTAAAA
* *
159384304 TATATTAA-TTAAAATTTTTCTATTTTAAA
1 TATATTAACTTAAAATTTTACAATTTTAAA
159384333 GAGATAGAAT
Statistics
Matches: 26, Mismatches: 3, Indels: 1
0.87 0.10 0.03
Matches are distributed among these distances:
30 18 0.69
31 8 0.31
ACGTcount: A:0.43, C:0.05, G:0.02, T:0.50
Consensus pattern (31 bp):
TATATTAACTTAAAATTTTACAATTTTAAAA
Found at i:159388244 original size:24 final size:22
Alignment explanation
Indices: 159388196--159388249 Score: 67
Period size: 21 Copynumber: 2.4 Consensus size: 22
159388186 ACACATATGT
159388196 ATAATAAT-GATGAAAATAATA
1 ATAATAATAGATGAAAATAATA
159388217 ATAATAATAG-TGAAAATAAATAA
1 ATAATAATAGATGAAAAT-AAT-A
159388240 GATAATAATA
1 -ATAATAATA
159388250 AATATAATAG
Statistics
Matches: 29, Mismatches: 0, Indels: 5
0.85 0.00 0.15
Matches are distributed among these distances:
21 15 0.52
22 4 0.14
23 1 0.03
24 9 0.31
ACGTcount: A:0.63, C:0.00, G:0.09, T:0.28
Consensus pattern (22 bp):
ATAATAATAGATGAAAATAATA
Found at i:159388422 original size:24 final size:22
Alignment explanation
Indices: 159388364--159388422 Score: 66
Period size: 24 Copynumber: 2.5 Consensus size: 22
159388354 TACGAAGAAG
159388364 TATATATAATATAATAATAATAT
1 TATATATAA-ATAATAATAATAT
*
159388387 TA-AAATACAATAATTAAATAATAT
1 TATATATA-AATAA-T-AATAATAT
159388411 TATATATAAATA
1 TATATATAAATA
159388423 TATACAATAT
Statistics
Matches: 30, Mismatches: 2, Indels: 7
0.77 0.05 0.18
Matches are distributed among these distances:
22 8 0.27
23 4 0.13
24 14 0.47
25 4 0.13
ACGTcount: A:0.59, C:0.02, G:0.00, T:0.39
Consensus pattern (22 bp):
TATATATAAATAATAATAATAT
Found at i:159390578 original size:71 final size:72
Alignment explanation
Indices: 159390420--159390595 Score: 230
Period size: 71 Copynumber: 2.5 Consensus size: 72
159390410 GTTAAAAAGA
* * * * *
159390420 CTCAACTCACCTCTCGCAATTTGAATTGACTTTTGAAAATAGAATTTGAAAATACCTTAGCGTGC
1 CTCAACTCACCTCTCGCAATATGAGTTGATTTTTGAAAATAGAATTTGAAAATACCTCAACGTGC
159390485 CGCGAGG
66 CGCGAGG
* *
159390492 CTCAACTCACTTCTCGCAATATGAGTTGATTTTTGAAACATA-AA-TTGAAATTACCTCAACGTG
1 CTCAACTCACCTCTCGCAATATGAGTTGATTTTTGAAA-ATAGAATTTGAAAATACCTCAACGTG
* **
159390555 TCTTGAGG
65 CCGCGAGG
*
159390563 CTCAACTCACCTCTCGCAATATGAGCTGATTTT
1 CTCAACTCACCTCTCGCAATATGAGTTGATTTT
159390596 CTTGGAAAAC
Statistics
Matches: 91, Mismatches: 12, Indels: 3
0.86 0.11 0.03
Matches are distributed among these distances:
71 52 0.57
72 36 0.40
73 3 0.03
ACGTcount: A:0.30, C:0.23, G:0.16, T:0.32
Consensus pattern (72 bp):
CTCAACTCACCTCTCGCAATATGAGTTGATTTTTGAAAATAGAATTTGAAAATACCTCAACGTGC
CGCGAGG
Found at i:159390729 original size:160 final size:160
Alignment explanation
Indices: 159390460--159390846 Score: 704
Period size: 160 Copynumber: 2.4 Consensus size: 160
159390450 TTTTGAAAAT
* *
159390460 AGAATTTGAAAATACCTTAGCGTGCCGC-GAGGCTCAACTCACTTCTCGCAATATGAGTTGATTT
1 AGAAATTGAAAATACCTCAGCGTGCC-CTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTT
159390524 TTGAAACATAAATTGAAATTACCTCAACGTGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGC
65 TTGAAACATAAATTGAAATTACCTCAACGTGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGC
*
159390589 TGATTTTCTTGGAAAACATGAATTAAAAAGC
130 TAATTTTCTTGGAAAACATGAATTAAAAAGC
*
159390620 AGAAATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATACGAGTTGATTTT
1 AGAAATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTTT
*
159390685 TGAAACATACATTGAAATTACCTCAACGTGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCT
66 TGAAACATAAATTGAAATTACCTCAACGTGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCT
159390750 AATTTTCTTGGAAAACATGAATTAAAAAGC
131 AATTTTCTTGGAAAACATGAATTAAAAAGC
*
159390780 AGAAATTGAAAATACCTCAGCGTGCCCTGAGGCTCTACTCACTTCTCGCAATATGAGTTGATTTT
1 AGAAATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTTT
159390845 TG
66 TG
159390847 GAAAAAACAA
Statistics
Matches: 219, Mismatches: 7, Indels: 2
0.96 0.03 0.01
Matches are distributed among these distances:
159 1 0.00
160 218 1.00
ACGTcount: A:0.32, C:0.22, G:0.17, T:0.29
Consensus pattern (160 bp):
AGAAATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATATGAGTTGATTTT
TGAAACATAAATTGAAATTACCTCAACGTGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCT
AATTTTCTTGGAAAACATGAATTAAAAAGC
Found at i:159390755 original size:71 final size:71
Alignment explanation
Indices: 159390624--159390755 Score: 192
Period size: 71 Copynumber: 1.9 Consensus size: 71
159390614 AAAAGCAGAA
* * * *
159390624 ATTGAAAATACCTCAGCGTGCCCTGAGGCTCAACTCACTTCTCGCAATACGAGTTGATTTTTGAA
1 ATTGAAAATACCTCAACGTGCCCTGAGGCTCAACTCACCTCTCGCAATACGAGCTAATTTTTGAA
159390689 ACATAC
66 ACATAC
* * * *
159390695 ATTGAAATTACCTCAACGTGTCTTGAGGCTCAACTCACCTCTCGCAATATGAGCTAATTTT
1 ATTGAAAATACCTCAACGTGCCCTGAGGCTCAACTCACCTCTCGCAATACGAGCTAATTTT
159390756 CTTGGAAAAC
Statistics
Matches: 53, Mismatches: 8, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
71 53 1.00
ACGTcount: A:0.29, C:0.25, G:0.16, T:0.30
Consensus pattern (71 bp):
ATTGAAAATACCTCAACGTGCCCTGAGGCTCAACTCACCTCTCGCAATACGAGCTAATTTTTGAA
ACATAC
Found at i:159403290 original size:21 final size:23
Alignment explanation
Indices: 159403264--159403316 Score: 76
Period size: 21 Copynumber: 2.4 Consensus size: 23
159403254 ATACATATGT
159403264 ATAATAAT-GATGAAAATAAT-A-
1 ATAATAATAG-TGAAAATAATAAG
159403285 ATAATAATAGTGAAAATAATAAG
1 ATAATAATAGTGAAAATAATAAG
159403308 ATAATAATA
1 ATAATAATA
159403317 AATATAATAG
Statistics
Matches: 29, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
21 18 0.62
22 2 0.07
23 9 0.31
ACGTcount: A:0.62, C:0.00, G:0.09, T:0.28
Consensus pattern (23 bp):
ATAATAATAGTGAAAATAATAAG
Found at i:159403542 original size:3 final size:3
Alignment explanation
Indices: 159403524--159403565 Score: 50
Period size: 3 Copynumber: 13.7 Consensus size: 3
159403514 AAACGTATAC
*
159403524 TAA TATA TAG TAA TAA TAA TAA TAA TAA TAA -AA TAA TCAA TA
1 TAA TA-A TAA TAA TAA TAA TAA TAA TAA TAA TAA TAA T-AA TA
159403566 TTAAATAAGA
Statistics
Matches: 34, Mismatches: 2, Indels: 6
0.81 0.05 0.14
Matches are distributed among these distances:
2 2 0.06
3 26 0.76
4 6 0.18
ACGTcount: A:0.62, C:0.02, G:0.02, T:0.33
Consensus pattern (3 bp):
TAA
Found at i:159404474 original size:26 final size:26
Alignment explanation
Indices: 159404439--159404574 Score: 218
Period size: 26 Copynumber: 5.2 Consensus size: 26
159404429 TGATACAAAT
159404439 TGATAATAGGTTAGGTAAATGTTTCA
1 TGATAATAGGTTAGGTAAATGTTTCA
*
159404465 TAATAATAGGTTAGGTAAATGTTTCA
1 TGATAATAGGTTAGGTAAATGTTTCA
* * *
159404491 TAATAATAGGTTAGGTAAGTGTTCCA
1 TGATAATAGGTTAGGTAAATGTTTCA
* *
159404517 TGATAATAGATTAGGTAAATGTTCCA
1 TGATAATAGGTTAGGTAAATGTTTCA
159404543 TGATAATAGGTTAGGTAAATGTTTCA
1 TGATAATAGGTTAGGTAAATGTTTCA
159404569 TGATAA
1 TGATAA
159404575 GAATTTCATG
Statistics
Matches: 102, Mismatches: 8, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 102 1.00
ACGTcount: A:0.37, C:0.05, G:0.21, T:0.37
Consensus pattern (26 bp):
TGATAATAGGTTAGGTAAATGTTTCA
Found at i:159411648 original size:39 final size:40
Alignment explanation
Indices: 159411470--159411652 Score: 181
Period size: 40 Copynumber: 4.6 Consensus size: 40
159411460 CCGCACCAAG
* * * * * * * *
159411470 GCCTACGGGACTTAACCCGGATATCACGATTTGCACAAAT
1 GCCTTCGGGTCTTAGCCCGGATATAACTACTAGCACAATT
* * *
159411510 GCCTTCGGGTCTTAGCCCGGATTTAACAACTTGCACGAA-T
1 GCCTTCGGGTCTTAGCCCGGATATAACTACTAGCAC-AATT
*
159411550 GCCTTCGGGTCTTAGCCCGGATATAGCTACTAGCACAATT
1 GCCTTCGGGTCTTAGCCCGGATATAACTACTAGCACAATT
* * * *
159411590 GCCTTCGGGTCTTAACCCGGATATAATTTC-AGCATAATT
1 GCCTTCGGGTCTTAGCCCGGATATAACTACTAGCACAATT
* *
159411629 GTCTTCGGGGCTTAGCCCGGATAT
1 GCCTTCGGGTCTTAGCCCGGATAT
159411653 CATTCAATTT
Statistics
Matches: 122, Mismatches: 19, Indels: 5
0.84 0.13 0.03
Matches are distributed among these distances:
39 31 0.25
40 89 0.73
41 2 0.02
ACGTcount: A:0.23, C:0.26, G:0.22, T:0.28
Consensus pattern (40 bp):
GCCTTCGGGTCTTAGCCCGGATATAACTACTAGCACAATT
Found at i:159414307 original size:29 final size:29
Alignment explanation
Indices: 159414274--159414405 Score: 140
Period size: 29 Copynumber: 4.6 Consensus size: 29
159414264 GTGACGAGAT
*
159414274 TGGCACTAAGTGTGCGTGCTGGAAATATA
1 TGGCACTAAGTGTGCGTGCTGGAAATACA
* *
159414303 TGGCACTAAGTGTGCATGCTGGAAATATA
1 TGGCACTAAGTGTGCGTGCTGGAAATACA
* * ***
159414332 TGGCACTAAGTGTGCGAGCTCGAAGGGCA
1 TGGCACTAAGTGTGCGTGCTGGAAATACA
* * * *
159414361 TGGCACTATGTGTGCGGGCT-TAAATCGCA
1 TGGCACTAAGTGTGCGTGCTGGAAAT-ACA
159414390 TGGCACTAAGTGTGCG
1 TGGCACTAAGTGTGCG
159414406 AAATCGAGTA
Statistics
Matches: 88, Mismatches: 14, Indels: 2
0.85 0.13 0.02
Matches are distributed among these distances:
28 2 0.02
29 86 0.98
ACGTcount: A:0.25, C:0.17, G:0.33, T:0.25
Consensus pattern (29 bp):
TGGCACTAAGTGTGCGTGCTGGAAATACA
Found at i:159416875 original size:20 final size:20
Alignment explanation
Indices: 159416852--159416889 Score: 58
Period size: 20 Copynumber: 1.9 Consensus size: 20
159416842 CACATCCAAA
*
159416852 TACAAAATTTTAAAAATCTT
1 TACAAAATATTAAAAATCTT
*
159416872 TACAAAATATTGAAAATC
1 TACAAAATATTAAAAATC
159416890 GCGAATAAAC
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
20 16 1.00
ACGTcount: A:0.53, C:0.11, G:0.03, T:0.34
Consensus pattern (20 bp):
TACAAAATATTAAAAATCTT
Found at i:159417019 original size:47 final size:47
Alignment explanation
Indices: 159416948--159417103 Score: 231
Period size: 47 Copynumber: 3.3 Consensus size: 47
159416938 CCCTTCGGGA
* * * * * *
159416948 CTTATCACATTTATACACTTTCACATCCATCACGTTGGCCACTCGGC
1 CTTATCACATATATACACTTTCACATTCATCACATCGGCCATTAGGC
*
159416995 CCTATCACATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATACACTTTCACATTCATCACATCGGCCATTAGGC
159417042 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCAC--ATATATACACTTTCACATTCATCACATCGGCCATTAGGC
159417091 CTTATCACATATA
1 CTTATCACATATA
159417104 CTATCATGTA
Statistics
Matches: 99, Mismatches: 8, Indels: 4
0.89 0.07 0.04
Matches are distributed among these distances:
47 52 0.53
49 47 0.47
ACGTcount: A:0.29, C:0.31, G:0.08, T:0.32
Consensus pattern (47 bp):
CTTATCACATATATACACTTTCACATTCATCACATCGGCCATTAGGC
Found at i:159417074 original size:49 final size:49
Alignment explanation
Indices: 159416948--159417103 Score: 230
Period size: 49 Copynumber: 3.3 Consensus size: 49
159416938 CCCTTCGGGA
* * * * *
159416948 CTTATCACAT-T-TATACACTTTCACATCCATCACGTTGGCCACTCGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
*
159416995 CCTATCAC--ATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
159417042 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
159417091 CTTATCACATATA
1 CTTATCACATATA
159417104 CTATCATGTA
Statistics
Matches: 98, Mismatches: 7, Indels: 6
0.88 0.06 0.05
Matches are distributed among these distances:
46 1 0.01
47 45 0.46
49 52 0.53
ACGTcount: A:0.29, C:0.31, G:0.08, T:0.32
Consensus pattern (49 bp):
CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
Found at i:159419856 original size:28 final size:28
Alignment explanation
Indices: 159419795--159419892 Score: 108
Period size: 28 Copynumber: 3.5 Consensus size: 28
159419785 TCACAAATTG
** * *
159419795 GCACTAAGTGTGCGGGTTCAAATTATACA
1 GCACTAAGTGTGCAAGTTC-GATTATATA
*
159419824 GCACTAAGTGTGCAAGTTTGATTATATA
1 GCACTAAGTGTGCAAGTTCGATTATATA
* *
159419852 GCACTAAGTGTGCGAGTTCGACTAT-TAA
1 GCACTAAGTGTGCAAGTTCGATTATAT-A
159419880 GCACTAAGTGTGC
1 GCACTAAGTGTGC
159419893 GGGCTTATTG
Statistics
Matches: 60, Mismatches: 8, Indels: 3
0.85 0.11 0.04
Matches are distributed among these distances:
27 1 0.02
28 43 0.72
29 16 0.27
ACGTcount: A:0.30, C:0.16, G:0.24, T:0.30
Consensus pattern (28 bp):
GCACTAAGTGTGCAAGTTCGATTATATA
Found at i:159422750 original size:80 final size:81
Alignment explanation
Indices: 159422653--159422831 Score: 252
Period size: 80 Copynumber: 2.2 Consensus size: 81
159422643 GCTCGATTGT
* * *
159422653 CTTCGGGACATAGCCCGGTTATAGTAATTCGCACAATTGCCTTCGGGAATTAACCCGGATTTAGT
1 CTTCGGGACTTAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGAATTAACCCGGATTTAGT
* * *
159422718 AAC-TCGTACAAATGC
66 AACTTAGCACAAAAGC
* * * *
159422733 CTTCGGGACTTAACCCGGTTTTGGTAACTCGCACAAATGCCTTCGGGAATTGACCCGGATTTAGT
1 CTTCGGGACTTAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGAATTAACCCGGATTTAGT
*
159422798 CACTTAGCACAAAAGC
66 AACTTAGCACAAAAGC
159422814 CTTCGGGACTTAGCCCGG
1 CTTCGGGACTTAGCCCGG
159422832 ACATCATTCG
Statistics
Matches: 86, Mismatches: 12, Indels: 1
0.87 0.12 0.01
Matches are distributed among these distances:
80 60 0.70
81 26 0.30
ACGTcount: A:0.25, C:0.26, G:0.23, T:0.26
Consensus pattern (81 bp):
CTTCGGGACTTAGCCCGGTTATAGTAACTCGCACAAATGCCTTCGGGAATTAACCCGGATTTAGT
AACTTAGCACAAAAGC
Found at i:159422820 original size:41 final size:40
Alignment explanation
Indices: 159422653--159422832 Score: 202
Period size: 40 Copynumber: 4.5 Consensus size: 40
159422643 GCTCGATTGT
* * *
159422653 CTTCGGGACA-TAGCCCGG-TTATAGTAATTCGCACAATTGC
1 CTTCGGGA-ATTAACCCGGATT-TAGTAACTCGCACAAATGC
*
159422693 CTTCGGGAATTAACCCGGATTTAGTAACTCGTACAAATGC
1 CTTCGGGAATTAACCCGGATTTAGTAACTCGCACAAATGC
* * *
159422733 CTTCGGGACTTAACCCGGTTTTGGTAACTCGCACAAATGC
1 CTTCGGGAATTAACCCGGATTTAGTAACTCGCACAAATGC
* * * *
159422773 CTTCGGGAATTGACCCGGATTTAGTCACTTAGCACAAAAGC
1 CTTCGGGAATTAACCCGGATTTAGTAAC-TCGCACAAATGC
* *
159422814 CTTCGGGACTTAGCCCGGA
1 CTTCGGGAATTAACCCGGA
159422833 CATCATTCGA
Statistics
Matches: 119, Mismatches: 18, Indels: 5
0.84 0.13 0.04
Matches are distributed among these distances:
39 1 0.01
40 90 0.76
41 28 0.24
ACGTcount: A:0.26, C:0.26, G:0.23, T:0.26
Consensus pattern (40 bp):
CTTCGGGAATTAACCCGGATTTAGTAACTCGCACAAATGC
Found at i:159424592 original size:41 final size:41
Alignment explanation
Indices: 159424535--159424630 Score: 183
Period size: 41 Copynumber: 2.3 Consensus size: 41
159424525 CTGTCACAGT
159424535 CTTAGCCCGGATATAGTCACTAGCACAAAATGCCTTCGGGA
1 CTTAGCCCGGATATAGTCACTAGCACAAAATGCCTTCGGGA
*
159424576 CTTAGCCCGGATATAGTCACTAGCACAAAATGCCTTCGGGT
1 CTTAGCCCGGATATAGTCACTAGCACAAAATGCCTTCGGGA
159424617 CTTAGCCCGGATAT
1 CTTAGCCCGGATAT
159424631 CATCCGAATA
Statistics
Matches: 54, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
41 54 1.00
ACGTcount: A:0.27, C:0.27, G:0.22, T:0.24
Consensus pattern (41 bp):
CTTAGCCCGGATATAGTCACTAGCACAAAATGCCTTCGGGA
Found at i:159430945 original size:40 final size:40
Alignment explanation
Indices: 159430862--159431069 Score: 184
Period size: 40 Copynumber: 5.2 Consensus size: 40
159430852 CGGGATTTAA
* * * * * *
159430862 CCGGATATAGCGACTCGCTCGATTGTCTTCGGGACCTAGC
1 CCGGATATAGCAACTCGCACGAATGCCTTCGGGTCTTAGC
* ** * * *
159430902 CCGGTTATAGTGATTCGCACGATTGCCTTCGGGTCTTAAC
1 CCGGATATAGCAACTCGCACGAATGCCTTCGGGTCTTAGC
* * * * *
159430942 CCGGATTTGGTAACTTGCACAAATGCCTTCGGGTCTTAGC
1 CCGGATATAGCAACTCGCACGAATGCCTTCGGGTCTTAGC
*
159430982 CCGGATATAACAACTCGCACGAATGCCTTCGGGTCTTAGC
1 CCGGATATAGCAACTCGCACGAATGCCTTCGGGTCTTAGC
*** * * *
159431022 CCGGATATAATTACTAGCA-TAATTGCCTTCGGGACTTAGC
1 CCGGATATAGCAACTCGCACGAA-TGCCTTCGGGTCTTAGC
159431062 CCGGATAT
1 CCGGATAT
159431070 CATTCCAATG
Statistics
Matches: 139, Mismatches: 28, Indels: 2
0.82 0.17 0.01
Matches are distributed among these distances:
39 2 0.01
40 137 0.99
ACGTcount: A:0.22, C:0.26, G:0.24, T:0.28
Consensus pattern (40 bp):
CCGGATATAGCAACTCGCACGAATGCCTTCGGGTCTTAGC
Found at i:159430982 original size:80 final size:80
Alignment explanation
Indices: 159430888--159431069 Score: 220
Period size: 80 Copynumber: 2.3 Consensus size: 80
159430878 GCTCGATTGT
* * *** * * * **
159430888 CTTCGGGACCTAGCCCGGTTATAGTGATTCGCACGATTGCCTTCGGGTCTTAACCCGGATTTGGT
1 CTTCGGGACTTAGCCCGGATATAACAACTCGCACGAATGCCTTCGGGTCTTAACCCGGATATAAT
*
159430953 AACTTGCACAAATGC
66 AACTAGCACAAATGC
* *
159430968 CTTCGGGTCTTAGCCCGGATATAACAACTCGCACGAATGCCTTCGGGTCTTAGCCCGGATATAAT
1 CTTCGGGACTTAGCCCGGATATAACAACTCGCACGAATGCCTTCGGGTCTTAACCCGGATATAAT
* * *
159431033 TACTAGCATAATTGC
66 AACTAGCACAAATGC
159431048 CTTCGGGACTTAGCCCGGATAT
1 CTTCGGGACTTAGCCCGGATAT
159431070 CATTCCAATG
Statistics
Matches: 85, Mismatches: 17, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
80 85 1.00
ACGTcount: A:0.22, C:0.26, G:0.24, T:0.28
Consensus pattern (80 bp):
CTTCGGGACTTAGCCCGGATATAACAACTCGCACGAATGCCTTCGGGTCTTAACCCGGATATAAT
AACTAGCACAAATGC
Done.