Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Chr06 132263754
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 132263754
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Warning! 372 characters in sequence are not A, C, G, or T
File 244 of 433
Found at i:76067323 original size:29 final size:29
Alignment explanation
Indices: 76067290--76067354 Score: 112
Period size: 29 Copynumber: 2.2 Consensus size: 29
76067280 GTGACGAGAT
*
76067290 TGGCACTAAGTGTGCATGCTGGAAATATA
1 TGGCACTAAGTGTGCATGCTGGAAAAATA
76067319 TGGCACTAAGTGTGCATGCTGGAAAAATA
1 TGGCACTAAGTGTGCATGCTGGAAAAATA
*
76067348 CGGCACT
1 TGGCACT
76067355 GGGTGTGCGA
Statistics
Matches: 34, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
29 34 1.00
ACGTcount: A:0.31, C:0.17, G:0.28, T:0.25
Consensus pattern (29 bp):
TGGCACTAAGTGTGCATGCTGGAAAAATA
Found at i:76069548 original size:29 final size:29
Alignment explanation
Indices: 76069506--76069567 Score: 90
Period size: 29 Copynumber: 2.1 Consensus size: 29
76069496 GTTATAAAAT
*
76069506 ACCTTAATTTTCTT-ATATATGTTTTTGTA
1 ACCTTAATTCTCTTGAT-TATGTTTTTGTA
*
76069535 ACCTTAATTCTCTTGCTTATGTTTTTGTA
1 ACCTTAATTCTCTTGATTATGTTTTTGTA
76069564 ACCT
1 ACCT
76069568 ATGGTGTTTA
Statistics
Matches: 30, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
29 29 0.97
30 1 0.03
ACGTcount: A:0.21, C:0.16, G:0.08, T:0.55
Consensus pattern (29 bp):
ACCTTAATTCTCTTGATTATGTTTTTGTA
Found at i:76069715 original size:26 final size:26
Alignment explanation
Indices: 76069679--76069731 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
76069669 ACTATAAATC
76069679 TCTTAGTTTTCATAAAACGAGACTAT
1 TCTTAGTTTTCATAAAACGAGACTAT
76069705 TCTTAGTTTTCATAAAACGAGACTAT
1 TCTTAGTTTTCATAAAACGAGACTAT
76069731 T
1 T
76069732 ATTTTAAGTA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.34, C:0.15, G:0.11, T:0.40
Consensus pattern (26 bp):
TCTTAGTTTTCATAAAACGAGACTAT
Found at i:76069785 original size:11 final size:13
Alignment explanation
Indices: 76069759--76069789 Score: 53
Period size: 14 Copynumber: 2.3 Consensus size: 13
76069749 GATGTTTTAG
76069759 TATTAAATATTAT
1 TATTAAATATTAT
76069772 TATTAAAATATTAT
1 TATT-AAATATTAT
76069786 TATT
1 TATT
76069790 TGAAATAAGA
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
13 4 0.24
14 13 0.76
ACGTcount: A:0.45, C:0.00, G:0.00, T:0.55
Consensus pattern (13 bp):
TATTAAATATTAT
Found at i:76074749 original size:24 final size:23
Alignment explanation
Indices: 76074722--76074786 Score: 60
Period size: 24 Copynumber: 2.7 Consensus size: 23
76074712 TATTGCATAC
76074722 ATAAAAAAATTATATTTATCTAAT
1 ATAAAAAAATTATATTTAT-TAAT
* * *
76074746 ATAAAAATAA-AATGATGTATTATT
1 ATAAAAA-AATTAT-ATTTATTAAT
*
76074770 ATAAAAAATTTATATTT
1 ATAAAAAAATTATATTT
76074787 CAAAATTTTA
Statistics
Matches: 32, Mismatches: 6, Indels: 7
0.71 0.13 0.16
Matches are distributed among these distances:
23 4 0.12
24 21 0.66
25 7 0.22
ACGTcount: A:0.54, C:0.02, G:0.03, T:0.42
Consensus pattern (23 bp):
ATAAAAAAATTATATTTATTAAT
Found at i:76079233 original size:49 final size:49
Alignment explanation
Indices: 76079180--76079404 Score: 297
Period size: 49 Copynumber: 4.5 Consensus size: 49
76079170 CTGGTACGCA
* * * *
76079180 TAGTAGCCTACACATAGTACTACACATGCGACCAATTATCCGGTACACG
1 TAGTAGCCTGCACTTAGTACTACACACGTGACCAATTATCCGGTACACG
76079229 TAGTAGCCTGCACTTAGTACTACACACGTGACCAATTATCCGGTACACG
1 TAGTAGCCTGCACTTAGTACTACACACGTGACCAATTATCCGGTACACG
* ** ***
76079278 CAGTAGCCTGCACTTAGTACTACACACGTGACCTAACCATCTTATACACG
1 TAGTAGCCTGCACTTAGTACTACACACGTGACC-AATTATCCGGTACACG
* * * *
76079328 TAGTAGCCTGCACTTAGTACTACACACGTGATCACAATTTTCAGGTACGCA
1 TAGTAGCCTGCACTTAGTACTACACACGTGA-C-CAATTATCCGGTACACG
76079379 TAGTAGCCTGCACTTAGTACTACACA
1 TAGTAGCCTGCACTTAGTACTACACA
76079405 TGCGACCTCA
Statistics
Matches: 154, Mismatches: 19, Indels: 4
0.87 0.11 0.02
Matches are distributed among these distances:
49 77 0.50
50 41 0.27
51 35 0.23
52 1 0.01
ACGTcount: A:0.30, C:0.28, G:0.16, T:0.25
Consensus pattern (49 bp):
TAGTAGCCTGCACTTAGTACTACACACGTGACCAATTATCCGGTACACG
Found at i:76079346 original size:99 final size:101
Alignment explanation
Indices: 76079223--76079404 Score: 305
Period size: 101 Copynumber: 1.8 Consensus size: 101
76079213 AATTATCCGG
* *
76079223 TACACGTAGTAGCCTGCACTTAGTACTACACACGTGA-C-CAATTATCCGGTACACGCAGTAGCC
1 TACACGTAGTAGCCTGCACTTAGTACTACACACGTGATCACAATTATCAGGTACACACAGTAGCC
76079286 TGCACTTAGTACTACACACGTGACCTAACCATCTTA
66 TGCACTTAGTACTACACACGTGACCTAACCATCTTA
* * *
76079322 TACACGTAGTAGCCTGCACTTAGTACTACACACGTGATCACAATTTTCAGGTACGCATAGTAGCC
1 TACACGTAGTAGCCTGCACTTAGTACTACACACGTGATCACAATTATCAGGTACACACAGTAGCC
76079387 TGCACTTAGTACTACACA
66 TGCACTTAGTACTACACA
76079405 TGCGACCTCA
Statistics
Matches: 76, Mismatches: 5, Indels: 2
0.92 0.06 0.02
Matches are distributed among these distances:
99 37 0.49
100 1 0.01
101 38 0.50
ACGTcount: A:0.30, C:0.29, G:0.16, T:0.25
Consensus pattern (101 bp):
TACACGTAGTAGCCTGCACTTAGTACTACACACGTGATCACAATTATCAGGTACACACAGTAGCC
TGCACTTAGTACTACACACGTGACCTAACCATCTTA
Found at i:76086610 original size:47 final size:48
Alignment explanation
Indices: 76086503--76086633 Score: 176
Period size: 47 Copynumber: 2.8 Consensus size: 48
76086493 GTGCGAATGA
** * * *
76086503 TACCTTGATTTTCCTACTGGCCATGGTATAGGTATTTCAGAGAGGAGT
1 TACCTTGATTTGGCTACTGGCCATGGTATAGGTACTACAGAGAGAAGT
* *
76086551 TACCTTGATTTGGCTA-TGGGCCATGGTATAGGTACTAC-GGGATAAGT
1 TACCTTGATTTGGCTACT-GGCCATGGTATAGGTACTACAGAGAGAAGT
76086598 TACCTTGATTTGGCTACTGGCCATGGTATAGGTACT
1 TACCTTGATTTGGCTACTGGCCATGGTATAGGTACT
76086634 TATCGATTGT
Statistics
Matches: 74, Mismatches: 7, Indels: 5
0.86 0.08 0.06
Matches are distributed among these distances:
47 41 0.55
48 33 0.45
ACGTcount: A:0.22, C:0.17, G:0.27, T:0.34
Consensus pattern (48 bp):
TACCTTGATTTGGCTACTGGCCATGGTATAGGTACTACAGAGAGAAGT
Found at i:76086651 original size:47 final size:49
Alignment explanation
Indices: 76086500--76086652 Score: 146
Period size: 47 Copynumber: 3.2 Consensus size: 49
76086490 TGGGTGCGAA
** * *
76086500 TGATACCTTGATTTTCCTACTGGCCATGGTATAGGTA-TT-TCAGAGAG
1 TGATACCTTGATTTGGCTACTGGCCATGGTATAGGTACTTATCGGATAG
76086547 -GAGTTACCTTGATTTGGCTA-TGGGCCATGGTATAGGTAC-TA-CGGGATAAG
1 TGA--TACCTTGATTTGGCTACT-GGCCATGGTATAGGTACTTATC-GGAT-AG
*
76086597 T--TACCTTGATTTGGCTACTGGCCATGGTATAGGTACTTATC-GATTG
1 TGATACCTTGATTTGGCTACTGGCCATGGTATAGGTACTTATCGGATAG
76086643 TGAT-CCTTGA
1 TGATACCTTGA
76086653 GTATCCGACT
Statistics
Matches: 88, Mismatches: 5, Indels: 26
0.74 0.04 0.22
Matches are distributed among these distances:
46 4 0.05
47 43 0.49
48 36 0.41
49 3 0.03
50 2 0.02
ACGTcount: A:0.22, C:0.16, G:0.26, T:0.35
Consensus pattern (49 bp):
TGATACCTTGATTTGGCTACTGGCCATGGTATAGGTACTTATCGGATAG
Found at i:76086968 original size:72 final size:72
Alignment explanation
Indices: 76086885--76087028 Score: 261
Period size: 72 Copynumber: 2.0 Consensus size: 72
76086875 TGAATTGAGT
* * *
76086885 TATTCATTTACGAACTTTCTAAGCTATGAAACTTACTTTTTGTTATTTGTTTATGTTTTATAGAG
1 TATTCACTTACGAACTTACTAAGCTATGAAACTTACTTTTTGTTATTTGTTTATGTTTTATAGAA
76086950 AATTAAA
66 AATTAAA
76086957 TATTCACTTACGAACTTACTAAGCTATGAAACTTACTTTTTGTTATTTGTTTATGTTTTATAGAA
1 TATTCACTTACGAACTTACTAAGCTATGAAACTTACTTTTTGTTATTTGTTTATGTTTTATAGAA
76087022 AATTAAA
66 AATTAAA
76087029 GCTAGCTCGG
Statistics
Matches: 69, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
72 69 1.00
ACGTcount: A:0.32, C:0.10, G:0.10, T:0.47
Consensus pattern (72 bp):
TATTCACTTACGAACTTACTAAGCTATGAAACTTACTTTTTGTTATTTGTTTATGTTTTATAGAA
AATTAAA
Found at i:76091588 original size:53 final size:54
Alignment explanation
Indices: 76091520--76091726 Score: 218
Period size: 53 Copynumber: 3.8 Consensus size: 54
76091510 TTCCTTTTTA
* *
76091520 AACTTACCATTGCCATGTCTTGACATGGTCTTACGTGGTATCCTTGCCTTAT-G
1 AACTTACCAATGCCATGTCTTGACATGGTCTTACATGGTATCCTTGCCTTATAG
* * * * * * *
76091573 AACTCACCATTGCCATGCCTTGGCACGGTCTTACATGGGATCTTTGCCTTATAG
1 AACTTACCAATGCCATGTCTTGACATGGTCTTACATGGTATCCTTGCCTTATAG
** * * * * *
76091627 TAGTTTATCAATGCCATGTCTTGACATGGTCTTACATGATTTCCTTACCTTGTAG
1 -AACTTACCAATGCCATGTCTTGACATGGTCTTACATGGTATCCTTGCCTTATAG
** * *
76091682 AACTTACCAATGCCATGAATTGGCATGGTCTTACTTGGTATCCTT
1 AACTTACCAATGCCATGTCTTGACATGGTCTTACATGGTATCCTT
76091727 AAACCCTAAT
Statistics
Matches: 122, Mismatches: 30, Indels: 3
0.79 0.19 0.02
Matches are distributed among these distances:
53 45 0.37
54 37 0.30
55 40 0.33
ACGTcount: A:0.21, C:0.24, G:0.18, T:0.37
Consensus pattern (54 bp):
AACTTACCAATGCCATGTCTTGACATGGTCTTACATGGTATCCTTGCCTTATAG
Found at i:76098358 original size:16 final size:17
Alignment explanation
Indices: 76098319--76098358 Score: 64
Period size: 17 Copynumber: 2.4 Consensus size: 17
76098309 GGCCGAAGTG
*
76098319 GGGCCCAGTGGGCTTTC
1 GGGCCCAATGGGCTTTC
76098336 GGGCCCAATGGGCTTTC
1 GGGCCCAATGGGCTTTC
76098353 -GGCCCA
1 GGGCCCA
76098359 TTTGTAAAAA
Statistics
Matches: 22, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
16 6 0.27
17 16 0.73
ACGTcount: A:0.10, C:0.33, G:0.38, T:0.20
Consensus pattern (17 bp):
GGGCCCAATGGGCTTTC
Found at i:76098647 original size:25 final size:25
Alignment explanation
Indices: 76098618--76098665 Score: 69
Period size: 25 Copynumber: 1.9 Consensus size: 25
76098608 TTATAATATG
* * *
76098618 AAAATGACCGTTTTGCCCCTAGGTA
1 AAAATGACCATTATACCCCTAGGTA
76098643 AAAATGACCATTATACCCCTAGG
1 AAAATGACCATTATACCCCTAGG
76098666 GTTTATATAT
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
25 20 1.00
ACGTcount: A:0.33, C:0.25, G:0.17, T:0.25
Consensus pattern (25 bp):
AAAATGACCATTATACCCCTAGGTA
Found at i:76098732 original size:20 final size:20
Alignment explanation
Indices: 76098709--76098767 Score: 109
Period size: 20 Copynumber: 3.0 Consensus size: 20
76098699 TAAACATGGT
76098709 ATGTATGATATGCACATGAC
1 ATGTATGATATGCACATGAC
*
76098729 ATGTATGATATGCACATGAT
1 ATGTATGATATGCACATGAC
76098749 ATGTATGATATGCACATGA
1 ATGTATGATATGCACATGA
76098768 GGTATCCATA
Statistics
Matches: 38, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
20 38 1.00
ACGTcount: A:0.36, C:0.12, G:0.20, T:0.32
Consensus pattern (20 bp):
ATGTATGATATGCACATGAC
Found at i:76098749 original size:11 final size:11
Alignment explanation
Indices: 76098713--76098767 Score: 55
Period size: 11 Copynumber: 5.4 Consensus size: 11
76098703 CATGGTATGT
76098713 ATGATATGCAC
1 ATGATATGCAC
* *
76098724 ATGACATG--T
1 ATGATATGCAC
76098733 ATGATATGCAC
1 ATGATATGCAC
*
76098744 ATGATATG--T
1 ATGATATGCAC
76098753 ATGATATGCAC
1 ATGATATGCAC
76098764 ATGA
1 ATGA
76098768 GGTATCCATA
Statistics
Matches: 34, Mismatches: 6, Indels: 8
0.71 0.12 0.17
Matches are distributed among these distances:
9 15 0.44
11 19 0.56
ACGTcount: A:0.36, C:0.13, G:0.20, T:0.31
Consensus pattern (11 bp):
ATGATATGCAC
Found at i:76098845 original size:24 final size:24
Alignment explanation
Indices: 76098818--76099058 Score: 387
Period size: 24 Copynumber: 10.1 Consensus size: 24
76098808 GAGGAAGTGC
*
76098818 AAAAGGGCTTATGCCCCAGTGATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76098842 AAAAGGGCTTATGCCCCAGTGATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76098866 AAAAGGGCTTATGCCCCAGTTATC
1 AAAAGGGCTTATGCCCCAGTTATT
76098890 AAAAGGGCTTATGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
* *
76098914 GAAAGGGCTTATGCCCCAGTTATC
1 AAAAGGGCTTATGCCCCAGTTATT
76098938 AAAAGGGCTTATGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76098962 GAAAGGGCTTATGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
* *
76098986 GAAAGGGCTTATGCCCTAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
76099010 AAAAGGGCTT-TGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76099033 AAAAGGGCTT-TGCCCTAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
76099056 AAA
1 AAA
76099059 GAGGCTAGGC
Statistics
Matches: 205, Mismatches: 12, Indels: 1
0.94 0.06 0.00
Matches are distributed among these distances:
23 37 0.18
24 168 0.82
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (24 bp):
AAAAGGGCTTATGCCCCAGTTATT
Found at i:76101330 original size:46 final size:45
Alignment explanation
Indices: 76101277--76101449 Score: 188
Period size: 46 Copynumber: 3.8 Consensus size: 45
76101267 TGGTTCAGCA
* *
76101277 TCCGAACTCATTGAGTTGAGTCCGAGTTCACTTATGGATACGAATG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATAC-AACG
* * * * *
76101323 TCCGAACTCGTTGAGTTGAGTCCGAGTTC-GTGAAATGTA-ACTAGGCA
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACT--TATGGATAC-A-ACG
*
76101370 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATAC-AACG
* *
76101416 CCCGAGCTCGTTGAGTTGAGTCCGAGTTCACTTA
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTA
76101450 GGGGAGGGTT
Statistics
Matches: 105, Mismatches: 17, Indels: 10
0.80 0.13 0.08
Matches are distributed among these distances:
45 1 0.01
46 68 0.65
47 35 0.33
48 1 0.01
ACGTcount: A:0.24, C:0.21, G:0.26, T:0.29
Consensus pattern (45 bp):
TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATACAACG
Found at i:76101433 original size:93 final size:93
Alignment explanation
Indices: 76101274--76101444 Score: 288
Period size: 93 Copynumber: 1.8 Consensus size: 93
76101264 GGATGGTTCA
* * *
76101274 GCATCCGAACTCATTGAGTTGAGTCCGAGTTCACTTATGGATACGAATGTCCGAACTCGTTGAGT
1 GCATCCGAACTCATTGAGTTGAGTCCGAGTTCACTTATGGATACAAACGCCCGAACTCGTTGAGT
76101339 TGAGTCCGAGTTCGTGAAATGTAACTAG
66 TGAGTCCGAGTTCGTGAAATGTAACTAG
* * *
76101367 GCATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACGCCCGAGCTCGTTGAGT
1 GCATCCGAACTCATTGAGTTGAGTCCGAGTTCACTTATGGATACAAACGCCCGAACTCGTTGAGT
76101432 TGAGTCCGAGTTC
66 TGAGTCCGAGTTC
76101445 ACTTAGGGGA
Statistics
Matches: 72, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
93 72 1.00
ACGTcount: A:0.23, C:0.22, G:0.27, T:0.28
Consensus pattern (93 bp):
GCATCCGAACTCATTGAGTTGAGTCCGAGTTCACTTATGGATACAAACGCCCGAACTCGTTGAGT
TGAGTCCGAGTTCGTGAAATGTAACTAG
Found at i:76108823 original size:25 final size:25
Alignment explanation
Indices: 76108794--76108841 Score: 69
Period size: 25 Copynumber: 1.9 Consensus size: 25
76108784 TTATAATATG
* * *
76108794 AAAATGACTATTTTGCCCCTAGGTA
1 AAAATGACCATTATACCCCTAGGTA
76108819 AAAATGACCATTATACCCCTAGG
1 AAAATGACCATTATACCCCTAGG
76108842 GTTTATATAT
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
25 20 1.00
ACGTcount: A:0.35, C:0.23, G:0.15, T:0.27
Consensus pattern (25 bp):
AAAATGACCATTATACCCCTAGGTA
Found at i:76108908 original size:20 final size:20
Alignment explanation
Indices: 76108885--76108923 Score: 78
Period size: 20 Copynumber: 1.9 Consensus size: 20
76108875 TAAACATGGT
76108885 ATGTATGATATGCACATGAC
1 ATGTATGATATGCACATGAC
76108905 ATGTATGATATGCACATGA
1 ATGTATGATATGCACATGA
76108924 GGTATTCATA
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 19 1.00
ACGTcount: A:0.36, C:0.13, G:0.21, T:0.31
Consensus pattern (20 bp):
ATGTATGATATGCACATGAC
Found at i:76109001 original size:24 final size:24
Alignment explanation
Indices: 76108974--76109166 Score: 327
Period size: 24 Copynumber: 8.1 Consensus size: 24
76108964 GATGAAGTGC
*
76108974 AAAAGGGCTTATGCCCCAGTGATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76108998 AAAAGGGCTTATGCCCTAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76109022 AAAAGGGCTTATGCCCCAGTTATC
1 AAAAGGGCTTATGCCCCAGTTATT
76109046 AAAAGGGCTTATGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76109070 GAAAGGGCTTATGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
*
76109094 GAAAGGGCTTATGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
76109118 AAAAGGGCTT-TGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
76109141 AAAAGGGCTT-TGCCCCAGTTATT
1 AAAAGGGCTTATGCCCCAGTTATT
76109164 AAA
1 AAA
76109167 GAGGCTAGGC
Statistics
Matches: 162, Mismatches: 7, Indels: 1
0.95 0.04 0.01
Matches are distributed among these distances:
23 39 0.24
24 123 0.76
ACGTcount: A:0.28, C:0.21, G:0.22, T:0.28
Consensus pattern (24 bp):
AAAAGGGCTTATGCCCCAGTTATT
Found at i:76113171 original size:46 final size:46
Alignment explanation
Indices: 76113121--76113296 Score: 198
Period size: 46 Copynumber: 3.8 Consensus size: 46
76113111 TGGTTGAGCA
*
76113121 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAATG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACG
** * *
76113167 TCCGAACTATTTGAGTTGAGTCCGAGTTCA---A-GAGATGTAACTAGGCA
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATG-GATGCAA--A--CG
*
76113214 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAACG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACG
* * *
76113260 CCCGAGCTCGTTGAGTTGAGTCCGAGTTCGCTTATGG
1 TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGG
76113297 GCGGGTTACA
Statistics
Matches: 108, Mismatches: 13, Indels: 18
0.78 0.09 0.13
Matches are distributed among these distances:
42 1 0.01
43 7 0.06
45 1 0.01
46 63 0.58
47 28 0.26
48 1 0.01
50 6 0.06
51 1 0.01
ACGTcount: A:0.23, C:0.20, G:0.28, T:0.29
Consensus pattern (46 bp):
TCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACG
Found at i:76113277 original size:93 final size:93
Alignment explanation
Indices: 76113118--76113288 Score: 288
Period size: 93 Copynumber: 1.8 Consensus size: 93
76113108 GGATGGTTGA
* * *
76113118 GCATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAATGTCCGAACTATTTGAGT
1 GCATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACGCCCGAACTAGTTGAGT
76113183 TGAGTCCGAGTTCAAGAGATGTAACTAG
66 TGAGTCCGAGTTCAAGAGATGTAACTAG
* * *
76113211 GCATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCGAACGCCCGAGCTCGTTGAGT
1 GCATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACGCCCGAACTAGTTGAGT
76113276 TGAGTCCGAGTTC
66 TGAGTCCGAGTTC
76113289 GCTTATGGGC
Statistics
Matches: 72, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
93 72 1.00
ACGTcount: A:0.23, C:0.21, G:0.27, T:0.28
Consensus pattern (93 bp):
GCATCCGAACTCGTTGAGTTGAGTCCGAGTTCACTTATGGATGCAAACGCCCGAACTAGTTGAGT
TGAGTCCGAGTTCAAGAGATGTAACTAG
Found at i:76114778 original size:54 final size:52
Alignment explanation
Indices: 76114613--76114778 Score: 143
Period size: 55 Copynumber: 3.1 Consensus size: 52
76114603 GTTACAGTAA
* * * *
76114613 CCTTGCCTTATGAACTCACCATTGCCATGCCTTGGAATGGTCTTACATGGGAT
1 CCTTGCCTTATGAACTTACCAATG-CATGCCTTGGCATGGTCTTACATGGTAT
* ** * * * * *
76114666 CTTTGCCTTATGGTAGTTTATCAATGCTATGTCTTGACATGGTCTTACATGATTT
1 CCTTGCCTTAT-G-AACTTACCAATGC-ATGCCTTGGCATGGTCTTACATGGTAT
* **
76114721 CCTTGCCTTGTAGAACTTACCAATGACATGCCTTGGCATGGTCTTAGTTGGTAT
1 CCTTGCCTTAT-GAACTTACCAATG-CATGCCTTGGCATGGTCTTACATGGTAT
76114775 CCTT
1 CCTT
76114779 AAACCCTAAT
Statistics
Matches: 85, Mismatches: 24, Indels: 7
0.73 0.21 0.06
Matches are distributed among these distances:
53 10 0.12
54 36 0.42
55 39 0.46
ACGTcount: A:0.20, C:0.22, G:0.20, T:0.38
Consensus pattern (52 bp):
CCTTGCCTTATGAACTTACCAATGCATGCCTTGGCATGGTCTTACATGGTAT
Found at i:76120816 original size:19 final size:18
Alignment explanation
Indices: 76120775--76120823 Score: 50
Period size: 19 Copynumber: 2.8 Consensus size: 18
76120765 GTGAGGGGTG
76120775 TTACATA-ATA-TATATA
1 TTACATATATATTATATA
*
76120791 -TATATATATATTATATAA
1 TTACATATATATTATAT-A
*
76120809 TTACATATTTATTAT
1 TTACATATATATTAT
76120824 TTGATTTTAT
Statistics
Matches: 26, Mismatches: 3, Indels: 5
0.76 0.09 0.15
Matches are distributed among these distances:
15 5 0.19
16 3 0.12
17 5 0.19
18 1 0.04
19 12 0.46
ACGTcount: A:0.45, C:0.04, G:0.00, T:0.51
Consensus pattern (18 bp):
TTACATATATATTATATA
Found at i:76125538 original size:401 final size:400
Alignment explanation
Indices: 76124368--76125831 Score: 2748
Period size: 400 Copynumber: 3.7 Consensus size: 400
76124358 AAAAATAATT
76124368 AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
1 AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
76124433 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATT
66 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATT
* *
76124498 CATGGGATCTAAATTTCGGGTGTTACCAAAAAAAAACTTAACCGTTTAACAAAATCAATTCACAA
131 CATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAAAATCAATTCACAA
*
76124563 TTTCTTTCTTCTTTAAACCATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAGGTAAA
196 TTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAGGTAAA
76124628 GAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTTAAC
261 GAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTTAAC
*
76124693 AAAAACAGACTAAAAGGGGTGTATTCCTAGATCATGCCAAAATAAAGAAAAACATAATTAATTTG
326 AAAAACAGACTAAAAGGGGTGTATTCCTAGATCATGCCAAAATAAATAAAAACATAATTAATTTG
76124758 AAAACAAACA
391 AAAACAAACA
*
76124768 AATTTGAAAAGTTATAAAATCCAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
1 AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
*
76124833 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGACT
66 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATT
*
76124898 CATGGGATCTAGATTTCGGGTGTTACCACAAAAGAACTTAACCGTTTAACAAAATCAATTCACAA
131 CATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAAAATCAATTCACAA
*
76124963 TTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAAGTAAA
196 TTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAGGTAAA
76125028 GAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTTAAC
261 GAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTTAAC
*
76125093 AAAAACAGACTAAATGGGGTGTATTCCTAGATCATGCCAAAATAAATAAAAACATAATTAATTTG
326 AAAAACAGACTAAAAGGGGTGTATTCCTAGATCATGCCAAAATAAATAAAAACATAATTAATTTG
76125158 AAAACAAACA
391 AAAACAAACA
76125168 AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
1 AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
*
76125233 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTTATT
66 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATT
76125298 CATGGGATCTAGATTTCGGGTGTTACCACAAAAAAAACTTAACCGTTTAACAAAATCAATTCACA
131 CATGGGATCTAGATTTCGGGTGTTACCAC-AAAAAAACTTAACCGTTTAACAAAATCAATTCACA
76125363 ATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAGGTAA
195 ATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAGGTAA
*
76125428 AGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTCAA
260 AGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTTAA
*
76125493 CAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAATTT
325 CAAAAACAGACTAAAAGGGGTGTATTCCTAGATCATGCCAAAATAAATAAAAACATAATTAATTT
76125558 GAAAACAAACA
390 GAAAACAAACA
*
76125569 AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTAAAATACT
1 AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
* *
76125634 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATGATATAACACCCTCAACTCGACCTGATT
66 ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATT
* *
76125699 CATGGGATCTAGATTTCGAGTGTTACCACAAAAGAACTTAACCGTTTAACAAAATCAATTCACAA
131 CATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAAAATCAATTCACAA
* *
76125764 TTTCTTTCCTCTTTAAAACATTTCCTATGGCATTCCAATTGAAATGCTTAATATATGAAGGTAAA
196 TTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAGGTAAA
76125829 GAA
261 GAA
76125832 TGTGACACCC
Statistics
Matches: 1038, Mismatches: 25, Indels: 2
0.97 0.02 0.00
Matches are distributed among these distances:
400 648 0.62
401 390 0.38
ACGTcount: A:0.42, C:0.16, G:0.12, T:0.31
Consensus pattern (400 bp):
AATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACT
ATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATT
CATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAAAATCAATTCACAA
TTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAATATATGAAGGTAAA
GAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTTAAC
AAAAACAGACTAAAAGGGGTGTATTCCTAGATCATGCCAAAATAAATAAAAACATAATTAATTTG
AAAACAAACA
Found at i:76128532 original size:49 final size:49
Alignment explanation
Indices: 76128479--76129072 Score: 967
Period size: 49 Copynumber: 12.3 Consensus size: 49
76128469 GATTTTATGC
* * * * *
76128479 GATGAATGTGAATGTGTATATATATGAGATAAGGCCGAATGGTCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76128528 GATGAATGTGAAAGTGTATATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76128577 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76128626 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76128675 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAAT-GCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76128723 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76128772 GATGAATGTGAAAGTGTATATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76128821 GATGAATGTGAAAGTGTATATATATGTGATAAGGCCTAATGGCCGA--T
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76128868 GATGAATGTG-AAG-GTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76128915 GATGAATGTGAAA--GTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
* *
76128962 GATGAATGTG-AAG-GTGTATATATGTGATAAGGCCGAATGGCCAATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
* * * * *
76129009 GATGAATGTGAAA--GTGTATATATGTGATAGGGCCGAGTGGCCAACGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76129056 GATGGATGTGAAAGTGT
1 GATGAATGTGAAAGTGT
76129073 ACAAATGTGA
Statistics
Matches: 524, Mismatches: 13, Indels: 16
0.95 0.02 0.03
Matches are distributed among these distances:
45 30 0.06
46 5 0.01
47 151 0.29
48 52 0.10
49 286 0.55
ACGTcount: A:0.31, C:0.08, G:0.31, T:0.30
Consensus pattern (49 bp):
GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
Found at i:76130564 original size:40 final size:40
Alignment explanation
Indices: 76130498--76130809 Score: 525
Period size: 40 Copynumber: 7.8 Consensus size: 40
76130488 GAGAATTGAG
* * * *
76130498 AGTGATATATCCGGGCTAAATCCCGAAGAGCATTCGTGCT
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
76130538 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
76130578 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
*
76130618 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCCTGCT
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
76130658 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
76130698 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
* * *
76130738 AGTGATATAACCGGACTAAGTCCCGAAGAGCATTCGTGCT
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
* * *
76130778 AGTGATGTATCCGGGCTAGGTCCCGAAGAGCA
1 AGTGATGTATCCGGACTAAGTTCCGAAGAGCA
76130810 ATCATGCTGG
Statistics
Matches: 259, Mismatches: 13, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
40 259 1.00
ACGTcount: A:0.26, C:0.21, G:0.27, T:0.26
Consensus pattern (40 bp):
AGTGATGTATCCGGACTAAGTTCCGAAGAGCATTCGTGCT
Found at i:76134650 original size:47 final size:49
Alignment explanation
Indices: 76134535--76134999 Score: 750
Period size: 49 Copynumber: 9.7 Consensus size: 49
76134525 GATTTTATGC
* * * *
76134535 GATGAATGTGAATGTGTATATATATGAGATAAGGCCGAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76134584 GATGAATGTGAAAGTGTATATATATGTGATAA-GCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76134632 GATGAATGTGAAA-TGTATATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76134680 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76134729 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76134778 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGG-CGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76134826 GATGAATGTGAAAGTGTATATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
76134875 GATGAATGTG-AAG-GTGTATATATGTGATAAGGCCTAATGGCCGATGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
* * * * *
76134922 GATGAATGTGAAA--GTGTATATATGTGATAGGGCCGAGTGGCCAACGT
1 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
*
76134969 GATGGATGTGAAA--GTGTATATATGTGATAAG
1 GATGAATGTGAAAGTGTGTATATATGTGATAAG
76135000 TCCCGAAGGG
Statistics
Matches: 399, Mismatches: 13, Indels: 10
0.95 0.03 0.02
Matches are distributed among these distances:
47 119 0.30
48 109 0.27
49 171 0.43
ACGTcount: A:0.32, C:0.08, G:0.30, T:0.30
Consensus pattern (49 bp):
GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGT
Found at i:76134665 original size:96 final size:97
Alignment explanation
Indices: 76134535--76134999 Score: 746
Period size: 97 Copynumber: 4.8 Consensus size: 97
76134525 GATTTTATGC
* * *
76134535 GATGAATGTGAATGTGTATATATATGAGATAAGGCCGAATGGCCGATGTGATGAATGTGAAAGTG
1 GATGAATGTGAA-ATGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
*
76134600 TATATATATGTGATAA-GCCTAATGGCCGATGT
65 TGTATATATGTGATAAGGCCTAATGGCCGATGT
76134632 GATGAATGTGAAATGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGT
1 GATGAATGTGAAATGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGT
76134697 GTATATATGTGATAAGGCCTAATGGCCGATGT
66 GTATATATGTGATAAGGCCTAATGGCCGATGT
*
76134729 GATGAATGTGAAAGTGTGTATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
1 GATGAATGTGAAA-TGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
76134794 TGTATATATGTGATAAGGCCTAATGG-CGATGT
65 TGTATATATGTGATAAGGCCTAATGGCCGATGT
76134826 GATGAATGTGAAAGTGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTG-AAG-G
1 GATGAATGTGAAA-TGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTG
76134889 TGTATATATGTGATAAGGCCTAATGGCCGATGT
65 TGTATATATGTGATAAGGCCTAATGGCCGATGT
* * * * * * *
76134922 GATGAATGTGAAA-GTGTATATATGTGATAGGGCCGAGTGGCCAACGTGATGGATGTGAAA--GT
1 GATGAATGTGAAATGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGT
76134984 GTATATATGTGATAAG
66 GTATATATGTGATAAG
76135000 TCCCGAAGGG
Statistics
Matches: 351, Mismatches: 13, Indels: 11
0.94 0.03 0.03
Matches are distributed among these distances:
94 55 0.16
95 29 0.08
96 86 0.25
97 105 0.30
98 76 0.22
ACGTcount: A:0.32, C:0.08, G:0.30, T:0.30
Consensus pattern (97 bp):
GATGAATGTGAAATGTATATATATGTGATAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGT
GTATATATGTGATAAGGCCTAATGGCCGATGT
Found at i:76136697 original size:400 final size:400
Alignment explanation
Indices: 76135958--76138681 Score: 4968
Period size: 400 Copynumber: 6.8 Consensus size: 400
76135948 GGGGTGTTAC
* *
76135958 AAAGAAAATGCCCTACAATAGTTTATAATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
*
76136023 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAAGAAA-AAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76136087 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
*
76136152 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATTATGTAACACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCA
*
76136217 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAGAACTTAACCGTTTAACAA
261 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
76136282 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
326 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
76136347 ATATGAAGGT
391 ATATGAAGGT
76136357 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
* *
76136422 AACAAAAACAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
*
76136487 TTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
76136552 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCA
* * *
76136617 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTA-CACAAAAAAAACTTAACCATTTAAGA
261 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCAC-AAAAAAACTTAACCGTTTAACA
*
76136681 AAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTCAAATGCTTAA
325 AAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTT-A
76136746 TATATATGAAGGT
389 -ATATATGAAGGT
76136759 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
76136824 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76136889 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
* *
76136954 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAACGTAATACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCA
* * *
76137019 ACTTGACCTGATTCATGGGACCTAGATTTTGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
261 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
76137084 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
326 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
76137149 ATATGAAGGT
391 ATATGAAGGT
*
76137159 AAAGAAAATGCCCTACAATAGTTTATCGTGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
76137224 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
*
76137289 TTGAAAACAAACAATTTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAAGCTAGAATTT
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCT-AAAAGCTAGAATTT
*
76137354 ACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTA
195 ACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTC
* *
76137419 AACTCGGCCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAAACGTTTAACA
260 AACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACA
*
76137484 AAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTAGCATTCCAATTGAAATGCTTAA
325 AAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAA
76137549 TATATGAAGGT
390 TATATGAAGGT
* * *
76137560 AAAGAAAATGCCGTACAATAATTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
76137625 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76137690 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
* *
76137755 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATGATGTAATACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCA
*
76137820 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAGAACTTAACCGTTTAACAA
261 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
*
76137885 AATTAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
326 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
76137950 ATATGAAGGT
391 ATATGAAGGT
76137960 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
* * *
76138025 AACAAAAATAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
*
76138090 TTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAAGCTAGAATTT
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCT-AAAAGCTAGAATTT
*
76138155 ACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTT
195 ACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTC
* * *
76138220 AACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTA-CACAAAAAAACTTAACCATTTAAGA
260 AACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACA
* *
76138284 AAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCTAATTCAAATGCTTAA
325 AAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTT-A
76138349 TATATATGAAGGT
389 -ATATATGAAGGT
76138362 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
*
76138427 AACAAAAACAGACTAAAAGGGGCGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76138492 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
*
76138557 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAATACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCA
* *
76138622 ACTCGACCTGATTCATGGGACCTAGATTTTGGGTGTTACCACAAAAAAACTTAACCGTTT
261 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTT
76138682 TGTCGTAACC
Statistics
Matches: 2239, Mismatches: 76, Indels: 17
0.96 0.03 0.01
Matches are distributed among these distances:
399 112 0.05
400 918 0.41
401 616 0.28
402 590 0.26
403 3 0.00
ACGTcount: A:0.43, C:0.15, G:0.12, T:0.30
Consensus pattern (400 bp):
AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAACACCCTCA
ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
ATATGAAGGT
Found at i:76137856 original size:801 final size:802
Alignment explanation
Indices: 76135958--76138681 Score: 5087
Period size: 801 Copynumber: 3.4 Consensus size: 802
76135948 GGGGTGTTAC
*
76135958 AAAGAAAATGCCCTACAATAGTTTATAATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
*
76136023 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAAGAAA-AAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76136087 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
* *
76136152 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATTATGTAACACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAATACCCTCA
* *
76136217 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAGAACTTAACCGTTTAACAA
261 ACTCGACCTGATTCATGGGACCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
76136282 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
326 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
76136347 ATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGA
391 ATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGA
76136412 AAAGAAGTTTAACAAAAACAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAA
456 AAAGAAGTTTAACAAAAACAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAA
76136477 CATAATTAATTTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCT-AAAA
521 CATAATTAATTTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAA
76136541 GCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATG
586 GCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATG
*
76136606 TAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTACACAAAAAAAACTTAA
651 TAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTACAC-AAAAAAACTTAA
76136671 CCATTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTC
715 CCATTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTC
76136736 AAATGCTTAATATATATGAAGGT
780 AAATGCTTAATATATATGAAGGT
*
76136759 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
76136824 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76136889 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
*
76136954 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAACGTAATACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAATACCCTCA
* *
76137019 ACTTGACCTGATTCATGGGACCTAGATTTTGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
261 ACTCGACCTGATTCATGGGACCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
76137084 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
326 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
*
76137149 ATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCGTGTGAATCTAGATACAAATCTTTACGA
391 ATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGA
* *
76137214 AAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAA
456 AAAGAAGTTTAACAAAAACAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAA
* *
76137279 CATAATTAATTTGAAAACAAACAATTTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAA
521 CATAATTAATTTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAA
76137344 GCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATG
586 GCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATG
* *
76137409 TAACACCCTAAACTCGGCCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAAAACTTAA
651 TAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTA-CACAAAAAAACTTAA
* * * * *
76137474 ACGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTAGCATTCCAATTG
715 CCATTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTC
76137539 AAATGCTT-A-ATATATGAAGGT
780 AAATGCTTAATATATATGAAGGT
* *
76137560 AAAGAAAATGCCGTACAATAATTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
76137625 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76137690 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
*
76137755 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATGATGTAATACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAATACCCTCA
* *
76137820 ACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAAAGAACTTAACCGTTTAACAA
261 ACTCGACCTGATTCATGGGACCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
*
76137885 AATTAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
326 AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
76137950 ATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGA
391 ATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGA
*
76138015 AAAGAAGTTTAACAAAAATAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAA
456 AAAGAAGTTTAACAAAAACAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAA
76138080 CATAATTAATTTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAA
521 CATAATTAATTTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAA
76138145 GCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATG
586 GCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATG
*
76138210 TAACACCCTTAACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTACACAAAAAAACTTAAC
651 TAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTACACAAAAAAACTTAAC
*
76138275 CATTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCTAATTCA
716 CATTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTCA
76138340 AATGCTTAATATATATGAAGGT
781 AATGCTTAATATATATGAAGGT
*
76138362 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTT
1 AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
*
76138427 AACAAAAACAGACTAAAAGGGGCGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
66 AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
76138492 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
131 TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
76138557 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAATACCCTCA
196 CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAATACCCTCA
*
76138622 ACTCGACCTGATTCATGGGACCTAGATTTTGGGTGTTACCACAAAAAAACTTAACCGTTT
261 ACTCGACCTGATTCATGGGACCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTT
76138682 TGTCGTAACC
Statistics
Matches: 1862, Mismatches: 56, Indels: 9
0.97 0.03 0.00
Matches are distributed among these distances:
800 82 0.04
801 804 0.43
802 778 0.42
803 195 0.10
804 3 0.00
ACGTcount: A:0.43, C:0.15, G:0.12, T:0.30
Consensus pattern (802 bp):
AAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGAAAAGAAGTTC
AACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAATAAATAAAAACATAATTAAT
TTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAGCTAGAATTTA
CTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATGTAATACCCTCA
ACTCGACCTGATTCATGGGACCTAGATTTCGGGTGTTACCACAAAAAAACTTAACCGTTTAACAA
AATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGAAATGCTTAAT
ATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAAATCTTTACGA
AAAGAAGTTTAACAAAAACAGACTAAAAGGGGTATATTCCTAGATCATGCCAAAATAAATAAAAA
CATAATTAATTTGGAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACTAGCCTAAAAA
GCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGAGTTATAATG
TAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTTTTACACAAAAAAACTTAAC
CATTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTCA
AATGCTTAATATATATGAAGGT
Found at i:76139876 original size:3 final size:3
Alignment explanation
Indices: 76139863--76139947 Score: 63
Period size: 3 Copynumber: 28.0 Consensus size: 3
76139853 GAGGGCATAT
76139863 ATA AT- ATA ATA ATA AT- ATAA ATA ATA ATA TATA CATGA GA-A ATA
1 ATA ATA ATA ATA ATA ATA AT-A ATA ATA ATA -ATA -AT-A -ATA ATA
* *
76139907 ATA ATA ATA AT- ATAA ATA ATA GTA AAA ATA ATA A-A ATA ATA
1 ATA ATA ATA ATA AT-A ATA ATA ATA ATA ATA ATA ATA ATA ATA
76139948 CAACAAAGCT
Statistics
Matches: 67, Mismatches: 6, Indels: 18
0.74 0.07 0.20
Matches are distributed among these distances:
2 9 0.13
3 47 0.70
4 9 0.13
5 2 0.03
ACGTcount: A:0.65, C:0.01, G:0.04, T:0.31
Consensus pattern (3 bp):
ATA
Found at i:76139887 original size:12 final size:12
Alignment explanation
Indices: 76139863--76139945 Score: 73
Period size: 12 Copynumber: 6.8 Consensus size: 12
76139853 GAGGGCATAT
76139863 ATAATAT-AATA
1 ATAATATAAATA
76139874 ATAATATAAATA
1 ATAATATAAATA
76139886 ATAATATATACATGA
1 ATAATATA-A-AT-A
76139901 GA-AATA-ATAATA
1 -ATAATATA-AATA
76139913 ATAATATAAATA
1 ATAATATAAATA
* *
76139925 ATAGTAAAAATA
1 ATAATATAAATA
*
76139937 ATAAAATAA
1 ATAATATAA
76139946 TACAACAAAG
Statistics
Matches: 60, Mismatches: 5, Indels: 13
0.77 0.06 0.17
Matches are distributed among these distances:
11 8 0.13
12 37 0.62
13 4 0.07
14 5 0.08
15 5 0.08
16 1 0.02
ACGTcount: A:0.65, C:0.01, G:0.04, T:0.30
Consensus pattern (12 bp):
ATAATATAAATA
Found at i:76139907 original size:21 final size:18
Alignment explanation
Indices: 76139868--76139927 Score: 75
Period size: 18 Copynumber: 3.2 Consensus size: 18
76139858 CATATATAAT
*
76139868 ATAATAATAATATAAATA
1 ATAATAATAATAGAAATA
76139886 ATAATATATACATGAGAAATA
1 ATAATA-ATA-AT-AGAAATA
*
76139907 ATAATAATAATATAAATA
1 ATAATAATAATAGAAATA
76139925 ATA
1 ATA
76139928 GTAAAAATAA
Statistics
Matches: 37, Mismatches: 2, Indels: 6
0.82 0.04 0.13
Matches are distributed among these distances:
18 15 0.41
19 5 0.14
20 5 0.14
21 12 0.32
ACGTcount: A:0.63, C:0.02, G:0.03, T:0.32
Consensus pattern (18 bp):
ATAATAATAATAGAAATA
Found at i:76139936 original size:27 final size:27
Alignment explanation
Indices: 76139863--76139944 Score: 77
Period size: 25 Copynumber: 3.2 Consensus size: 27
76139853 GAGGGCATAT
* *
76139863 ATAATAT-AATAATAATATAAATAATA
1 ATAATATAAATAATAGTAAAAATAATA
* *
76139889 AT-ATATACAT--GAG-AAATAATAATA
1 ATAATATAAATAATAGTAAA-AATAATA
76139913 ATAATATAAATAATAGTAAAAATAATA
1 ATAATATAAATAATAGTAAAAATAATA
76139940 A-AATA
1 ATAATA
76139945 ATACAACAAA
Statistics
Matches: 44, Mismatches: 6, Indels: 12
0.71 0.10 0.19
Matches are distributed among these distances:
23 2 0.05
24 10 0.23
25 11 0.25
26 8 0.18
27 10 0.23
28 3 0.07
ACGTcount: A:0.65, C:0.01, G:0.04, T:0.30
Consensus pattern (27 bp):
ATAATATAAATAATAGTAAAAATAATA
Found at i:76140312 original size:18 final size:17
Alignment explanation
Indices: 76140286--76140319 Score: 50
Period size: 18 Copynumber: 1.9 Consensus size: 17
76140276 TCCAAAAAAC
*
76140286 AAAAAAAAACACCTCCA
1 AAAAAAAAAAACCTCCA
76140303 AAAAACAAAAAACCTCC
1 AAAAA-AAAAAACCTCC
76140320 CCCAAAACAA
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 5 0.33
18 10 0.67
ACGTcount: A:0.65, C:0.29, G:0.00, T:0.06
Consensus pattern (17 bp):
AAAAAAAAAAACCTCCA
Found at i:76140515 original size:4 final size:4
Alignment explanation
Indices: 76140506--76140532 Score: 54
Period size: 4 Copynumber: 6.8 Consensus size: 4
76140496 GGCCAAGGTT
76140506 TTTA TTTA TTTA TTTA TTTA TTTA TTT
1 TTTA TTTA TTTA TTTA TTTA TTTA TTT
76140533 TTTTGTGTTT
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 23 1.00
ACGTcount: A:0.22, C:0.00, G:0.00, T:0.78
Consensus pattern (4 bp):
TTTA
Found at i:76142076 original size:16 final size:16
Alignment explanation
Indices: 76142055--76142106 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76142045 AAAATAAATA
76142055 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76142071 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76142087 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76142103 AAAA
1 AAAA
76142107 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76142744 original size:398 final size:400
Alignment explanation
Indices: 76140654--76166599 Score: 47785
Period size: 399 Copynumber: 64.5 Consensus size: 400
76140644 GGGTCTTACA
76140654 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76140719 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCGTGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76140784 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
* *
76140849 TAAATAAAAACATAATTAATATGAAAACAAACAATTTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76140914 AGCCTAAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATG
261 AGCCT-AAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATG
*
76140979 AGTTATAATGTAACACCCTCAACTCGGCCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAA
325 AGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAA
*
76141044 AAAAACTTAAA
390 AAAAACTTAAC
76141055 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76141120 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
* *
76141185 ATCTTTATGAAAAGAAGTTCAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76141250 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
*
76141315 AGCCTAAACGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
* * *
76141380 GTTATAATATAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCATAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76141445 AAAACTTAAC
391 AAAACTTAAC
76141455 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76141520 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
*
76141585 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATCATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
*
76141650 TAAAGAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76141715 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76141780 GTTATAATGT-ACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76141844 AAAACTTAAC
391 AAAACTTAAC
*
76141854 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
* *
76141919 AATGCTTGATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76141984 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76142049 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76142114 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTA-GAGAA-TATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76142177 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76142242 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76142267 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76142332 AATGCTTAATATATGAAGGTAAAGAAAATG-CCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
*
76142396 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTACGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
*
76142461 TAAATAAAAACATAATTATTTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76142526 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76142591 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGA-CTAGATTTTGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76142655 AAAACTTAAC
391 AAAACTTAAC
76142665 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76142730 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCGTGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76142795 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76142860 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76142925 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
* *
76142990 GTTATAATGTAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCATAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76143055 AAAACTTAAC
391 AAAACTTAAC
76143065 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76143130 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
* *
76143195 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAATGGGGTGTATTCCTAGATCATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
*
76143260 TAAAGAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
*
76143325 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACAATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76143390 GTTATAATGTAACACCCTCAACTCGACCAGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCAC-AA
76143455 AAAAACTTAAC
390 AAAAACTTAAC
*
76143466 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76143531 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76143596 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76143661 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76143726 AATCTAAT-AAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76143790 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76143855 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
* *
76143880 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTCA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76143945 AATGCTTAATATATATGAAGGTAAAGAAAATACCCTACAATAGTTTATCATGTGAATCTAGATAC
66 AATGCTT-A-ATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATAC
*
76144010 AAATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGCTGTATTCCTAGATTATGCCAA
129 AAATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAA
76144075 AATAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAA
194 AATAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAA
76144140 CTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATAT
259 CTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATAT
* * * *
76144205 GAGTTATAACGTAATACCCTCAACTCGACCTGATTCATGGGACCTAGATTTTGGGTGTTACCACA
324 GAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACA
76144270 AAAAAACTTAAC
389 AAAAAACTTAAC
*
76144282 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76144347 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCGTGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
*
76144412 ATCTTTACGAAAAGAAGTTCAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76144477 TAAATAAAAACATAATTAATTT-AAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76144541 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76144606 GTTATAATGTAACACCCTCAACTCGACCAGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76144671 AAAACTTAAC
391 AAAACTTAAC
*
76144681 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76144746 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76144811 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76144876 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76144941 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
76145006 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76145070 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76145095 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76145160 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76145225 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAA-GGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76145289 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76145354 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
* *
76145419 GTTATAATGTAATACCCTCAACTCGACCTGATTCATGGGATCTAGATTTTGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76145484 AAAACTTAAC
391 AAAACTTAAC
*
76145494 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76145559 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76145624 ATCTTTACGAAAAGAAG-TTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
*
76145688 TAAATAAAAACATAATTAATTTAAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
*
76145753 AACCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
* *
76145818 GTTATAATGTAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCATAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76145883 AAAACTTAAC
391 AAAACTTAAC
76145893 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76145958 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAG-TT-TCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
*
76146021 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATCATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76146086 TAAA-AAAAACATAATTAATTTGAAAACAAAC-AATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76146149 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76146214 GTTATAATGTAACACCCTCAACTCGACC-GATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76146278 AAAACTTAAC
391 AAAACTTAAC
*
76146288 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76146353 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76146418 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76146483 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76146548 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76146613 TAATTTTAAATATGAGTTATAATGTAA-ACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76146677 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76146702 CG-TTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76146766 AATGCTTAATATATGAAGGTAAAGAAAATG-CCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76146830 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76146895 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76146960 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76147025 GTTATAATGTAACACCCTCAACTCGACCTAATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76147090 AAAACTTAAC
391 AAAACTTAAC
*
76147100 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76147165 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76147230 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76147295 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76147360 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76147425 GTTATAATGTAACACCCT-AACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTA-C-CAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76147487 AAAACTTAAC
391 AAAACTTAAC
76147497 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76147562 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76147627 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGA-TATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76147691 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76147755 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76147820 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76147885 AAAACTTAAC
391 AAAACTTAAC
*
76147895 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76147960 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76148025 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76148090 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76148155 AATCTAAT-AAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76148219 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76148284 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
* *
76148309 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTCA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76148374 AATGCTTAATATATATGAAGGTAAAGAAAATACCCTACAATAGTTTATCATGTGAATCTAGATAC
66 AATGCTT-A-ATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATAC
76148439 AAATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAA-GGGTGTATTCCTAGATTATGCCAA
129 AAATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAA
76148503 AATAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAA
194 AATAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAA
76148568 CTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATAT
259 CTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATAT
*
76148633 GAGTTATAATGTAA-ACCCTCAACTCGACCTGATTCATGGGATCTAGATTTTGGGTGTTACCACA
324 GAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACA
76148697 AAAAAACTTAAC
389 AAAAAACTTAAC
*
76148709 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76148774 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76148839 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76148904 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76148969 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76149034 GTTATAATGTAACACCCTCAACTCGACCGGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCAC-AA
76149099 AAAAACTTAAC
390 AAAAACTTAAC
*
76149110 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76149175 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76149240 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76149305 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76149370 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76149435 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76149500 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
* *
76149525 CGTTTAAGAAAATCATTTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76149590 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76149655 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAA-GGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76149719 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76149784 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76149849 GTTATAATGTAA-ACCCTCAACTCGACCTGATTCATGGGATCTAGATTTTGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76149913 AAAACTTAAC
391 AAAACTTAAC
*
76149923 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76149988 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76150053 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76150118 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76150183 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76150248 GTTATAATGTAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTA-C-CAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76150311 AAAACTTAAC
391 AAAACTTAAC
76150321 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76150386 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76150451 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGA-TATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76150515 TAAA-AAAAACATAATTAATTTGAAAACAAAC-AATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76150578 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76150643 GTTATAATGTAACACCCT-AACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76150707 AAAACTTAAC
391 AAAACTTAAC
76150717 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76150782 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCA--TGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76150845 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76150910 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76150975 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
76151040 TAATTTTAAATATGAGTTATAATGTAA-ACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76151103 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76151128 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76151193 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76151258 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76151323 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76151388 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76151453 GTTATAATGTAACACCCTCAACTCGACCTAATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76151518 AAAACTTAAC
391 AAAACTTAAC
*
76151528 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76151593 AATGCCTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76151658 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76151723 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76151788 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76151853 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76151918 AAAACTTAAC
391 AAAACTTAAC
76151928 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76151993 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76152058 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76152123 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76152187 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76152252 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76152317 AAAACTTAAC
391 AAAACTTAAC
76152327 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76152392 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76152457 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76152522 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76152587 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76152652 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-GGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76152716 AAAACTTAAC
391 AAAACTTAAC
*
76152726 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76152791 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76152856 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76152921 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76152986 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76153051 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76153116 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76153141 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76153206 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76153271 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76153336 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76153401 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76153466 GTTATAATGTAACACCCTCAACTCGACCTAATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76153531 AAAACTTAAC
391 AAAACTTAAC
*
76153541 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
* *
76153606 AATGCCTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTTAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76153671 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76153736 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76153801 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76153866 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTA-C-CAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76153929 AAAACTTAAC
391 AAAACTTAAC
76153939 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76154004 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76154069 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGA-TATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76154133 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76154197 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76154262 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76154327 AAAACTTAAC
391 AAAACTTAAC
*
76154337 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76154402 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76154467 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76154532 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76154597 AATCTAAT-AAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
76154661 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76154725 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76154750 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76154815 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76154880 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAA-GGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76154944 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76155009 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76155074 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-GGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76155138 AAAACTTAAC
391 AAAACTTAAC
*
76155148 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76155213 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76155278 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76155343 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76155408 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76155473 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76155538 AAAACTTAAC
391 AAAACTTAAC
76155548 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
* *
76155613 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATAAAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76155678 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76155743 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76155808 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
76155873 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76155937 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76155962 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76156027 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76156092 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76156157 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76156222 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
* * *
76156287 GTTATAATGTAACACCCTAAACTCGACCGGATTCATGGGATCTAGATTTTGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76156352 AAAACTTAAC
391 AAAACTTAAC
*
76156362 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76156427 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76156492 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76156557 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76156622 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76156687 GTTATAATGTAACACCCT-AACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCA-AAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76156750 AAAACTTAAC
391 AAAACTTAAC
76156760 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76156825 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76156890 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGA-TATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76156954 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76157018 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76157083 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76157148 AAAACTTAAC
391 AAAACTTAAC
76157158 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76157223 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76157288 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76157353 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76157418 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76157483 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76157548 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
* *
76157573 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCGATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76157638 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76157703 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76157768 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76157832 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76157897 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76157962 AAAACTTAAC
391 AAAACTTAAC
76157972 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76158037 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCA--TGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76158100 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76158165 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76158230 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
76158295 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76158359 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76158384 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76158449 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76158514 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAA-GGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76158578 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76158643 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76158708 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-GGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76158772 AAAACTTAAC
391 AAAACTTAAC
*
76158782 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76158847 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76158912 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76158977 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76159042 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76159107 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76159172 AAAACTTAAC
391 AAAACTTAAC
76159182 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76159247 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76159312 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
*
76159377 TAAATAAAAACATAAAAAACATAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAA
196 TAAATAAAAACAT----AA-TTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAA
76159442 AAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAA
256 AAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAA
76159507 TATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-GGGTGTTACC
321 TATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACC
76159571 ACAAAAAAACTTAAC
386 ACAAAAAAACTTAAC
*
76159586 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76159651 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76159716 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAA-GGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76159780 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76159845 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76159910 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTT-GGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76159974 AAAACTTAAC
391 AAAACTTAAC
*
76159984 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76160049 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76160114 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76160179 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76160244 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76160309 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCA-AAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76160373 AAAACTTAAC
391 AAAACTTAAC
76160383 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76160448 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76160513 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76160578 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76160642 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76160707 GTTATAATGTAACACCCT-AACTCGACCTGATTCATGGGATCTAGATTT-GGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76160770 AAAACTTAAC
391 AAAACTTAAC
76160780 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76160845 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76160910 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76160975 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76161040 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76161105 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76161170 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76161195 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76161260 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76161325 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76161390 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76161455 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76161520 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76161585 AAAACTTAAC
391 AAAACTTAAC
*
76161595 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76161660 AATGCCTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76161725 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76161790 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76161855 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76161920 GTTATAATGTAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCA-AAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76161984 AAAACTTAAC
391 AAAACTTAAC
76161994 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76162059 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76162124 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGA-TATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76162188 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76162252 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76162317 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76162382 AAAACTTAAC
391 AAAACTTAAC
*
76162392 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76162457 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76162522 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76162587 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76162652 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76162717 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76162782 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76162807 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76162872 AATGCTTAATATATGAAGGTAAAGAAAATG-CCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76162936 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76163001 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76163066 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76163131 GTTATAATGTAACACCCTCAACTCGACCTAATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76163196 AAAACTTAAC
391 AAAACTTAAC
*
76163206 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76163271 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76163336 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76163401 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76163466 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76163531 GTTATAATGTAACACCCTAAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCA-AAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76163595 AAAACTTAAC
391 AAAACTTAAC
76163605 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76163670 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76163735 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGA-TATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76163799 TAAA-AAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76163863 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76163928 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76163993 AAAACTTAAC
391 AAAACTTAAC
*
76164003 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76164068 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76164133 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76164198 TAAATAAAAACATAATAATTTGAAAACATAATAATTTGAAAACAAACAAATTTGAAAAGTTATAA
196 TAAATAAAAAC------A--T----A-AT--TAATTTGAAAACAAACAAATTTGAAAAGTTATAA
76164263 AATCTAAT-AAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
246 AATCTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAA
*
76164327 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTT
311 TAATTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTC
76164392 GGGTGTTACCACAAAAAAACTTAAC
376 GGGTGTTACCACAAAAAAACTTAAC
*
76164417 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76164482 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76164547 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAA-GGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76164611 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76164676 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76164741 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCA-AAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76164805 AAAACTTAAC
391 AAAACTTAAC
76164815 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76164880 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATATGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76164945 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76165010 TAAAAAAACATAATAATTTAAACATAA-TAATTTGAAAACAAACAAATTTGAAAAGTTATAAAAT
196 T--------A-AATAA---AAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAAT
76165074 CTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAA
249 CTAATAAAAACTAGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAA
76165139 TTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGG
314 TTTTAAATATGAGTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGG
76165204 TGTTACCACAAAAAAACTTAAC
379 TGTTACCACAAAAAAACTTAAC
76165226 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76165291 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76165356 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76165421 TAAATAAAAACATAATTAATTTGAAAACAAAC-AATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
* *
76165485 AGCCTAAAAGCTAGAATTTACTCCTGAAATATTGTGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76165550 GTTATAATGTAACA-CCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76165614 AAAACTTAAC
391 AAAACTTAAC
*
76165624 CGTTTAAGAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
76165689 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
76165754 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATT-TGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76165818 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCT-ATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76165882 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAAT-ATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
76165946 GTTATAATGTAACACCCT-AACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTT-CCACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76166009 AAAACTTAAC
391 AAAACTTAAC
*
76166019 CATTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
*
76166084 AATGATTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
* * * *
76166149 ATCTTTACGAAAAGAAGTTTAGCAAAAATAGACTAAAAGGGCTATATTCCTAGATTATGCCAAAA
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
76166214 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
196 TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
76166279 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
261 AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
*
76166344 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACAACAAA
326 GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
76166409 AAAACTTAAC
391 AAAACTTAAC
76166419 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
1 CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
* * *
76166484 AATGCTTAATATATGAAGGTAAGGAAAATGCCTTACAATAGTTTATCATGTGAATCTAGAAACAA
66 AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
* *
76166549 ATCTTTACGAAAAAAAGTTTAACAAAAATAGACTAAAAGGGGTGTATTCCT
131 ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCT
76166600 TGGTTATGGA
Statistics
Matches: 24987, Mismatches: 229, Indels: 659
0.97 0.01 0.03
Matches are distributed among these distances:
394 108 0.00
395 619 0.02
396 803 0.03
397 1540 0.06
398 4179 0.17
399 5120 0.20
400 4825 0.19
401 828 0.03
402 230 0.01
403 45 0.00
404 201 0.01
405 170 0.01
406 16 0.00
407 13 0.00
408 17 0.00
409 7 0.00
410 179 0.01
411 383 0.02
412 576 0.02
413 983 0.04
414 1790 0.07
415 1916 0.08
416 439 0.02
ACGTcount: A:0.43, C:0.15, G:0.12, T:0.31
Consensus pattern (400 bp):
CGTTTAACAAAATCAATTCACAATTTCTTTCTTCTTTAAAACATTTCCTGTGGCATTCCAATTGA
AATGCTTAATATATGAAGGTAAAGAAAATGCCCTACAATAGTTTATCATGTGAATCTAGATACAA
ATCTTTACGAAAAGAAGTTTAACAAAAACAGACTAAAAGGGGTGTATTCCTAGATTATGCCAAAA
TAAATAAAAACATAATTAATTTGAAAACAAACAAATTTGAAAAGTTATAAAATCTAATAAAAACT
AGCCTAAAAGCTAGAATTTACTCCTGAAATACTATGAGAACTATTTTAAATAATTTTAAATATGA
GTTATAATGTAACACCCTCAACTCGACCTGATTCATGGGATCTAGATTTCGGGTGTTACCACAAA
AAAACTTAAC
Found at i:76143688 original size:16 final size:16
Alignment explanation
Indices: 76143667--76143718 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76143657 AAAATAAATA
76143667 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76143683 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76143699 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76143715 AAAA
1 AAAA
76143719 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76144903 original size:16 final size:16
Alignment explanation
Indices: 76144882--76144933 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76144872 AAAATAAATA
76144882 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76144898 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76144914 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76144930 AAAA
1 AAAA
76144934 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76146510 original size:16 final size:16
Alignment explanation
Indices: 76146489--76146540 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76146479 AAAATAAATA
76146489 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76146505 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76146521 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76146537 AAAA
1 AAAA
76146541 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76148117 original size:16 final size:16
Alignment explanation
Indices: 76148096--76148147 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76148086 AAAATAAATA
76148096 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76148112 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76148128 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76148144 AAAA
1 AAAA
76148148 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76149332 original size:16 final size:16
Alignment explanation
Indices: 76149311--76149362 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76149301 AAAATAAATA
76149311 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76149327 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76149343 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76149359 AAAA
1 AAAA
76149363 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76150937 original size:16 final size:16
Alignment explanation
Indices: 76150916--76150967 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76150906 AAAATAAATA
76150916 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76150932 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76150948 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76150964 AAAA
1 AAAA
76150968 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76152948 original size:16 final size:16
Alignment explanation
Indices: 76152927--76152978 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76152917 AAAATAAATA
76152927 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76152943 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76152959 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76152975 AAAA
1 AAAA
76152979 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76154559 original size:16 final size:16
Alignment explanation
Indices: 76154538--76154589 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76154528 AAAATAAATA
76154538 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76154554 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76154570 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76154586 AAAA
1 AAAA
76154590 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76155770 original size:16 final size:16
Alignment explanation
Indices: 76155749--76155800 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76155739 AAAATAAATA
76155749 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76155765 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76155781 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76155797 AAAA
1 AAAA
76155801 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76157380 original size:16 final size:16
Alignment explanation
Indices: 76157359--76157410 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76157349 AAAATAAATA
76157359 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76157375 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76157391 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76157407 AAAA
1 AAAA
76157411 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76158192 original size:16 final size:16
Alignment explanation
Indices: 76158171--76158222 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76158161 AAAATAAATA
76158171 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76158187 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76158203 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76158219 AAAA
1 AAAA
76158223 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76159420 original size:16 final size:17
Alignment explanation
Indices: 76159393--76159424 Score: 57
Period size: 16 Copynumber: 1.9 Consensus size: 17
76159383 AAAACATAAA
76159393 AAACATAATTTGAAAAC
1 AAACATAATTTGAAAAC
76159410 AAACA-AATTTGAAAA
1 AAACATAATTTGAAAA
76159425 GTTATAAAAT
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
16 10 0.67
17 5 0.33
ACGTcount: A:0.62, C:0.09, G:0.06, T:0.22
Consensus pattern (17 bp):
AAACATAATTTGAAAAC
Found at i:76161002 original size:16 final size:16
Alignment explanation
Indices: 76160981--76161032 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76160971 AAAATAAATA
76160981 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76160997 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76161013 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76161029 AAAA
1 AAAA
76161033 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76162614 original size:16 final size:16
Alignment explanation
Indices: 76162593--76162644 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76162583 AAAATAAATA
76162593 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76162609 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76162625 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76162641 AAAA
1 AAAA
76162645 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76164225 original size:16 final size:16
Alignment explanation
Indices: 76164204--76164255 Score: 79
Period size: 16 Copynumber: 3.2 Consensus size: 16
76164194 AAAATAAATA
76164204 AAAACATAATAATTTG
1 AAAACATAATAATTTG
76164220 AAAACATAATAATTTG
1 AAAACATAATAATTTG
*
76164236 AAAACA-AACAAATTTG
1 AAAACATAA-TAATTTG
76164252 AAAA
1 AAAA
76164256 GTTATAAAAT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
15 2 0.06
16 32 0.94
ACGTcount: A:0.62, C:0.08, G:0.06, T:0.25
Consensus pattern (16 bp):
AAAACATAATAATTTG
Found at i:76165034 original size:14 final size:14
Alignment explanation
Indices: 76165015--76165042 Score: 56
Period size: 14 Copynumber: 2.0 Consensus size: 14
76165005 CAAAATAAAA
76165015 AAACATAATAATTT
1 AAACATAATAATTT
76165029 AAACATAATAATTT
1 AAACATAATAATTT
76165043 GAAAACAAAC
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 14 1.00
ACGTcount: A:0.57, C:0.07, G:0.00, T:0.36
Consensus pattern (14 bp):
AAACATAATAATTT
Found at i:76166707 original size:13 final size:13
Alignment explanation
Indices: 76166689--76166713 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
76166679 TGGTCATCAT
76166689 GGTGTGAACACAA
1 GGTGTGAACACAA
76166702 GGTGTGAACACA
1 GGTGTGAACACA
76166714 TGATCAATAC
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.32, T:0.16
Consensus pattern (13 bp):
GGTGTGAACACAA
Found at i:76167551 original size:12 final size:11
Alignment explanation
Indices: 76167534--76167563 Score: 51
Period size: 11 Copynumber: 2.7 Consensus size: 11
76167524 ATACAAGTTT
76167534 AAAAAAAATTC
1 AAAAAAAATTC
*
76167545 AAAAAAAATTG
1 AAAAAAAATTC
76167556 AAAAAAAA
1 AAAAAAAA
76167564 GGGTGTTGTA
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
11 18 1.00
ACGTcount: A:0.80, C:0.03, G:0.03, T:0.13
Consensus pattern (11 bp):
AAAAAAAATTC
Found at i:76168457 original size:5 final size:5
Alignment explanation
Indices: 76168447--76168502 Score: 53
Period size: 5 Copynumber: 11.0 Consensus size: 5
76168437 AAGAGAAAAC
* *
76168447 AAAGA AAAGA AAAAA AAAGCA AAAGA AGA-A AAAGA AAATGA AATA-A
1 AAAGA AAAGA AAAGA AAAG-A AAAGA AAAGA AAAGA AAA-GA AA-AGA
76168493 AAAGA AAAGA
1 AAAGA AAAGA
76168503 GAGGCAAGAG
Statistics
Matches: 42, Mismatches: 4, Indels: 10
0.75 0.07 0.18
Matches are distributed among these distances:
4 4 0.10
5 28 0.67
6 9 0.21
7 1 0.02
ACGTcount: A:0.79, C:0.02, G:0.16, T:0.04
Consensus pattern (5 bp):
AAAGA
Found at i:76168461 original size:16 final size:15
Alignment explanation
Indices: 76168436--76168502 Score: 73
Period size: 16 Copynumber: 4.3 Consensus size: 15
76168426 ACATTCTTGT
*
76168436 AAAGAGAAAACAAAGA
1 AAAGA-AAAAAAAAGA
76168452 AAAGAAAAAAAAAGCA
1 AAAGAAAAAAAAAG-A
*
76168468 AAAG-AAGAAAAAGA
1 AAAGAAAAAAAAAGA
*
76168482 AAATGAAATAAAAAGA
1 AAA-GAAAAAAAAAGA
76168498 AAAGA
1 AAAGA
76168503 GAGGCAAGAG
Statistics
Matches: 45, Mismatches: 3, Indels: 7
0.82 0.05 0.13
Matches are distributed among these distances:
14 4 0.09
15 19 0.42
16 22 0.49
ACGTcount: A:0.78, C:0.03, G:0.16, T:0.03
Consensus pattern (15 bp):
AAAGAAAAAAAAAGA
Found at i:76168571 original size:12 final size:12
Alignment explanation
Indices: 76168550--76168580 Score: 53
Period size: 12 Copynumber: 2.6 Consensus size: 12
76168540 TTGAGAGAAC
*
76168550 TTGAAGAAGCCT
1 TTGAAAAAGCCT
76168562 TTGAAAAAGCCT
1 TTGAAAAAGCCT
76168574 TTGAAAA
1 TTGAAAA
76168581 GCAAAAGGAA
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.42, C:0.13, G:0.19, T:0.26
Consensus pattern (12 bp):
TTGAAAAAGCCT
Found at i:76168604 original size:18 final size:18
Alignment explanation
Indices: 76168577--76168632 Score: 51
Period size: 18 Copynumber: 3.1 Consensus size: 18
76168567 AAAGCCTTTG
*
76168577 AAAAGCAAAAGGAAAATGA
1 AAAAG-AAAACGAAAATGA
* * *
76168596 AAAAGAAAATGAGATTGA
1 AAAAGAAAACGAAAATGA
*
76168614 AAAAGAGAACGAAAA-GA
1 AAAAGAAAACGAAAATGA
76168631 AA
1 AA
76168633 TTTGAGAGTG
Statistics
Matches: 30, Mismatches: 7, Indels: 2
0.77 0.18 0.05
Matches are distributed among these distances:
17 4 0.13
18 21 0.70
19 5 0.17
ACGTcount: A:0.68, C:0.04, G:0.21, T:0.07
Consensus pattern (18 bp):
AAAAGAAAACGAAAATGA
Found at i:76168628 original size:30 final size:31
Alignment explanation
Indices: 76168594--76168664 Score: 85
Period size: 30 Copynumber: 2.4 Consensus size: 31
76168584 AAAGGAAAAT
*
76168594 GAAAAAGAAA-ATGAGATTGAAAAAG-AGAAC
1 GAAAAAGAAATATGAGAGTGAAAAAGAAG-AC
* *
76168624 G-AAAAGAAATTTGAGAGTGAAAAAGAAGAT
1 GAAAAAGAAATATGAGAGTGAAAAAGAAGAC
76168654 GAAAAAGAAAT
1 GAAAAAGAAAT
76168665 TGAAACAAAA
Statistics
Matches: 35, Mismatches: 3, Indels: 5
0.81 0.07 0.12
Matches are distributed among these distances:
29 8 0.23
30 16 0.46
31 11 0.31
ACGTcount: A:0.62, C:0.01, G:0.24, T:0.13
Consensus pattern (31 bp):
GAAAAAGAAATATGAGAGTGAAAAAGAAGAC
Found at i:76170500 original size:27 final size:27
Alignment explanation
Indices: 76170470--76170695 Score: 240
Period size: 27 Copynumber: 8.4 Consensus size: 27
76170460 GGGGCAAAAT
* * *
76170470 GGTAATTTTACCCCACAAGGGTATCTC
1 GGTAATTTTACCCTACAGGGGTATTTC
* *
76170497 GGTAATTTCACCCTACAGGGGTATTTT
1 GGTAATTTTACCCTACAGGGGTATTTC
* *
76170524 AGTAATTCTACCCTACAGGGGTATTTC
1 GGTAATTTTACCCTACAGGGGTATTTC
*
76170551 GGTAATTTTACCCTATAGGGGTATTTC
1 GGTAATTTTACCCTACAGGGGTATTTC
* *
76170578 GGTAATTCTACCCTATAGGGGTATTTC
1 GGTAATTTTACCCTACAGGGGTATTTC
* *
76170605 GGTAATTCTACCCTACAGGGGTATTTT
1 GGTAATTTTACCCTACAGGGGTATTTC
* ** * *
76170632 GGTAATTTCA-CAAATTAGGGGTATTTT
1 GGTAATTTTACCCTA-CAGGGGTATTTC
** *
76170659 GGTAATTTTA-CAAATCAGGGGTATTTT
1 GGTAATTTTACCCTA-CAGGGGTATTTC
76170686 GGTAATTTTA
1 GGTAATTTTA
76170696 TTGATCGAGG
Statistics
Matches: 176, Mismatches: 22, Indels: 2
0.88 0.11 0.01
Matches are distributed among these distances:
26 2 0.01
27 174 0.99
ACGTcount: A:0.25, C:0.16, G:0.21, T:0.38
Consensus pattern (27 bp):
GGTAATTTTACCCTACAGGGGTATTTC
Found at i:76170707 original size:27 final size:27
Alignment explanation
Indices: 76170512--76170748 Score: 160
Period size: 27 Copynumber: 8.8 Consensus size: 27
76170502 TTTCACCCTA
* * **
76170512 CAGGGGTATTTTAGTAATTCTAC-CCT
1 CAGGGGTATTTTGGTAATTTTACAAAT
* **
76170538 ACAGGGGTATTTCGGTAATTTTACCCTAT
1 -CAGGGGTATTTTGGTAATTTTA-CAAAT
* * **
76170567 -AGGGGTATTTCGGTAATTCTACCCTAT
1 CAGGGGTATTTTGGTAATTTTA-CAAAT
* * **
76170594 -AGGGGTATTTCGGTAATTCTAC-CCT
1 CAGGGGTATTTTGGTAATTTTACAAAT
*
76170619 ACAGGGGTATTTTGGTAATTTCACAAAT
1 -CAGGGGTATTTTGGTAATTTTACAAAT
*
76170647 TAGGGGTATTTTGGTAATTTTACAAAT
1 CAGGGGTATTTTGGTAATTTTACAAAT
***
76170674 CAGGGGTATTTTGGTAATTTTATTGAT
1 CAGGGGTATTTTGGTAATTTTACAAAT
** *
76170701 C-GAGGGTATTTTGGTAATTTTGTAAAC
1 CAG-GGGTATTTTGGTAATTTTACAAAT
* **
76170728 CAAGGGTATTTCAGTAATTTT
1 CAGGGGTATTTTGGTAATTTT
76170749 GTAAATCGAG
Statistics
Matches: 177, Mismatches: 26, Indels: 14
0.82 0.12 0.06
Matches are distributed among these distances:
25 1 0.01
26 2 0.01
27 171 0.97
28 2 0.01
29 1 0.01
ACGTcount: A:0.25, C:0.12, G:0.22, T:0.40
Consensus pattern (27 bp):
CAGGGGTATTTTGGTAATTTTACAAAT
Found at i:76170749 original size:27 final size:27
Alignment explanation
Indices: 76170703--76170762 Score: 84
Period size: 27 Copynumber: 2.2 Consensus size: 27
76170693 TTATTGATCG
**
76170703 AGGGTATTTTGGTAATTTTGTAAACCA
1 AGGGTATTTCAGTAATTTTGTAAACCA
* *
76170730 AGGGTATTTCAGTAATTTTGTAAATCG
1 AGGGTATTTCAGTAATTTTGTAAACCA
76170757 AGGGTA
1 AGGGTA
76170763 AAATGGTAAT
Statistics
Matches: 29, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
27 29 1.00
ACGTcount: A:0.30, C:0.07, G:0.25, T:0.38
Consensus pattern (27 bp):
AGGGTATTTCAGTAATTTTGTAAACCA
Found at i:76170770 original size:54 final size:53
Alignment explanation
Indices: 76170658--76170843 Score: 165
Period size: 54 Copynumber: 3.5 Consensus size: 53
76170648 AGGGGTATTT
* * * ** ***
76170658 TGGTAATTTTACAAATCAGGGGTATTTTGGTAATTTTATTGATCGAGGGTATTT
1 TGGTAATTTTATAAATCAAGGGTA-TTTGGTAATTTTGTAAATCGAGGGTAAAA
* * *
76170712 TGGTAATTTTGTAAACCAAGGGTATTTCAGTAATTTTGTAAATCGAGGGTAAAA
1 TGGTAATTTTATAAATCAAGGGTATTT-GGTAATTTTGTAAATCGAGGGTAAAA
* ** ** *
76170766 TGGTAATTCTATAAATTGAGGGTAAAATGGTAATTCTGTAAATCGAGGGTAAAA
1 TGGTAATTTTATAAATCAAGGGT-ATTTGGTAATTTTGTAAATCGAGGGTAAAA
* * *
76170820 CGGTAATTCTATAAATCGAGGGTA
1 TGGTAATTTTATAAATCAAGGGTA
76170844 AAATGGTAAT
Statistics
Matches: 108, Mismatches: 22, Indels: 5
0.80 0.16 0.04
Matches are distributed among these distances:
53 4 0.04
54 102 0.94
55 2 0.02
ACGTcount: A:0.33, C:0.07, G:0.24, T:0.36
Consensus pattern (53 bp):
TGGTAATTTTATAAATCAAGGGTATTTGGTAATTTTGTAAATCGAGGGTAAAA
Found at i:76170770 original size:81 final size:81
Alignment explanation
Indices: 76170685--76170858 Score: 204
Period size: 81 Copynumber: 2.1 Consensus size: 81
76170675 AGGGGTATTT
* ** *** * *** * *
76170685 TGGTAATTTTATTGATCGAGGGTATTTTGGTAATTTTGTAAACCAAGGGTATTTCAGTAATTTTG
1 TGGTAATTCTATAAATCGAGGGTAAAATGGTAATTCTGTAAACCAAGGGTAAAACAGTAATTCTA
76170750 TAAATCGAGGGTAAAA
66 TAAATCGAGGGTAAAA
* * * *
76170766 TGGTAATTCTATAAATTGAGGGTAAAATGGTAATTCTGTAAATCGAGGGTAAAACGGTAATTCTA
1 TGGTAATTCTATAAATCGAGGGTAAAATGGTAATTCTGTAAACCAAGGGTAAAACAGTAATTCTA
76170831 TAAATCGAGGGTAAAA
66 TAAATCGAGGGTAAAA
76170847 TGGTAATTCTAT
1 TGGTAATTCTAT
76170859 CTTATTTCGG
Statistics
Matches: 77, Mismatches: 16, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
81 77 1.00
ACGTcount: A:0.34, C:0.07, G:0.23, T:0.36
Consensus pattern (81 bp):
TGGTAATTCTATAAATCGAGGGTAAAATGGTAATTCTGTAAACCAAGGGTAAAACAGTAATTCTA
TAAATCGAGGGTAAAA
Found at i:76170771 original size:27 final size:27
Alignment explanation
Indices: 76170741--76170858 Score: 191
Period size: 27 Copynumber: 4.4 Consensus size: 27
76170731 GGGTATTTCA
* *
76170741 GTAATTTTGTAAATCGAGGGTAAAATG
1 GTAATTCTATAAATCGAGGGTAAAATG
*
76170768 GTAATTCTATAAATTGAGGGTAAAATG
1 GTAATTCTATAAATCGAGGGTAAAATG
* *
76170795 GTAATTCTGTAAATCGAGGGTAAAACG
1 GTAATTCTATAAATCGAGGGTAAAATG
76170822 GTAATTCTATAAATCGAGGGTAAAATG
1 GTAATTCTATAAATCGAGGGTAAAATG
76170849 GTAATTCTAT
1 GTAATTCTAT
76170859 CTTATTTCGG
Statistics
Matches: 83, Mismatches: 8, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
27 83 1.00
ACGTcount: A:0.38, C:0.07, G:0.23, T:0.32
Consensus pattern (27 bp):
GTAATTCTATAAATCGAGGGTAAAATG
Found at i:76170891 original size:27 final size:27
Alignment explanation
Indices: 76170861--76170955 Score: 120
Period size: 27 Copynumber: 3.5 Consensus size: 27
76170851 AATTCTATCT
*
76170861 TATTTCGGTAATTTTACAAATCGAGGA
1 TATTTCGGTAATTTTACAAATCGAGGG
* * *
76170888 TATTTGGGTAATTTTATAAATCGGGGG
1 TATTTCGGTAATTTTACAAATCGAGGG
*
76170915 TACTTT-GGTAATTTTACAAGTCGAGGG
1 TA-TTTCGGTAATTTTACAAATCGAGGG
*
76170942 TATTTCAGTAATTT
1 TATTTCGGTAATTT
76170956 GGTAAACTAA
Statistics
Matches: 58, Mismatches: 8, Indels: 4
0.83 0.11 0.06
Matches are distributed among these distances:
26 3 0.05
27 52 0.90
28 3 0.05
ACGTcount: A:0.28, C:0.08, G:0.22, T:0.41
Consensus pattern (27 bp):
TATTTCGGTAATTTTACAAATCGAGGG
Found at i:76176704 original size:40 final size:40
Alignment explanation
Indices: 76176611--76176827 Score: 314
Period size: 40 Copynumber: 5.5 Consensus size: 40
76176601 AAGCCAAGTA
* * * *
76176611 CCTTCGGGAGTTA-ACCGGATATAACT-ACTCGCTC-AATG
1 CCTTCGGGACTTAGCCCGGATAT-AGTAACTCGCACAAATG
* * *
76176649 CCTTCGGGACATAGCCCGGATATAGTAACTCGCACCATTG
1 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAATG
* *
76176689 CCTTCGGGACTTAGCCCGGATATAGTAACTTGCATAAATG
1 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAATG
*
76176729 CCTTTGGGACTTAGCCCGGATATAGTAACTCGCACAAATG
1 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAATG
76176769 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAATG
1 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAATG
76176809 CCTTCGGGACTTAGCCCGG
1 CCTTCGGGACTTAGCCCGG
76176828 TTATCATCCA
Statistics
Matches: 161, Mismatches: 15, Indels: 4
0.89 0.08 0.02
Matches are distributed among these distances:
38 13 0.08
39 15 0.09
40 133 0.83
ACGTcount: A:0.25, C:0.27, G:0.23, T:0.24
Consensus pattern (40 bp):
CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAATG
Found at i:76179079 original size:44 final size:43
Alignment explanation
Indices: 76178941--76179097 Score: 160
Period size: 43 Copynumber: 3.7 Consensus size: 43
76178931 AACATATACA
* *
76178941 ATGCCAACGTCCCAGACGT-AGTCTTACATGT-AATCAAACATCG
1 ATGCCAATGTCCCAGACATGA-TCTTACATGTAAATCAAA-ATCG
* * * * *
76178984 ATGCCACTGTCCTAAACAGGGTCTTACATG-AAATC-AAATACG
1 ATGCCAATGTCCCAGACATGATCTTACATGTAAATCAAAAT-CG
*
76179026 ATGCCAATGTCCCAGACATGATCTTACATGTAAAACATAAATCG
1 ATGCCAATGTCCCAGACATGATCTTACATGTAAATCA-AAATCG
* *
76179070 ATGCCAATGTCCCAGACGTGGTCTTACA
1 ATGCCAATGTCCCAGACATGATCTTACA
76179098 CAGAAACACA
Statistics
Matches: 93, Mismatches: 15, Indels: 11
0.78 0.13 0.09
Matches are distributed among these distances:
41 2 0.02
42 29 0.31
43 30 0.32
44 28 0.30
45 4 0.04
ACGTcount: A:0.34, C:0.25, G:0.17, T:0.24
Consensus pattern (43 bp):
ATGCCAATGTCCCAGACATGATCTTACATGTAAATCAAAATCG
Found at i:76184462 original size:54 final size:54
Alignment explanation
Indices: 76184403--76184523 Score: 152
Period size: 54 Copynumber: 2.2 Consensus size: 54
76184393 CTATACCGTC
* * **
76184403 AAGGCATTCCTTTCAAATTTTACCACAAAAGCATTCCTTTCGTATTTTGCCACA
1 AAGGCATTCCTTTCAAATATTACCACAAAAGCATTCCTTTCATAAATTGCCACA
* * * * * *
76184457 AAGGCATTCCTTCCATATATTGCCACAAATGCGTTCCTTTCATAAATTGTCACA
1 AAGGCATTCCTTTCAAATATTACCACAAAAGCATTCCTTTCATAAATTGCCACA
76184511 AAGGCATTCCTTT
1 AAGGCATTCCTTT
76184524 TATAACATTT
Statistics
Matches: 56, Mismatches: 11, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
54 56 1.00
ACGTcount: A:0.29, C:0.26, G:0.11, T:0.35
Consensus pattern (54 bp):
AAGGCATTCCTTTCAAATATTACCACAAAAGCATTCCTTTCATAAATTGCCACA
Found at i:76184528 original size:27 final size:27
Alignment explanation
Indices: 76184403--76184528 Score: 128
Period size: 27 Copynumber: 4.7 Consensus size: 27
76184393 CTATACCGTC
* *
76184403 AAGGCATTCCTTTCA-AATTTTACCACA
1 AAGGCATTCCTTTCATAA-ATTGCCACA
* * **
76184430 AAAGCATTCCTTTCGTATTTTGCCACA
1 AAGGCATTCCTTTCATAAATTGCCACA
* *
76184457 AAGGCATTCCTTCCATATATTGCCACA
1 AAGGCATTCCTTTCATAAATTGCCACA
* * *
76184484 AATGCGTTCCTTTCATAAATTGTCACA
1 AAGGCATTCCTTTCATAAATTGCCACA
*
76184511 AAGGCATTCCTTTTATAA
1 AAGGCATTCCTTTCATAA
76184529 CATTTTTACG
Statistics
Matches: 82, Mismatches: 16, Indels: 2
0.82 0.16 0.02
Matches are distributed among these distances:
27 81 0.99
28 1 0.01
ACGTcount: A:0.30, C:0.25, G:0.10, T:0.35
Consensus pattern (27 bp):
AAGGCATTCCTTTCATAAATTGCCACA
Found at i:76188517 original size:2 final size:2
Alignment explanation
Indices: 76188510--76188537 Score: 56
Period size: 2 Copynumber: 14.0 Consensus size: 2
76188500 AATGGTATGC
76188510 TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA
76188538 GTTAAATTTG
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 26 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:76194804 original size:40 final size:40
Alignment explanation
Indices: 76194549--76194806 Score: 328
Period size: 40 Copynumber: 6.5 Consensus size: 40
76194539 AAGCCAAGTA
* * *
76194549 CCTTCGGGATTTA-ACCGGATATAGCT-ACTCGCTCGAA-TG
1 CCTTCGGGACTTAGCCCGGATATAG-TAACTCGCAC-AACTG
** * *
76194588 CCTTCGGGA-TATAGCCTAGATATAGTAACTCGTACAATTG
1 CCTTCGGGACT-TAGCCCGGATATAGTAACTCGCACAACTG
*
76194628 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAATTG
1 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAACTG
*
76194668 CCTTCGGGACTTAGCCCGAATATAGTAACTCGCACAACTG
1 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAACTG
76194708 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAACTG
1 CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAACTG
* * * *
76194748 CCTTCGGGACTTAGCCCGGA-ACTAGTAATTAGCGCAAATG
1 CCTTCGGGACTTAGCCCGGATA-TAGTAACTCGCACAACTG
76194788 CCTTCGGGACTTAGCCCGG
1 CCTTCGGGACTTAGCCCGG
76194807 TTATCGTCTG
Statistics
Matches: 198, Mismatches: 15, Indels: 11
0.88 0.07 0.05
Matches are distributed among these distances:
38 1 0.01
39 15 0.08
40 181 0.91
41 1 0.01
ACGTcount: A:0.25, C:0.27, G:0.23, T:0.25
Consensus pattern (40 bp):
CCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAACTG
Found at i:76199732 original size:37 final size:37
Alignment explanation
Indices: 76199669--76199814 Score: 220
Period size: 37 Copynumber: 3.9 Consensus size: 37
76199659 AGCTCAGATG
* * *
76199669 AAATCTCCACACGAAGTTATCTGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
*
76199706 AAATCTCCACACGTAGTCATTGGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
* *
76199743 TAATCTCCACACGTAGTCATCGGGTCTTACCCAGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
* *
76199780 TAATCTCCACACGTAATCATCGGGTCTTACCCGGA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGA
76199815 ATATTTTTCC
Statistics
Matches: 100, Mismatches: 9, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
37 100 1.00
ACGTcount: A:0.27, C:0.31, G:0.17, T:0.25
Consensus pattern (37 bp):
AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
Found at i:76200015 original size:48 final size:48
Alignment explanation
Indices: 76199956--76200292 Score: 584
Period size: 48 Copynumber: 7.0 Consensus size: 48
76199946 TATACACACG
* * * *
76199956 TCTCCTACATATTTCACACTAGCCCTTCGGCTTTACCACATATACGTA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
* *
76200004 TCTCATACATATTTCACACTAGCCATTTGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
* * *
76200052 TCTCATATATATTTCACATTAGCCTTTCGGCTTTATCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76200100 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76200148 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
*
76200196 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACCTA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76200244 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76200292 T
1 T
76200293 ATTTATCTTG
Statistics
Matches: 275, Mismatches: 14, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
48 275 1.00
ACGTcount: A:0.30, C:0.28, G:0.07, T:0.36
Consensus pattern (48 bp):
TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
Found at i:76203300 original size:24 final size:24
Alignment explanation
Indices: 76203268--76203316 Score: 98
Period size: 24 Copynumber: 2.0 Consensus size: 24
76203258 AAATTTGAAT
76203268 TCGTATAGTAATGAACACTTAAAC
1 TCGTATAGTAATGAACACTTAAAC
76203292 TCGTATAGTAATGAACACTTAAAC
1 TCGTATAGTAATGAACACTTAAAC
76203316 T
1 T
76203317 TTGCTCAAAT
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
24 25 1.00
ACGTcount: A:0.41, C:0.16, G:0.12, T:0.31
Consensus pattern (24 bp):
TCGTATAGTAATGAACACTTAAAC
Found at i:76203416 original size:40 final size:40
Alignment explanation
Indices: 76203371--76203898 Score: 723
Period size: 40 Copynumber: 12.9 Consensus size: 40
76203361 AATACACATT
* * * *
76203371 ACCAGCATGATTGCTCTTCGAGACCTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
*
76203411 ACCAGCACGAATGCTCTTCGGGACTTAGTCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* *
76203451 ACCAGCACGAATGCTCTTCGGGACTTAGCCCAGCTATACATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATA-A-C
* *
76203493 ACTAGCACGAATGCTCTTCGGGACTTAGCCCGGATAAAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
*
76203533 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGG--ATATAAC
* *
76203575 ACTAGCACGAATGTTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* ***
76203615 ACCAGCACGAATGCCCTTCGGGACTTAGCCCGGCTATATGTT
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGG--ATATAAC
* *
76203657 ACTAGCACGAATGTTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* * *
76203697 ACTAGCACGAATGCTCTTCGGGGCTTAGCCCGGCTATATATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGG--ATATAAC
*
76203739 ACTAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* *
76203779 ACCAGCACAAATGCTCTTCGGGACTTAGCCCGGCTATACATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATA-A-C
*
76203821 ACTAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* *
76203861 ACCAGCACGAATGCTCTTCGGGACTTAGCGCGGCTATA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATA
76203899 TAACTCTCAA
Statistics
Matches: 434, Mismatches: 44, Indels: 20
0.87 0.09 0.04
Matches are distributed among these distances:
40 251 0.58
41 4 0.01
42 179 0.41
ACGTcount: A:0.26, C:0.29, G:0.22, T:0.23
Consensus pattern (40 bp):
ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
Found at i:76203517 original size:82 final size:82
Alignment explanation
Indices: 76203371--76203900 Score: 866
Period size: 82 Copynumber: 6.5 Consensus size: 82
76203361 AATACACATT
* * * * * *
76203371 ACCAGCATGATTGCTCTTCGAGACCTAGCCCGG--ATATAACACCAGCACGAATGCTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
*
76203434 CTTAGTCCGGATATAAC
66 CTTAGCCCGGATATAAC
* *
76203451 ACCAGCACGAATGCTCTTCGGGACTTAGCCCAGCTATACATCACTAGCACGAATGCTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
*
76203516 CTTAGCCCGGATAAAAC
66 CTTAGCCCGGATATAAC
*
76203533 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGTTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76203598 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
* * * *
76203615 ACCAGCACGAATGCCCTTCGGGACTTAGCCCGGCTATATGTTACTAGCACGAATGTTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76203680 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
* *
76203697 ACTAGCACGAATGCTCTTCGGGGCTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76203762 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
* *
76203779 ACCAGCACAAATGCTCTTCGGGACTTAGCCCGGCTATACATCACTAGCACGAATGCTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76203844 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
*
76203861 ACCAGCACGAATGCTCTTCGGGACTTAGCGCGGCTATATA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATA
76203901 ACTCTCAATT
Statistics
Matches: 418, Mismatches: 30, Indels: 2
0.93 0.07 0.00
Matches are distributed among these distances:
80 28 0.07
82 390 0.93
ACGTcount: A:0.26, C:0.29, G:0.22, T:0.23
Consensus pattern (82 bp):
ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
CTTAGCCCGGATATAAC
Found at i:76205228 original size:37 final size:37
Alignment explanation
Indices: 76205165--76205310 Score: 238
Period size: 37 Copynumber: 3.9 Consensus size: 37
76205155 AGCTCAGATG
* * *
76205165 AAATCTCCACACGAAGTTATCTGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
76205202 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
*
76205239 TAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
* *
76205276 TAATCTCCACACGTAATCATCGGGTCTTACCCGGA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGA
76205311 ATATTTTCCA
Statistics
Matches: 104, Mismatches: 5, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
37 104 1.00
ACGTcount: A:0.27, C:0.32, G:0.18, T:0.24
Consensus pattern (37 bp):
AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
Found at i:76205510 original size:48 final size:48
Alignment explanation
Indices: 76205451--76205787 Score: 566
Period size: 48 Copynumber: 7.0 Consensus size: 48
76205441 TATACACACG
* * * *
76205451 TCTCCTACATATTTCACACTAGCCCTTCGGCTTTACCACATATACGTA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
* *
76205499 TCTCATACATATTTCACACTAGCCATTTGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
* * *
76205547 TCTCATATATATTTCACATTAGCCTTTCGGCTTTATCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76205595 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76205643 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
*
76205691 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACCTA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
* *
76205739 TCTCATACATATTTCACATTAGCCATTCGACTTTACCATATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76205787 T
1 T
76205788 ATTTATCTTG
Statistics
Matches: 273, Mismatches: 16, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
48 273 1.00
ACGTcount: A:0.30, C:0.27, G:0.06, T:0.36
Consensus pattern (48 bp):
TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
Found at i:76208791 original size:24 final size:24
Alignment explanation
Indices: 76208759--76208807 Score: 98
Period size: 24 Copynumber: 2.0 Consensus size: 24
76208749 AAATTTGAAT
76208759 TCGTATAGTAATGAACACTTAAAC
1 TCGTATAGTAATGAACACTTAAAC
76208783 TCGTATAGTAATGAACACTTAAAC
1 TCGTATAGTAATGAACACTTAAAC
76208807 T
1 T
76208808 TTGCTCAAAT
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
24 25 1.00
ACGTcount: A:0.41, C:0.16, G:0.12, T:0.31
Consensus pattern (24 bp):
TCGTATAGTAATGAACACTTAAAC
Found at i:76208917 original size:40 final size:40
Alignment explanation
Indices: 76208862--76209389 Score: 705
Period size: 40 Copynumber: 12.9 Consensus size: 40
76208852 AATACACATT
* * * *
76208862 ACCAGCATGATTGCTCTTCGGGACCTAGCCCGAATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* *
76208902 ACCAGCACGAATGCTCTTCGGGACGTAGTCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
*
76208942 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGTTATACATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATA-A-C
*
76208984 ACTAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* *
76209024 ACCAGCACGAATGCTCTTCAGGACTTAGCCCGGCTATATATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGG--ATATAAC
* * *
76209066 ACTAGTACGAATGTTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* **
76209106 ACCAGCACGAATGCCCTTCGGGACTTAGCCCGGCTATATATT
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGG--ATATAAC
* *
76209148 ACTAGCACGAATGTTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* * * *
76209188 ACCAGCACGATTGCTCTTCGGGGCTTAGTCCGGCTATATATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGG--ATATAAC
* *
76209230 ACTAGCACGAATGCTCTTCGGAACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
*
76209270 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATACATC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATA-A-C
*
76209312 ACTAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
* * *
76209352 ACCAGCACGAATGCTCTTTGGGACTTAGCGCGGCTATA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATA
76209390 TAACTCTCAA
Statistics
Matches: 428, Mismatches: 50, Indels: 20
0.86 0.10 0.04
Matches are distributed among these distances:
40 246 0.57
41 4 0.01
42 178 0.42
ACGTcount: A:0.26, C:0.28, G:0.22, T:0.24
Consensus pattern (40 bp):
ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGATATAAC
Found at i:76209018 original size:82 final size:82
Alignment explanation
Indices: 76208862--76209391 Score: 839
Period size: 82 Copynumber: 6.5 Consensus size: 82
76208852 AATACACATT
* * * * * *
76208862 ACCAGCATGATTGCTCTTCGGGACCTAGCCC-G-AATATAACACCAGCACGAATGCTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
* *
76208925 CGTAGTCCGGATATAAC
66 CTTAGCCCGGATATAAC
* *
76208942 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGTTATACATCACTAGCACGAATGCTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76209007 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
* * *
76209024 ACCAGCACGAATGCTCTTCAGGACTTAGCCCGGCTATATATCACTAGTACGAATGTTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76209089 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
* * *
76209106 ACCAGCACGAATGCCCTTCGGGACTTAGCCCGGCTATATATTACTAGCACGAATGTTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76209171 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
* * * *
76209188 ACCAGCACGATTGCTCTTCGGGGCTTAGTCCGGCTATATATCACTAGCACGAATGCTCTTCGGAA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76209253 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
*
76209270 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATACATCACTAGCACGAATGCTCTTCGGGA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
76209335 CTTAGCCCGGATATAAC
66 CTTAGCCCGGATATAAC
* *
76209352 ACCAGCACGAATGCTCTTTGGGACTTAGCGCGGCTATATA
1 ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATA
76209392 ACTCTCAATT
Statistics
Matches: 415, Mismatches: 33, Indels: 2
0.92 0.07 0.00
Matches are distributed among these distances:
80 28 0.07
81 1 0.00
82 386 0.93
ACGTcount: A:0.26, C:0.28, G:0.22, T:0.24
Consensus pattern (82 bp):
ACCAGCACGAATGCTCTTCGGGACTTAGCCCGGCTATATATCACTAGCACGAATGCTCTTCGGGA
CTTAGCCCGGATATAAC
Found at i:76210726 original size:37 final size:37
Alignment explanation
Indices: 76210663--76210808 Score: 229
Period size: 37 Copynumber: 3.9 Consensus size: 37
76210653 AGCTCAGATG
* * *
76210663 AAATCTCCACACGAAGTTATCTGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
*
76210700 AAATCTCCACATGTAGTCATCGGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
*
76210737 TAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
* *
76210774 TAATCTCCACACGTAATCATCGGGTCTTACCCGGA
1 AAATCTCCACACGTAGTCATCGGGTCTTACCCGGA
76210809 ATATATTTCC
Statistics
Matches: 102, Mismatches: 7, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
37 102 1.00
ACGTcount: A:0.27, C:0.31, G:0.18, T:0.25
Consensus pattern (37 bp):
AAATCTCCACACGTAGTCATCGGGTCTTACCCGGACA
Found at i:76211014 original size:48 final size:48
Alignment explanation
Indices: 76210950--76211286 Score: 566
Period size: 48 Copynumber: 7.0 Consensus size: 48
76210940 TATACACACG
* * * **
76210950 TCTCCTACATATTTCACACTAGCCCTTCGGCTTTACCACATATATGTA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
* *
76210998 TCTCATACACATTTCACACTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
* *
76211046 TCTCATATATATTTCACATTAGCCATTCGGCTTTATCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
*
76211094 TCTCATACATATTTCATATTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
*
76211142 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACCTA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
*
76211190 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACCTA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76211238 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
1 TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
76211286 T
1 T
76211287 ATTTATCTTG
Statistics
Matches: 274, Mismatches: 15, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
48 274 1.00
ACGTcount: A:0.30, C:0.28, G:0.07, T:0.36
Consensus pattern (48 bp):
TCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACATA
Found at i:76217250 original size:40 final size:40
Alignment explanation
Indices: 76217206--76217466 Score: 301
Period size: 40 Copynumber: 6.5 Consensus size: 40
76217196 CTCGCTCGAA
* * *
76217206 TGCCTTCGGGACATAGCCCGGATATAGTAACTTGCACAAT
1 TGCCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAC
* * *
76217246 TGCCTTCGAGACTTAGCCCGGATATAGTAACTCGCATAAT
1 TGCCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAC
76217286 TGCCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAC
1 TGCCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAC
*
76217326 TGCCTTCGGGACTTACCCCGGATATAGTAACTCGCACAAC
1 TGCCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAC
* * * * *
76217366 TGCCTTCGGGAGTTAGCCCGGA-ACTAGTAATTAGCGCAAA
1 TGCCTTCGGGACTTAGCCCGGATA-TAGTAACTCGCACAAC
* * * * * * *
76217406 TGCCATCGAGAGTTAGCCCGGA-ACTAGTAATTAGCGCAAA
1 TGCCTTCGGGACTTAGCCCGGATA-TAGTAACTCGCACAAC
* *
76217446 TGCCATCGAGACTTAGCCCGG
1 TGCCTTCGGGACTTAGCCCGG
76217467 TTATCGTCCG
Statistics
Matches: 203, Mismatches: 17, Indels: 2
0.91 0.08 0.01
Matches are distributed among these distances:
39 1 0.00
40 202 1.00
ACGTcount: A:0.27, C:0.27, G:0.23, T:0.23
Consensus pattern (40 bp):
TGCCTTCGGGACTTAGCCCGGATATAGTAACTCGCACAAC
Found at i:76221687 original size:40 final size:40
Alignment explanation
Indices: 76221586--76221806 Score: 250
Period size: 40 Copynumber: 5.5 Consensus size: 40
76221576 TATTCGAATG
* * *
76221586 ATATCCGGGCTAAGTCCCGAAGGCTTTTGTGCTAAGTGACT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGC-GAGTGACT
* * *
76221627 ATATCCGGACTAAGATCCGAAGGCATTTGTGCGAGTTACT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
* * * *
76221667 ATATCCGGGCCAAAACCCGAAGGCATTTGTGCTAGCGACT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
* * * *
76221707 ATATCCGGGCTAAGTCCCGAAGGCATTTATGCTAGTGACC
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
* **
76221747 ATATCCGGGCTAAGACCCGAAGGC-CTTGTGCGAGTGGTT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
76221786 ATATCC-GGCTAA-ATCCCGAAG
1 ATATCCGGGCTAAGA-CCCGAAG
76221807 ATACTTGGGT
Statistics
Matches: 153, Mismatches: 26, Indels: 5
0.83 0.14 0.03
Matches are distributed among these distances:
37 1 0.01
38 13 0.08
39 15 0.10
40 96 0.63
41 28 0.18
ACGTcount: A:0.25, C:0.24, G:0.26, T:0.24
Consensus pattern (40 bp):
ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
Found at i:76229732 original size:40 final size:40
Alignment explanation
Indices: 76229631--76229842 Score: 239
Period size: 40 Copynumber: 5.3 Consensus size: 40
76229621 TATTCGAATG
* * *
76229631 ATATCCGGGCTAAGTCCCGAAGGCTTTTGTGCTAAGTGACT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGC-GAGTGACT
* * *
76229672 ATATCCGGACTAAGATCCGAAGGCATTTGTGCGAGTTACT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
* * * * *
76229712 ATATCGGGGCCAAAACCCGAAGGCATTTGTGCTAGCGACT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
* * * *
76229752 ATATCCGGGCTAAGTCCCGAAGGCATTTATGCTAGTGACC
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
* **
76229792 ATATCCGGGCTAAGACCCGAAGGC-CTTGTGCGAGTGGTT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
76229831 ATATCC-GGCTAA
1 ATATCCGGGCTAA
76229843 ATCCTGAAGA
Statistics
Matches: 143, Mismatches: 28, Indels: 3
0.82 0.16 0.02
Matches are distributed among these distances:
38 6 0.04
39 15 0.10
40 94 0.66
41 28 0.20
ACGTcount: A:0.25, C:0.23, G:0.27, T:0.25
Consensus pattern (40 bp):
ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAGTGACT
Found at i:76233161 original size:16 final size:17
Alignment explanation
Indices: 76233140--76233171 Score: 57
Period size: 17 Copynumber: 1.9 Consensus size: 17
76233130 TTAAGTTAGC
76233140 AAATTTT-TTTTATTTT
1 AAATTTTCTTTTATTTT
76233156 AAATTTTCTTTTATTT
1 AAATTTTCTTTTATTT
76233172 AATTACTTTA
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
16 7 0.47
17 8 0.53
ACGTcount: A:0.25, C:0.03, G:0.00, T:0.72
Consensus pattern (17 bp):
AAATTTTCTTTTATTTT
Found at i:76235884 original size:17 final size:17
Alignment explanation
Indices: 76235862--76235895 Score: 68
Period size: 17 Copynumber: 2.0 Consensus size: 17
76235852 TTTCATATCT
76235862 TATTCAACTTATAATTC
1 TATTCAACTTATAATTC
76235879 TATTCAACTTATAATTC
1 TATTCAACTTATAATTC
76235896 GGTTTCCACC
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 17 1.00
ACGTcount: A:0.35, C:0.18, G:0.00, T:0.47
Consensus pattern (17 bp):
TATTCAACTTATAATTC
Found at i:76236287 original size:50 final size:49
Alignment explanation
Indices: 76236210--76236440 Score: 218
Period size: 50 Copynumber: 4.7 Consensus size: 49
76236200 ACCAAAGCTC
* *
76236210 TCTGGTACATATAGTAGCCTACACTTAGTACTACACGTGCGACCTAACAA
1 TCTGGTACACATAGTAGCCTGCACTTAGTACTACAC-TGCGACCTAACAA
* * *
76236260 TTTGGTACACGTAGTAGCCTGCACTTAGTACTACA---C-ACATAATCGAA
1 TCTGGTACACATAGTAGCCTGCACTTAGTACTACACTGCGACCTAA-C-AA
* * * *
76236307 GCGGGTACGCATAGTAGCTTGCACTTAGTACTACACATGCGACCTAACAA
1 TCTGGTACACATAGTAGCCTGCACTTAGTACTACAC-TGCGACCTAACAA
* * * *
76236357 TCTGGTACACGTAGTAGCCTGCACTTAGTACTACACACGTGACCTAAAACCA
1 TCTGGTACACATAGTAGCCTGCACTTAGTACTACAC-TGCGACCT--AACAA
*** *
76236409 TCTTAAACACATAGTAGCCTGCACATAGTACT
1 TCTGGTACACATAGTAGCCTGCACTTAGTACT
76236441 GCACATGTGT
Statistics
Matches: 147, Mismatches: 25, Indels: 16
0.78 0.13 0.09
Matches are distributed among these distances:
45 5 0.03
46 2 0.01
47 31 0.21
50 71 0.48
51 2 0.01
52 36 0.24
ACGTcount: A:0.32, C:0.26, G:0.17, T:0.25
Consensus pattern (49 bp):
TCTGGTACACATAGTAGCCTGCACTTAGTACTACACTGCGACCTAACAA
Found at i:76246763 original size:50 final size:50
Alignment explanation
Indices: 76246677--76246966 Score: 240
Period size: 50 Copynumber: 5.7 Consensus size: 50
76246667 ACCGAAGCTC
* * * * *
76246677 TCTGGTACGCATAGTAGCCTGCACTTAGTACTACACATGCGACCTAACAA
1 TCTGGTACACGTAGTAGCCTACACTTAGTACTACACACGTGACCTAACAA
* * * * * *
76246727 TCTGTTACATGTAGTAGCGTACACTTAGTACTACACACATGATCTAACCA
1 TCTGGTACACGTAGTAGCCTACACTTAGTACTACACACGTGACCTAACAA
* * ** * * * * *
76246777 TCTGATACACGTAATAGCCTGTACTTAATACTAGACACGTAACCGAAGCTA
1 TCTGGTACACGTAGTAGCCTACACTTAGTACTACACACGTGACCTAA-CAA
* ** * * * *
76246828 TCAGGTACAAATAGTAGCCTTCAGTTAGTACTACACATGCGACCTAACAA
1 TCTGGTACACGTAGTAGCCTACACTTAGTACTACACACGTGACCTAACAA
*
76246878 TCTGGTACACGTAGTAGCCTACACTTAGTACTACACAAGTGACCTAA-AA
1 TCTGGTACACGTAGTAGCCTACACTTAGTACTACACACGTGACCTAACAA
** * * *
76246927 CCGTCTGAAACACATAGTAGCCTGCACATAGTACTACACA
1 ---TCTGGTACACGTAGTAGCCTACACTTAGTACTACACA
76246967 TGTGTTCTCA
Statistics
Matches: 185, Mismatches: 51, Indels: 6
0.76 0.21 0.02
Matches are distributed among these distances:
49 2 0.01
50 116 0.63
51 35 0.19
52 32 0.17
ACGTcount: A:0.34, C:0.26, G:0.16, T:0.25
Consensus pattern (50 bp):
TCTGGTACACGTAGTAGCCTACACTTAGTACTACACACGTGACCTAACAA
Found at i:76249772 original size:25 final size:25
Alignment explanation
Indices: 76249743--76249790 Score: 69
Period size: 25 Copynumber: 1.9 Consensus size: 25
76249733 TTATAATATG
* * *
76249743 AAAATGACCGTTTTGCCCCTAGGTA
1 AAAATGACCATTATACCCCTAGGTA
76249768 AAAATGACCATTATACCCCTAGG
1 AAAATGACCATTATACCCCTAGG
76249791 GTTTAAATAT
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
25 20 1.00
ACGTcount: A:0.33, C:0.25, G:0.17, T:0.25
Consensus pattern (25 bp):
AAAATGACCATTATACCCCTAGGTA
Found at i:76249874 original size:11 final size:11
Alignment explanation
Indices: 76249838--76249893 Score: 57
Period size: 11 Copynumber: 5.5 Consensus size: 11
76249828 CATGGTATGT
76249838 ATGATATGCAC
1 ATGATATGCAC
* *
76249849 ATGACATG--T
1 ATGATATGCAC
76249858 ATGATATGCAC
1 ATGATATGCAC
*
76249869 ATGATATG--T
1 ATGATATGCAC
76249878 ATGATATGCAC
1 ATGATATGCAC
76249889 ATGAT
1 ATGAT
76249894 GTATTCATAA
Statistics
Matches: 35, Mismatches: 6, Indels: 8
0.71 0.12 0.16
Matches are distributed among these distances:
9 15 0.43
11 20 0.57
ACGTcount: A:0.36, C:0.12, G:0.20, T:0.32
Consensus pattern (11 bp):
ATGATATGCAC
Found at i:76249893 original size:20 final size:20
Alignment explanation
Indices: 76249827--76249893 Score: 116
Period size: 20 Copynumber: 3.4 Consensus size: 20
76249817 ATTTTGATAA
*
76249827 ACATGGTATGTATGATATGC
1 ACATGATATGTATGATATGC
*
76249847 ACATGACATGTATGATATGC
1 ACATGATATGTATGATATGC
76249867 ACATGATATGTATGATATGC
1 ACATGATATGTATGATATGC
76249887 ACATGAT
1 ACATGAT
76249894 GTATTCATAA
Statistics
Matches: 44, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 44 1.00
ACGTcount: A:0.34, C:0.12, G:0.21, T:0.33
Consensus pattern (20 bp):
ACATGATATGTATGATATGC
Found at i:76249972 original size:25 final size:25
Alignment explanation
Indices: 76249944--76250072 Score: 140
Period size: 25 Copynumber: 5.2 Consensus size: 25
76249934 AGGAAGTGTA
76249944 AAAGGGCTTATGCCCCAGTTATGAT
1 AAAGGGCTTATGCCCCAGTTATGAT
* *
76249969 AAAGGGCTTATGCCCGAGTTACGAT
1 AAAGGGCTTATGCCCCAGTTATGAT
*
76249994 AAAGGGCTTATGCCCCAGTTATTA-
1 AAAGGGCTTATGCCCCAGTTATGAT
* *
76250018 AAAGGGCTT-TGCCCTAGTTATTA-
1 AAAGGGCTTATGCCCCAGTTATGAT
*
76250041 AAAGAGGC-TAGGCCTCCAGTTATATGAT
1 AAAG-GGCTTATGCC-CCAG-T-TATGAT
76250069 AAAG
1 AAAG
76250073 CAGCTATGCT
Statistics
Matches: 89, Mismatches: 9, Indels: 9
0.83 0.08 0.08
Matches are distributed among these distances:
23 18 0.20
24 15 0.17
25 47 0.53
26 1 0.01
27 4 0.04
28 4 0.04
ACGTcount: A:0.30, C:0.19, G:0.24, T:0.27
Consensus pattern (25 bp):
AAAGGGCTTATGCCCCAGTTATGAT
Found at i:76257807 original size:25 final size:25
Alignment explanation
Indices: 76257778--76257825 Score: 69
Period size: 25 Copynumber: 1.9 Consensus size: 25
76257768 TTATAATATG
* * *
76257778 AAAATGACCGTTTTGCCCCTAGGTA
1 AAAATGACCATTATACCCCTAGGTA
76257803 AAAATGACCATTATACCCCTAGG
1 AAAATGACCATTATACCCCTAGG
76257826 GTTTAAATAT
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
25 20 1.00
ACGTcount: A:0.33, C:0.25, G:0.17, T:0.25
Consensus pattern (25 bp):
AAAATGACCATTATACCCCTAGGTA
Found at i:76257928 original size:20 final size:20
Alignment explanation
Indices: 76257862--76257922 Score: 95
Period size: 20 Copynumber: 3.0 Consensus size: 20
76257852 ATTTTGATAA
*
76257862 ACATGGTATGTATGATATGC
1 ACATGATATGTATGATATGC
* *
76257882 ACATCACATGTATGATATGC
1 ACATGATATGTATGATATGC
76257902 ACATGATATGTATGATATGC
1 ACATGATATGTATGATATGC
76257922 A
1 A
76257923 AGTGATGTAT
Statistics
Matches: 36, Mismatches: 5, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
20 36 1.00
ACGTcount: A:0.34, C:0.13, G:0.20, T:0.33
Consensus pattern (20 bp):
ACATGATATGTATGATATGC
Found at i:76258061 original size:24 final size:24
Alignment explanation
Indices: 76257977--76258108 Score: 194
Period size: 25 Copynumber: 5.4 Consensus size: 24
76257967 GGAGGAAGTG
76257977 TAAAAGGGCTTATGCCCCAGTTAT
1 TAAAAGGGCTTATGCCCCAGTTAT
* *
76258001 GATAAAGGGCTTATGCCCCAGTTAC
1 TA-AAAGGGCTTATGCCCCAGTTAT
*
76258026 GATAAAGGGCTTATGCCCCAGTTAT
1 TA-AAAGGGCTTATGCCCCAGTTAT
76258051 TAAAAGGGCTTATGCCCCAGTTAT
1 TAAAAGGGCTTATGCCCCAGTTAT
*
76258075 TAAAAGGGCTT-TGCCGCAGTTAT
1 TAAAAGGGCTTATGCCCCAGTTAT
76258098 TAAAAGAGGCT
1 TAAAAG-GGCT
76258109 GGGCGTCCAG
Statistics
Matches: 101, Mismatches: 5, Indels: 4
0.92 0.05 0.04
Matches are distributed among these distances:
23 17 0.17
24 38 0.38
25 46 0.46
ACGTcount: A:0.30, C:0.20, G:0.23, T:0.27
Consensus pattern (24 bp):
TAAAAGGGCTTATGCCCCAGTTAT
Found at i:76258121 original size:48 final size:48
Alignment explanation
Indices: 76257977--76258108 Score: 176
Period size: 49 Copynumber: 2.7 Consensus size: 48
76257967 GGAGGAAGTG
* * *
76257977 TAAAAGGGCTTATGCCCCAGTTATGATAAAGGGCTTATGCCCCAGTTAC
1 TAAAAGGGCTTATGCCCCAGTTATTA-AAAGGGCTTAGGCCCCAGTTAT
* *
76258026 GATAAAGGGCTTATGCCCCAGTTATTAAAAGGGCTTATGCCCCAGTTAT
1 TA-AAAGGGCTTATGCCCCAGTTATTAAAAGGGCTTAGGCCCCAGTTAT
*
76258075 TAAAAGGGCTT-TGCCGCAGTTATTAAAAGAGGCT
1 TAAAAGGGCTTATGCCCCAGTTATTAAAAG-GGCT
76258109 GGGCGTCCAG
Statistics
Matches: 76, Mismatches: 5, Indels: 5
0.88 0.06 0.06
Matches are distributed among these distances:
47 17 0.22
48 13 0.17
49 23 0.30
50 23 0.30
ACGTcount: A:0.30, C:0.20, G:0.23, T:0.27
Consensus pattern (48 bp):
TAAAAGGGCTTATGCCCCAGTTATTAAAAGGGCTTAGGCCCCAGTTAT
Found at i:76271748 original size:15 final size:15
Alignment explanation
Indices: 76271728--76271757 Score: 60
Period size: 15 Copynumber: 2.0 Consensus size: 15
76271718 TATTATCTAA
76271728 TATTAGAACTTTTCC
1 TATTAGAACTTTTCC
76271743 TATTAGAACTTTTCC
1 TATTAGAACTTTTCC
76271758 CTTGAACCAT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.27, C:0.20, G:0.07, T:0.47
Consensus pattern (15 bp):
TATTAGAACTTTTCC
Found at i:76281871 original size:93 final size:93
Alignment explanation
Indices: 76281761--76281931 Score: 297
Period size: 93 Copynumber: 1.8 Consensus size: 93
76281751 GCCCCTAAGT
* *
76281761 GAACTCGGACTCAACTCAACGAGCTCGGGCGTTCGCATCCATAAATGAACTCGGACTCAACTCAA
1 GAACTCGGACTCAACTCAACGAGCTCGGACATTCGCATCCATAAATGAACTCGGACTCAACTCAA
76281826 CGAGTTCGGATGCCTAGTTACATCTCAC
66 CGAGTTCGGATGCCTAGTTACATCTCAC
* * *
76281854 GAACTCGGACTCAACTCAACGAGTTCGGACATTTGCATCCATAAGTGAACTCGGACTCAACTCAA
1 GAACTCGGACTCAACTCAACGAGCTCGGACATTCGCATCCATAAATGAACTCGGACTCAACTCAA
76281919 CGAGTTCGGATGC
66 CGAGTTCGGATGC
76281932 TCAACCATCC
Statistics
Matches: 73, Mismatches: 5, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
93 73 1.00
ACGTcount: A:0.29, C:0.29, G:0.21, T:0.22
Consensus pattern (93 bp):
GAACTCGGACTCAACTCAACGAGCTCGGACATTCGCATCCATAAATGAACTCGGACTCAACTCAA
CGAGTTCGGATGCCTAGTTACATCTCAC
Found at i:76281928 original size:46 final size:46
Alignment explanation
Indices: 76281756--76281928 Score: 208
Period size: 46 Copynumber: 3.7 Consensus size: 46
76281746 AACCCGCCCC
* * * *
76281756 TAAGTGAACTCGGACTCAACTCAACGAGCTCGGGCGTTCGCATCCA
1 TAAGTGAACTCGGACTCAACTCAACGAGTTCGGACATTTGCATCCA
* * *
76281802 TAAATGAACTCGGACTCAACTCAACGAGTTCGGATGCCTAGTTACAT-C-
1 TAAGTGAACTCGGACTCAACTCAACGAGTTCGGA---C-ATTTGCATCCA
* *
76281850 TCA-CGAACTCGGACTCAACTCAACGAGTTCGGACATTTGCATCCA
1 TAAGTGAACTCGGACTCAACTCAACGAGTTCGGACATTTGCATCCA
76281895 TAAGTGAACTCGGACTCAACTCAACGAGTTCGGA
1 TAAGTGAACTCGGACTCAACTCAACGAGTTCGGA
76281929 TGCTCAACCA
Statistics
Matches: 107, Mismatches: 13, Indels: 14
0.80 0.10 0.10
Matches are distributed among these distances:
43 6 0.06
44 2 0.02
45 2 0.02
46 60 0.56
47 29 0.27
48 2 0.02
49 2 0.02
50 4 0.04
ACGTcount: A:0.29, C:0.28, G:0.21, T:0.22
Consensus pattern (46 bp):
TAAGTGAACTCGGACTCAACTCAACGAGTTCGGACATTTGCATCCA
Found at i:76289384 original size:46 final size:46
Alignment explanation
Indices: 76289312--76289477 Score: 212
Period size: 46 Copynumber: 3.6 Consensus size: 46
76289302 CGCCCCTAAG
*
76289312 TGAACTCGGACTCAACTCAACTAGTTCGGGCATTTGCATCCATAAA
1 TGAACTCGGACTCAACTCAACGAGTTCGGGCATTTGCATCCATAAA
* * * *
76289358 TGAACTCGGACTCCACTCAACGAGTTCGGTGCTAGTTACAT-C-T-CA
1 TGAACTCGGACTCAACTCAACGAGTTCGG-GC-ATTTGCATCCATAAA
* * * *
76289403 CGAACTCGGACTCAACTCAACGAGTTCAGACATTTGCATCCATAAG
1 TGAACTCGGACTCAACTCAACGAGTTCGGGCATTTGCATCCATAAA
76289449 TGAACTCGGACTCAACTCAACGAGTTCGG
1 TGAACTCGGACTCAACTCAACGAGTTCGG
76289478 ATGCTCAACC
Statistics
Matches: 100, Mismatches: 15, Indels: 10
0.80 0.12 0.08
Matches are distributed among these distances:
43 6 0.06
44 2 0.02
45 28 0.28
46 55 0.55
47 3 0.03
48 6 0.06
ACGTcount: A:0.29, C:0.28, G:0.19, T:0.24
Consensus pattern (46 bp):
TGAACTCGGACTCAACTCAACGAGTTCGGGCATTTGCATCCATAAA
Found at i:76289418 original size:91 final size:92
Alignment explanation
Indices: 76289313--76289482 Score: 288
Period size: 91 Copynumber: 1.9 Consensus size: 92
76289303 GCCCCTAAGT
* * * *
76289313 GAACTCGGACTCAACTCAACTAGTTCGGGCATTTGCATCCATAAATGAACTCGGACTCCACTCAA
1 GAACTCGGACTCAACTCAACGAGTTCAGACATTTGCATCCATAAATGAACTCGGACTCAACTCAA
76289378 CGAGTTCGG-TGCTAGTTACATCTCAC
66 CGAGTTCGGATGCTAGTTACATCTCAC
*
76289404 GAACTCGGACTCAACTCAACGAGTTCAGACATTTGCATCCATAAGTGAACTCGGACTCAACTCAA
1 GAACTCGGACTCAACTCAACGAGTTCAGACATTTGCATCCATAAATGAACTCGGACTCAACTCAA
76289469 CGAGTTCGGATGCT
66 CGAGTTCGGATGCT
76289483 CAACCATCCT
Statistics
Matches: 73, Mismatches: 5, Indels: 1
0.92 0.06 0.01
Matches are distributed among these distances:
91 69 0.95
92 4 0.05
ACGTcount: A:0.29, C:0.28, G:0.19, T:0.24
Consensus pattern (92 bp):
GAACTCGGACTCAACTCAACGAGTTCAGACATTTGCATCCATAAATGAACTCGGACTCAACTCAA
CGAGTTCGGATGCTAGTTACATCTCAC
Found at i:76296487 original size:40 final size:40
Alignment explanation
Indices: 76296402--76296552 Score: 134
Period size: 40 Copynumber: 3.8 Consensus size: 40
76296392 AATTGAATGA
* * *
76296402 TATCCGGGCTAA-ATCCCGAAGACAATTATGCTG-GAAATTA-
1 TATCCGGGCTAAGA-CCCGAAGGCAATTGTGC-GAGACA-TAC
* * *
76296442 TATCCGGGTTAAGACCCGAAGGCAATTGTGCTAGTGGC-TAC
1 TATCCGGGCTAAGACCCGAAGGCAATTGTGC--GAGACATAC
*
76296483 -ATCCGGGCTAAGACCCGAAGGC-ATTCGTGCGAGACATTC
1 TATCCGGGCTAAGACCCGAAGGCAATT-GTGCGAGACATAC
*
76296522 TATCCGGGCTAAGACCCGAAGGCATTTGTGC
1 TATCCGGGCTAAGACCCGAAGGCAATTGTGC
76296553 ACATGGTTAT
Statistics
Matches: 92, Mismatches: 11, Indels: 16
0.77 0.09 0.13
Matches are distributed among these distances:
38 3 0.03
39 5 0.05
40 79 0.86
41 4 0.04
42 1 0.01
ACGTcount: A:0.27, C:0.24, G:0.26, T:0.23
Consensus pattern (40 bp):
TATCCGGGCTAAGACCCGAAGGCAATTGTGCGAGACATAC
Found at i:76296566 original size:40 final size:40
Alignment explanation
Indices: 76296439--76296568 Score: 138
Period size: 40 Copynumber: 3.2 Consensus size: 40
76296429 ATGCTGGAAA
* * * *
76296439 TTATATCCGGGTTAAGACCCGAAGGCAATTGTGCTAGTGG
1 TTATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATGG
* * * **
76296479 CTACATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGA-CA
1 TTATATCCGGGCTAAGACCCGAAGGCATTTGTGCGA-ATGG
*
76296519 TTCTATCCGGGCTAAGACCCGAAGGCATTTGTGC-ACATGG
1 TTATATCCGGGCTAAGACCCGAAGGCATTTGTGCGA-ATGG
76296559 TTATATCCGG
1 TTATATCCGG
76296569 TTATATTCCG
Statistics
Matches: 71, Mismatches: 17, Indels: 4
0.77 0.18 0.04
Matches are distributed among these distances:
39 2 0.03
40 69 0.97
ACGTcount: A:0.25, C:0.24, G:0.28, T:0.24
Consensus pattern (40 bp):
TTATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATGG
Found at i:76298408 original size:19 final size:20
Alignment explanation
Indices: 76298384--76298421 Score: 53
Period size: 19 Copynumber: 1.9 Consensus size: 20
76298374 GGTACCACCA
76298384 AAACAT-ATATCA-CATCTTT
1 AAACATCAT-TCATCATCTTT
76298403 AAACATCATTCATCATCTT
1 AAACATCATTCATCATCTT
76298422 ACCACCTTAT
Statistics
Matches: 17, Mismatches: 0, Indels: 3
0.85 0.00 0.15
Matches are distributed among these distances:
19 9 0.53
20 8 0.47
ACGTcount: A:0.39, C:0.24, G:0.00, T:0.37
Consensus pattern (20 bp):
AAACATCATTCATCATCTTT
Found at i:76298818 original size:46 final size:45
Alignment explanation
Indices: 76298659--76298818 Score: 171
Period size: 46 Copynumber: 3.5 Consensus size: 45
76298649 GTGAACATGA
* * * *
76298659 ACTCAACTCAACGAGCTCGGGCGTTCGCATCCATAAATGAACTCGG
1 ACTCAACTCAACGAGTTCGGACATTTGCATCCAT-AATGAACTCGG
* * * * *
76298705 ACTCAACTCAACGAGTTCGGATGCCTAGTTACAT--TTCACGAACTCGG
1 ACTCAACTCAACGAGTTCGGA---C-ATTTGCATCCATAATGAACTCGG
76298752 ACTCAACTCAACGAGTTCGGACATTTGCATCCATAAGTGAACTCGG
1 ACTCAACTCAACGAGTTCGGACATTTGCATCCATAA-TGAACTCGG
76298798 ACTCAACTCAACGAGTTCGGA
1 ACTCAACTCAACGAGTTCGGA
76298819 TGCTCAACCA
Statistics
Matches: 93, Mismatches: 14, Indels: 14
0.77 0.12 0.12
Matches are distributed among these distances:
43 6 0.06
44 1 0.01
45 2 0.02
46 48 0.52
47 30 0.32
48 1 0.01
49 1 0.01
50 4 0.04
ACGTcount: A:0.29, C:0.28, G:0.20, T:0.23
Consensus pattern (45 bp):
ACTCAACTCAACGAGTTCGGACATTTGCATCCATAATGAACTCGG
Found at i:76299275 original size:30 final size:30
Alignment explanation
Indices: 76299241--76299300 Score: 75
Period size: 30 Copynumber: 2.0 Consensus size: 30
76299231 ATTTAATACG
*
76299241 AACTTTAAAAAAATTACACTTTTTCCCCTA
1 AACTTTAAAAAAATTACACTTTTACCCCTA
*** *
76299271 AACTTTTGCATAATTACACTTTTACCCCTA
1 AACTTTAAAAAAATTACACTTTTACCCCTA
76299301 GGCTCGGGAA
Statistics
Matches: 25, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
30 25 1.00
ACGTcount: A:0.35, C:0.25, G:0.02, T:0.38
Consensus pattern (30 bp):
AACTTTAAAAAAATTACACTTTTACCCCTA
Found at i:76301423 original size:42 final size:41
Alignment explanation
Indices: 76301376--76301497 Score: 136
Period size: 43 Copynumber: 2.9 Consensus size: 41
76301366 TTAGGGTTAT
* *
76301376 TGAGACTACGTGTAATACAATATCTGGGATGTGGCATCAATA
1 TGAGACTACGTGTAAGACCATATCTGGGAT-TGGCATCAATA
* * *
76301418 TGAGACTTCGTGTAAGACCATACCTGGGCTATTGGCATCGATA
1 TGAGACTACGTGTAAGACCATATCTGGG--ATTGGCATCAATA
* * *
76301461 CGAGATTACATGTAAGACCATATCTGGGATATGGCAT
1 TGAGACTACGTGTAAGACCATATCTGGGAT-TGGCAT
76301498 TGGTACGATA
Statistics
Matches: 67, Mismatches: 10, Indels: 6
0.81 0.12 0.07
Matches are distributed among these distances:
41 2 0.03
42 30 0.45
43 33 0.49
44 2 0.03
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (41 bp):
TGAGACTACGTGTAAGACCATATCTGGGATTGGCATCAATA
Found at i:76304225 original size:47 final size:47
Alignment explanation
Indices: 76304162--76304549 Score: 607
Period size: 47 Copynumber: 8.3 Consensus size: 47
76304152 CCCTTCGGGA
* *
76304162 CTTATCACATTTATACACTTTCACATCCATCACATTGGCCATTCGGC
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
* * *
76304209 CTTATGACATATATACACTTTCACATTCATCACATTGGCCATTAGGT
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
* * *
76304256 CTTATCTCATATATACACTTTCACATTCATCACATTGGCCATTAGGT
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
* *
76304303 CTTATCTCATATATACACTTTCACATTCATCACATTGGCCATTCGAC
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
* * *
76304350 CCTATCACATATATACACTTTCACATTCATCACGTTGGCCACTCGGC
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
* * *
76304397 CCTATCA-ATATATATACTTTCACATTCATCACATTGGCCACTCGGC
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
* *
76304443 CCTATCACATATATATACTTTCACATTCATCACATTGGCCATTCGGC
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
76304490 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
1 CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
76304537 CTTATCACATATA
1 CTTATCACATATA
76304550 CATATCTTGT
Statistics
Matches: 320, Mismatches: 20, Indels: 2
0.94 0.06 0.01
Matches are distributed among these distances:
46 44 0.14
47 276 0.86
ACGTcount: A:0.28, C:0.29, G:0.09, T:0.35
Consensus pattern (47 bp):
CTTATCACATATATACACTTTCACATTCATCACATTGGCCATTCGGC
Found at i:76304499 original size:22 final size:22
Alignment explanation
Indices: 76304471--76304546 Score: 64
Period size: 22 Copynumber: 3.3 Consensus size: 22
76304461 TTTCACATTC
76304471 ATCACATTGGCCATTCGGCCTT
1 ATCACATTGGCCATTCGGCCTT
** * * *
76304493 ATCACATATATACACTTTC-ACATT
1 ATCACAT-T-GGC-CATTCGGCCTT
76304517 CATCACATTGGCCATTCGGCCTT
1 -ATCACATTGGCCATTCGGCCTT
76304540 ATCACAT
1 ATCACAT
76304547 ATACATATCT
Statistics
Matches: 39, Mismatches: 10, Indels: 10
0.66 0.17 0.17
Matches are distributed among these distances:
22 18 0.46
23 5 0.13
24 5 0.13
25 11 0.28
ACGTcount: A:0.26, C:0.30, G:0.11, T:0.33
Consensus pattern (22 bp):
ATCACATTGGCCATTCGGCCTT
Found at i:76315520 original size:21 final size:21
Alignment explanation
Indices: 76315496--76315540 Score: 90
Period size: 21 Copynumber: 2.1 Consensus size: 21
76315486 AAAAGAAAAT
76315496 CTAAAGATTTAAGAGAGACCA
1 CTAAAGATTTAAGAGAGACCA
76315517 CTAAAGATTTAAGAGAGACCA
1 CTAAAGATTTAAGAGAGACCA
76315538 CTA
1 CTA
76315541 CTATCCTTAA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 24 1.00
ACGTcount: A:0.47, C:0.16, G:0.18, T:0.20
Consensus pattern (21 bp):
CTAAAGATTTAAGAGAGACCA
Found at i:76323599 original size:29 final size:29
Alignment explanation
Indices: 76323565--76323669 Score: 86
Period size: 29 Copynumber: 3.6 Consensus size: 29
76323555 TACTCGATTT
* * *
76323565 CGCACACTTAGTGCCATGCGATTTAAGCC
1 CGCACACTTAGTGCCATACCATTCAAGCC
** * * *
76323594 CGCACACACAGTGCCATACCCTTCGAGCT
1 CGCACACTTAGTGCCATACCATTCAAGCC
* * *
76323623 CGCACACTTAGTGCCATA-TATTTCCAGCA
1 CGCACACTTAGTGCCATACCA-TTCAAGCC
*
76323652 TGCACACTTAGTGCCATA
1 CGCACACTTAGTGCCATA
76323670 TATTTCCAGC
Statistics
Matches: 60, Mismatches: 15, Indels: 2
0.78 0.19 0.03
Matches are distributed among these distances:
29 60 1.00
ACGTcount: A:0.26, C:0.33, G:0.17, T:0.24
Consensus pattern (29 bp):
CGCACACTTAGTGCCATACCATTCAAGCC
Found at i:76323657 original size:58 final size:59
Alignment explanation
Indices: 76323603--76323725 Score: 178
Period size: 58 Copynumber: 2.1 Consensus size: 59
76323593 CCGCACACAC
* *
76323603 AGTGCCATACCCTTCGAGC-TCGCACACTTAGTGCCATATATTTCCAGCATGCACACTT
1 AGTGCCATACACTTCCAGCATCGCACACTTAGTGCCATATATTTCCAGCATGCACACTT
* * * *
76323661 AGTGCCATATATTTCCAGCAT-GCACACTCAGTGCCATATTTTTCCAGCATGCACACTT
1 AGTGCCATACACTTCCAGCATCGCACACTTAGTGCCATATATTTCCAGCATGCACACTT
76323719 AGTGCCA
1 AGTGCCA
76323726 ATCTCGTCAC
Statistics
Matches: 58, Mismatches: 6, Indels: 2
0.88 0.09 0.03
Matches are distributed among these distances:
58 57 0.98
59 1 0.02
ACGTcount: A:0.25, C:0.31, G:0.15, T:0.28
Consensus pattern (59 bp):
AGTGCCATACACTTCCAGCATCGCACACTTAGTGCCATATATTTCCAGCATGCACACTT
Found at i:76323670 original size:29 final size:29
Alignment explanation
Indices: 76323624--76323725 Score: 186
Period size: 29 Copynumber: 3.5 Consensus size: 29
76323614 CTTCGAGCTC
76323624 GCACACTTAGTGCCATATATTTCCAGCAT
1 GCACACTTAGTGCCATATATTTCCAGCAT
76323653 GCACACTTAGTGCCATATATTTCCAGCAT
1 GCACACTTAGTGCCATATATTTCCAGCAT
* *
76323682 GCACACTCAGTGCCATATTTTTCCAGCAT
1 GCACACTTAGTGCCATATATTTCCAGCAT
76323711 GCACACTTAGTGCCA
1 GCACACTTAGTGCCA
76323726 ATCTCGTCAC
Statistics
Matches: 70, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
29 70 1.00
ACGTcount: A:0.26, C:0.29, G:0.15, T:0.29
Consensus pattern (29 bp):
GCACACTTAGTGCCATATATTTCCAGCAT
Done.