Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold408
Parameters: 2 7 7 80 10 50 1000
Length:  59160

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1318--1541
40
5.7
40
85
6
287
25
28
21
24
1.99
1318--1541
79
2.8
79
85
5
292
25
28
21
24
1.99
9342--9565
40
5.7
40
85
6
287
25
28
21
24
1.99
9342--9565
79
2.8
79
85
5
292
25
28
21
24
1.99
23026--23078
23
2.4
22
76
20
56
9
18
1
69
1.25
25416--25447
12
2.6
12
95
5
55
65
3
6
25
1.31
28703--28763
13
4.5
13
76
13
61
14
8
4
72
1.26
32973--33001
10
2.7
11
89
10
51
6
6
6
79
1.06
41511--41554
18
2.4
18
88
11
63
72
0
20
6
1.07
44791--44834
22
2.0
22
90
0
70
31
4
36
27
1.77
46849--46925
23
3.4
23
75
8
77
27
3
31
37
1.75
48054--48112
30
2.0
30
83
6
75
28
15
25
30
1.96
51631--51692
22
2.8
22
90
2
88
32
33
4
29
1.78
53843--53937
18
5.4
17
74
13
68
14
27
2
55
1.51
53875--53965
47
1.9
48
88
2
139
18
26
1
53
1.51
53962--53993
15
2.1
16
94
5
57
6
21
0
71
1.07
54981--55010
12
2.6
11
94
5
51
10
0
6
83
0.81

Tables:   1

The End!