Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold830
Parameters: 2 7 7 80 10 50 1000
Length:  58117

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4434--4471
20
1.9
19
85
15
51
10
18
28
42
1.83
8128--8181
20
2.7
20
82
0
63
24
20
18
37
1.94
8128--8201
30
2.5
30
86
8
98
21
20
18
39
1.93
8128--8192
20
3.2
20
71
16
53
23
21
16
38
1.93
16178--16229
23
2.3
22
75
21
54
9
23
1
65
1.32
21098--21145
20
2.4
20
67
0
51
33
18
27
20
1.96
24191--24287
30
3.2
30
72
8
99
28
16
26
27
1.97
26466--26496
12
2.6
12
100
0
62
25
16
12
45
1.83
26544--26585
5
8.0
5
82
15
50
4
16
0
78
0.91
26542--26596
16
3.4
16
80
14
60
3
18
1
76
1.02
27534--27562
13
2.1
14
93
6
51
13
3
6
75
1.13
29281--29377
30
3.2
30
75
2
106
28
15
26
28
1.96
29682--29713
12
2.7
12
95
0
55
18
21
0
59
1.38
29695--29756
27
2.3
27
83
10
74
9
19
1
69
1.25
29719--29837
11
10.0
12
69
19
54
8
16
3
71
1.24
29697--29755
14
4.3
14
74
16
52
10
16
1
71
1.22
29762--29819
18
3.3
18
75
4
64
5
12
6
75
1.16
29794--29823
11
2.7
11
100
0
60
0
10
6
83
0.81
29717--29823
6
17.7
6
67
11
58
6
16
3
72
1.20
30886--30943
20
2.8
20
75
10
55
8
8
5
77
1.11
36951--36990
18
2.2
18
86
4
53
12
27
0
60
1.33
38045--38091
13
3.5
13
94
5
85
19
8
0
72
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38132--38163
12
2.7
12
100
0
64
12
0
6
81
0.87
39153--39199
23
2.1
23
84
7
62
51
12
4
31
1.59
44536--44590
15
3.6
15
97
2
101
20
12
5
61
1.50
44628--44661
12
2.8
12
100
0
68
17
0
5
76
0.98
45654--45700
23
2.1
23
84
7
62
51
12
4
31
1.59
53383--53438
21
2.7
20
88
5
76
33
33
3
28
1.75
53389--53449
21
3.0
21
85
7
63
32
34
4
27
1.78
53807--53874
16
4.2
16
96
0
127
26
0
36
36
1.57
54096--54529
119
3.7
120
95
3
787
50
5
1
42
1.34
54210--54378
15
11.6
15
65
22
58
51
4
1
42
1.30
54465--54504
16
2.6
16
78
21
50
57
2
0
40
1.12
58045--58086
12
3.2
13
80
10
50
0
28
11
59
1.33

Tables:   1

The End!