Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1514
Parameters: 2 7 7 80 10 50 1000
Length:  52527

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1611--1641
4
8.0
4
92
7
55
22
0
0
77
0.77
4886--5091
102
2.0
103
83
11
264
41
11
17
28
1.85
34577--34613
13
2.9
12
88
11
56
67
8
2
21
1.29
34580--34617
14
2.8
13
88
7
58
68
5
2
23
1.23
34656--34688
14
2.4
14
100
0
66
69
6
12
12
1.35
35743--35788
18
2.5
18
85
3
56
63
2
23
10
1.38
37987--38025
15
2.6
16
84
12
55
7
15
2
74
1.15
37992--38045
19
2.7
20
85
8
74
7
12
1
77
1.05
40563--40627
23
2.8
23
81
9
87
30
6
24
38
1.80
44082--44266
79
2.3
81
84
7
236
25
27
22
24
2.00
44082--44266
40
4.7
40
83
7
234
25
27
22
24
2.00
52036--52138
40
2.7
38
75
16
97
24
25
21
29
1.99

Tables:   1

The End!