Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Scaffold3624 Parameters: 2 7 7 80 10 50 1000 Length: 47686

Tables:   1   

This is table  1  of  1  ( 22 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1318--1531
9
24.0
9
73
15
169
34
0
15
49
1.45
1326--1531
35
5.7
35
78
16
183
34
0
15
49
1.45
1327--1522
74
2.8
72
80
13
203
35
0
15
49
1.45
1328--1531
92
2.3
88
84
11
256
35
0
15
49
1.45
1767--1801
17
2.0
18
94
5
63
42
0
5
51
1.25
1767--1800
9
3.9
9
84
7
52
44
0
2
52
1.16
1916--1949
17
1.9
17
88
5
50
52
0
14
32
1.42
1978--2019
17
2.4
18
92
4
68
40
0
11
47
1.40
11840--11896
14
4.1
14
77
6
53
42
12
3
42
1.59
18745--18834
46
1.9
46
88
6
137
17
13
28
40
1.88
21647--21696
17
2.7
20
78
18
70
10
0
44
46
1.37
26274--26323
17
2.7
20
78
18
70
10
0
44
46
1.37
28312--28361
17
2.7
20
78
18
70
10
0
44
46
1.37
32940--32989
17
2.7
20
78
18
70
10
0
44
46
1.37
34037--34090
26
2.1
26
96
0
99
46
20
7
25
1.77
45592--45636
18
2.5
18
96
0
81
48
11
0
40
1.39
45596--45636
9
4.6
9
81
0
55
46
12
0
41
1.41
45658--45691
17
1.9
18
88
5
52
38
5
0
55
1.24
45762--45815
9
6.1
9
82
4
74
48
11
0
40
1.39
45762--45815
17
3.1
17
91
5
81
48
11
0
40
1.39
45755--45813
26
2.2
26
87
3
82
45
13
1
38
1.54
45965--46006
22
1.9
22
95
0
75
35
2
9
52
1.47

Tables:   1   

The End!