Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1075
Parameters: 2 7 7 80 10 50 1000
Length:  47562

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1355--1545
40
4.8
40
90
3
217
27
27
20
24
1.99
1399--1544
40
3.7
40
92
3
224
28
26
20
23
1.99
5991--6214
40
5.7
40
82
7
242
25
21
27
25
1.99
5991--6214
79
2.8
78
82
6
254
25
21
27
25
1.99
6071--6247
79
2.3
79
82
4
198
25
22
28
24
1.99
13966--14136
39
4.3
39
84
6
202
25
21
28
25
1.99
13913--14136
79
2.8
79
82
6
256
25
20
28
25
1.99
13993--14169
79
2.2
80
82
4
200
25
21
28
24
1.99
17829--17871
22
1.9
23
86
13
63
27
4
32
34
1.78
28132--28205
30
2.5
30
86
8
98
20
20
20
39
1.93
30872--30909
20
1.9
19
85
15
51
10
18
28
42
1.83
34071--34117
20
2.3
20
85
0
67
29
36
12
21
1.91
35603--35663
13
4.5
13
78
15
61
73
1
8
16
1.14
35656--35694
17
2.3
17
86
8
53
71
7
15
5
1.26
36727--36834
6
17.7
6
68
6
65
70
2
19
7
1.24
36714--36834
57
2.1
55
82
11
138
69
2
19
8
1.26
36713--36789
18
4.5
17
73
14
68
68
3
18
9
1.31
36795--36832
13
2.8
13
82
17
51
73
0
18
7
1.06
36796--36846
21
2.4
21
74
6
50
74
1
17
5
1.11
36748--36852
27
3.8
27
71
9
77
68
2
20
8
1.29
36915--37020
48
2.2
47
85
9
135
59
1
24
14
1.45
42054--42108
15
3.8
15
85
2
69
1
21
1
74
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44110--44144
17
2.1
17
94
0
61
25
5
5
62
1.40
46845--46891
20
2.3
20
85
0
67
29
36
12
21
1.91

Tables:   1

The End!