Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2031
Parameters: 2 7 7 80 10 50 1000
Length:  41458

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5180--5207
4
7.0
4
100
0
56
25
0
0
75
0.81
12563--12602
18
2.2
18
86
4
53
12
27
0
60
1.33
13662--13695
14
2.4
14
100
0
68
17
11
0
70
1.16
13739--13780
11
3.7
11
90
3
57
14
2
7
76
1.10
13739--13786
12
4.0
12
83
8
53
16
4
10
68
1.33
18084--18144
10
6.1
10
74
12
54
32
13
24
29
1.93
18085--18145
20
3.0
20
83
9
79
32
13
26
27
1.93
20217--20251
18
1.9
18
88
11
54
22
20
0
57
1.41
23074--23128
15
3.8
15
85
2
69
1
21
1
74
1.01
25208--25257
12
4.1
12
89
2
73
20
6
2
72
1.16
27241--27295
15
3.8
14
80
7
65
74
1
21
1
1.01
32135--32186
18
2.8
18
82
8
61
78
5
5
9
1.07
32172--32233
20
3.0
21
81
11
74
77
6
11
4
1.11
33246--33364
6
19.2
6
68
9
69
70
4
19
5
1.25
33314--33370
14
4.3
13
75
16
55
70
1
19
8
1.23
33367--33429
33
1.9
33
84
12
85
53
6
26
12
1.62

Tables:   1

The End!