Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold571
Parameters: 2 7 7 80 10 50 1000
Length:  37045

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3335--3383
10
4.9
10
78
9
55
26
30
16
26
1.97
3335--3381
20
2.3
20
89
7
69
25
31
17
25
1.97
5928--5958
10
3.1
10
95
0
53
12
3
9
74
1.19
8135--8356
102
2.2
101
96
1
408
34
24
21
20
1.97
10960--11003
22
2.0
22
95
0
79
25
36
4
34
1.76
11636--11680
19
2.3
20
84
7
65
77
2
13
6
1.05
12948--12991
22
2.0
22
95
0
79
34
4
36
25
1.76
17259--17300
19
2.2
19
91
0
66
7
11
2
78
1.04
19843--19886
22
2.0
22
95
0
79
34
4
36
25
1.76
23822--24057
45
5.2
45
96
0
427
38
14
20
26
1.91
24036--24069
12
2.8
12
95
0
59
44
2
26
26
1.69
23991--24109
57
2.1
57
90
0
184
40
11
22
25
1.88
28926--29109
40
4.6
40
85
7
178
26
27
22
23
2.00
28929--29109
80
2.3
80
82
9
201
25
27
22
23
2.00
33322--33374
23
2.4
22
76
20
56
9
18
1
69
1.25

Tables:   1

The End!