Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3108
Parameters: 2 7 7 80 10 50 1000
Length:  62817

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1697--1729
7
4.9
7
92
7
59
30
0
12
57
1.35
1697--1729
13
2.4
14
95
5
59
30
0
12
57
1.35
1687--1730
23
1.9
23
82
17
56
29
2
9
59
1.41
2107--2132
11
2.4
11
100
0
52
50
7
42
0
1.31
4005--4032
3
9.3
3
100
0
56
67
0
0
32
0.91
9464--9497
7
4.9
7
96
0
59
29
2
11
55
1.50
11783--11807
3
8.3
3
100
0
50
68
0
0
32
0.90
14558--14583
11
2.4
11
100
0
52
88
0
11
0
0.52
14850--14885
3
12.0
3
93
0
63
0
30
0
69
0.89
19091--19169
40
2.0
40
100
0
158
48
12
0
39
1.41
21263--21348
18
4.5
19
70
12
59
56
6
4
31
1.46
30276--30318
11
3.8
11
80
17
52
30
2
2
65
1.18
30279--30322
23
1.9
23
90
0
70
31
2
4
61
1.28
36902--36955
12
4.3
12
78
17
56
59
3
18
18
1.52
36899--36950
13
4.1
13
78
14
63
61
5
17
15
1.52
38305--38348
22
2.0
22
95
0
79
34
4
52
9
1.54
48888--48943
27
2.1
27
96
0
103
51
3
1
42
1.29
49287--49415
9
13.9
9
69
16
68
62
3
3
31
1.26
49347--49398
19
2.7
19
87
0
59
65
3
1
28
1.21
54795--54861
18
3.7
18
75
13
66
46
2
2
47
1.33
55193--55373
7
25.7
7
80
5
159
14
0
43
41
1.49
55413--55479
18
3.7
18
75
13
66
46
2
2
47
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55811--62817
7
997.1
7
92
5
11109
13
1
42
42
1.51

Tables:   1

The End!