Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1944
Parameters: 2 7 7 80 10 50 1000
Length:  56856

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4632--4670
18
2.1
18
85
9
51
12
28
0
58
1.34
5342--5385
22
1.9
23
86
9
63
18
2
13
65
1.36
6819--6852
14
2.4
14
95
0
59
76
2
5
14
1.09
21408--21462
20
2.8
20
88
0
83
25
29
16
29
1.97
22694--22737
22
2.0
22
95
0
79
34
4
36
25
1.76
24875--24928
12
4.6
12
84
8
67
79
5
1
12
0.98
24969--25040
26
2.6
27
86
6
92
75
1
11
12
1.12
25887--25925
15
2.4
15
87
12
51
66
2
20
10
1.33
27407--27461
20
2.8
20
88
0
83
25
29
16
29
1.97
36778--36961
40
4.6
40
82
6
196
23
20
27
28
1.99
36778--36958
80
2.3
81
83
9
221
23
20
27
27
1.99
43632--43815
40
4.6
40
82
6
196
23
20
27
28
1.99
43632--43812
80
2.3
81
83
9
221
23
20
27
27
1.99
53420--53549
40
3.3
40
86
3
183
28
27
20
23
1.99
53423--53602
80
2.3
80
82
12
203
27
27
21
23
1.99
53423--53602
40
4.5
40
76
13
142
27
27
21
23
1.99

Tables:   1

The End!